Spg028756.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCGACCTAAAGCCTGATTTATATTTCAAACTGACGCGATGTCTCACTGTGGAAAGTTGCAAGCCGATATTGAAATCAAGGCTCCCCCTTGTAAATTTCTTGAAATGTTCCATAAGAGACCATACCATGTCTCCAATGCTTCTAAAGACAAAATACAAGGTTGTGAGCTACACGAGGGTGATTGGGGCAAAGTTGGTTCTGTCATCTACTGGAACTATTTCCATGGTTTGTCTTCTGCTGAACTTTTTCTCTCTTTTTTAGTTTCTTAATTATCTTTCTTGGTATGCCTTGAATTTGATATGAAGCGCTCCGAATGACCAAGTACGGGGTCTCGCTGATATATAAACCCTCTTAACCTAATTTGCCCTAATCTATGTAATCTGTTTACGTTTTACTCCTCACTAATAAGATCATTCTCTCCTTCTGCCCGTGGACATAGCTAACACACCTTTAGTAAACCACGTAAATTTGTGTGTTGTTTCTTCGCCCTGGATATTAATTGATTTAGTGCTAAATCACAGATGGAAAACCTAAAGTGGCTAAGCAAGTAGTTGAAGTTGTAGATGAGGAGAAGAATTTGATTGTTTTCAGAATGATGGAAGGAGACCTTATGGAGCATCATAAAGCATTCAAGTTTACAATCCAAGCTACTCCCAAGGGTAAGGGAAGTGTGGTTCATTTGACTTTGGAATATGAAAAACTTCACGAAAACATTCCAGATTCATATTCTATGCTGGAGTTTGCTGTCGGCATGTTCAGAGACATTGATGCTCACCTCATCAAAGGCAATTAAGAAGCATGGACCTAAGATTTCTTTCACTCACTAGTGGGGAGAAGAATTTGAATTCTACTATGTTATGTTATGTGTACCAAACTCTATGTTTAAATAAATGCTTGTATATGGCATATGTTGCTTAAAATATATTTCTGAGTATAAATCTATTATTATTAAATTGCAGTATGGG ATGTCTCACTGTGGAAAGTTGCAAGCCGATATTGAAATCAAGGCTCCCCCTTGTAAATTTCTTGAAATGTTCCATAAGAGACCATACCATGTCTCCAATGCTTCTAAAGACAAAATACAAGGTTGTGAGCTACACGAGGGTGATTGGGGCAAAGTTGGTTCTGTCATCTACTGGAACTATTTCCATGATGGAAAACCTAAAGTGGCTAAGCAAGTAGTTGAAGTTGTAGATGAGGAGAAGAATTTGATTGTTTTCAGAATGATGGAAGGAGACCTTATGGAGCATCATAAAGCATTCAAGTTTACAATCCAAGCTACTCCCAAGGGTAAGGGAAGTGTGGTTCATTTGACTTTGGAATATGAAAAACTTCACGAAAACATTCCAGATTCATATTCTATGCTGGAGTTTGCTGTCGGCATGTTCAGAGACATTGATGCTCACCTCATCAAAGGCAATTAA ATGTCTCACTGTGGAAAGTTGCAAGCCGATATTGAAATCAAGGCTCCCCCTTGTAAATTTCTTGAAATGTTCCATAAGAGACCATACCATGTCTCCAATGCTTCTAAAGACAAAATACAAGGTTGTGAGCTACACGAGGGTGATTGGGGCAAAGTTGGTTCTGTCATCTACTGGAACTATTTCCATGATGGAAAACCTAAAGTGGCTAAGCAAGTAGTTGAAGTTGTAGATGAGGAGAAGAATTTGATTGTTTTCAGAATGATGGAAGGAGACCTTATGGAGCATCATAAAGCATTCAAGTTTACAATCCAAGCTACTCCCAAGGGTAAGGGAAGTGTGGTTCATTTGACTTTGGAATATGAAAAACTTCACGAAAACATTCCAGATTCATATTCTATGCTGGAGTTTGCTGTCGGCATGTTCAGAGACATTGATGCTCACCTCATCAAAGGCAATTAA MSHCGKLQADIEIKAPPCKFLEMFHKRPYHVSNASKDKIQGCELHEGDWGKVGSVIYWNYFHDGKPKVAKQVVEVVDEEKNLIVFRMMEGDLMEHHKAFKFTIQATPKGKGSVVHLTLEYEKLHENIPDSYSMLEFAVGMFRDIDAHLIKGN Homology
BLAST of Spg028756.1 vs. NCBI nr
Match: XP_022155376.1 (MLP-like protein 28 [Momordica charantia]) HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64 Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Spg028756.1 vs. NCBI nr
Match: XP_022155190.1 (MLP-like protein 43 [Momordica charantia]) HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64 Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Spg028756.1 vs. NCBI nr
Match: XP_038893059.1 (MLP-like protein 31 [Benincasa hispida]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 113/148 (76.35%), Postives = 128/148 (86.49%), Query Frame = 0
BLAST of Spg028756.1 vs. NCBI nr
Match: KAG6599891.1 (MLP-like protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244.2 bits (622), Expect = 7.3e-61 Identity = 110/151 (72.85%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Spg028756.1 vs. NCBI nr
Match: XP_022941682.1 (MLP-like protein 31 [Cucurbita moschata] >KAG6599893.1 MLP-like protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241.5 bits (615), Expect = 4.7e-60 Identity = 110/151 (72.85%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46 Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.8e-44 Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43 Identity = 80/147 (54.42%), Postives = 105/147 (71.43%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42 Identity = 79/145 (54.48%), Postives = 107/145 (73.79%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.4e-28 Identity = 60/150 (40.00%), Postives = 91/150 (60.67%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy TrEMBL
Match: A0A6J1DRI4 (MLP-like protein 28 OS=Momordica charantia OX=3673 GN=LOC111022522 PE=3 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 8.9e-65 Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy TrEMBL
Match: A0A6J1DLR2 (MLP-like protein 43 OS=Momordica charantia OX=3673 GN=LOC111022325 PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64 Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy TrEMBL
Match: A0A6J1FN63 (MLP-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111446969 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.3e-60 Identity = 110/151 (72.85%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy TrEMBL
Match: A0A6J1JQX2 (MLP-like protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111489019 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 5.1e-60 Identity = 109/147 (74.15%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of Spg028756.1 vs. ExPASy TrEMBL
Match: A0A6J1FST2 (MLP-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111446971 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59 Identity = 107/151 (70.86%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Spg028756.1 vs. TAIR 10
Match: AT1G70840.1 (MLP-like protein 31 ) HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47 Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Spg028756.1 vs. TAIR 10
Match: AT1G70830.2 (MLP-like protein 28 ) HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45 Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of Spg028756.1 vs. TAIR 10
Match: AT1G70830.1 (MLP-like protein 28 ) HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45 Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of Spg028756.1 vs. TAIR 10
Match: AT1G70830.3 (MLP-like protein 28 ) HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45 Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of Spg028756.1 vs. TAIR 10
Match: AT1G70830.5 (MLP-like protein 28 ) HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45 Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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