Spg028244.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg028244.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold2: 45830034 .. 45831482 (+)
Sequence length	1173
RNA-Seq Expression	Spg028244.1
Synteny	Spg028244.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAGACAAGAGGGAGGAAAGAAAGAGATGTTGAGGAGGAGGAAGTGTCGATTACACCTGAGGCACCAAAGACAAGAACGAAGAGAAGGAAGACACCAGAAGAAAGAGAGGCTAAGAGACGAAGAAGGCAACAGCGAGCTGAGGTCGTGGAAGTAGTGCGAAAAGTGGTTGAAGACATCGTTGAAGAAGCGGTTGAGGAAGAACAACCAAAAGATCCTGAAGAAAAGAAAGATTCGGAACAAGACGAACAGACAGTTGCAACTCAGCAAGAGGGACAAGAAAAGTGAGCAAAAGATATGCAAGGGCAAGCTAATGGGCAGAAACAGCAGACTCAAGAAGTTGTGCCAGAGGTACCACGTCGTCGTCATCGCAAGCAAAAGGCGGGACAGATTAAGGTAATCAGGACGGAGACTCCATCTCCGTCAACAATAGAGTCTAAGAAGGAAAATTCTGAAAAAGAAGAGCAAGAGAAAGAAGAGGCTGAGTAGAAAACGGAAGAAGAAGCCCTGACGAAGCAGCAAGAGGACAAGGGCAAAGGAGTTACGGAAGCACCGGCAGAGACAAAGGAGGCTGAGGCCGAGGAGCCAAGACTGTCGTATGATCGCTTCGTCAATGATCTTGCACGAGCAAAATATTTAGAGATGCTGAAGAGGGATTTTCTGTTAAAGAGAGGATTCGGTGATGACCTACCGCATTTCTTACGAGGTGGAATTACAAATCACGGTTGGGAACAGTTTTGCACGAAACCAGAGCCTGTGAATTCGAATGTTGTTCGTGAATTTTACTCGAACATAGAGGAAGAAGAAGGGTTTCAAGCAATTGTTCGTGGGGTAGCAATAGACTGAAGCCCCGGTGCAGTGAATTCTTTATTTAACCTTCAAGATTTCCCACATGCTGGATATAATGAGATGGCGGCAGCGCCATCCAATGAGCAGTTGAATGCAGCTGTTCGAGAGGTGGGAATTGAGGGGGCTCAATGGCGTTTGTCGAAGACAAAGAAAATGACCTTCCAGGCGGCTTATCTCAAAAGTGAAGCCAACACTTGGTTGGGGTTCATCAAACTACACCTACTGCCAACAACCCACGACTCTACTGTTTCCCGTGATCGAGTTCTTCTGGTATTTGCTATTCTGAGGTCATTAAGTATAGATGTAGGAAAAATTATCTCCAATGAAATTCATTCCTATTGGAGGAAGAATGTGGGTAAGCTCTTTTTCCCGAACACAATAACTATGTTGTGTCAAAGAGCTGGGGTTCCCATGAGTGCAGAGGATGTTATTCTGATGGATAAGGGAATAATAGACACACCGAACCTGGCAAGGCTTCAGAGGATTCAGGAAGCACGCCAAGGCGGTTTGGTGAGCGGCATCCACCAAATTCAAGAACAGCTGCAAATGCATTCCAGTCGAATGGAGTTTGCCGAAAGGCAATTCCAAACTTTCTAG

mRNA sequence

ATGACTAAGACAAGAGGGAGGAAAGAAAGAGATGTTGAGGAGGAGGAAGTGTCGATTACACCTGAGGCACCAAAGACAAGAACGAAGAGAAGGAAGACACCAGAAGAAAGAGAGGCTAAGAGACGAAGAAGGCAACAGCGAGCTGAGGTCGTGGAAGTAGTGCGAAAAGTGGTTGAAGACATCGTTGAAGAAGCGGTTGAGGAAGAACAACCAAAAGATCCTGAAGAAAAGAAAGATTCGGAACAAGACGAACAGACAACTCAAGAAGTTGTGCCAGAGGTACCACGTCGTCGTCATCGCAAGCAAAAGGCGGGACAGATTAAGAAAACGGAAGAAGAAGCCCTGACGAAGCAGCAAGAGGACAAGGGCAAAGGAGTTACGGAAGCACCGGCAGAGACAAAGGAGGCTGAGGCCGAGGAGCCAAGACTGTCGTATGATCGCTTCGTCAATGATCTTGCACGAGCAAAATATTTAGAGATGCTGAAGAGGGATTTTCTGTTAAAGAGAGGATTCGGTGATGACCTACCGCATTTCTTACGAGGTGGAATTACAAATCACGGTTGGGAACAGTTTTGCACGAAACCAGAGCCTGTGAATTCGAATGTTGTTCATTTCCCACATGCTGGATATAATGAGATGGCGGCAGCGCCATCCAATGAGCAGTTGAATGCAGCTGTTCGAGAGGTGGGAATTGAGGGGGCTCAATGGCGTTTGTCGAAGACAAAGAAAATGACCTTCCAGGCGGCTTATCTCAAAAGTGAAGCCAACACTTGGTTGGGGTTCATCAAACTACACCTACTGCCAACAACCCACGACTCTACTGTTTCCCGTGATCGAGTTCTTCTGGTATTTGCTATTCTGAGGTCATTAAGTATAGATGTAGGAAAAATTATCTCCAATGAAATTCATTCCTATTGGAGGAAGAATGTGGGTAAGCTCTTTTTCCCGAACACAATAACTATGTTGTGTCAAAGAGCTGGGGTTCCCATGAGTGCAGAGGATGTTATTCTGATGGATAAGGGAATAATAGACACACCGAACCTGGCAAGGCTTCAGAGGATTCAGGAAGCACGCCAAGGCGGTTTGGTGAGCGGCATCCACCAAATTCAAGAACAGCTGCAAATGCATTCCAGTCGAATGGAGTTTGCCGAAAGGCAATTCCAAACTTTCTAG

Coding sequence (CDS)

ATGACTAAGACAAGAGGGAGGAAAGAAAGAGATGTTGAGGAGGAGGAAGTGTCGATTACACCTGAGGCACCAAAGACAAGAACGAAGAGAAGGAAGACACCAGAAGAAAGAGAGGCTAAGAGACGAAGAAGGCAACAGCGAGCTGAGGTCGTGGAAGTAGTGCGAAAAGTGGTTGAAGACATCGTTGAAGAAGCGGTTGAGGAAGAACAACCAAAAGATCCTGAAGAAAAGAAAGATTCGGAACAAGACGAACAGACAACTCAAGAAGTTGTGCCAGAGGTACCACGTCGTCGTCATCGCAAGCAAAAGGCGGGACAGATTAAGAAAACGGAAGAAGAAGCCCTGACGAAGCAGCAAGAGGACAAGGGCAAAGGAGTTACGGAAGCACCGGCAGAGACAAAGGAGGCTGAGGCCGAGGAGCCAAGACTGTCGTATGATCGCTTCGTCAATGATCTTGCACGAGCAAAATATTTAGAGATGCTGAAGAGGGATTTTCTGTTAAAGAGAGGATTCGGTGATGACCTACCGCATTTCTTACGAGGTGGAATTACAAATCACGGTTGGGAACAGTTTTGCACGAAACCAGAGCCTGTGAATTCGAATGTTGTTCATTTCCCACATGCTGGATATAATGAGATGGCGGCAGCGCCATCCAATGAGCAGTTGAATGCAGCTGTTCGAGAGGTGGGAATTGAGGGGGCTCAATGGCGTTTGTCGAAGACAAAGAAAATGACCTTCCAGGCGGCTTATCTCAAAAGTGAAGCCAACACTTGGTTGGGGTTCATCAAACTACACCTACTGCCAACAACCCACGACTCTACTGTTTCCCGTGATCGAGTTCTTCTGGTATTTGCTATTCTGAGGTCATTAAGTATAGATGTAGGAAAAATTATCTCCAATGAAATTCATTCCTATTGGAGGAAGAATGTGGGTAAGCTCTTTTTCCCGAACACAATAACTATGTTGTGTCAAAGAGCTGGGGTTCCCATGAGTGCAGAGGATGTTATTCTGATGGATAAGGGAATAATAGACACACCGAACCTGGCAAGGCTTCAGAGGATTCAGGAAGCACGCCAAGGCGGTTTGGTGAGCGGCATCCACCAAATTCAAGAACAGCTGCAAATGCATTCCAGTCGAATGGAGTTTGCCGAAAGGCAATTCCAAACTTTCTAG

Protein sequence

MTKTRGRKERDVEEEEVSITPEAPKTRTKRRKTPEEREAKRRRRQQRAEVVEVVRKVVEDIVEEAVEEEQPKDPEEKKDSEQDEQTTQEVVPEVPRRRHRKQKAGQIKKTEEEALTKQQEDKGKGVTEAPAETKEAEAEEPRLSYDRFVNDLARAKYLEMLKRDFLLKRGFGDDLPHFLRGGITNHGWEQFCTKPEPVNSNVVHFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITMLCQRAGVPMSAEDVILMDKGIIDTPNLARLQRIQEARQGGLVSGIHQIQEQLQMHSSRMEFAERQFQTF

Homology

[Close]

BLAST of Spg028244.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 106.3 bits (264), Expect = 6.1e-19
Identity = 75/248 (30.24%), Postives = 112/248 (45.16%), Query Frame = 0


Query: 147 RFVNDLARAKYLEMLK-RDFLLKRGFGDD-------LPHFLRGGITNHGWEQFCTKPE-- 206
           +F  + A  +Y   ++ R    ++GF  D       LP F+   IT H W+QFC  PE  
Sbjct: 15  KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74

Query: 207 --------------PVNSNV-------------------VHFPHAGYNEMAAAPSNEQLN 266
                         PV + V                   +  P   ++E     +   L 
Sbjct: 75  IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLI 134

Query: 267 AAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLV 326
             +  V + GA+W +S     T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+
Sbjct: 135 TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLL 194

Query: 327 FAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITMLCQRAGVPMSAEDVILMDKGII 352
            ++L   SI+VG++I +EI +   +  G LFFP+ IT LC+ A  P    +  L + G I
Sbjct: 195 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 254

[Close]

BLAST of Spg028244.1 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-17
Identity = 67/215 (31.16%), Postives = 100/215 (46.51%), Query Frame = 0


Query: 176 PHFLRGGITNHGWEQFCTKP--------------------EPVNSNVVHFPHAG------ 235
           P F+   I  HGW QFC  P                    E V    V  P         
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 236 ---------YNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLG 295
                    Y + A+  ++EQL   + EV IEGA W++S     T     LK  A  W  
Sbjct: 64  FGLEEVVDEYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYH 123

Query: 296 FIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIH--SYWRKNVGKLFFPNT 354
           F+    +P+TH  TV++DRVLL+++IL  +S+++ +I   EI   S  RK  G L+FP+ 
Sbjct: 124 FLTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKR-GGLYFPSL 183

[Close]

BLAST of Spg028244.1 vs. NCBI nr
Match: KAE8705556.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-17
Identity = 62/222 (27.93%), Postives = 108/222 (48.65%), Query Frame = 0


Query: 144 SYDRFVNDLARAKYLEMLKRDFLLKRGF------GDDLPHFLRGGITNHGWEQFCTKPEP 203
           S  RFV+++A  ++  +  R    + GF        DL   +   +  H W +F   P+ 
Sbjct: 87  SQPRFVDEVALERFQNLKNRRVFFELGFVFSNEEVADLGSDVLDIVHQHKWNKFVRHPQN 146

Query: 204 VNSNV-VHFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEAN 263
           +N+++ +   H  + + A    NE  +  +  + +   QW   +    T     L+  A 
Sbjct: 147 MNASLNITDNHTTFTKEA---DNETYHGILENLCLSNIQWNGQQMSHRTVDRERLQPRAK 206

Query: 264 TWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFP 323
            W  F+K  LLP +H++TVS  R+LL+ +I+   SID+GKII  ++H+Y +++   L FP
Sbjct: 207 LWNHFMKYKLLPNSHNTTVSCQRMLLLHSIIVGSSIDIGKIIVEQVHTYLKRHASALVFP 266

Query: 324 NTITMLCQRAGVPMSAEDVILMDKGIIDTPNLARLQRIQEAR 359
           N IT LC++  VP    D I      +    +  L  ++EA+
Sbjct: 267 NLITALCRKKKVPEEQFDEIFHGMTDLIKAKIPMLLGLKEAK 305

[Close]

BLAST of Spg028244.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-17
Identity = 65/209 (31.10%), Postives = 95/209 (45.45%), Query Frame = 0


Query: 178 FLRGGITNHGWEQFCTKPE-PV--------------NSNVVHF----------------- 237
           F+   IT H W+QFC  PE P+                N V+                  
Sbjct: 62  FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFG 121

Query: 238 ---PHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFI 297
              P   ++E     + + L   +  V   GA+W +S     T   + L   A  W  F+
Sbjct: 122 LGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFL 181

Query: 298 KLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITML 352
           K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI +   +  G LFFP+ IT L
Sbjct: 182 KSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRL 241

[Close]

BLAST of Spg028244.1 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-17
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 210 YNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFIKLHLLPT 269
           ++E   A +  +L   +  V I GA+W +S     T   + L   A  W  F+K  LLPT
Sbjct: 36  HSEFVEAITEPELATVLETVAIAGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPT 95

Query: 270 THDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITMLCQRAGVP 329
           TH  TVS++RVLL++++L   SI+VG+II  EI +Y  +  G LFFP+ IT +C  A  P
Sbjct: 96  THGKTVSKERVLLLYSMLTGKSINVGQIIHREICAYAARKSGALFFPSLITRMCCNARAP 155

Query: 330 MSAEDVILMDKGIIDTPNLARL 352
               +  L + G ID   +AR+
Sbjct: 156 YLVNEEKLHNTGEIDAIAVARI 177

[Close]

BLAST of Spg028244.1 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.9e-19
Identity = 75/248 (30.24%), Postives = 112/248 (45.16%), Query Frame = 0


Query: 147 RFVNDLARAKYLEMLK-RDFLLKRGFGDD-------LPHFLRGGITNHGWEQFCTKPE-- 206
           +F  + A  +Y   ++ R    ++GF  D       LP F+   IT H W+QFC  PE  
Sbjct: 15  KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74

Query: 207 --------------PVNSNV-------------------VHFPHAGYNEMAAAPSNEQLN 266
                         PV + V                   +  P   ++E     +   L 
Sbjct: 75  IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLI 134

Query: 267 AAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFIKLHLLPTTHDSTVSRDRVLLV 326
             +  V + GA+W +S     T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+
Sbjct: 135 TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLL 194

Query: 327 FAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITMLCQRAGVPMSAEDVILMDKGII 352
            ++L   SI+VG++I +EI +   +  G LFFP+ IT LC+ A  P    +  L + G I
Sbjct: 195 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 254

[Close]

BLAST of Spg028244.1 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-18
Identity = 67/215 (31.16%), Postives = 100/215 (46.51%), Query Frame = 0


Query: 176 PHFLRGGITNHGWEQFCTKP--------------------EPVNSNVVHFPHAG------ 235
           P F+   I  HGW QFC  P                    E V    V  P         
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 236 ---------YNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLG 295
                    Y + A+  ++EQL   + EV IEGA W++S     T     LK  A  W  
Sbjct: 64  FGLEEVVDEYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYH 123

Query: 296 FIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIH--SYWRKNVGKLFFPNT 354
           F+    +P+TH  TV++DRVLL+++IL  +S+++ +I   EI   S  RK  G L+FP+ 
Sbjct: 124 FLTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKR-GGLYFPSL 183

[Close]

BLAST of Spg028244.1 vs. ExPASy TrEMBL
Match: A0A6A3AN19 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110422pilonHSYRG00071 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.4e-18
Identity = 62/222 (27.93%), Postives = 108/222 (48.65%), Query Frame = 0


Query: 144 SYDRFVNDLARAKYLEMLKRDFLLKRGF------GDDLPHFLRGGITNHGWEQFCTKPEP 203
           S  RFV+++A  ++  +  R    + GF        DL   +   +  H W +F   P+ 
Sbjct: 87  SQPRFVDEVALERFQNLKNRRVFFELGFVFSNEEVADLGSDVLDIVHQHKWNKFVRHPQN 146

Query: 204 VNSNV-VHFPHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEAN 263
           +N+++ +   H  + + A    NE  +  +  + +   QW   +    T     L+  A 
Sbjct: 147 MNASLNITDNHTTFTKEA---DNETYHGILENLCLSNIQWNGQQMSHRTVDRERLQPRAK 206

Query: 264 TWLGFIKLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFP 323
            W  F+K  LLP +H++TVS  R+LL+ +I+   SID+GKII  ++H+Y +++   L FP
Sbjct: 207 LWNHFMKYKLLPNSHNTTVSCQRMLLLHSIIVGSSIDIGKIIVEQVHTYLKRHASALVFP 266

Query: 324 NTITMLCQRAGVPMSAEDVILMDKGIIDTPNLARLQRIQEAR 359
           N IT LC++  VP    D I      +    +  L  ++EA+
Sbjct: 267 NLITALCRKKKVPEEQFDEIFHGMTDLIKAKIPMLLGLKEAK 305

[Close]

BLAST of Spg028244.1 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-17
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 210 YNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFIKLHLLPT 269
           ++E   A +  +L   +  V I GA+W +S     T   + L   A  W  F+K  LLPT
Sbjct: 36  HSEFVEAITEPELATVLETVAIAGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPT 95

Query: 270 THDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITMLCQRAGVP 329
           TH  TVS++RVLL++++L   SI+VG+II  EI +Y  +  G LFFP+ IT +C  A  P
Sbjct: 96  THGKTVSKERVLLLYSMLTGKSINVGQIIHREICAYAARKSGALFFPSLITRMCCNARAP 155

Query: 330 MSAEDVILMDKGIIDTPNLARL 352
               +  L + G ID   +AR+
Sbjct: 156 YLVNEEKLHNTGEIDAIAVARI 177

[Close]

BLAST of Spg028244.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-17
Identity = 65/209 (31.10%), Postives = 95/209 (45.45%), Query Frame = 0


Query: 178 FLRGGITNHGWEQFCTKPE-PV--------------NSNVVHF----------------- 237
           F+   IT H W+QFC  PE P+                N V+                  
Sbjct: 62  FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFG 121

Query: 238 ---PHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTKKMTFQAAYLKSEANTWLGFI 297
              P   ++E     + + L   +  V   GA+W +S     T   + L   A  W  F+
Sbjct: 122 LGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFL 181

Query: 298 KLHLLPTTHDSTVSRDRVLLVFAILRSLSIDVGKIISNEIHSYWRKNVGKLFFPNTITML 352
           K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I +EI +   +  G LFFP+ IT L
Sbjct: 182 KSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRL 241

The following BLAST results are available for this feature:

BLAST of Spg028244.1 vs. NCBI nr


Match Name	E-value	Identity	Description
PON35554.1	6.1e-19	30.24	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
EXB53755.1	1.5e-17	31.16	hypothetical protein L484_022412 [Morus notabilis]	[more]
KAE8705556.1	2.0e-17	27.93	Detected protein of unknown function [Hibiscus syriacus]	[more]
PON46472.1	4.3e-17	31.10	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON62892.1	4.3e-17	38.03	hypothetical protein PanWU01x14_135680 [Parasponia andersonii]	[more]

BLAST of Spg028244.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028244.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5AGA5	2.9e-19	30.24	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
W9QTD9	7.2e-18	31.16	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]
A0A6A3AN19	9.4e-18	27.93	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110422pilon...	[more]
A0A2P5CPE8	2.1e-17	38.03	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE...	[more]
A0A2P5BCG4	2.1e-17	31.10	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of Spg028244.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 366..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg028244	Spg028244	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg028244.1-cds	Spg028244.1-cds-scaffold2:45830034..45830291	CDS
Spg028244.1-cds	Spg028244.1-cds-scaffold2:45830367..45830432	CDS
Spg028244.1-cds	Spg028244.1-cds-scaffold2:45830526..45830811	CDS
Spg028244.1-cds	Spg028244.1-cds-scaffold2:45830920..45831482	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg028244.1	Spg028244.1-protein	polypeptide