Spg025960.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg025960.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	remorin 4.1-like isoform X3
Location	scaffold7: 2744463 .. 2748892 (-)
Sequence length	1056
RNA-Seq Expression	Spg025960.1
Synteny	Spg025960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCCTCCTCTAAGCCACCACAATAATCATTCCTCAGAAGAAATCTCATTGCAGAGCTTTCTTTTCCAACTCCTTTATGGATAATTTGCTCAAACAGATGAGGTTATTGACTCTTTTTTCTTTAGCTTCAAGAAATTTATAGGTTATATATAATTAACAACCAACTTCTATTTCTTTATCTAATCAGGTCGAAGTATACTGGACGGGAGAATAGAGAAGAACGAGACAATAAAAGAGAAAGGTATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGGTAATGTAAAATCCATCACTTAAATTATCATTTTCGTCTTTGTACTTTGAGACTTGATCGTTATAGATTGTTCTCTTCTAATTCTATTATTTTAAATGTTATATATTCTAGTTTTGGTTTGAGCTTTGTGGCCGTATATAGTCATTTTTCTTGAAATAAAAAATATCTTTAAGGTTATCCACGGAATGTTTTCTAATTTTTTTAGGAGGAAGGGTTACGAATAGCATTTGGGGTGTGGGGGTTGAACTTCTGACCTTTTGGTCGATTGTACATGTTATGCTCACTTTGACAAATAATTTTATAAGATGTGTCGAATGTATGACCCGTAAGAACGCTAAAACAAAAACATTGTATAATTAGGATATGTTCACCAAAATTTCATGTAAAAAAAAAATTTAAAAACTTAATTCTTTTTGCAAAAATTAACAGTGAATACTATTTTCAAGACTCATTAAACTTAATTTGAAGCGACGTCGTTTTGAGAAATGTTTGTGGTTTGTGCAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGGCAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGCGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAAGGTTCAAAGACCTCGAGGAGGATATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGGTAACTTTTCCTTTTACATTCCTCCGCAAAAATCATCCCCTACGATAAAAGATTAGTTAATTTTAAAAATATATTAATGTTGAAACTTATTTTGAAAGCAATCTTAAATTTATGAGACCTTAATAATAAAATTAAAAAATTTAGAAAATATAACATTTTATACCCTAAAGAACTAAGCTATTTATATCAAAATTTATTGTCAAAAAAATATTTATATCAAAATTTTAACCTATATTTTCAATTGTATCAATTTCAACCTTACCGTTAAAACAATAGATATCTGATTTACTCCATCCCTACATGTTGTCGAAAAATATAGACATCCGATTGGTTCACTTTTCTAAATACACTTACGAATTTAAACACATAAAAAAAATGTAAAAATATTTTAAAACACACAAATTTCAACCAATTCTACACAAAAGCTATCTGTTCACAAGATCAACAATGGACAAATTTCTCAAAACTTACAAATTAAAAATAAAAGTAAAAAATCTATCTTTTGCAGCAGTTTCTATATATATCAATTACTTTTGTACATGATAATGATATGAGCTTTATAATTCATTAGACACATATAAAAAAAATACTTTTAGCAAATTTAAATTACCTGGGATGAAAATGAAAGTTTGGGTACAATTCGATAATAACCTTAGGAGTAAAATTTGATTTTCATTTTTTTTTTCCCAAAACTTTAAAACTATTGAAACTAAACCAAATTTCCAATTTAACCTTAATTTTATCACAAAACTACGATCTATGATTTTATGTTGTGATATTTAAAAGCCAAAATCTGGATTTGGATGTATTGAGTGAGATTGTTTATGGTTAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAACTCAGGCAGGAAGGTGCCAATGATCTCCGAACAACAAAAACAGAAACCAACAGAAAAAATAAGCGATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACGGAACCAGAAAAACCGGTAGCGGTCCCACTTCCCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCAACTGGGCCGACCGACACACAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACCCAAATCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGGTAATATTCAAAATTTTCTTCTATTGCCAATCAATTTTTTACATTATGTTGTTTTTTAGGTTATATTCGAGGTTGTTCTTTCGACTTATTTAGTTCATATACTTTTAATGAGATAAAAGCATAAATTTAATAGTAATTTTAAAAGGACAATACTTCCCTACTGACTAGGCAGTTGAAAATTCTTGCCGCTCATTATTAAAATTTTCACCACTAAAAAAGTAAACACATGTAAAAAAAACGTAGTCATTGATAATCGGAAACTTTTTCATTTAGTAGGAAAGTGTTTTCTTAAAACAAAAATGTTAATGTGTTTTTTTTCAACTATAACATAAAATTTACTCTTCTTATTCTTATCTTTCTTTATTATTATTTTTTTTTTTTTGAAAAAATTACTCTTCTTATTGTATTTTGTATTAAATTGGATTATTGGTATTTGAATTAGGTTACCATTGTCTTCTCAAAAAAAAAAAAAAAAATTATACTATTTTTGAAAATTGGTAAAACTTTTTTATATATTTGAAATATAACATATTTATATTTTACTATTTATGCAAATACCCATTAAAAAAAAGTACACAAGACATATTGATCGTATTATTGAAGGATGTGATTTCCAAAAGATTCAAATGTTGATAACATAGGCATTAGATCAACCAATAGAGATGTATTAAACTCAAAGTCTAAAAAAAATTAAATAGACAGTCTTAAAAATTCATATACAAATAGGAAATAAAAACTTCTGATTCAAAGGACTAAAACTGGAGAATATTTCAGATTCCAGAAAGTAAACGAGACGATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCCATGCGAAAATTTGAAGAATCACAGGTTCAAGATCTGTTCATCTCTGTTTAAAGTTCGTTCATTAACATTGAAACGATCACAACACTGATTAATTCTGTTCATACATTCGAAGGCTGTGGGAGAGAAAAGGAGGAAGAGAGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGACACGACATTCTCAAAGCCAACCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGAACACTAACAAATTTGTTAAACCACTTCTTTCAATTTCAAACTTCATAACAACTTCGTTGACCATGGATTTGACTGATTTTTTTTCCTTTTTTATCTCTTTTTTTTTTTGAACTATACCGATTGAATGCTTTGTGAACAAAAATAAATCAATAATTCAAGTTGCTTTCAGATGGGTTCTCTGTTTTGCTCTGTTTTTACTCTGTTTTCTTCATTTCACTTGCAGATTTTGCCTAATTTTCATTTTTGTTAAGAATTCGAGATAGAAATCACACGTCTAACATATAAACCGTTAGTAAAACAGATAACATAACTATTAATCTAGCACACACAAATTCATAACAGGTTTAGCAGTGAATGCAAACCCTTATTTACACAGAATTACACAAAAACACATCCACACAAACAGTCATATAAAAGACCCATTTGCGAAAAAGGGTCATTTCTTCAAGAAACCTTCAGCCACCTTCAAATAATCCCCAAACCCAGATCCGCCCTCTTCCTTCTCGCCGGAGTTCTCTTTCTTCGGCGGCTCTTCCGCCTTCGGCTCGCCGCCGGGACCTTGAGGAGCAGAATGAGACTTTTCGTACTGATTGAGATAGTCCTCAGCTTTGTCTACATATTTCCCAACTCCCTTGGTTTCGTCCAATTTTCCGTAATCGGAAGCAGCACCGAGAAGGTCGGCGGCGGCTCCGGCGACTTTGCCCTTGTCCATGTCTTTGCCGCCGCCGCTGAAAGAGGATTTGGCGGCGTCGGCGACCAGCCTGGCGCTGGACAGGAGATCGGAAGCCGATGTCTGGTGGTGGTCTGGATTTTGGTCCTGTGGCTTGTCGGTGGAGCCGCCGAGTTTAGACAAGAAGTCCATGATTGTGAGAGTGGATACAAAACTGAAACGGTTGGATTTTTTGTTTTTTTAATTGAGATTTTTGCGGATACTAATGTTATATAGAGGGAAAAGTGGATATGGGAAAAAAAGAAAATTGAATAAAATTTGAGAAAATGAGTGGCTCGAAAT

mRNA sequence

ATGGATAATTTGCTCAAACAGATGAGGTCGAAGTATACTGGACGGGAGAATAGAGAAGAACGAGACAATAAAAGAGAAAGGTATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGGCAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGCGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAAGGTTCAAAGACCTCGAGGAGGATATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAACTCAGGCAGGAAGGTGCCAATGATCTCCGAACAACAAAAACAGAAACCAACAGAAAAAATAAGCGATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACGGAACCAGAAAAACCGGTAGCGGTCCCACTTCCCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCAACTGGGCCGACCGACACACAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACCCAAATCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGATTCCAGAAAGTAAACGAGACGATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCCATGCGAAAATTTGAAGAATCACAGGCTGTGGGAGAGAAAAGGAGGAAGAGAGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGACACGACATTCTCAAAGCCAACCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGA

Coding sequence (CDS)

ATGGATAATTTGCTCAAACAGATGAGGTCGAAGTATACTGGACGGGAGAATAGAGAAGAACGAGACAATAAAAGAGAAAGGTATTTGACGACTCCACAAAAGTCTCAATCTTTCAGAGAGAAAAAAACGACGGCGCACTGGTTGGGAAGGCAATTTTCGCGGCAAATGAGTCGTGGGAATGAATTTTCCGACGAGGGAATAGAGCATGCAACCGCCGTAGCCGCCGCCGTCTTCGCAATTCGTTCCGTTGAAGATCCAGAAATTGCGAGACCCAAAAAGAATAATGCCGATCGTCCTGAAACGTCGTCGTTCCTAAGGTTCAAAGACCTCGAGGAGGATATTCGCGCCCCCCCTCCAAGGCCGGCGCCGGAACCTGGTAAGGTTTCCCGGCGATTATCAGATAAAGATCTTCTGAGAGATCCTGAAGAAGGCAACTCAGGCAGGAAGGTGCCAATGATCTCCGAACAACAAAAACAGAAACCAACAGAAAAAATAAGCGATCCTTCTTCATCCTTCAAGAAGACAGCTTCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCAGAAGAACGGAACCAGAAAAACCGGTAGCGGTCCCACTTCCCAGGCCTCCAACTCCGCCGGTCTCTCGGAAGCCATCAACTGGGCCGACCGACACACAGAAACCAGGCCCAATCCAAACCAAGCCTGGCCCAACCCAAATCAGGCCTTCTGACCCAAGAGAAATAAAAGCAGATTTGTGGGAAAAGGCTGAAATGGCTAAAATCAAAGAGAGATTCCAGAAAGTAAACGAGACGATTTCATACTGGGAAAGCAAGAAGAGGGAGAAAGCCATGCGAAAATTTGAAGAATCACAGGCTGTGGGAGAGAAAAGGAGGAAGAGAGAAAGAGGAAGAAAGAAGTTCGAGGAAGACATGGAATTCATAAAGCAAATTGCAGGAGAAGCAAGAGCCAAAGCAGATGAAAAACGAAGACACGACATTCTCAAAGCCAACCAAAAAGCAGACATTATCAGACAAACAGGGGACCTCCCTGTTACTTGTTTCTGCTGCTGA

Protein sequence

MDNLLKQMRSKYTGRENREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSSSFKKTASFSGNKPDISGSRRTEPEKPVAVPLPRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTCFCC

Homology

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BLAST of Spg025960.1 vs. NCBI nr
Match: XP_023542546.1 (proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.3 bits (939), Expect = 2.9e-97
Identity = 230/364 (63.19%), Postives = 264/364 (72.53%), Query Frame = 0


Query: 17  NREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAA 76
           +R++R ++ + YL  P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA
Sbjct: 51  DRQQRASRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAA 110

Query: 77  VFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKD 136
            +AI S+++ EIAR KK NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD
Sbjct: 111 AYAIHSIQNSEIARRKK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKD 170

Query: 137 LLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPDISGSRRTEPE 196
           LL+DPEE +  R V +  EQ KQKPTEK +DP +   FK+TA FSGNKPDISGSRRTEPE
Sbjct: 171 LLKDPEE-SPVRNVSVTHEQPKQKPTEKTTDPGNRPYFKETA-FSGNKPDISGSRRTEPE 230

Query: 197 KPVAVPLPRPPTPP----VSRKPSTGP-----------TDTQKPGPI------------Q 256
           KP  +   R   P     +S    T P           T+ +KP  +             
Sbjct: 231 KPSNISGSRRTEPEKPAGISGSRRTEPEKSADISGRRRTEPEKPAVVPRPPTPINRPTDP 290

Query: 257 TKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQA 316
            KP PTQ RP D RE KAD WEKAEMAKI ERF KVNET+SYWE KKR+KAMRK+EESQA
Sbjct: 291 QKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVNETVSYWERKKRDKAMRKYEESQA 350

Query: 317 VGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVT 352
            G KR KRE+GRKKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+
Sbjct: 351 AGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVS 409

[Close]

BLAST of Spg025960.1 vs. NCBI nr
Match: XP_023542547.1 (proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-94
Identity = 228/364 (62.64%), Postives = 262/364 (71.98%), Query Frame = 0


Query: 17  NREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAA 76
           +R++R ++ + YL  P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA
Sbjct: 51  DRQQRASRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAA 110

Query: 77  VFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKD 136
            +AI S+++ EIAR KK NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL   D
Sbjct: 111 AYAIHSIQNSEIARRKK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLI--D 170

Query: 137 LLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPDISGSRRTEPE 196
           LL+DPEE +  R V +  EQ KQKPTEK +DP +   FK+TA FSGNKPDISGSRRTEPE
Sbjct: 171 LLKDPEE-SPVRNVSVTHEQPKQKPTEKTTDPGNRPYFKETA-FSGNKPDISGSRRTEPE 230

Query: 197 KPVAVPLPRPPTPP----VSRKPSTGP-----------TDTQKPGPI------------Q 256
           KP  +   R   P     +S    T P           T+ +KP  +             
Sbjct: 231 KPSNISGSRRTEPEKPAGISGSRRTEPEKSADISGRRRTEPEKPAVVPRPPTPINRPTDP 290

Query: 257 TKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQA 316
            KP PTQ RP D RE KAD WEKAEMAKI ERF KVNET+SYWE KKR+KAMRK+EESQA
Sbjct: 291 QKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVNETVSYWERKKRDKAMRKYEESQA 350

Query: 317 VGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVT 352
            G KR KRE+GRKKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+
Sbjct: 351 AGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVS 407

[Close]

BLAST of Spg025960.1 vs. NCBI nr
Match: XP_022968312.1 (neurofilament medium polypeptide-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 5.2e-94
Identity = 231/383 (60.31%), Postives = 258/383 (67.36%), Query Frame = 0


Query: 17  NREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAA 76
           +R++R  + + YL  P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA
Sbjct: 12  DRQQRGTRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAA 71

Query: 77  VFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKD 136
            +AI S ++ EIAR KK NAD P TSSF +F  L+ED R P PRPAPEP K+SR L DKD
Sbjct: 72  AYAIHSFQNSEIARRKK-NADYPGTSSFPKFTHLKEDNRPPTPRPAPEPAKLSRPLIDKD 131

Query: 137 LLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSS--SFKKTASFSGNKPDISGSRRTEPE 196
           LL+DPEE + GR V +  EQ KQKPTEK +DP S   FK+TA FSGNKPDISGSRRTEPE
Sbjct: 132 LLQDPEE-SPGRNVSVTHEQPKQKPTEKTTDPGSYPYFKETA-FSGNKPDISGSRRTEPE 191

Query: 197 KPV----------AVP------------------------------------LPRPPTPP 256
           KP           A P                                    +PRPPT  
Sbjct: 192 KPEKPSNISGGRRAEPEKPAGISGSQRTEPEKPADISGRRRTEPEKPEKPAVVPRPPT-- 251

Query: 257 VSRKPSTGPTDTQKPGPIQTKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETIS 316
               P T PTD Q       KP PTQ  P D RE KAD WEK EMAKI ERF KV ET+S
Sbjct: 252 ----PFTRPTDPQ-------KPHPTQTIPYDSRETKADQWEKTEMAKINERFHKVIETVS 311

Query: 317 YWESKKREKAMRKFEESQAVGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDI 352
           YWE KKR+KAMRK++ESQA G KR KRE+GRKKFEEDM+FIKQIA EARAKAD KRR+DI
Sbjct: 312 YWERKKRDKAMRKYDESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADRKRRNDI 371

[Close]

BLAST of Spg025960.1 vs. NCBI nr
Match: XP_022945437.1 (uncharacterized protein LOC111449668 isoform X5 [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 1.5e-93
Identity = 223/352 (63.35%), Postives = 254/352 (72.16%), Query Frame = 0


Query: 19  EERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVF 78
           ++R ++ + YL  P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA +
Sbjct: 14  QQRGSRTQTYL-FPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAY 73

Query: 79  AIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLL 138
           AI S+++ EIAR +K NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD L
Sbjct: 74  AIHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHL 133

Query: 139 RDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPD------------ 198
           +DPE+ +  R V +  EQ K+KPTE  +DP S   FK+TA FSGNKPD            
Sbjct: 134 QDPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKP 193

Query: 199 -----ISGSRRTEPEKPVAVPLPRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQIRPSD 258
                ISGSRRTEPEKP  V  PRPPT      P   PTD Q       KP PTQ RP D
Sbjct: 194 EKPSNISGSRRTEPEKPAVV--PRPPT------PFNRPTDPQ-------KPLPTQTRPYD 253

Query: 259 PREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERGR 318
            RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA G KR KRE+G 
Sbjct: 254 SRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGI 313

Query: 319 KKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTCFCC 352
           KKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 KKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 345

[Close]

BLAST of Spg025960.1 vs. NCBI nr
Match: XP_022945435.1 (remorin 4.1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 6.3e-92
Identity = 220/364 (60.44%), Postives = 254/364 (69.78%), Query Frame = 0


Query: 19  EERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVF 78
           ++R ++ + YL  P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA +
Sbjct: 14  QQRGSRTQTYL-FPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAY 73

Query: 79  AIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLL 138
           AI S+++ EIAR +K NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD L
Sbjct: 74  AIHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHL 133

Query: 139 RDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPDISGSRRTEPEKP 198
           +DPE+ +  R V +  EQ K+KPTE  +DP S   FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 QDPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKP 193

Query: 199 VAVP-----------------------------LPRPPTPPVSRKPSTGPTDTQKPGPIQ 258
             +                              +PRPPT      P   PTD Q      
Sbjct: 194 SNISGSRRTETEKPAGISGSRRTEPEKPEKPAVVPRPPT------PFNRPTDPQ------ 253

Query: 259 TKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQA 318
            KP PTQ RP D RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA
Sbjct: 254 -KPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQA 313

Query: 319 VGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVT 352
            G KR KRE+G KKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+
Sbjct: 314 AGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVS 359

[Close]

BLAST of Spg025960.1 vs. ExPASy TrEMBL
Match: A0A6J1HT98 (neurofilament medium polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467581 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 2.5e-94
Identity = 231/383 (60.31%), Postives = 258/383 (67.36%), Query Frame = 0


Query: 17  NREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAA 76
           +R++R  + + YL  P KSQSFRE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA
Sbjct: 12  DRQQRGTRTQTYL-FPLKSQSFRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAA 71

Query: 77  VFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKD 136
            +AI S ++ EIAR KK NAD P TSSF +F  L+ED R P PRPAPEP K+SR L DKD
Sbjct: 72  AYAIHSFQNSEIARRKK-NADYPGTSSFPKFTHLKEDNRPPTPRPAPEPAKLSRPLIDKD 131

Query: 137 LLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSS--SFKKTASFSGNKPDISGSRRTEPE 196
           LL+DPEE + GR V +  EQ KQKPTEK +DP S   FK+TA FSGNKPDISGSRRTEPE
Sbjct: 132 LLQDPEE-SPGRNVSVTHEQPKQKPTEKTTDPGSYPYFKETA-FSGNKPDISGSRRTEPE 191

Query: 197 KPV----------AVP------------------------------------LPRPPTPP 256
           KP           A P                                    +PRPPT  
Sbjct: 192 KPEKPSNISGGRRAEPEKPAGISGSQRTEPEKPADISGRRRTEPEKPEKPAVVPRPPT-- 251

Query: 257 VSRKPSTGPTDTQKPGPIQTKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETIS 316
               P T PTD Q       KP PTQ  P D RE KAD WEK EMAKI ERF KV ET+S
Sbjct: 252 ----PFTRPTDPQ-------KPHPTQTIPYDSRETKADQWEKTEMAKINERFHKVIETVS 311

Query: 317 YWESKKREKAMRKFEESQAVGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDI 352
           YWE KKR+KAMRK++ESQA G KR KRE+GRKKFEEDM+FIKQIA EARAKAD KRR+DI
Sbjct: 312 YWERKKRDKAMRKYDESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADRKRRNDI 371

[Close]

BLAST of Spg025960.1 vs. ExPASy TrEMBL
Match: A0A6J1G0X5 (uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 7.3e-94
Identity = 223/352 (63.35%), Postives = 254/352 (72.16%), Query Frame = 0


Query: 19  EERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVF 78
           ++R ++ + YL  P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA +
Sbjct: 14  QQRGSRTQTYL-FPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAY 73

Query: 79  AIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLL 138
           AI S+++ EIAR +K NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD L
Sbjct: 74  AIHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHL 133

Query: 139 RDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPD------------ 198
           +DPE+ +  R V +  EQ K+KPTE  +DP S   FK+TA FSGNKPD            
Sbjct: 134 QDPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKP 193

Query: 199 -----ISGSRRTEPEKPVAVPLPRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQIRPSD 258
                ISGSRRTEPEKP  V  PRPPT      P   PTD Q       KP PTQ RP D
Sbjct: 194 EKPSNISGSRRTEPEKPAVV--PRPPT------PFNRPTDPQ-------KPLPTQTRPYD 253

Query: 259 PREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERGR 318
            RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA G KR KRE+G 
Sbjct: 254 SRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGI 313

Query: 319 KKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTCFCC 352
           KKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 KKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 345

[Close]

BLAST of Spg025960.1 vs. ExPASy TrEMBL
Match: A0A6J1G0X6 (remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 3.1e-92
Identity = 220/364 (60.44%), Postives = 254/364 (69.78%), Query Frame = 0


Query: 19  EERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVF 78
           ++R ++ + YL  P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA +
Sbjct: 14  QQRGSRTQTYL-FPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAY 73

Query: 79  AIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLL 138
           AI S+++ EIAR +K NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD L
Sbjct: 74  AIHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHL 133

Query: 139 RDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPDISGSRRTEPEKP 198
           +DPE+ +  R V +  EQ K+KPTE  +DP S   FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 QDPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKP 193

Query: 199 VAVP-----------------------------LPRPPTPPVSRKPSTGPTDTQKPGPIQ 258
             +                              +PRPPT      P   PTD Q      
Sbjct: 194 SNISGSRRTETEKPAGISGSRRTEPEKPEKPAVVPRPPT------PFNRPTDPQ------ 253

Query: 259 TKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQA 318
            KP PTQ RP D RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA
Sbjct: 254 -KPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQA 313

Query: 319 VGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVT 352
            G KR KRE+G KKFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+
Sbjct: 314 AGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVS 359

[Close]

BLAST of Spg025960.1 vs. ExPASy TrEMBL
Match: A0A6J1G0U8 (muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 217/351 (61.82%), Postives = 254/351 (72.36%), Query Frame = 0


Query: 19  EERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRGNEFSDEGIEHATAVAAAVF 78
           ++R ++ + YL  P KSQS RE KTTA WLGRQF +QMSRGNEFSD+ IE  TAVAAA +
Sbjct: 14  QQRGSRTQTYL-FPLKSQSSRE-KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAY 73

Query: 79  AIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPPRPAPEPGKVSRRLSDKDLL 138
           AI S+++ EIAR +K NAD PETSSF +F  L+ED R P PRPAPEP K+SRRL DKD L
Sbjct: 74  AIHSIQNSEIARRRK-NADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDHL 133

Query: 139 RDPEEGNSGRKVPMISEQQKQKPTEKISDPSSS--FKKTASFSGNKPDISGSRRTEPEKP 198
           +DPE+ +  R V +  EQ K+KPTE  +DP S   FK+TA FSGNKPD SGSRRT+PEKP
Sbjct: 134 QDPEQ-SQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETA-FSGNKPDTSGSRRTDPEKP 193

Query: 199 VAVPLPRPPTPPVSRKPS----TGPTDTQKPGPI------------QTKPGPTQIRPSDP 258
             +   R        KPS    +  T+ +KP  +              KP PTQ RP D 
Sbjct: 194 SNISGSRRTETEKPEKPSNISGSRRTEPEKPAVVPRPPTPFNRPTDPQKPLPTQTRPYDS 253

Query: 259 REIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERGRK 318
           RE KAD WEKAEMAKI ERF KV ET+SYWE KKR+KA RK++ESQA G KR KRE+G K
Sbjct: 254 RETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIK 313

Query: 319 KFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTCFCC 352
           KFEEDM+FIKQIA EARAKAD+KRR+DILKANQKADIIRQTGDLPV+C CC
Sbjct: 314 KFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 359

[Close]

BLAST of Spg025960.1 vs. ExPASy TrEMBL
Match: A0A1S3BFP8 (FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 213/353 (60.34%), Postives = 258/353 (73.09%), Query Frame = 0


Query: 1   MDNLLKQMRSKY-TGRENREERDNKRERYLTTPQKSQSFREKKTTAHWLGRQFSRQMSRG 60
           MDNLLKQM S+Y   ++NRE + N+ + YL  P KS SFREK+T  +WLGRQFSRQMSRG
Sbjct: 1   MDNLLKQMGSRYPKPQQNREAQSNRTDVYL-APHKSPSFREKRTFGNWLGRQFSRQMSRG 60

Query: 61  NEFSDEGIEHATAVAAAVFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRAPPP 120
           NEFSD+GIE   AVAAAVFAI  VE+ E ++P K   DRP++S+  R + +EED R PPP
Sbjct: 61  NEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLK-KIDRPKSSTLPRIRIVEEDNRTPPP 120

Query: 121 RPAPEPGKVSRRLSDKDLLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSSSFKKTASFS 180
           RPAPEP ++ R  S  D+ ++PEE  +G K    +EQQKQKPT  I+ PS          
Sbjct: 121 RPAPEPDRILRPFS-IDVAKNPEEA-TGEKPAAKTEQQKQKPTGNITFPSPPVVY----- 180

Query: 181 GNKPDISGSR-RTEPEKPVAVPLPRPPTPPVSRKPSTGPTDTQKPGPIQTKPGPTQIRPS 240
               D SG R RTE EKP  +P+PRPPTPP+SRKP T         PIQT+         
Sbjct: 181 ----DYSGDRGRTETEKP--LPIPRPPTPPISRKPPT--------TPIQTR--------- 240

Query: 241 DPREIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERG 300
            P E KADLWEKAE+AKI+ER+QKVNETISYWE+KKREKA+RKFE SQ +G KR +RE+G
Sbjct: 241 -PEETKADLWEKAELAKIQERYQKVNETISYWETKKREKAIRKFEASQVLGTKRSEREKG 300

Query: 301 RKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTCFCC 352
           RKKFEEDMEFIKQIAGEAR+KAD K++++ILKAN+KADIIRQTGDLPV+C+CC
Sbjct: 301 RKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQTGDLPVSCYCC 320

[Close]

BLAST of Spg025960.1 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 128.6 bits (322), Expect = 9.6e-30
Identity = 132/367 (35.97%), Postives = 189/367 (51.50%), Query Frame = 0


Query: 1   MDNLLKQMRSKYTGREN--REERDNKRERYLTTPQKSQSFRE-KKTTAHWLGRQFSRQMS 60
           MD L+KQ R K+   +   RE   + RE+ ++  +KS SF+E KK  ++WL +QFSRQMS
Sbjct: 1   MDTLIKQTRRKHPASQEKIREVGSSTREKKVSA-RKSVSFKEDKKKPSNWLQKQFSRQMS 60

Query: 61  RGNEFSDEG-IEHATAVAAAVFAIRSVEDPEIARPKKNNADRPETSSFLRFKDLEEDIRA 120
            G  +   G ++HA AVAA  +AI + E+  +          P +S   R K   E++  
Sbjct: 61  -GQSYDPIGEMDHAAAVAATAYAIATFEETWLENYHSGLELGPSSS---RSKSRSEEL-- 120

Query: 121 PPPRPAPEPGKVSRRLSDKDLLRDPEEGNSGRKVPMISEQQKQKPTEKISDPSSSFKKTA 180
               P  EP  +SRR S +    D E      K P +    ++         SSS KKT 
Sbjct: 121 ---LPLEEPRSLSRRFSGQLSFIDSE--TKDHKPPTLKSPMRK---------SSSVKKTF 180

Query: 181 SFS-----GNKPDISGSRRTEPEKPVAVPLPR--PP--TPPVSRKPSTGPTDTQKPGPIQ 240
           S +       +   S  +     KPV+ P PR  PP  T    R P   P     P P++
Sbjct: 181 SMNLMGDHTKQNQDSEEKHERQRKPVSEP-PRIQPPLRTRSEPRAPPPPPPPLLSPSPLR 240

Query: 241 TKPGPTQIRPSDPREIK----ADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFE 300
             P  T+ + S+    K    AD WEKAE++KIK R++K+N  I  WE+KKREKA RK +
Sbjct: 241 LPPRETKRQSSEHTSRKDDSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLD 300

Query: 301 ESQAVGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGD 351
            S+   E  ++R+RG ++F ED E+I+QIA  ARA+A++ R+    K  +KA +IR TG 
Sbjct: 301 ISEQ-SELEQRRKRGLQRFREDTEYIEQIAAGARAQAEKDRQSKEFKVKEKAGVIRSTGK 344

[Close]

BLAST of Spg025960.1 vs. TAIR 10
Match: AT1G69325.1 (Remorin family protein )

HSP 1 Score: 62.8 bits (151), Expect = 6.4e-10
Identity = 38/103 (36.89%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 246 DLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRRKRERGRKKFEED 305
           D W++ E++K +++++K++E I  WE KKR+KA RK   ++   EK +   +  ++F ++
Sbjct: 19  DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERSVEKTKL--KATQRFRDE 78

Query: 306 MEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLPVTC 349
            E I+ I   ARA A E R  + LK  +KA+++R TG  P TC
Sbjct: 79  NERIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119

[Close]

BLAST of Spg025960.1 vs. TAIR 10
Match: AT1G67590.1 (Remorin family protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.4e-04
Identity = 45/172 (26.16%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 194 EKPVAVPLPRPPTPPVSRKPSTGPTDTQKPGP-----IQTKPGPTQIRPSDPR------- 253
           ++P     P   T PV R P T P    + G      ++T     ++  ++         
Sbjct: 162 QEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVE 221

Query: 254 --------EIKADLWEKAEMAKIKERFQKVNETISYWESKKREKAMRKFEESQAVGEKRR 313
                   E +A  W++AE AK   R+++    I  WE+ ++ KA  + ++ +   E  R
Sbjct: 222 SKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAE--R 281

Query: 314 KRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKADIIRQTGDLP 346
            + R  +K    +   K+IA E RA A+ K     +K ++KAD IR++G LP
Sbjct: 282 MKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLP 331

[Close]

BLAST of Spg025960.1 vs. TAIR 10
Match: AT5G61280.1 (Remorin family protein )

HSP 1 Score: 43.1 bits (100), Expect = 5.3e-04
Identity = 36/134 (26.87%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 217 PTDTQKPGPIQTKPGPTQIRPSDPREIKADLWEKAEMAKIKERFQKVNETISYWESKKRE 276
           P++ ++P  I +  G + +  +     KAD WEK+++ KI+ R++K+   I  WE++++ 
Sbjct: 131 PSENRRPQEIGSSSGTSGLASASS---KADSWEKSQIKKIRLRYEKMKADIVGWENERKL 190

Query: 277 KAMRKFEESQAVGEKRRKRERGRKKFEEDMEFIKQIAGEARAKADEKRRHDILKANQKAD 336
            A    E+ ++  EKR  +    + ++  +  I+ IA  A+ + +EKRR    + + K  
Sbjct: 191 AATLLMEKRKSELEKR--KGINNQHYKSKLARIQLIADGAKKQLEEKRRSKEAQVHGKVK 250

Query: 337 IIRQTGDLPVTCFC 351
            + +TG +P   FC
Sbjct: 251 KMSRTGKVPNNYFC 259

The following BLAST results are available for this feature:

BLAST of Spg025960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542546.1	2.9e-97	63.19	proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023542547.1	1.4e-94	62.64	proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022968312.1	5.2e-94	60.31	neurofilament medium polypeptide-like isoform X1 [Cucurbita maxima]	[more]
XP_022945437.1	1.5e-93	63.35	uncharacterized protein LOC111449668 isoform X5 [Cucurbita moschata]	[more]
XP_022945435.1	6.3e-92	60.44	remorin 4.1-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Spg025960.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HT98	2.5e-94	60.31	neurofilament medium polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1G0X5	7.3e-94	63.35	uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G0X6	3.1e-92	60.44	remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 S...	[more]
A0A6J1G0U8	1.2e-91	61.82	muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3...	[more]
A0A1S3BFP8	1.2e-91	60.34	FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1	[more]

BLAST of Spg025960.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13920.1	9.6e-30	35.97	Remorin family protein	[more]
AT1G69325.1	6.4e-10	36.89	Remorin family protein	[more]
AT1G67590.1	2.4e-04	26.16	Remorin family protein	[more]
AT5G61280.1	5.3e-04	26.87	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 241..346 e-value: 2.1E-21 score: 75.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..29
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 3..351
None	No IPR available	PANTHER	PTHR31471:SF51	REMORIN FAMILY PROTEIN	coord: 3..351

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg025960	Spg025960	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg025960.1-three_prime_utr	Spg025960.1-three_prime_utr-scaffold7:2744463..2745474	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2745475..2745672	CDS
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2745761..2745842	CDS
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2746617..2746992	CDS
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2747825..2748106	CDS
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2748611..2748702	CDS
Spg025960.1-cds	Spg025960.1-cds-scaffold7:2748788..2748813	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg025960.1-five_prime_utr	Spg025960.1-five_prime_utr-scaffold7:2748814..2748892	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg025960.1	Spg025960.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042221	response to chemical