Spg024958.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGACGCAGAATCTGAGGCAAGGGAATCATTCGTGGGTTTTGTTGCATTTAAGCGATTTCTTGAAGATTTTGGGTGTTTTCCATTGTTCAAGCGTGGGTAAAGCGATTTTTCTCTTCTTCTTCTTCTCTTTACTTGATTTTTCCATGTCTAGATGCATTTGGTTAAGACTAGAAGTTGAATGGGCTTGATTTGAGCATGATTTTTACATTTTCTAGCTGAAAATCGTTGAGAATATTGTTGTGGCTGCTGTATTTTTATTGTTTGTGTAAATTTTCTGCTATTTTTGTTGGGAGTTTGCTGTTTGGCAGGTTAAAATTTGTTCATAAGGAGGAAGGGATTTTAAGTTTTGGAGATTTTGGACCCATTGATCTTGAGTCCTTAGTTTTCTTAGCTTCCAACCTATCTTAGACTCTTTTTTTTAGGAACCCATTTTTCCTATTCCCTTTAGATTTTTCATACTCTTCCTACCCATTCCACCATGAGCACCAAGAGATCTAGGAGCTCAACAGCTCGTTCATCCTCTGCTCCCTTTGATAAAAGAAGATTTATTAGCAAGGATGCTGAAGATGTATATAACTCTTATGTGGTAAGTAGGGGGTAGTTCCTGAGGGAGGGTTAGTTCCAAGTGCCCAAAACCAACCTGAGCTCACCCAAAGTATAGCTGAGAGAGGTTGGGGTACGTTCACTAGGCACCCCCAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTACGCTAACATGACGAAAGGATCCACTACTTCCTTTGTTAGGGATAAAATGATCCATTTCGACTCGGCCTCTATTAACCAATCCTATGGCCTTCACAATATTGATAGGGATGGGTACAATGATTATGCAAGTAATCACTTTAATGCCCATCAAATTATAGAGCATCTATGTAGGCCAGGGGCAACTTGGTTAATAAGAATGGGTGAAGCAATAAACTTTAAATCCTCTAATCTGACAGAGGATAACAGAGCATGACATAGTTTTCTGTGTGCCAAACTCTTACCTGTGATACATTTGAGTGATGTAACGAAGGAAAGAGCAGCTCTATTATTCGATGTAGCGGTCGGGCGTAGTGTAGACATAGGGAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGAGGAGCGACCACCGTAGGTCTAGGGCACCCTTCCCTCATCACAACACTCTGCAGAGTCGCTAGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTACAGTTGGGATTGATGGGAACTTCATCATGATTAGATTTAGGGAGCCTAGACTTAGGATGCCCGCCTACCACCTCCACCCCAACAGGAAGAACCAGAAGAGGAGCCCCAAGCTCAAGGAGAGCAGCCCCACTTCGATCATCCTCCTCTCACGCTTGAGGCGTTAG ATGCCGACGCAGAATCTGAGGCAAGGGAATCATTCGTGGGTTTTGTTGCATTTAAGCGATTTCTTGAAGATTTTGGGTGTTTTCCATTGTTCAAGCGTGGGTAAAGCGATTTTTCTCTTCTTCTTCTTCTCTTTACTTGATTTTTCCATGTTAAAATTTGTTCATAAGGAGGAAGGGATTTTAAGTTTTGGAGATTTTGGACCCATTGATCTTGAGTCCTTAGGGGTAGTTCCTGAGGGAGGGTTAGTTCCAAGTGCCCAAAACCAACCTGAGCTCACCCAAAGTATAGCTGAGAGAGGTTGGGGTACGTTCACTAGGCACCCCCAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTACGCTAACATGACGAAAGGATCCACTACTTCCTTTGTTAGGGATAAAATGATCCATTTCGACTCGGCCTCTATTAACCAATCCTATGGCCTTCACAATATTGATAGGGATGGGTACAATGATTATGCAAGTAATCACTTTAATGCCCATCAAATTATAGAGCATCTATGTAGGCCAGGGGCAACTTGTGATGTAACGAAGGAAAGAGCAGCTCTATTATTCGATGTAGCGGTCGGGCGTAGTGTAGACATAGGGAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGAGGAGCGACCACCGTAGGTCTAGGGCACCCTTCCCTCATCACAACACTCTGCAGAGTCGCTAGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTACAGTTGGGATTGATGGGAACTTCATCATGATTAGATTTAGGGAGCCTAGACTTAGGATGCCCGCCTACCACCTCCACCCCAACAGGAAGAACCAGAAGAGGAGCCCCAAGCTCAAGGAGAGCAGCCCCACTTCGATCATCCTCCTCTCACGCTTGAGGCGTTAG ATGCCGACGCAGAATCTGAGGCAAGGGAATCATTCGTGGGTTTTGTTGCATTTAAGCGATTTCTTGAAGATTTTGGGTGTTTTCCATTGTTCAAGCGTGGGTAAAGCGATTTTTCTCTTCTTCTTCTTCTCTTTACTTGATTTTTCCATGTTAAAATTTGTTCATAAGGAGGAAGGGATTTTAAGTTTTGGAGATTTTGGACCCATTGATCTTGAGTCCTTAGGGGTAGTTCCTGAGGGAGGGTTAGTTCCAAGTGCCCAAAACCAACCTGAGCTCACCCAAAGTATAGCTGAGAGAGGTTGGGGTACGTTCACTAGGCACCCCCAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTACGCTAACATGACGAAAGGATCCACTACTTCCTTTGTTAGGGATAAAATGATCCATTTCGACTCGGCCTCTATTAACCAATCCTATGGCCTTCACAATATTGATAGGGATGGGTACAATGATTATGCAAGTAATCACTTTAATGCCCATCAAATTATAGAGCATCTATGTAGGCCAGGGGCAACTTGTGATGTAACGAAGGAAAGAGCAGCTCTATTATTCGATGTAGCGGTCGGGCGTAGTGTAGACATAGGGAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGAGGAGCGACCACCGTAGGTCTAGGGCACCCTTCCCTCATCACAACACTCTGCAGAGTCGCTAGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTACAGTTGGGATTGATGGGAACTTCATCATGATTAGATTTAGGGAGCCTAGACTTAGGATGCCCGCCTACCACCTCCACCCCAACAGGAAGAACCAGAAGAGGAGCCCCAAGCTCAAGGAGAGCAGCCCCACTTCGATCATCCTCCTCTCACGCTTGAGGCGTTAG MPTQNLRQGNHSWVLLHLSDFLKILGVFHCSSVGKAIFLFFFFSLLDFSMLKFVHKEEGILSFGDFGPIDLESLGVVPEGGLVPSAQNQPELTQSIAERGWGTFTRHPQAAVVPIVREFYANMTKGSTTSFVRDKMIHFDSASINQSYGLHNIDRDGYNDYASNHFNAHQIIEHLCRPGATCDVTKERAALLFDVAVGRSVDIGKVIYSSMRRIRRGATTVGLGHPSLITTLCRVARVVWDPREEISHPTVGIDGNFIMIRFREPRLRMPAYHLHPNRKNQKRSPKLKESSPTSIILLSRLRR Homology
BLAST of Spg024958.1 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 2.7e-43 Identity = 101/221 (45.70%), Postives = 127/221 (57.47%), Query Frame = 0
BLAST of Spg024958.1 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 2.3e-42 Identity = 99/221 (44.80%), Postives = 127/221 (57.47%), Query Frame = 0
BLAST of Spg024958.1 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36 Identity = 90/199 (45.23%), Postives = 112/199 (56.28%), Query Frame = 0
BLAST of Spg024958.1 vs. NCBI nr
Match: PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus]) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-16 Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 0
BLAST of Spg024958.1 vs. NCBI nr
Match: PIN07564.1 (hypothetical protein CDL12_19862 [Handroanthus impetiginosus]) HSP 1 Score: 95.5 bits (236), Expect = 8.3e-16 Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 0
BLAST of Spg024958.1 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.2e-45 Identity = 98/190 (51.58%), Postives = 125/190 (65.79%), Query Frame = 0
BLAST of Spg024958.1 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.3e-43 Identity = 101/221 (45.70%), Postives = 127/221 (57.47%), Query Frame = 0
BLAST of Spg024958.1 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42 Identity = 99/221 (44.80%), Postives = 127/221 (57.47%), Query Frame = 0
BLAST of Spg024958.1 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.4e-37 Identity = 90/199 (45.23%), Postives = 112/199 (56.28%), Query Frame = 0
BLAST of Spg024958.1 vs. ExPASy TrEMBL
Match: A0A2G9G807 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 8.1e-17 Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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