Spg026146.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAATTCCACACATCCAAGCTTGAAGAGAGCTCGATGATGGTGTCAACAAAGGTTTTCATGTTCGAGAGATCTTTCGAGCAAACGTTCAATGCAGAGACAACTTTCATGACGTCTAATTCGATTACAAGAAGGATCCGTCACAATTACATGTATCAATTATGCTTTTAATCCCTTCCAAAATTACTTTTGCCTCCAAAGTCTTTGTGTATATGAAAAAGATATAAATAATAAAAATAAAATTACCCTTTAGGTCACTGCTCCTTTTAAGTTTTTAACGTCTGCTTTCAATTTCGAGACTTCAAATTTGAATCACCAACGACCGCAGGGCCATAACATTCAATTCCACGCAACATGCTTCAACACGTGGCAAGTAATTATTGGGTCAAGAATCAACGCGCTAAATAATATTAATTTCCTATTGTGAGCGAAAAGTCGAATGACGCCAATCTGTAAATTTTCAGACCTATGACGTGTCCGATTTTGATTGGAAGTTAATTGGCTCTTCCACGGTCCATCCAAAGGGCAGTTTCGTACTTCAACCTGCCCTTACCTTTCGGTTTATATATAGGGCCCCGATAAAGAATTCTTCTTCCCACCGTCTCTCTTTTCTGTCTGTCGTAGATTCTCGGTGGTGCTCGTTGAAGGTAATCTCCTGTTTCCGAATCTCCTTCTTCTTTTTCATTCCCCTTGTGATGCTGTTGTCTTTCGGATTTTGAGGTTCTTCAATTTCTGATGGCCATTGTTCATTTTCATGAATCTAGAACATATCTGCTTCGATTTCGAATATGAATTAGGCATTTCTGTTGATTAGTGATTTGATATCATCATGAATTGTTCCGATCTGCTTCTTTGGCGAATTTTTTGAGGTTCATTCTTTAATCGGATGCATGAATTTCTTGGAGGAGCTTATTATGAGGTTAATTTCCTGGTCTTAAGTCGATCTGGTATTGCGATGTGATCTACCTTCAGATCCCTTCGAGTGAGCGGGAGGGATGTAATTTTATTGAATCGATGATCCTTAGCTGCTTCATTTTGACGTTCCATTTGATCATTTCGTACTTCGAATAATCTGGATTTCTATACGTAGGATTTTGTTTATTTTCAGATGCGGTGTCGCTATTTTCACTCGATCTTTGTCGCTGTTGTTATCGATCTCATCTGATATATCCTGATGGTGTTGGAATCTTTTAGGGATTTCTAGGCAGAGACAGAATGGGGCTTACGTTCACAAAGCTTTTCAGTCGGCTTTTTGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCGGCCGGTAAGACAACTATCCTCTACAAGCTCAAGCTTGGTGAGATCGTCACAACAATCCCTACCATCGGTGAGTTTCTTTTTCCCTTTTAGAAATGGAGTTATTACACGATCTGCCTTTGATCTGTGTGCCTGTGTACATCTATATAGATAGATCCATATGTTCTTTGAGAAAGAAAGCTCGTAGAAATCTCTCATCTCTGCATTTTATCTGGTTTATTAGATTACTAGGACTCTACCATGGCAATACTCCATGGGTTCAAAATGTTCTTCTGCTCGATAATATACTACACTCGGTTGTTTGTCCATATTATCAGTTGTCTGTCCATATTAAATATTCAACTTCTAACATTGCTTCATCGGGATAATTGTTTACATAAAACCAATAATATAGCTAATGCGGAAATAAAGAGTCAATCACTAGATTGTGACCTTCATTTATGGGGAAGGATTATATAGATGTCAAGCATAACTGCATTCCATTTTCATATGGTCTATCACTGTTCCATGGTTTTACACATTCTTCATGTTGGTTTCACAATTTCCTTCTGCTTAAGCTCTCGGTTGTTTGTTAACTCTACTGTATGAATTATTAAGATTCCTACATCTTATCCAGTTGACTATTGTCTACGTAAAAACAATACACAACAAAGTTGAATTGAAGAGTCAGTTAGCCGATTGTCACCTGGACTGAAATGTCTCTTGACATCCTCTACTCTTTAGCACCTGTTTTATGGAAGATTGCAATTTAGCTTATGTTCTTTATATGCAGGGTTTAATGTGGAGACTGTAGAGTACAAAAACATCAGCTTCACTGTCTGGGATGTTGGAGGTCAAGACAAGGTTTGAACTTCTGTATTGATTGTACTCCAGTCTATTCACACTGCTAGATTGCAGGTTATATTTATTCATTATTTCTAAATGTTTCCTTTATATTCTGTCTAATTAAATTATGTTTTTAAATTTTTGGTCAACAGATCCGTCCCTTGTGGAGGCACTACTTCCAGAACACACAGGGTCTCATATTTGTTGTTGACAGCAATGATAGAGATCGAGTTGTTGAGGCCAGGGATGAATTGCATAGGATGTTGAATGAGGTATTACATACTTCGTTACCTGGTTTGAGCATCTGTTTAAAATCGCTCATGATCCTGCTATCACTTTTTCATGAGTACTGTTCAAATGGTTGCAGATTTACTTTTTTTCTTTTGCTATCTCATTATCCAATTTGAAGCATTCGTAATGCTGTTTTTATTATCCAGTCAGACGTGAATGCATGTCTTTTGTAAAAGATTTATGTGATAGTAATATACCTTTCCCCCCTCGGTGTTTCAATTTATATAGACACAAGACCAAAATCGATTACTAATAATTCATGTGATCCCAGGATGAGCTGCGAGATGCAGTTCTGCTTGTGTTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGATAAGCTGGGTCTCCACTCTCTCCGCCAGCGTCACTGGTAGGCTTTGTTATCCTTATTCTGAATAGAAAATTTTCCTTCTGTTATCTTGCCCTACTCATATTCAAACTACTTGAATATCGTCAGGTACATCCAGAGCACTTGTGCCACCTCTGGAGAGGGACTTTATGAGGGGTTGGATTGGCTCTCCAACAACATTGCTAACAAGGTAAATTATAAACATATCTGGTTCCCAAATCTTGTTTTTCAACAACCCTTCTTCCTCGTTATCCCCCACCCCTCCACAAGGGGCGGGGTAAAAATGAAGAAATCATTACATTTTCTCTTACAGTTACTGCAATCCTGTTGAGACATTATTTACATCTCTATTTTTCTTTTCTATACAGGCATAAGGATATCGAACAGTTGCTTCTGAGACTCGCAGTTCTGGATGCAGGGTGAATATTATCTAATTTTTTCATGGGGCACCTTAAAAGAGGTTATGGTTTTTCTGTTTACGGGAGCTTTTAGCAAACTATTTGTCATTATACTGTAATATCAGAATGGTTAGCTTTGGTTATTGTGTTTCGGGCTCTTTTTTGGGGCTTTACGCGCTGTTCTTTTCTTTTGATTTCTAGCTGAAACTAGTTGATGCATCATTCCATGTTGGATTTGTCTCATAACCCATTCTTTTGTTGCTTCCGTTTCAATTTCATTGCATAAATACCAATAAACAACACTGCGTAATTTAGTGTCA ATGTCGAAATTCCACACATCCAAGCTTGAAGAGAGCTCGATGATGGTGTCAACAAAGGGCCCCGATAAAGAATTCTTCTTCCCACCGTCTCTCTTTTCTGTCTGTCGTAGATTCTCGGTGGTGCTCGTTGAAGTCGATCTGGGATTTCTAGGCAGAGACAGAATGGGGCTTACGTTCACAAAGCTTTTCAGTCGGCTTTTTGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCGGCCGGTAAGACAACTATCCTCTACAAGCTCAAGCTTGGTGAGATCGTCACAACAATCCCTACCATCGGACTCTACCATGGCAATACTCCATGGGTTCAAAATGTTCTTCTGCTCGATAATATACTACACTCGGTTGATGAGCTGCGAGATGCAGTTCTGCTTGTGTTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGATAAGCTGGGTCTCCACTCTCTCCGCCAGCGTCACTGGCATAAGGATATCGAACAGTTGCTTCTGAGACTCGCAGTTCTGGATGCAGGGTGA ATGTCGAAATTCCACACATCCAAGCTTGAAGAGAGCTCGATGATGGTGTCAACAAAGGGCCCCGATAAAGAATTCTTCTTCCCACCGTCTCTCTTTTCTGTCTGTCGTAGATTCTCGGTGGTGCTCGTTGAAGTCGATCTGGGATTTCTAGGCAGAGACAGAATGGGGCTTACGTTCACAAAGCTTTTCAGTCGGCTTTTTGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCGGCCGGTAAGACAACTATCCTCTACAAGCTCAAGCTTGGTGAGATCGTCACAACAATCCCTACCATCGGACTCTACCATGGCAATACTCCATGGGTTCAAAATGTTCTTCTGCTCGATAATATACTACACTCGGTTGATGAGCTGCGAGATGCAGTTCTGCTTGTGTTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGATAAGCTGGGTCTCCACTCTCTCCGCCAGCGTCACTGGCATAAGGATATCGAACAGTTGCTTCTGAGACTCGCAGTTCTGGATGCAGGGTGA MSKFHTSKLEESSMMVSTKGPDKEFFFPPSLFSVCRRFSVVLVEVDLGFLGRDRMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGLYHGNTPWVQNVLLLDNILHSVDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWHKDIEQLLLRLAVLDAG Homology
BLAST of Spg026146.1 vs. NCBI nr
Match: GER51530.1 (ADP-ribosylation factor [Striga asiatica]) HSP 1 Score: 172.6 bits (436), Expect = 3.2e-39 Identity = 97/121 (80.17%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of Spg026146.1 vs. NCBI nr
Match: MQM19275.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 169.5 bits (428), Expect = 2.7e-38 Identity = 91/114 (79.82%), Postives = 97/114 (85.09%), Query Frame = 0
BLAST of Spg026146.1 vs. NCBI nr
Match: GAY46775.1 (hypothetical protein CUMW_099630 [Citrus unshiu]) HSP 1 Score: 169.5 bits (428), Expect = 2.7e-38 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Spg026146.1 vs. NCBI nr
Match: PON52497.1 (Small GTPase superfamily, ARF type [Parasponia andersonii]) HSP 1 Score: 169.5 bits (428), Expect = 2.7e-38 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Spg026146.1 vs. NCBI nr
Match: KAG5059262.1 (hypothetical protein JHK87_000291 [Glycine soja]) HSP 1 Score: 168.7 bits (426), Expect = 4.7e-38 Identity = 93/114 (81.58%), Postives = 98/114 (85.96%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 159.1 bits (401), Expect = 4.9e-38 Identity = 96/154 (62.34%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2) HSP 1 Score: 159.1 bits (401), Expect = 4.9e-38 Identity = 96/154 (62.34%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy Swiss-Prot
Match: O48920 (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3) HSP 1 Score: 156.8 bits (395), Expect = 2.4e-37 Identity = 95/154 (61.69%), Postives = 101/154 (65.58%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy Swiss-Prot
Match: P49076 (ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 5.4e-37 Identity = 95/154 (61.69%), Postives = 101/154 (65.58%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy Swiss-Prot
Match: Q9LQC8 (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2) HSP 1 Score: 154.8 bits (390), Expect = 9.2e-37 Identity = 94/154 (61.04%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy TrEMBL
Match: A0A5A7R1E5 (ADP-ribosylation factor OS=Striga asiatica OX=4170 GN=STAS_28930 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39 Identity = 97/121 (80.17%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy TrEMBL
Match: A0A2P5BUM5 (Small GTPase superfamily, ARF type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_208950 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy TrEMBL
Match: A0A2H5P3V1 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_099630 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38 Identity = 93/115 (80.87%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy TrEMBL
Match: A0A0A0LK50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348280 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38 Identity = 93/118 (78.81%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of Spg026146.1 vs. ExPASy TrEMBL
Match: A0A7J6DN72 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025760 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38 Identity = 93/116 (80.17%), Postives = 99/116 (85.34%), Query Frame = 0
BLAST of Spg026146.1 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B ) HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38 Identity = 95/154 (61.69%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Spg026146.1 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 154.8 bits (390), Expect = 6.5e-38 Identity = 94/154 (61.04%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Spg026146.1 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 ) HSP 1 Score: 154.8 bits (390), Expect = 6.5e-38 Identity = 94/154 (61.04%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Spg026146.1 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F ) HSP 1 Score: 154.8 bits (390), Expect = 6.5e-38 Identity = 94/154 (61.04%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Spg026146.1 vs. TAIR 10
Match: AT1G70490.3 (Ras-related small GTP-binding family protein ) HSP 1 Score: 154.8 bits (390), Expect = 6.5e-38 Identity = 94/154 (61.04%), Postives = 100/154 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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