Spg026083.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg026083.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein ABC transporter 1, mitochondrial
Locationscaffold7: 65912 .. 73242 (+)
Sequence length750
RNA-Seq ExpressionSpg026083.1
SyntenySpg026083.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTGGCGCGTGAGGGCGCGTGGGAGGTTGTTTTTCGCTTCCGTCAGTTGGGTTAGTCTCGGGTAGTGAATTCCGTCAAGTCTGTATAATTGGGTTTGCCAAAACAGGTCACGTTTGCCTCAGTTTGTGTGCTCGACTCGATTTCGGTTCGTTTTGTTGCTCAATTCAGTTCTGTTTTTTCTTTGTGAGGGCACGTTTATGGTTGGAATTTTTTCGGTTGTCATGATTGCTGTTCTTGTGCATCAAGAATTTTTTCCGACTTGTTCTTGTGGTTAGTTTGGCCATAATTGGCTCAAGATAAAAGTTGTTTGGGAAAAGAATTAGGGTTCTTCATAAGAAACTCCATTCAGATCATATTTTCAGAAGTTGTATGGTCATTCGGCTCTAATTTCAAGGTTTTAGATCAGAATTTGTGGTTTCACATTCGATATAGACTTATGGTTGAACAAGAATTCGTAGCAATGTCTAATGTGGTTCACTCGCGGATTCAGCCCATCCATGATTCATCTAAGCAACCATTTGTTATTTCTACTACTGAGTTTGCTAAATTTCAACAGTACCAGAAGTCATTGAAAGCATATTCTTTATCATCCATGCTTACCCCTATTACAACCATTGCTGAGTCAGGTAAAATGAATCATTGTCTTTTTTCCTCCTCTACTAAATGGGTCATAGACTCTGGTGCAACCAATCATATGACAGGTAATCGTGATTTGTTTTCCAATTTTTCTTCATCTACATCCCTTATCGACGTTACTTTGGCAGATGGATCAACATCATCTGTTATTGGATCTGGCACAGTAAATTTAACCCCATCTCTTTCTTTGTCGTCAGTTCTACATTTACCTCAACTTTCCTTTAATTTAATATCTGTTAGTAAACTCACTCATGACCTTAATTGTTGTGTTTCTTTTCATCCGGGCTATTGTTTGTTTCAGGATCTTGTGACGAAGAAGATTATTGGTAGAGGACATGAATCTGGTGGACTTTATATTTTTGATCATCAAGTGCCAAAAGTTGCCTGTTTTGGAGTTGTTTCTCCTTTTGATGCCCATTGCCGTTTAGGTCATCCATCTCTTTCAGTCCTAAGAAAACTTTGTCCTCAATTTCATAACTTGTCTTCATTAAATTGTGATTCATGTCAGTTTGCCAAATTTCATCGTCTTAGCTCCAGTCCTAGAATAGATAATCGAGCAAGTAAGCCCTTCGAATTAGTTCATTCTGATATTTGGGGTCCTTGTCCTATTGTTTCCAAAACTGGATTTCGATACTTTGTTACCTTTGTTGATGATTACTCTCGTAGGACTTAGTTATACTTTATGAAGAGTCGTTCTGAGTTACTTTCTCACTTTTGTAATTTTCATGCTGAAAGTCGAACTCAGTTTGATGTTTCCCTTAAAATTTTGAGAAGCGATAATGCTGGTGAGTACTTTTCTGAAGCACTTAGGTCGTACCTATGTAAGCATGGAATTATTCATCATTCATCTTGTGCTGATACTCCTTCCCAAAATGGAGTTGTTGAACGAAAGAATAGGCATCTCCTTGAAACTGCAAGAGCATTGTCTTTTCAAATGAGTGTTCCAAAGCAATTTTGGGTTGATGCAATTTCTACACCTTGCTTCTTGATTAATCGCATGGCTTCATCTGTACTTAAAGGTCAGATTCCTTATCATGTTCTATTCCCCACAAAACCGTTGTTTCCTATTGAGCCGAAAATATTTGGTTGTACTTGTTTTGTTAGAGATGTTCGTCCTAATCTAACAAAATTAGACCCAAAATCTTTAAAGTGCATTTTCTTAGGCTATTCTCGTGTTCAAAAAGGTTATAGATGTTATTGTCCTAGTTCGAATAGGTATCTTGTATCTCGTGATGTTACTTTCTTTGAGGACACGCCTTTCAAATCATCTTTGCCTAGTACGAACCAGGAGGAGGAGGATGATCTTTTTATTTATACACTTGTACCTCCTACACCCTCTCTCGATCCACCTCCTTCGACACTTGTTCCTACTCGTCCGCCTATTACTCAAGTATACTCTAGACGACAACAACCTCCAGGTGAATGTCTTGTACCACAAGATTCTTCGTCATCGGATCCAGGCACAAGTGATGAGCTTCCTATTGCTCTTCGTAAAGGTAAACGTTCTTGCACTTTTCCTATTTCTTCATTTGTCTCTTATAACCATTTGTCATCTTCTACATGTTCTTTTGTTGCATCTCTTGACTCTATCTCGATTCCTAAAACGGTTCATGAAGCCTTGTCTCATCCTGGTTGGCGCAATGCGATGATAGAAGAGATGAATGCTTTAGATGATAATGGTACCTGGGATTTAGTATCTCGTCTAGTAGGAAAGAAAGCTATCGGGTGTAAATGGGTGTTTGCAATTAAGGTAAATCCTGATGGTTCAGTTGCTCGATTGAAAGCACGTCTTGTTGCCAAAGGCTATGCTCAGACATATGGGATTGATTATTTTGATACGTTTTCTCCTGTTGCTAAATTAACCTCTGTAAGGTTATTCATTTCCATGGTTGCTTCTCAATGTTGGCCTTTGCATCAGCTAGACATTAAAAATGCTTTTCTCCATGGTGATCTTCAAGAGGAAGTCTATATGGAGCAACCACCTGAGTTTGTTGCTCAGGGGGAGAATGGTAAAGTGTGTCGCCTTCGTAAATCTTTATATGGGTTGAAACGAAGTCCACGAGCATGGTTTGGAAAATTCAGTCAGGCACTTGAGCAATTTGGAATGAAGAAAAGCAAGTCGGATCACTCTGTTTTCTACCAACGAACTAAGAGTGGTATTATTCTACTTGTCCTATATGTTGATGATATTGTTATTACTGGAAATGATACATCGGGCATTTCATCTCTCTAAACTTTCCTCCACAGTCAGTTTCATACTAAAGATTTGGGAACATTAAAATACTTCTTGGGTATCGAAGTAATGAGAAGCAAGAAAGGTATCTTTATGTCACAAAGGAAATATGTACTTGATTTGCTATCTGAGACAGGAAAATTAGGAGCCAAGCCATGTAGTACTTCGATGATGCCTAATCTACAACTTACAAAAGATGGTGAACCATTTGATGATCCTGAGAGATATAGAAGATTGGTTGGAAAGTTGAATTATCTTACAGTGACACGACCAGACATAGGTTATTCAGTAAGCATTGTGAGTCAATTTATGTCTTCACCCACAGTGGAACATTGGGCTGCAGTACAACAGATTTTATGTTATTTGAAGGCTGCACCTGGACGTGGGATCCTATATAAAGATCATGGTCACATGAAGATTGAGTGTTTTTCAGATGCTGATTGGGCAGGATCAAGAGAAGATAGAAGATCAACTTCTGGCTATTGTGTTTTTGTTGGAGGCAATCTGGTTTCATGGAAAAGTAAGAAACAAAATGTGGTTTCACGATCAAGTGCTGAATCAGAATACAGAGCTATGACACAATCAGTATGTGAGATAATGTGGGTACATCAACTCTTGATCGAATTAGGTTTCAATGTTACAGTTCCGACCAAGTTGTGGTGTGACAATCAAGCTGCCCTTCATATTGCATCCAACCCAGTATTTCATGAACGGACTAAACATATTGAAATTGATTGTCATTTTATTCGGGAGAAAATACAACAAGGTTTGGTATCTACTGGATATGTGAAGACCGAAGAGCAATTAGGAGATATTTTCACGAAAGCTCTAAATGGAGTTAGAATAGATTATCTTTGTAACAAGTTGGGCATGATTAACATATATGCTCCAACTTGAGGGGAAGTGTTATAGTATGTATGTAAATATAGTAGCTTATTAGTCTTCGTCCTTTATTGTAATTTTACCATTATTTGTTTAGGTCTTCTATGTATGCCTATATATATTTGGCTCTAGTGTGTGGAAAGGATCATGGATTCTCTCATATTTTTGATATCTCAATAACAGTTTCGGTCTTTTCAGGCGTGTTTTCAGAGCTTCCTTCATCTTTTTTGTTCTTCTGGGATGAGCCTTCAGTCATAGTGGATGCCTCATTTGTCTTACTCACAGTAAGCTCTCCTATCAACATTAGCATCCGTTCCATATTTCTCTCTATACTCTTTTCCATTCTCTGCCTTGATTCTTTAATCTCTCTTATCTCCTTCTTTGTTCCCTCTACTCTCTCTTCTAGCTGTTTCTAGGCCATTCTTCGTGTTCTCCTTAGGATCGACGTGCTCTAATACCAATTTTGTTAGGTATCTGATTTAAGAAACATATTAAACACACAAAAAAACACACAACACAGTAAATGGAATGATCCTTCACTGTTCTATTGGGAGTTCTCCAATAGATAGTGAGATATTTATCAGCCGAATATATTGACTTAGCAACCAAACAGGAATACAAAAGGAACCAACCAGCCAATTCAAGAGGACTGGGACTCTCCTAAGACTCTCTAGCCTCAAGCCAAAAACATACCCTCCTCTCACAAAACTTCCCCTTACATATTCTGCTCTCCCTCCCCAGTCCGTGCAACAGGATCCTCTGGCGCATGATCCCAAACGGCCCCCACATTCCCAACATTCTTTCGTTTCTCACGACCTATTCCCATCTTACCCCTCCTTCGGTATGTCCGAGTAATTGGAGGTCTAACAGAAGCCAAGAGAGGAATTGAGCATGTTTCTTATAAAACTCCATTGGGGTGAAGACTTTCCTTCCCTTATTTTGTACGACTATCTTTAGTTTGCATGATATTACTTTGGCCAGGGTTTTGTAGACGTTAGTTATGAAGCTAACCTTGATAGACTTTGATACTTTCAAAGATTCATCTTTCTTAGGGATTATCGTTAAGAAAGTGGTTTAATATTCTCTTATGGATTATGCTCAATGGTAGTCTTAACACTTTTGATGTTTTACAAAGGAGGCTTCCTTCCAATTATCTCATGCCTTTGGTTTGCTCTCTTTGTTGTTCGGATGGGGGTGCTCTGATGTAGGCTTATGTTTAGTGCGGGGTTATTTTAGTTACTGTGGGCTTATGTTTCCTTCCAATTAGTTGGTTATGGTTGTTAGTTTTGTGGCTTAGTTGGTTAGTTTGTGTATAAATATGGCCAAATGGGCTTTCCCTCATTTTACGAGTTGAATTCAATAAGAATCTTGAAGAGTTCTACATCATGTTCTCAATCATGTCTTCTTTGATTGCCCTTATTCTCGAGCTTGTTGGTTCAAGCTATTCTCTTTATTTAATGTTCAGTGGGTATTCTCCAACATCCTCAATGAAAATGTTCTTCTGCTGCTTATTAGCCTTTCTTTGGCTCTTAAGGTCAACTTTATGGGTTAATGCGGTTAAAACTGTCTTATCAAAACTATATAGTTGAAAAGGAACCAAAGGATCTTCCAAAGCAACATCTCTTTTCACTTGATCGATTTGAATGAACTTGTTTAGAAGTCTCATCTTGGTGTTCTCTTTCAAAGCCTTTTGATGAGTTATCTGTACAGAGTATTTGTCTCAATTGGAGTGCTTTTATTATCCTTGGACCTTGGTAACTTTTATTGTTTTTACAGCTTTCATATCACTTTTATGGCTTTTTGTTTCTCTCCCTTGTGGAGTTTGTATCTCTTGAGACTAAAGTCTCAATGAAAAGTTCCGAATCTTGTCAAAACAAAAAGACTAAAGCAAATGGTTGTAGATAATTTTTAGCCTACTTCATATCTTGTTTTAAAATGGTTTTTTTTTTTTTAGTTTTAGAAAAAAAAAATAGTATTTCCCTATCAATTAACTTAGAAGTTCCAACCACCCAAATGCACATTTGCCATTGAGTTTGTTTATGTGGTCATTAGCATGATTAAAGGGTCTACAGTTCAGGCATTAAATCAATGAACATGGTTATCTCTTTGGAAACAATAATTTTGTCTATTTCAGCATCATTTTCCTTTTAAAGTCCAAGATTTTCATGTATATTCCGTAATTTAAATATGTTCCTATCATCTTTCTGTCTTGCCCCAAAGATCTTGGCTGCTCTGGATATTGTACGTCAAGGTGCAGATGTCATGCCTAGGAGCCAGCTGAATCAAGTATTGAACATTGAACTAGGTCAAGATTGGATCTCAAAGTTGATTAGTTTTGATTATGAACCAATGGCTGCTGCAAGTATTGGCCAGGTGCTGCTCAACTACACCATTAATTTCTTTTATGGGTTGCTTACTGGTGGTGTGATGGTATAATGTAAATGGTTTTGTATACTCTTTATGTGAGGGTAGACGACCATGATGTGTCTGAAAAGGGCTAGTCTCAATGTTCGCATAAACCATATAATAGCACACAATCGTGTAATGATCATCTAGCTGCTATGGATCAATAAAAGTGGTTCTTTTTTTTTTTCTCTTTAGGATGAAAGAACCACCTTTATTGATCCATAGCAGCTAGATGATCATTATACGATTGTGTGCCATTATATGGTTTATGTGAACTTTGAGACTAGCCCTTTTCAGACACATCATGGTCGTCTCTTTTATTGATGTCATACTAGCCTCCCCCTACTTCATTATGTTTAGATATTCCTGTTCCTTATTCATTACTGATGTGCCTGAGCTTTACCTTCTCATTTGTTAAGATTGTTTGAATTGTTAGCTGGGCGCTATTTTAAACTGATTCAGGTGCATAGAGCTGTTGCAAAGAATGGAATGAAAGTTGCAATGAAAATTCAGTACCCTGGAGTTGCAGATAGCATTGAGAGTGATATTGATAATGTGAAACTCTTGTTGGATTATACTAATCTGATTCCGAAAGGACTTTATCTTGATAGAGCAATAAAGGTATTTTCTTGTTCTCTTTACTGATTTTTTCAACATGCTTGTGAACTTTGATACTCTTCTTTAATAGCTCTAATTATTGACAAATTATTTTCTATCCTTTGGTTGCCACTCAACATCCCCTTCAATTTTGGTTTACATCTACTGGAAGTTTTAGGATAATAAATGACACATCATAAATGCTGACTTGATTCAAACATGAAGTTTAGATAGGGTGGGTATATGTTAGGTATCTAAGTAGTTGGAGAGCTACACCCCAAAAGTCAGGCAATTGGGGAGGGAGAACCAACCATTTATATACCCCATTAAGAGCCCATATCTTTCTAGTGTGGGACAAAGGCATCCCATACTGCCTTGGTCCCTAACAATTGCCCCTCCTTGGAAAGTCGACGCCTCGACGGCTGTGCACGACGACGCTTCACTCGGCTGGTTCCGGTCAGCCTCTCTAACGCCACTTCTCTTCGGAGCCGTTGACCACCGGCTCTGATACCAATTGTTAGGTATCTAAGTAGTTGGAGAGCCACACCCCAAAAGTCAGGCGATTGGAGATGG

mRNA sequence

ATGCACTGGCGCGTGAGGGCGCGTGGGAGGTTGTTTTTCGCTTCCGTCAGTTGGGGCACGTTTATGGTTGGAATTTTTTCGGTTGTCATGATTGCTGTTCTTGTGCATCAAGAATTTTTTCCGACTTGTTCTTGTGGCGTGTTTTCAGAGCTTCCTTCATCTTTTTTGTTCTTCTGGGATGAGCCTTCAGTCATAGTGGATGCCTCATTTGTCTTACTCACATGGGTATTCTCCAACATCCTCAATGAAAATGTTCTTCTGCTGCTTATTAGCCTTTCTTTGGCTCTTAAGATCTTGGCTGCTCTGGATATTGTACGTCAAGGTGCAGATGTCATGCCTAGGAGCCAGCTGAATCAAGTATTGAACATTGAACTAGGTCAAGATTGGATCTCAAAGTTGATTAGTTTTGATTATGAACCAATGGCTGCTGCAAGTATTGGCCAGGTGCATAGAGCTGTTGCAAAGAATGGAATGAAAGTTGCAATGAAAATTCAGTACCCTGGAGTTGCAGATAGCATTGAGAGTGATATTGATAATGTGAAACTCTTGTTGGATTATACTAATCTGATTCCGAAAGGACTTTATCTTGATAGAGCAATAAAGTGTGGGACAAAGGCATCCCATACTGCCTTGGTCCCTAACAATTGCCCCTCCTTGGAAAGTCGACGCCTCGACGGCTGTGCACGACGACGCTTCACTCGGCTGGTTCCGGTCAGCCTCTCTAACGCCACTTCTCTTCGGAGCCGTTGA

Coding sequence (CDS)

ATGCACTGGCGCGTGAGGGCGCGTGGGAGGTTGTTTTTCGCTTCCGTCAGTTGGGGCACGTTTATGGTTGGAATTTTTTCGGTTGTCATGATTGCTGTTCTTGTGCATCAAGAATTTTTTCCGACTTGTTCTTGTGGCGTGTTTTCAGAGCTTCCTTCATCTTTTTTGTTCTTCTGGGATGAGCCTTCAGTCATAGTGGATGCCTCATTTGTCTTACTCACATGGGTATTCTCCAACATCCTCAATGAAAATGTTCTTCTGCTGCTTATTAGCCTTTCTTTGGCTCTTAAGATCTTGGCTGCTCTGGATATTGTACGTCAAGGTGCAGATGTCATGCCTAGGAGCCAGCTGAATCAAGTATTGAACATTGAACTAGGTCAAGATTGGATCTCAAAGTTGATTAGTTTTGATTATGAACCAATGGCTGCTGCAAGTATTGGCCAGGTGCATAGAGCTGTTGCAAAGAATGGAATGAAAGTTGCAATGAAAATTCAGTACCCTGGAGTTGCAGATAGCATTGAGAGTGATATTGATAATGTGAAACTCTTGTTGGATTATACTAATCTGATTCCGAAAGGACTTTATCTTGATAGAGCAATAAAGTGTGGGACAAAGGCATCCCATACTGCCTTGGTCCCTAACAATTGCCCCTCCTTGGAAAGTCGACGCCTCGACGGCTGTGCACGACGACGCTTCACTCGGCTGGTTCCGGTCAGCCTCTCTAACGCCACTTCTCTTCGGAGCCGTTGA

Protein sequence

MHWRVRARGRLFFASVSWGTFMVGIFSVVMIAVLVHQEFFPTCSCGVFSELPSSFLFFWDEPSVIVDASFVLLTWVFSNILNENVLLLLISLSLALKILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIKCGTKASHTALVPNNCPSLESRRLDGCARRRFTRLVPVSLSNATSLRSR
Homology
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BLAST of Spg026083.1 vs. NCBI nr
Match: XP_038892571.1 (protein ABC transporter 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-47
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVLN+ELGQDW SKLISFDYEPMAAASIGQVHRAV KNG
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLNVELGQDWSSKLISFDYEPMAAASIGQVHRAVTKNG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

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BLAST of Spg026083.1 vs. NCBI nr
Match: XP_022158707.1 (protein ABC transporter 1, mitochondrial [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 4.4e-47
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVLN+ELGQDW +KLISFDYEPMAAASIGQVH+AVAKNG
Sbjct: 254 ILAALDIVRQGADVMPRSQLNQVLNVELGQDWSAKLISFDYEPMAAASIGQVHKAVAKNG 313

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 314 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 357

[Close]
BLAST of Spg026083.1 vs. NCBI nr
Match: XP_004142376.1 (protein ABC transporter 1, mitochondrial [Cucumis sativus] >KAE8648876.1 hypothetical protein Csa_008799 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 8.3e-46
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVLN ELGQDW SKLISFDYEPMAAASIGQVHRAV+K+G
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLNAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           M VAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MNVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

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BLAST of Spg026083.1 vs. NCBI nr
Match: KAG6601681.1 (Protein ABC transporter 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-45
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLN+VLN ELGQDW SKLISFDYEPMAAASIGQVHRAV KNG
Sbjct: 255 ILAALDIVRQGADVMPRSQLNKVLNAELGQDWFSKLISFDYEPMAAASIGQVHRAVLKNG 314

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           MKVAMKIQYPGVADSIESDI+NVKLLLDYTNLIPKGLYLDRA+K
Sbjct: 315 MKVAMKIQYPGVADSIESDINNVKLLLDYTNLIPKGLYLDRAMK 358

[Close]
BLAST of Spg026083.1 vs. NCBI nr
Match: XP_023530440.1 (protein ABC transporter 1, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530448.1 protein ABC transporter 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-45
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLN+VLN ELGQDW SKLISFDYEPMAAASIGQVHRAV KNG
Sbjct: 255 ILAALDIVRQGADVMPRSQLNKVLNAELGQDWSSKLISFDYEPMAAASIGQVHRAVLKNG 314

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           MKVAMKIQYPGVADSIESDI+NVKLLLDYTNLIPKGLYLDRA+K
Sbjct: 315 MKVAMKIQYPGVADSIESDINNVKLLLDYTNLIPKGLYLDRAMK 358

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BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match: Q9SBB2 (Protein ABC transporter 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ABC1 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.4e-40
Identity = 83/104 (79.81%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           IL AL+ VRQGADVMPRSQLN VL+ ELG +W SKL SFDYEP+AAASIGQVHRAV K+G
Sbjct: 258 ILNALEYVRQGADVMPRSQLNPVLDAELGSNWQSKLTSFDYEPLAAASIGQVHRAVTKDG 317

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           ++VAMKIQYPGVA+SIESDI+NV+ LL+YTNLIPKGL+LDRAIK
Sbjct: 318 LEVAMKIQYPGVANSIESDIENVRRLLNYTNLIPKGLFLDRAIK 361

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BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match: Q6AY19 (Atypical kinase COQ8B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq8b PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.1e-22
Identity = 51/97 (52.58%), Postives = 73/97 (75.26%), Query Frame = 0 

Query: 105 VRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKI 164
           VRQ AD MPR Q+ +VL  ELG+DW  K+ S +  P AAASIGQVH+ V K+G +VA+KI
Sbjct: 175 VRQSADFMPRWQMMKVLEEELGKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKI 234

Query: 165 QYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           QYPGVA+SI+SD+ N+  LL  +  +P+GL+ +++++
Sbjct: 235 QYPGVAESIQSDVQNLLALLKMSVGLPEGLFAEQSLQ 271

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BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match: Q92338 (Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=abc1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.7e-22
Identity = 52/110 (47.27%), Postives = 76/110 (69.09%), Query Frame = 0 

Query: 97  KILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRA-VAK 156
           ++   L+ VR GA  MP  QL QV+   LG++W++    FD +PMAAASIGQVHRA +A 
Sbjct: 258 RVSQILERVRDGAHSMPEKQLEQVMVKNLGKNWMTHYSEFDRKPMAAASIGQVHRARLAS 317

Query: 157 NGMKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIKCGTK 206
           N M+V +K+QYPGV  SI+SD++N+  LL  + ++PKGL+L+ ++    K
Sbjct: 318 NHMEVVVKVQYPGVMSSIDSDLNNLAYLLKASRILPKGLFLENSLAAARK 367

[Close]
BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match: Q29RI0 (Atypical kinase COQ8A, mitochondrial OS=Bos taurus OX=9913 GN=COQ8A PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.7e-22
Identity = 52/98 (53.06%), Postives = 69/98 (70.41%), Query Frame = 0 

Query: 103 DIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAM 162
           D VRQ AD MP  Q+ + LN +LG +W  KL  F+  P AAASIGQVH A  K G +VAM
Sbjct: 298 DRVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARLKGGREVAM 357

Query: 163 KIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAI 201
           KIQYPGVA SI SD++N+  +L+ +N++P+GL+ +  I
Sbjct: 358 KIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLI 395

[Close]
BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match: Q60936 (Atypical kinase COQ8A, mitochondrial OS=Mus musculus OX=10090 GN=Coq8a PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 0 

Query: 105 VRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKI 164
           VRQ AD MP  Q+ + LN +LG  W  KL  F+  P AAASIGQVH A  K G +VAMKI
Sbjct: 297 VRQSADFMPLKQMTKTLNSDLGPHWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKI 356

Query: 165 QYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAI 201
           QYPGVA SI SD++N+  +L+ +N++P+GL+ +  I
Sbjct: 357 QYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLI 392

[Close]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match: A0A6J1DXX1 (protein ABC transporter 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111025170 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVLN+ELGQDW +KLISFDYEPMAAASIGQVH+AVAKNG
Sbjct: 254 ILAALDIVRQGADVMPRSQLNQVLNVELGQDWSAKLISFDYEPMAAASIGQVHKAVAKNG 313

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 314 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 357

[Close]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match: A0A0A0KRW6 (ABC1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G626570 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.0e-46
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVLN ELGQDW SKLISFDYEPMAAASIGQVHRAV+K+G
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLNAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           M VAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MNVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

[Close]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match: A0A5A7VJ11 (Protein ABC transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001300 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVL  ELGQDW SKLISFDYEPMAAASIGQVHRAV+K+G
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLKAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           M VAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MNVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

[Close]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match: A0A1S3CMQ0 (protein ABC transporter 1, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502560 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVL  ELGQDW SKLISFDYEPMAAASIGQVHRAV+K+G
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLKAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           M VAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MNVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

[Close]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match: A0A1S3CNT0 (protein ABC transporter 1, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502560 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           ILAALDIVRQGADVMPRSQLNQVL  ELGQDW SKLISFDYEPMAAASIGQVHRAV+K+G
Sbjct: 250 ILAALDIVRQGADVMPRSQLNQVLKAELGQDWSSKLISFDYEPMAAASIGQVHRAVSKDG 309

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           M VAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK
Sbjct: 310 MNVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 353

[Close]
BLAST of Spg026083.1 vs. TAIR 10
Match: AT4G01660.1 (ABC transporter 1 )

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-41
Identity = 83/104 (79.81%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 98  ILAALDIVRQGADVMPRSQLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNG 157
           IL AL+ VRQGADVMPRSQLN VL+ ELG +W SKL SFDYEP+AAASIGQVHRAV K+G
Sbjct: 258 ILNALEYVRQGADVMPRSQLNPVLDAELGSNWQSKLTSFDYEPLAAASIGQVHRAVTKDG 317

Query: 158 MKVAMKIQYPGVADSIESDIDNVKLLLDYTNLIPKGLYLDRAIK 202
           ++VAMKIQYPGVA+SIESDI+NV+ LL+YTNLIPKGL+LDRAIK
Sbjct: 318 LEVAMKIQYPGVANSIESDIENVRRLLNYTNLIPKGLFLDRAIK 361

[Close]
BLAST of Spg026083.1 vs. TAIR 10
Match: AT1G65950.1 (Protein kinase superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0 

Query: 116 QLNQVLNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKIQYPGVADSIES 175
           ++ QVL   LGQ+     +SFD EP+AAASI QVH AV KN  +VA+K+QYPG+  ++  
Sbjct: 148 EIKQVLTSNLGQNLTEIYLSFDEEPIAAASIAQVHHAVLKNHQEVAVKVQYPGLKQNMML 207

Query: 176 D 177
           D
Sbjct: 208 D 208

[Close]
BLAST of Spg026083.1 vs. TAIR 10
Match: AT3G07700.1 (Protein kinase superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 121 LNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKIQYPGVADSIESDIDNV 180
           +  ELG         F+ +P+AAAS+GQVHRAV  NG KV +K+Q PG+    + D+ N+
Sbjct: 245 IEAELGAPISVMYKEFEEQPIAAASLGQVHRAVLHNGEKVVVKVQRPGLKKLFDIDLRNL 304

Query: 181 KLLLDY 187
           KL+ +Y
Sbjct: 305 KLIAEY 310

[Close]
BLAST of Spg026083.1 vs. TAIR 10
Match: AT3G07700.2 (Protein kinase superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 121 LNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKIQYPGVADSIESDIDNV 180
           +  ELG         F+ +P+AAAS+GQVHRAV  NG KV +K+Q PG+    + D+ N+
Sbjct: 245 IEAELGAPISVMYKEFEEQPIAAASLGQVHRAVLHNGEKVVVKVQRPGLKKLFDIDLRNL 304

Query: 181 KLLLDY 187
           KL+ +Y
Sbjct: 305 KLIAEY 310

[Close]
BLAST of Spg026083.1 vs. TAIR 10
Match: AT3G07700.3 (Protein kinase superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 121 LNIELGQDWISKLISFDYEPMAAASIGQVHRAVAKNGMKVAMKIQYPGVADSIESDIDNV 180
           +  ELG         F+ +P+AAAS+GQVHRAV  NG KV +K+Q PG+    + D+ N+
Sbjct: 245 IEAELGAPISVMYKEFEEQPIAAASLGQVHRAVLHNGEKVVVKVQRPGLKKLFDIDLRNL 304

Query: 181 KLLLDY 187
           KL+ +Y
Sbjct: 305 KLIAEY 310

The following BLAST results are available for this feature:
BLAST of Spg026083.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038892571.12.6e-4797.12protein ABC transporter 1, mitochondrial [Benincasa hispida][more]
XP_022158707.14.4e-4796.15protein ABC transporter 1, mitochondrial [Momordica charantia][more]
XP_004142376.18.3e-4695.19protein ABC transporter 1, mitochondrial [Cucumis sativus] >KAE8648876.1 hypothe... [more]
KAG6601681.11.4e-4594.23Protein ABC transporter 1, mitochondrial, partial [Cucurbita argyrosperma subsp.... [more]
XP_023530440.12.4e-4594.23protein ABC transporter 1, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530... [more]
BLAST of Spg026083.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SBB25.4e-4079.81Protein ABC transporter 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ABC1... [more]
Q6AY195.1e-2252.58Atypical kinase COQ8B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq8b PE=1... [more]
Q923388.7e-2247.27Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / A... [more]
Q29RI08.7e-2253.06Atypical kinase COQ8A, mitochondrial OS=Bos taurus OX=9913 GN=COQ8A PE=2 SV=1[more]
Q609361.1e-2153.13Atypical kinase COQ8A, mitochondrial OS=Mus musculus OX=10090 GN=Coq8a PE=1 SV=2[more]
BLAST of Spg026083.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXX12.1e-4796.15protein ABC transporter 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A0A0KRW64.0e-4695.19ABC1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G626570 PE=3 S... [more]
A0A5A7VJ112.0e-4594.23Protein ABC transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3CMQ02.0e-4594.23protein ABC transporter 1, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L... [more]
A0A1S3CNT02.0e-4594.23protein ABC transporter 1, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
BLAST of Spg026083.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01660.13.8e-4179.81ABC transporter 1 [more]
AT1G65950.12.1e-1050.82Protein kinase superfamily protein [more]
AT3G07700.13.0e-0943.94Protein kinase superfamily protein [more]
AT3G07700.23.0e-0943.94Protein kinase superfamily protein [more]
AT3G07700.33.0e-0943.94Protein kinase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004147UbiB domainPFAMPF03109ABC1coord: 124..196
e-value: 1.7E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR43851:SF3LD23884Pcoord: 95..202
IPR034646UbiB domain, ADCK3-likePANTHERPTHR43851FAMILY NOT NAMEDcoord: 95..202

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg026083Spg026083gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg026083.1-cdsSpg026083.1-cds-scaffold7:65912..65965CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:66104..66185CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:69865..69950CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:71132..71200CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:71887..72039CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:72535..72693CDS
Spg026083.1-cdsSpg026083.1-cds-scaffold7:73018..73164CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg026083.1-three_prime_utrSpg026083.1-three_prime_utr-scaffold7:73165..73242three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg026083.1Spg026083.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0015074 DNA integration
biological_process GO:0016310 phosphorylation
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding