Spg029947.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg029947.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RAB GTPase 11C
Location	scaffold6: 13442389 .. 13444798 (-)
Sequence length	795
RNA-Seq Expression	Spg029947.1
Synteny	Spg029947.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGGAGACCCGACGACGACTACGATTATCTCTTCAAAGTTGTTCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTTCTCTCTCTCTTGATTTCTCTCTCATTAGGTATTTATATCTGTCTGTTTATTGTGTTTGTATGCTTTGCATTCTCGATCTATATGTAAATCTGCGTTTCGATTGATATTTTGTTGTAATTCTGATAATGATCTGGTTTCTTTTTCGTTTAGAACGGGCGGTTTTCATTTGAATTCAGTTTGTGAATCGTCTGTTGCGGATCTGTGTTCTCAATTGGTTGTTCTGGTTGTTTTCTTTTTAATTTAGTGAAATGCGGGAAGTTATTCGTCTTTTTATTGCCTTGGATTTGGACGATGAATTAAGAACAATGCTTGTGAATTTGATTAGGTATAACTTTTGATGGATATTATTCAAATTCTGATCTGGGTATGGGTAAGAGATTTCATCCTAACTTTTAATGGAGATACATCTGTAGATCATAATTGGTTGTTTTTATGCCAATAAATTTAGTCCACAGAACTTTAATGCCAAATAGGAATCTGAATTAATGTCTCCTTTTCTGGAAATTCAATTATTATCTAAGTTTTTATTCAAATGTTGATAATGTATCCCACGTTTCTTCCATTCATTCCTTTCCATTTTGATTACGTTTCAAACCATTCGAGAGTAATCCTAAAAAGGACAAGCATTTTACAAATGGTTAAACAATGAAGAAGCATATACAAATCTAGCCGCAACCCTTGATTTACCCTGTAATATGTGGTCATTTAATTACATTTCCTTTTCTTGAACTATGGTTGGTACCTGGAAAATGTTACTTACTTAGTATCCTGTTTCACATATAGACGTCTTGGTAATAGATTTTGGAACTTCTTGGATCATTTTATGCCAATGTCATCTTGAAACGGCTAATAGATGTCAGTGGCACGTTAGTTGAACTGAAATGTTGTAATAATCTGGATCTCTGCAGAATGAGGAAAACTTTTGTAATATCTGTAGTTCTTGTTCTGTTAATAATTTGGATTTCATTTTACTGTGACTTGTAAGCGGAGTAATGTGGAACGCAGTGGTGATTCCTTGCTACATGATTGAAACTGTTTGGTTTTTAGGAGACCAGTTTCTGATTCTTGCATATGAAGATTGCTTTATAAAATCAACAAAACGTTTTTGGATGTACAAACCAAACTGCTTTCTATCATTTGTTCATCTGACATTTTAGCCTTAAGGTGGTTTTTGTGGTTCATTGATGAAGAGATCTCTTTTATTTATTGTGCTCTGTTTATCAAAGTTACCAAGAAAAGAATGCTGCATATTTATTAGGTCGAGGGAAGAACCATAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTATCGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTATGACGTAACAAAGCCAATGACATTCGACAATGTAAGCCGCTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAAACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGACGCACAGAGCTACGCCGAGAAAGAAGGGCTATCGTTCATCGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCCTTCCAAACTATTCTCTCAGAGATATATCGGATAATCAGTAAGAAGTCCCTCAACTCGGATGAGCCTGCTGCTGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCACAAAATATTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTGTCTCTTCTTTGTCATCTGCTTGTTCATTTCTTTCTAGTTACCAAAGATTCTGTCATTTGTTTGCTTGGATTATGTTGATGTATAATTTACATATAATTTATATTTTTTTTCTCATTATGTTACCAGGGGATCATTGAAATCTCTTGTCAGACACCAACGAGCGGTTCATTTCAGAGTCTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATATGTGAATGTCTGGTGGAGTGTTCTTTTCGGATATTTGTGAGTGTCTAACCTACTTGTATCTCAAGTAATTTCGTGGAGGCCTCGTAAGATTTTAAATCTTAGATAGGTGGCTACTATAGTTTAAATATATTCCTTCTAACTTATTCTTTTGTATTAGTTAACGTTCATAGCATTCAAATAACTCAATTCGTAATAATTATTTTTTTAAAAGAAAATACAACTTTATCATTT

mRNA sequence

ATGGCCCGGAGACCCGACGACGACTACGATTATCTCTTCAAAGTTGTTCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTTCTCTCTCTCTTGATTTCTCTCTCATTAGTGAAATGCGGGAAGTTATTCGTCTTTTTATTGCCTTGGATTTGGACGATGAATTAAGAACAATGCTTGTGAATTTGATTAGAATGAGGAAAACTTTTGTAATATCTGTAGTTCTTGTCGAGGGAAGAACCATAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTATCGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTATGACGTAACAAAGCCAATGACATTCGACAATGTAAGCCGCTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAAACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGACGCACAGAGCTACGCCGAGAAAGAAGGGCTATCGTTCATCGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCCTTCCAAACTATTCTCTCAGAGATATATCGGATAATCAGTAAGAAGTCCCTCAACTCGGATGAGCCTGCTGCTGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTAA

Coding sequence (CDS)

ATGGCCCGGAGACCCGACGACGACTACGATTATCTCTTCAAAGTTGTTCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTTCTCTCTCTCTTGATTTCTCTCTCATTAGTGAAATGCGGGAAGTTATTCGTCTTTTTATTGCCTTGGATTTGGACGATGAATTAAGAACAATGCTTGTGAATTTGATTAGAATGAGGAAAACTTTTGTAATATCTGTAGTTCTTGTCGAGGGAAGAACCATAAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTATCGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTATGACGTAACAAAGCCAATGACATTCGACAATGTAAGCCGCTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAAACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGACGCACAGAGCTACGCCGAGAAAGAAGGGCTATCGTTCATCGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCCTTCCAAACTATTCTCTCAGAGATATATCGGATAATCAGTAAGAAGTCCCTCAACTCGGATGAGCCTGCTGCTGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTAA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSLDFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAANIKEGKTIVVGESEANTKKACCSSS

Homology

[Close]

BLAST of Spg029947.1 vs. NCBI nr
Match: KAA0060583.1 (ras-related protein RABA2a isoform X1 [Cucumis melo var. makuwa] >TYK02289.1 ras-related protein RABA2a isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 2.4e-112
Identity = 235/305 (77.05%), Postives = 243/305 (79.67%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR        
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR-------- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLI---------------------------- 120
                  MRE+IR F  LDLDDE R + V+LI                            
Sbjct: 61  -------MRELIRFFTDLDLDDESRKLPVDLISFLVFIDIWEVLYVAHLLIEQCHNLDLY 120

Query: 121 RMRKTFVISVV------------LVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLV 180
           RMR+TFVISV+            LVEGRT+KAQIWDTAGQERYRAITSAYYRGALGALLV
Sbjct: 121 RMRETFVISVLILLKTLVFIFVRLVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLV 180

Query: 181 YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 240
           YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF
Sbjct: 181 YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 240

Query: 241 IETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAA-NIKEGKTIVVGESEANTKKA 265
           IETSALEATNVEKAFQTILSEIYRIISKKSLNS+EP+AA NIKEGKTIVVGESEANTKKA
Sbjct: 241 IETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPSAANNIKEGKTIVVGESEANTKKA 290

[Close]

BLAST of Spg029947.1 vs. NCBI nr
Match: XP_038905598.1 (ras-related protein RABA2a [Benincasa hispida])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 214/264 (81.06%), Postives = 215/264 (81.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRTIKAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTIKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS+EPAAAN
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAAN 215

Query: 241 IKEGKTIVVGESEANTKKACCSSS 265
           IKEGKTIVVGESEANTKKACCSSS
Sbjct: 241 IKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of Spg029947.1 vs. NCBI nr
Match: XP_022989944.1 (ras-related protein RABA2a-like [Cucurbita maxima])

HSP 1 Score: 391.7 bits (1005), Expect = 4.9e-105
Identity = 210/264 (79.55%), Postives = 215/264 (81.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHAD+NIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADANIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAVATEDAQSY+EKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN
Sbjct: 181 LRAVATEDAQSYSEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 215

Query: 241 IKEGKTIVVGESEANTKKACCSSS 265
           IKEGKTIVVGESEAN+KKACCSSS
Sbjct: 241 IKEGKTIVVGESEANSKKACCSSS 215

[Close]

BLAST of Spg029947.1 vs. NCBI nr
Match: KAG6600719.1 (Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031357.1 Ras-related protein RABA2a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.0 bits (1003), Expect = 8.3e-105
Identity = 210/264 (79.55%), Postives = 213/264 (80.68%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPA AN
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPATAN 215

Query: 241 IKEGKTIVVGESEANTKKACCSSS 265
           IKEGKTIVVGESE N+KKACCSSS
Sbjct: 241 IKEGKTIVVGESEGNSKKACCSSS 215

[Close]

BLAST of Spg029947.1 vs. NCBI nr
Match: XP_004133721.1 (ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_009772 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-104
Identity = 213/265 (80.38%), Postives = 215/265 (81.13%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAA- 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS+EPAAA 
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAAN 216

Query: 241 NIKEGKTIVVGESEANTKKACCSSS 265
           NIKEGKTIVVGESEANTKKACCSSS
Sbjct: 241 NIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot
Match: O04486 (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-97
Identity = 196/266 (73.68%), Postives = 206/266 (77.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAA-A 240
           LRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKKS++SD+  A A
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANA 217

Query: 241 NIKEGKTI-VVGESEANTKKACCSSS 265
           NIKEG+TI V   SE+N KK CCSSS
Sbjct: 241 NIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-83
Identity = 170/266 (63.91%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT Q     
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+TIKAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTIKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVIM+ GNK+DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK+L + E AAAN
Sbjct: 181 LRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAAN 217

Query: 241 IK---EGKTIVVGESEANTKKACCSS 264
                +G TI V ++    K+ACCSS
Sbjct: 241 SAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83
Identity = 164/263 (62.36%), Postives = 190/263 (72.24%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+T+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVIM+ GNK+DLKH
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK+L + E ++  
Sbjct: 181 LRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNL 214

Query: 241 IKEGKTIVVGESEANTKKACCSS 264
             +G TI V ++ AN +++CCS+
Sbjct: 241 PGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-82
Identity = 164/263 (62.36%), Postives = 186/263 (70.72%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+T+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVIM+ GNK+DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK+L + E A   
Sbjct: 181 LRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQEAAGNL 214

Query: 241 IKEGKTIVVGESEANTKKACCSS 264
             +G  I + +S A  +K CCS+
Sbjct: 241 PGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-82
Identity = 164/265 (61.89%), Postives = 190/265 (71.70%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+T+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVIM+ GNK+DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDE-PAAA 240
           LRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK+L + E  A A
Sbjct: 181 LRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGA 216

Query: 241 NIK-EGKTIVVGESEANTKKACCSS 264
           ++  +G TI V ++  NTKK CCS+
Sbjct: 241 SVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of Spg029947.1 vs. ExPASy TrEMBL
Match: A0A5D3BW01 (Ras-related protein RABA2a isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00970 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.2e-112
Identity = 235/305 (77.05%), Postives = 243/305 (79.67%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR        
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR-------- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLI---------------------------- 120
                  MRE+IR F  LDLDDE R + V+LI                            
Sbjct: 61  -------MRELIRFFTDLDLDDESRKLPVDLISFLVFIDIWEVLYVAHLLIEQCHNLDLY 120

Query: 121 RMRKTFVISVV------------LVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLV 180
           RMR+TFVISV+            LVEGRT+KAQIWDTAGQERYRAITSAYYRGALGALLV
Sbjct: 121 RMRETFVISVLILLKTLVFIFVRLVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLV 180

Query: 181 YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 240
           YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF
Sbjct: 181 YDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 240

Query: 241 IETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAA-NIKEGKTIVVGESEANTKKA 265
           IETSALEATNVEKAFQTILSEIYRIISKKSLNS+EP+AA NIKEGKTIVVGESEANTKKA
Sbjct: 241 IETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPSAANNIKEGKTIVVGESEANTKKA 290

[Close]

BLAST of Spg029947.1 vs. ExPASy TrEMBL
Match: A0A6J1JQR7 (ras-related protein RABA2a-like OS=Cucurbita maxima OX=3661 GN=LOC111486978 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.4e-105
Identity = 210/264 (79.55%), Postives = 215/264 (81.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHAD+NIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADANIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAVATEDAQSY+EKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN
Sbjct: 181 LRAVATEDAQSYSEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 215

Query: 241 IKEGKTIVVGESEANTKKACCSSS 265
           IKEGKTIVVGESEAN+KKACCSSS
Sbjct: 241 IKEGKTIVVGESEANSKKACCSSS 215

[Close]

BLAST of Spg029947.1 vs. ExPASy TrEMBL
Match: A0A0A0L6P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.3e-105
Identity = 213/265 (80.38%), Postives = 215/265 (81.13%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAA- 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS+EPAAA 
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAAN 216

Query: 241 NIKEGKTIVVGESEANTKKACCSSS 265
           NIKEGKTIVVGESEANTKKACCSSS
Sbjct: 241 NIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Spg029947.1 vs. ExPASy TrEMBL
Match: A0A6J1FQI3 (ras-related protein RABA2a-like OS=Cucurbita moschata OX=3662 GN=LOC111447868 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.9e-105
Identity = 210/264 (79.55%), Postives = 213/264 (80.68%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPA AN
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPATAN 215

Query: 241 IKEGKTIVVGESEANTKKACCSSS 265
           IKEGKTIVVGESE N+KKACCSSS
Sbjct: 241 IKEGKTIVVGESEDNSKKACCSSS 215

[Close]

BLAST of Spg029947.1 vs. ExPASy TrEMBL
Match: A0A1S3BTD1 (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.2e-104
Identity = 212/265 (80.00%), Postives = 215/265 (81.13%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAA- 240
           LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNS+EP+AA 
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPSAAN 216

Query: 241 NIKEGKTIVVGESEANTKKACCSSS 265
           NIKEGKTIVVGESEANTKKACCSSS
Sbjct: 241 NIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Spg029947.1 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-98
Identity = 196/266 (73.68%), Postives = 206/266 (77.44%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEGRT+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGRTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVIMLIGNKTDLKH
Sbjct: 121 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAA-A 240
           LRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKKS++SD+  A A
Sbjct: 181 LRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANA 217

Query: 241 NIKEGKTI-VVGESEANTKKACCSSS 265
           NIKEG+TI V   SE+N KK CCSSS
Sbjct: 241 NIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Spg029947.1 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 311.2 bits (796), Expect = 7.8e-85
Identity = 170/266 (63.91%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT Q     
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+TIKAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTIKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVIM+ GNK+DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK+L + E AAAN
Sbjct: 181 LRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAAN 217

Query: 241 IK---EGKTIVVGESEANTKKACCSS 264
                +G TI V ++    K+ACCSS
Sbjct: 241 SAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Spg029947.1 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 307.0 bits (785), Expect = 1.5e-83
Identity = 164/263 (62.36%), Postives = 186/263 (70.72%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+T+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVIM+ GNK+DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK+L + E A   
Sbjct: 181 LRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQEAAGNL 214

Query: 241 IKEGKTIVVGESEANTKKACCSS 264
             +G  I + +S A  +K CCS+
Sbjct: 241 PGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Spg029947.1 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 304.7 bits (779), Expect = 7.3e-83
Identity = 165/266 (62.03%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSL 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQ     
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 61  DFSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQ 120
                                                       VEG+T+KAQIWDTAGQ
Sbjct: 61  --------------------------------------------VEGKTVKAQIWDTAGQ 120

Query: 121 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKH 180
           ERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVIM+ GNK DL H
Sbjct: 121 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNH 180

Query: 181 LRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAN 240
           LR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK+L + E AAAN
Sbjct: 181 LRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQEAAAAN 217

Query: 241 IK---EGKTIVVGESEANTKKACCSS 264
                +G TI V ++    K+ CCS+
Sbjct: 241 SAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Spg029947.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 276.2 bits (705), Expect = 2.8e-74
Identity = 153/266 (57.52%), Postives = 186/266 (69.92%), Query Frame = 0


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVSLSLD 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V     
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHV----- 62

Query: 62  FSLISEMREVIRLFIALDLDDELRTMLVNLIRMRKTFVISVVLVEGRTIKAQIWDTAGQE 121
                              DD++                         +KAQIWDTAGQE
Sbjct: 63  -------------------DDKI-------------------------VKAQIWDTAGQE 122

Query: 122 RYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHL 181
           RYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM +GNK DL+HL
Sbjct: 123 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHL 182

Query: 182 RAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN-SDEPAAAN 241
           RAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+L+  D+PAA  
Sbjct: 183 RAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA-- 217

Query: 242 IKEGKTIVVGESE---ANTKKACCSS 264
           + +G+TI VG  +   A  K  CCS+
Sbjct: 243 LPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Spg029947.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060583.1	2.4e-112	77.05	ras-related protein RABA2a isoform X1 [Cucumis melo var. makuwa] >TYK02289.1 ras...	[more]
XP_038905598.1	3.4e-106	81.06	ras-related protein RABA2a [Benincasa hispida]	[more]
XP_022989944.1	4.9e-105	79.55	ras-related protein RABA2a-like [Cucurbita maxima]	[more]
KAG6600719.1	8.3e-105	79.55	Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_004133721.1	1.1e-104	80.38	ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein...	[more]

BLAST of Spg029947.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04486	2.3e-97	73.68	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
Q96283	1.1e-83	63.91	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q39434	1.9e-83	62.36	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	2.1e-82	62.36	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q40193	4.6e-82	61.89	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]

BLAST of Spg029947.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW01	1.2e-112	77.05	Ras-related protein RABA2a isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1JQR7	2.4e-105	79.55	ras-related protein RABA2a-like OS=Cucurbita maxima OX=3661 GN=LOC111486978 PE=4...	[more]
A0A0A0L6P8	5.3e-105	80.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
A0A6J1FQI3	6.9e-105	79.55	ras-related protein RABA2a-like OS=Cucurbita moschata OX=3662 GN=LOC111447868 PE...	[more]
A0A1S3BTD1	1.2e-104	80.00	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]

BLAST of Spg029947.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09630.1	1.6e-98	73.68	RAB GTPase 11C	[more]
AT3G46830.1	7.8e-85	63.91	RAB GTPase homolog A2C	[more]
AT1G07410.1	1.5e-83	62.36	RAB GTPase homolog A2B	[more]
AT5G59150.1	7.3e-83	62.03	RAB GTPase homolog A2D	[more]
AT5G60860.1	2.8e-74	57.52	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 13..34 score: 55.2 coord: 200..222 score: 43.68 coord: 103..125 score: 53.03 coord: 165..178 score: 50.58
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..225 e-value: 4.0E-11 score: 40.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 65..260 e-value: 0.0058 score: -5.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..225 e-value: 1.6E-100 score: 349.9
None	No IPR available	PANTHER	PTHR47979:SF18	RAS-RELATED PROTEIN YPTC6	coord: 1..264
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..264
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..223 score: 8.925133
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..261 score: 34.630417
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..223 e-value: 1.0481E-119 score: 337.225
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..221 e-value: 4.3E-10 score: 10.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 98..223 e-value: 1.6E-43 score: 148.1 coord: 14..57 e-value: 2.5E-11 score: 43.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..264 score: 16.713432
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 81..261 e-value: 1.1E-52 score: 180.3 coord: 6..77 e-value: 8.0E-15 score: 56.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..229
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 97..219 e-value: 3.0E-26 score: 90.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg029947	Spg029947	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg029947.1-three_prime_utr	Spg029947.1-three_prime_utr-scaffold6:13442389..13442888	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg029947.1-cds	Spg029947.1-cds-scaffold6:13442889..13443371	CDS
Spg029947.1-cds	Spg029947.1-cds-scaffold6:13443688..13443721	CDS
Spg029947.1-cds	Spg029947.1-cds-scaffold6:13444305..13444385	CDS
Spg029947.1-cds	Spg029947.1-cds-scaffold6:13444602..13444798	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg029947.1	Spg029947.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding