Spg024951.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg024951.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold12: 8123409 .. 8128957 (+)
Sequence length	3204
RNA-Seq Expression	Spg024951.1
Synteny	Spg024951.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGATGCACTGCTTGAGGGTTGGAAGAAGTTCAATTTGACTGCAGCGGAGGAAGAGGTTGCAGTGGATATTGATTCTGTCGCGGTTCTAGATGCCAAGGCCCAGATGTCTAACTGCCTCGCTGTGAAGCTTCTCGCGTCGCGTCCCATTGCCTGTGATGTAATTCGAAGGACTATGGCTATTGCTTGGCGGGTTGAGTCGGGGCTGTCTGTCGAGAAATTGGGTAAGAATATGTTTCTGTTCTTGTTTGACAGGGCTGTGGATTGCGTTCGGGTTCTCCGTTCGGGACCGTGGTACTTTGATAAATTCTTGTTTGTTATTGAGAGGCTGAATACATTGATCAAGCCATCTGAGATGCGTTTTAATATGGTGGCATTCTGGGTCCATTTTTTTGATCTCCCTGTTGGTTGTATGAATCCTAGTATGGCCAAACGATTGGGTAACGCTGTTGGAGAGTTTGAGAATGTGGACTGTAACGCAGAGGGTTTTTGCTGGGGTCCGAGTCTTCGTGTGCGCATTCGTTTGGATATCTCGAAACCTCTTCGTCGTGGTATCAAGCTGAATATCGAGGGTCCCATGGGTGGTTGCTGGATTCCTATGCAATATGAGAGATTGCCTCAATTTTGTGGCCACTGTGGGATGTTTGACCATGGGTCTTCTGAATGTCCTATCCTTCTCAATCCTGTTCATGAGTTGCTGGTCAAGAGGTTCCAGTATGGCAGTTGGCTAAGGTTTGACGGACCTGTGAAAATGTTCGGGAAAGATGCGGCGGAGCATTCTATTGGCTCCGATGACGGTAAGGATTCTTCGGTGAAGCCGTTAGACTCGGTTGACGTGGTAGCTGTGAGTCCGACGATCCCGGAGAAAGTTGGGGAAACCGTTGAGCATGGTCTTGAGGATTCGGTTCAGACTACTGAAGTGGGGAAACAAACTTCTCAATCAGTTAGTGGTGCTGGATCAGTTGTTGCGACTGGGGCGTGTGCGGTTAGTGGGCCGAATGTTGTTGGGGGGTCGAGTGTGGTTAATGGGTCGCGTTTGGTCAGTGGGCCGAATGTTGTCAAAGACCCTCCCGTTATTGCTGCATTAAATGGTCTTGAGGTTATTAGTGGGTATGGCCCACATGCAAGGAAGGGAGGGGCACCTGCTGTAGATGATTTGTCTCAGCCCAAAGGTTCTTCAACTACCAAATGGAAGAGACAGGCCCGAATGAAATCTGGTTCAGGGGGTGTTATTTCTGTGTCCCCGAAACGTAAGGCGGTCGCTTTGCCTAGTGAGCCTACGGTGAAGAAGCCAAAGGTGGCGAGTGTGGATGTTGGTGCAGAAGATGTTGTTGCTGTTTCTGAGTCTGTTTTTGTATCGGCGGAGGCTGGTGAGCAGCCCCGCCGAGAATTATGAAAATCTTATGTTGGAATGTTCGGGGGATGGGGACCCCTCGAACATTTCGTGCTGTTAGTGACGTTCTTCGTCACATGAAATCCCCTTTGATGTTCTTATGTGAAACAAAAACTAATGAAAGATCAATGTCTCGGTTGAAAAACCTTTTGAATTATTCTGGGTGTTTCTTTGTCAATAGTAGCGGTGCTAGTGGTGGTTTATGTTTATTATGGAATGATGATGTTGATGTTCGTATCCGTTCTTATTCGTTATGTCATATTGATGCTTCTGTAGTCTGGAATGGAAAATTGTGGCGTTTTTCTGGCATTTATGGGCAGCCAAAGAACCACCTTAGATTCCAAACGTGGGATATTTTGCGTCGTTTGCATAATAGTGATGATTCCGCATGGGTAATTGGTGGTGATTTAAATGAAATTATGTGGGATTCTGAGAAACATGGTGGAGTTGCTCGCTCTTTTGAATTGATGTCCAATTTTCGACTTGCATTAAATGATTGTGGTTTGCGTGATTTTGGGTTTAGAGGTGATGTGTTTACATGGTGTAATCGTCGGCCAGTGACTGATCGTATATACGAGAGATTGGATAGGTATGTAGGGAATGAGGCCTTTTATCAGATGTTTCCTACGGCTCAAGTTACAAATTTAGATTGGGAGTGCTCCGATCATAGGCCAGTGGAACTCTTGCTAGTACCAGTTGTTCGGTCCGGGAGGTTGACCTCTCGCTCGGTTGGGTTTAAATTTAATGCTCAATGGGTTCGTCACGAGGATTGTAGAAAAATCATTTCGGATTGTAGGGAGTGGTCAGCTACTGATCGGTCTACATCTGGTTTGGCTCGAAATCTTCTCTATTGTTCCTCTCGGTTGCAGTTTTGGGGTCGTGGGGTCAATAGAGCCTTAATGCAGGATATTCACAGGAAGAAACAGGCAATCAAGGATGCTTACAATCATATGAATCCTGTGGATTTTTCAGTTATTCATGCTTTGGAGGATGATTTGGCGAGGTTATTGGAAGAGGAGGAAATTTACTGGCACCAGAGGTCTCGAGAGAATTGGCTTAAGTGGGGCGATAGAAATACGAAGTGGTTCCATTTTAAGGCTTCAGAGAGAAAGAAACGTAATGCTATTTGTGGTATCAAGCGGAATGATGGTGTTTGGGTTGATTCAGGTTCAGATGTGGAATCTGTCTTTGTGGATTATTTTCAGAATATTTTCAGCTCTTCAGATCCATCTATTTCCTAGCAATCCATTATCTTGGATCATATTCAACCTATTATTTCTCCTGGTATGAATTCCAAGCTATTATTGCCCTTTCGAAAGGAGGAAATAGAGCGGGTTGTTAAACAGATGTTTCCAACGAAGGCTCCTGGGCCGGATGGGTTTCCTGCGATTTTTTATCAATCATATTGGGATATTGTTGGGCCTCAAACTGTGGCCAGTTGTCTTGAGGTGCTTAATAATCGTAAGTCTATTCGGGAATGGAATAAAACTAATATTGCTCTTATCCCTAAGACTCATGCCCCAGTTGAGGTTGGTGACTATCGTCCTATCAGTCTGTGTAATGTCTCGTACAAGATTGTGGCAAAAGTTTTGGCTAATAGATTGAAAGATGTGCTTTGTTCTGTGGTTTCAGAGGCTCAATCTGCTTTTGTTCCTGGACGTGCTATTATTGATAATGTTATTATTGGCCACGAATGTTTAAATTATATTCAGCATCGTCGAAAAGGCCGGGAAGGGTTTGCTGCGCTTAAACTTGATATGAGCAAGGCTTATGATCGGGTTGAATGGTCATTTCTAGAATCTTTGATGAGGCGCATGAGTTTTGCTGTTGATTGGGTTGATATTATTATGGACTGCATCACAACAGTGGAATTTTCCGTGTTAATTAATGGAATGGCTTGTGGGCATATTGTTCCTCGTCGTGGGATTCGACAAGGTGATCCGCTTTCACCTTATCTATTTGTTTTATGTGCTGAAGGTCTATCTCATGCTCTAGCCTCGGCCCATGCTGCTCGTCAAATTTCGGGTGTTCGGATTGGTACGTATTGTCCCTCCATTTCGCATTTGTTTTTTTGCGGATGATAGTTTAGTATTTTTTTAAAGCAAATGTGTTGGAAGGTTGGCATATTAAGCGGATCTTGAATGAGTATGAATTAGCTTCGGGCCACAAAGTGTTAATTTCTTGAAATCTGTTTTGATTGTCTCTCCGAATATTTCCTGTGATAGTCAAGAGTTATTGGGCTCTGTTTTGGGCGTTCCGATTGTGAATGATTTGGGTACCTACCTGGGGCTGCCGTCTCGGTTTCCCCGATCCAAAGGGCTCTGTTTTCGGAAGACTATTGAGCAGGTTAAAAAGGTGGTACAAGGGTGGAAACGTTCATTTTTTTTCTGCAGGCGGGAAGGAGACTCTTATTAAAAGTGTTGCTCAAGCAATTCCGACATATGCCATGAGTTGCTTTCGGCTTCCCAAATCATTTTGTCAGGAGGTTACTAAGGAAATCGCTCGTTTTTGGTGGGGTTCGTCGGACACTCGCAAGAAGTTACATTGGCATCGATGGGAGAAAATGTGTTTGCCAAAGGAGGCGGGTGGGCTTAGCTTTCGAGATATAGAGGGCTTTAACCAAACATTATTGGCCAAGCAGGTGTGGCGGGTTTTAAAGTTTCCTCAGTTGTTAGTTTCTCGAGTGTTGAAAGGCAAGTATTTTCCGGATTCGTCTGTGCTCACGGTGCCTTGTTCGCATACTGCCTCCTATTTCTGGCGGGGTTTTTTGTGGGGGAGAGAGCTTTTGCAGTTAGGCTTGCGGAAGAGAATTGGGAATGGTTTATCCACATATTTCTATAGGGATCCTTGGCTTCCTCGTGGGATTACATTCAAGCCGATCTTGAGTCCGATATCTCCATTTTCCTCTCCCTTGTCTCTGGTGAGCGATTTTATAAACTGCGTCTAGGGAGTGGGATTTGGTGAAATTATCTGTGCTTTTAACTCCTGAGGATCTTCAGCTTGTCCAAACTATTCCGATTGGTAGGGAGTGTTCGGAGGATACTTGGTTGTGGCATTATGATAAGCGTGGGATATACTCTGTTAAAAGTGGGTACAAATTGCTTATGCTTCGTAGTCAGGAGGCCCAATCTTCTCTTCCATCAGGCTGTGCTCAATGGTGGGGGCAGAAAGTTCCTTCTAAGGTTAAGGCGTTTATGTGGCGTGCATTCCAGTCCATTATTCCGACATCGGTGACTCTAGTTCAGCGAGGAGTTGTTACTGATACTTTGTGTAATTTGTGTTATCGCTGTCCGAAAACCATTGATCACGCATTGGTTACTTGTAAGAGATCTAAGAGTCTCTGGCAATTATTATTACCTCAGGTCGATTGGTCAGTTGGTTTCAATAATAGTTTTTCTGATCGTTGTATTGCGTTGCAGAGTATGCTTTCTGATCATGACTTCGGTTTGTGGTGTGTTGGTTGTTGGGCGTTGTGGAATGATCGTAATGCAGCCAGAGGAGGCCAAATGATTTCGGATATTCCGCTTAAACGTTCATGGATTGAGAATTATCTGGCTGATTTTCTTTCAGTGCAGGATCGTGGTAGTAATGATTTGGTTGTTCCTATAGCTCAGCGTGTGGTTGCTGGTTTGCGTTGGGAATGTCCTCCGTTGGGTTGGGTTAAATTAAATGTTGATGCTTCTTGTTCTTCCAAGTATCACAAGACAGGTATCGGGATTTTTCTTCGTACTGCTTCTGGCCGTCTTCATGCAGCTCAAACGGCGGTTTTCCCTGTTGTTTATAGTCCTCCCGTAGCTGAAGCTTTGGCTATTCTTGTCGGTCTTCGCCTGGTTAGGACACTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATATTATTTCCATGTTGAATGGTTCTGGAATGTCTTTCCATGAAGACGGAACTCTAGTGGAAGAGATTTTGGTGCTGGCATCTTTGTTTCAGCAGGTGGTATTTCGTCACGTTCTTCGGGGAAGAAACCATTCAGCTCATTGTTTGGCATCTCAGGCTTGCGTTAAAGGTTCCTTTTTGTGGAGTTCTACTTTCCCTGAATGGGTGACAAATGTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCCTTGTGGCAATTTGTTACTTTAG

mRNA sequence

ATGGCTACTGATGCACTGCTTGAGGGTTGGAAGAAGTTCAATTTGACTGCAGCGGAGGAAGAGGTTGCAGTGGATATTGATTCTGTCGCGGTTCTAGATGCCAAGGCCCAGATGTCTAACTGCCTCGCTGTGAAGCTTCTCGCGTCGCGTCCCATTGCCTGTGATGTAATTCGAAGGACTATGGCTATTGCTTGGCGGGTTGAGTCGGGGCTGTCTGTCGAGAAATTGGGTAAGAATATGTTTCTGTTCTTGTTTGACAGGGCTGTGGATTGCGTTCGGGTTCTCCGTTCGGGACCGTGGTACTTTGATAAATTCTTGTTTGTTATTGAGAGGCTGAATACATTGATCAAGCCATCTGAGATGCGTTTTAATATGGTGGCATTCTGGGTCCATTTTTTTGATCTCCCTGTTGGTTGTATGAATCCTAGTATGGCCAAACGATTGGGTAACGCTGTTGGAGAGTTTGAGAATGTGGACTGTAACGCAGAGGGTTTTTGCTGGGGTCCGAGTCTTCGTGTGCGCATTCGTTTGGATATCTCGAAACCTCTTCGTCGTGGTATCAAGCTGAATATCGAGGGTCCCATGGGTGGTTGCTGGATTCCTATGCAATATGAGAGATTGCCTCAATTTTGTGGCCACTGTGGGATGTTTGACCATGGGTCTTCTGAATGTCCTATCCTTCTCAATCCTGTTCATGAGTTGCTGGTCAAGAGGTTCCAGTATGGCAGTTGGCTAAGGTTTGACGGACCTGTGAAAATGTTCGGGAAAGATGCGGCGGAGCATTCTATTGGCTCCGATGACGGTAAGGATTCTTCGGTGAAGCCGTTAGACTCGGTTGACGTGGTAGCTGTGAGTCCGACGATCCCGGAGAAAGTTGGGGAAACCGTTGAGCATGGTCTTGAGGATTCGGTTCAGACTACTGAAGTGGGGAAACAAACTTCTCAATCAGTTAGTGGTGCTGGATCAGTTGTTGCGACTGGGGCGTGTGCGGTTAGTGGGCCGAATGTTGTTGGGGGGTCGAGTGTGGTTAATGGGTCGCGTTTGGTCAGTGGGCCGAATGTTGTCAAAGACCCTCCCGTTATTGCTGCATTAAATGGTCTTGAGGTTATTAGTGGGTATGGCCCACATGCAAGGAAGGGAGGGGCACCTGCTGTAGATGATTTGTCTCAGCCCAAAGGTTCTTCAACTACCAAATGGAAGAGACAGGCCCGAATGAAATCTGTTGCTCGCTCTTTTGAATTGATGTCCAATTTTCGACTTGCATTAAATGATTGTGGTTTGCGTGATTTTGGGTTTAGAGGTGATGTGTTTACATGGTGTAATCGTCGGCCAGTGACTGATCGTATATACGAGAGATTGGATAGGTATGTAGGGAATGAGGCCTTTTATCAGATGTTTCCTACGGCTCAAGTTACAAATTTAGATTGGGAGTGCTCCGATCATAGGCCAGTGGAACTCTTGCTAGTACCAGTTGTTCGGTCCGGGAGGTTGACCTCTCGCTCGGTTGGGTTTAAATTTAATGCTCAATGGGTTCGTCACGAGGATTGTAGAAAAATCATTTCGGATTGTAGGGAGTGGTCAGCTACTGATCGGTCTACATCTGGTTTGGCTCGAAATCTTCTCTATTGTTCCTCTCGGTTGCAGTTTTGGGGTCGTGGGGTCAATAGAGCCTTAATGCAGGATATTCACAGGAAGAAACAGGCAATCAAGGATGCTTACAATCATATGAATCCTGTGGATTTTTCAGTTATTCATGCTTTGGAGGATGATTTGGCGAGGTTATTGGAAGAGGAGGAAATTTACTGGCACCAGAGGTCTCGAGAGAATTGGCTTAAGTGGGGCGATAGAAATACGAAGTGGTTCCATTTTAAGGCTTCAGAGAGAAAGAAACGTAATGCTATTTGTGGTATCAAGCGGAATGATGGTGTTTGGCTCTTCAGATCCATCTATTTCCTAGCAATCCATTATCTTGGATCATATTCAACCTATTATTTCTCCTGGGAGTGGGATTTGGTGAAATTATCTGTGCTTTTAACTCCTGAGGATCTTCAGCTTGTCCAAACTATTCCGATTGGTAGGGAGTGTTCGGAGGATACTTGGTTGTGGCATTATGATAAGCGTGGGATATACTCTGTTAAAAGTGGGTACAAATTGCTTATGCTTCGTAGTCAGGAGGCCCAATCTTCTCTTCCATCAGGCTGTGCTCAATGGTGGGGGCAGAAAGTTCCTTCTAAGGTTAAGGCGTTTATGTGGCGTGCATTCCAGTCCATTATTCCGACATCGGTGACTCTAGTTCAGCGAGGAGTTGTTACTGATACTTTGTGTAATTTGTGTTATCGCTGTCCGAAAACCATTGATCACGCATTGGTTACTTGTAAGAGATCTAAGAGTCTCTGGCAATTATTATTACCTCAGGTCGATTGGTCAGTTGGTTTCAATAATAGTTTTTCTGATCGTTGTATTGCGTTGCAGAGTATGCTTTCTGATCATGACTTCGGTTTGTGGTGTGTTGGTTGTTGGGCGTTGTGGAATGATCGTAATGCAGCCAGAGGAGGCCAAATGATTTCGGATATTCCGCTTAAACGTTCATGGATTGAGAATTATCTGGCTGATTTTCTTTCAGTGCAGGATCGTGGTAGTAATGATTTGGTTGTTCCTATAGCTCAGCGTGTGGTTGCTGGTTTGCGTTGGGAATGTCCTCCGTTGGGTTGGGTTAAATTAAATGTTGATGCTTCTTGTTCTTCCAAGTATCACAAGACAGGTATCGGGATTTTTCTTCGTACTGCTTCTGGCCGTCTTCATGCAGCTCAAACGGCGGTTTTCCCTGTTGTTTATAGTCCTCCCGTAGCTGAAGCTTTGGCTATTCTTGTCGGTCTTCGCCTGGTTAGGACACTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATATTATTTCCATGTTGAATGGTTCTGGAATGTCTTTCCATGAAGACGGAACTCTAGTGGAAGAGATTTTGGTGCTGGCATCTTTGTTTCAGCAGGTGGTATTTCGTCACGTTCTTCGGGGAAGAAACCATTCAGCTCATTGTTTGGCATCTCAGGCTTGCGTTAAAGGTTCCTTTTTGTGGAGTTCTACTTTCCCTGAATGGGTGACAAATGTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCCTTGTGGCAATTTGTTACTTTAG

Coding sequence (CDS)

ATGGCTACTGATGCACTGCTTGAGGGTTGGAAGAAGTTCAATTTGACTGCAGCGGAGGAAGAGGTTGCAGTGGATATTGATTCTGTCGCGGTTCTAGATGCCAAGGCCCAGATGTCTAACTGCCTCGCTGTGAAGCTTCTCGCGTCGCGTCCCATTGCCTGTGATGTAATTCGAAGGACTATGGCTATTGCTTGGCGGGTTGAGTCGGGGCTGTCTGTCGAGAAATTGGGTAAGAATATGTTTCTGTTCTTGTTTGACAGGGCTGTGGATTGCGTTCGGGTTCTCCGTTCGGGACCGTGGTACTTTGATAAATTCTTGTTTGTTATTGAGAGGCTGAATACATTGATCAAGCCATCTGAGATGCGTTTTAATATGGTGGCATTCTGGGTCCATTTTTTTGATCTCCCTGTTGGTTGTATGAATCCTAGTATGGCCAAACGATTGGGTAACGCTGTTGGAGAGTTTGAGAATGTGGACTGTAACGCAGAGGGTTTTTGCTGGGGTCCGAGTCTTCGTGTGCGCATTCGTTTGGATATCTCGAAACCTCTTCGTCGTGGTATCAAGCTGAATATCGAGGGTCCCATGGGTGGTTGCTGGATTCCTATGCAATATGAGAGATTGCCTCAATTTTGTGGCCACTGTGGGATGTTTGACCATGGGTCTTCTGAATGTCCTATCCTTCTCAATCCTGTTCATGAGTTGCTGGTCAAGAGGTTCCAGTATGGCAGTTGGCTAAGGTTTGACGGACCTGTGAAAATGTTCGGGAAAGATGCGGCGGAGCATTCTATTGGCTCCGATGACGGTAAGGATTCTTCGGTGAAGCCGTTAGACTCGGTTGACGTGGTAGCTGTGAGTCCGACGATCCCGGAGAAAGTTGGGGAAACCGTTGAGCATGGTCTTGAGGATTCGGTTCAGACTACTGAAGTGGGGAAACAAACTTCTCAATCAGTTAGTGGTGCTGGATCAGTTGTTGCGACTGGGGCGTGTGCGGTTAGTGGGCCGAATGTTGTTGGGGGGTCGAGTGTGGTTAATGGGTCGCGTTTGGTCAGTGGGCCGAATGTTGTCAAAGACCCTCCCGTTATTGCTGCATTAAATGGTCTTGAGGTTATTAGTGGGTATGGCCCACATGCAAGGAAGGGAGGGGCACCTGCTGTAGATGATTTGTCTCAGCCCAAAGGTTCTTCAACTACCAAATGGAAGAGACAGGCCCGAATGAAATCTGTTGCTCGCTCTTTTGAATTGATGTCCAATTTTCGACTTGCATTAAATGATTGTGGTTTGCGTGATTTTGGGTTTAGAGGTGATGTGTTTACATGGTGTAATCGTCGGCCAGTGACTGATCGTATATACGAGAGATTGGATAGGTATGTAGGGAATGAGGCCTTTTATCAGATGTTTCCTACGGCTCAAGTTACAAATTTAGATTGGGAGTGCTCCGATCATAGGCCAGTGGAACTCTTGCTAGTACCAGTTGTTCGGTCCGGGAGGTTGACCTCTCGCTCGGTTGGGTTTAAATTTAATGCTCAATGGGTTCGTCACGAGGATTGTAGAAAAATCATTTCGGATTGTAGGGAGTGGTCAGCTACTGATCGGTCTACATCTGGTTTGGCTCGAAATCTTCTCTATTGTTCCTCTCGGTTGCAGTTTTGGGGTCGTGGGGTCAATAGAGCCTTAATGCAGGATATTCACAGGAAGAAACAGGCAATCAAGGATGCTTACAATCATATGAATCCTGTGGATTTTTCAGTTATTCATGCTTTGGAGGATGATTTGGCGAGGTTATTGGAAGAGGAGGAAATTTACTGGCACCAGAGGTCTCGAGAGAATTGGCTTAAGTGGGGCGATAGAAATACGAAGTGGTTCCATTTTAAGGCTTCAGAGAGAAAGAAACGTAATGCTATTTGTGGTATCAAGCGGAATGATGGTGTTTGGCTCTTCAGATCCATCTATTTCCTAGCAATCCATTATCTTGGATCATATTCAACCTATTATTTCTCCTGGGAGTGGGATTTGGTGAAATTATCTGTGCTTTTAACTCCTGAGGATCTTCAGCTTGTCCAAACTATTCCGATTGGTAGGGAGTGTTCGGAGGATACTTGGTTGTGGCATTATGATAAGCGTGGGATATACTCTGTTAAAAGTGGGTACAAATTGCTTATGCTTCGTAGTCAGGAGGCCCAATCTTCTCTTCCATCAGGCTGTGCTCAATGGTGGGGGCAGAAAGTTCCTTCTAAGGTTAAGGCGTTTATGTGGCGTGCATTCCAGTCCATTATTCCGACATCGGTGACTCTAGTTCAGCGAGGAGTTGTTACTGATACTTTGTGTAATTTGTGTTATCGCTGTCCGAAAACCATTGATCACGCATTGGTTACTTGTAAGAGATCTAAGAGTCTCTGGCAATTATTATTACCTCAGGTCGATTGGTCAGTTGGTTTCAATAATAGTTTTTCTGATCGTTGTATTGCGTTGCAGAGTATGCTTTCTGATCATGACTTCGGTTTGTGGTGTGTTGGTTGTTGGGCGTTGTGGAATGATCGTAATGCAGCCAGAGGAGGCCAAATGATTTCGGATATTCCGCTTAAACGTTCATGGATTGAGAATTATCTGGCTGATTTTCTTTCAGTGCAGGATCGTGGTAGTAATGATTTGGTTGTTCCTATAGCTCAGCGTGTGGTTGCTGGTTTGCGTTGGGAATGTCCTCCGTTGGGTTGGGTTAAATTAAATGTTGATGCTTCTTGTTCTTCCAAGTATCACAAGACAGGTATCGGGATTTTTCTTCGTACTGCTTCTGGCCGTCTTCATGCAGCTCAAACGGCGGTTTTCCCTGTTGTTTATAGTCCTCCCGTAGCTGAAGCTTTGGCTATTCTTGTCGGTCTTCGCCTGGTTAGGACACTGGGTCTGGCTCGTGTTGAAGTGGAGTCTGATTGTCTTCATATTATTTCCATGTTGAATGGTTCTGGAATGTCTTTCCATGAAGACGGAACTCTAGTGGAAGAGATTTTGGTGCTGGCATCTTTGTTTCAGCAGGTGGTATTTCGTCACGTTCTTCGGGGAAGAAACCATTCAGCTCATTGTTTGGCATCTCAGGCTTGCGTTAAAGGTTCCTTTTTGTGGAGTTCTACTTTCCCTGAATGGGTGACAAATGTTGTGTTGCAGGATTTCCCTTCTGCTTTGTGTAGCCCTTGTGGCAATTTGTTACTTTAG

Protein sequence

MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRTMAIAWRVESGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSEMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDISKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRFQYGSWLRFDGPVKMFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAVSPTIPEKVGETVEHGLEDSVQTTEVGKQTSQSVSGAGSVVATGACAVSGPNVVGGSSVVNGSRLVSGPNVVKDPPVIAALNGLEVISGYGPHARKGGAPAVDDLSQPKGSSTTKWKRQARMKSVARSFELMSNFRLALNDCGLRDFGFRGDVFTWCNRRPVTDRIYERLDRYVGNEAFYQMFPTAQVTNLDWECSDHRPVELLLVPVVRSGRLTSRSVGFKFNAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSSRLQFWGRGVNRALMQDIHRKKQAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYWHQRSRENWLKWGDRNTKWFHFKASERKKRNAICGIKRNDGVWLFRSIYFLAIHYLGSYSTYYFSWEWDLVKLSVLLTPEDLQLVQTIPIGRECSEDTWLWHYDKRGIYSVKSGYKLLMLRSQEAQSSLPSGCAQWWGQKVPSKVKAFMWRAFQSIIPTSVTLVQRGVVTDTLCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQVDWSVGFNNSFSDRCIALQSMLSDHDFGLWCVGCWALWNDRNAARGGQMISDIPLKRSWIENYLADFLSVQDRGSNDLVVPIAQRVVAGLRWECPPLGWVKLNVDASCSSKYHKTGIGIFLRTASGRLHAAQTAVFPVVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHIISMLNGSGMSFHEDGTLVEEILVLASLFQQVVFRHVLRGRNHSAHCLASQACVKGSFLWSSTFPEWVTNVVLQDFPSALCSPCGNLLL

Homology

[Close]

BLAST of Spg024951.1 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 385.2 bits (988), Expect = 1.9e-102
Identity = 384/1547 (24.82%), Postives = 537/1547 (34.71%), Query Frame = 0


Query: 1    MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
            MAT  LLE WK F LT+ EEE A+D+D+ A     +++   L  KL   RPI C V++ T
Sbjct: 1    MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61   MAIAWRVE-SGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPS 120
            M  AW++E +   V+ LG N+FLF F RA+D  ++ +SGPW FD+ L +I +   LI PS
Sbjct: 61   MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121  EMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDI 180
            E+ F  +  WV FFDLP+GC+   MA RLGNA+G FE  DC+     WG +LRVR+ LDI
Sbjct: 121  ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181  SKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRF 240
            SKPLRRGIKLN++GP+GG WIP+QYERLP FC HCG+    SS              K+ 
Sbjct: 181  SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---SSSR-------------KKH 240

Query: 241  QYGSWLRFDGPVK---------------MFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAV 300
            QYGSWLR+ G VK                 G ++   S          V+   +   +A+
Sbjct: 241  QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAI 300

Query: 301  SPTIPEKVGETVEHGLEDSVQTTEVGKQTSQSVSGAGSVVATGACAVSGPNVVGGSSVVN 360
                P  V ET + G E S Q    GK       G   +       ++ P   G  S+  
Sbjct: 301  PMESP--VTETPKKGAEPSQQ----GKSPVLIDEGEQRINVKEISNLNPPLKSGAPSM-- 360

Query: 361  GSRLVSGPNVVKDPPVIAALNGLEVISGY-GPHARKGGAPAV-------DDLSQPKGSST 420
                         P    +L  +++  G+ G      G PA        + L +      
Sbjct: 361  ------------QPSYSDSLTRMDLSPGFSGRFTGFYGHPAAHKRHLTWELLRRISNLDA 420

Query: 421  TKWKRQARMKSVARSFEL----------MSNFRLALNDCGLRDFGFRGDVFTWCNRRPVT 480
            + W     M ++  ++E           +  FR  ++ C L D GF+G +FTWCN R   
Sbjct: 421  SPWLIGGDMNAILWNYEASYTSSYDTSQIEAFRNIMDACSLTDMGFKGGIFTWCNNRFAG 480

Query: 481  DRIYERLDRYVGNEAFYQMFPTAQVTNLDWECSDHRPVELLLVPVVRSGRLTSRSVGFKF 540
            D++++RLDR++ N+ F  +FP A                        SG  ++ +  + F
Sbjct: 481  DQLWKRLDRFLCNDTFNYVFPDA------------------------SGHWSNATHNYSF 540

Query: 541  NAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSSRLQFWGRGVNRALMQDIHRKK 600
                          SD  + S                SS L+ WGR     L + I  +K
Sbjct: 541  --------------SDSIQAS----------------SSALRHWGRSNVWDLFKQIKAQK 600

Query: 601  QAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYWHQRSRENWLKW------------- 660
             AI DAYN   P+DF++IHALE+DLA LLE EEI+W QRSRE+WLKW             
Sbjct: 601  AAIIDAYNQPLPLDFTIIHALENDLAGLLELEEIFWKQRSREDWLKWGIAILNALDIEAI 660

Query: 661  ------------------------------------------------------------ 720
                                                                        
Sbjct: 661  INLIPTRITSEVNEQLLAPYTKEEIELAIRQMFPTKALGPDGFPALFYQTYWHVVGPKTL 720

Query: 721  ---------GDRNTKW-------------------------------FHFKASERKKRNA 780
                     GD   KW                                  K+   + +N 
Sbjct: 721  EACLNALNNGDDIKKWNSTYIALIPKIKQPRSISDFRPISLCNVSYKIISKSITNRLKNV 780

Query: 781  I----------------------------------------------------------- 840
            I                                                           
Sbjct: 781  IGLVISDAQSAFVPSRAISDNVIIGHECLHTINSCKSGLIGMAALKLDLSKAFDRVEWTY 840

Query: 841  -------------------------------------C-----GIKRNDGV--WLF---- 900
                                                 C     GI++ D +  +LF    
Sbjct: 841  LECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQGDPLSPYLFLLCA 900

Query: 901  ------------------------------------------------------------ 960
                                                                        
Sbjct: 901  EGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESECLALRRLLDSYGR 960

Query: 961  ----------------------RSIYFLAI----------HYLG---------------- 1020
                                  R  Y   I          +YLG                
Sbjct: 961  ASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSHFTRRRGESRKLH 1020

Query: 1021 ------------------------------------------------------------ 1057
                                                                        
Sbjct: 1021 WMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDTSLLQ 1080

[Close]

BLAST of Spg024951.1 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 276.2 bits (705), Expect = 1.2e-69
Identity = 145/331 (43.81%), Postives = 200/331 (60.42%), Query Frame = 0


Query: 1   MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
           M  + LL  W+KF LT+ E+E+A+D+D  AV  A+  ++  L  KLLA R I+ DV+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  MAIAWRVESGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSE 120
           + +AW+VE  L+VE +GKN+FLF F R  D  RV+++GPW+FDK L V+++  +    SE
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDIS 180
           + FN VAFW+H FDLP+  +N +MA RLGNA+G F +VDCN +GF WG SLR+R+ +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRFQ 240
           KPLRRGIK+NI+GPMGGCWIP+QYERLP FC  CG+  H S +C        +      +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGSWLRFDGPVKMFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAVSPTIPEKVGETVEHGL 300
           YG WLRF G      K     S   +D   SS        + +    + E   +  E   
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSS-------SMNSKERGVEETKQQLSEQTN 300

Query: 301 EDSVQTTEVGKQTSQSVSGAGSVVATGACAV 332
           +D  Q+    +QT  +    G   ATG CA+
Sbjct: 301 QDGFQSQAAAEQTGDA---GGRASATG-CAL 320

[Close]

BLAST of Spg024951.1 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-69
Identity = 129/250 (51.60%), Postives = 169/250 (67.60%), Query Frame = 0


Query: 1   MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
           MA   LLE WK F LT+ E+++AVDIDS A+      +   L  KLL+ R I+C V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  MAIAWRVE-SGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPS 120
           + IAW+++    SV+ +G N+FLF F+R+ D  R+LR GPW FD+ L +I+   +L KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 EMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDI 180
           +M F  V+ WVHFFDL + CMN +MA RLGNA+G FE+V+ NA  FCWG  LRVR+R D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRF 240
            KPL RGIKLN++GPMGGCWIP+QYERLP F  HCG  DH   +C    +   + + K  
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS---DCCVDSVSKNL 240

Query: 241 QYGSWLRFDG 250
           QYG WLRF G
Sbjct: 241 QYGPWLRFQG 247

[Close]

BLAST of Spg024951.1 vs. NCBI nr
Match: KAF2317147.1 (hypothetical protein GH714_012179 [Hevea brasiliensis])

HSP 1 Score: 254.2 bits (648), Expect = 4.9e-63
Identity = 192/716 (26.82%), Postives = 316/716 (44.13%), Query Frame = 0


Query: 414  LMSNFRLALNDCGLRDFGFRGDVFTWCNRRPVTDRIYERLDRYVGNEAFYQMFPTAQVTN 473
            L+ +FR A+   GL D    G  +TW N R   D +  +LDR++ N+ + + F  ++   
Sbjct: 62   LVQDFRDAVLQAGLSDVNMNGYKYTWDNARDDDDWVEAKLDRFLANDDWKRRFALSKAAV 121

Query: 474  LDWECSDHRPVELLLVPVV---RSGRLTSRSVGFKFNAQWVRHEDCRKIISDCREWSATD 533
            LD+  SDH P+ LL V +     S RL      F+F   W     CR+I+ +   WS  D
Sbjct: 122  LDYSSSDHLPI-LLQVRIFLPRHSPRL------FRFENTWGAESGCREIVEEI--WS--D 181

Query: 534  RSTSGLARNLLYCSSRLQFWGRGVNRALMQDIHRKKQAIKDAYNHMNPVDFSVIHALEDD 593
             S   +   L +CS RL  WG  + +   Q+I   K+ +       +          +  
Sbjct: 182  PSLGSVLEKLQFCSVRLGEWGDNLRKLYKQEIDDCKRVMGLLRGKRDAHSRESFRMAKSK 241

Query: 594  LARLLEEEEIYWHQRSRENWLKWGDRNTKWFHFKASERKKRNAICGIKRNDGVW------ 653
               LL  +E YW QR++E WLK GD+NTK+FH KA+ R+++N I  +K ++G W      
Sbjct: 242  FLDLLRRKESYWRQRAKEFWLKEGDQNTKFFHRKATIRQRKNRIDRLKDDNGNWCDWSTG 301

Query: 654  -------LFRSIY-------------------------------------FLAIHYLGSY 713
                    F++I+                                      +   +  ++
Sbjct: 302  LEAMITDYFKNIFTSNAGSSNDIIDLVPALVTDDQNVDLMKPWLPDVAFPMVTTTFDFNF 361

Query: 714  STYYFS-----WEWDLVKLSVLLTPEDLQLVQTIPIGRECSEDTWLWHYDKRGIYSVKSG 773
              Y  S       W++  ++ +    D +L+ +IP+ R  S D   W +DKRG YSV S 
Sbjct: 362  GVYMVSDLITDGAWNIDLVNRVFNERDRKLILSIPLRRSSSIDLQFWKHDKRGSYSVSSA 421

Query: 774  YKLLMLRSQEAQSSLPSGCAQWWGQ--KVPS--KVKAFMWRAFQSIIPTSVTLVQRGVVT 833
            YKL     Q  +S    G  ++W +   +P+  K++ F+WRA    +PT   L  R V T
Sbjct: 422  YKL-----QTQESDTAVGNKKFWKKLWSIPAAPKIRNFLWRAVSGSLPTRSRLCSRHVPT 481

Query: 834  DTLCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQVDWSVGFNNSFSDRCIALQSMLSDHD 893
              +C LC    +++ H LV C  ++ +W  L   + W     +SF D  +   ++ + +D
Sbjct: 482  TEVCPLCNVDCESVKHVLVECSFARHVW--LASHLGWFSPSTHSFQDWLMRALALFNPND 541

Query: 894  FGLWCVGCWALWNDRNA--------ARGGQMISDIPLKRSWIENYLADFLSVQDRGSNDL 953
                   CW++W +RN+        A     +  + LKR W      D   V  R +   
Sbjct: 542  SATLAYLCWSIWEERNSVVWKSAQPAANSCRLRGLRLKREW------DDALVSIRAA--- 601

Query: 954  VVPIAQRVVAGLRWECPPLGWVKLNVDASCSSKYHKTGIGIFLRTASGRLHAAQTAVFPV 1013
             +P    +     W+ P   WVKLNVD + +     TGIG+ +R   G   A + +    
Sbjct: 602  -IPPTADLPTPQEWKKPGPNWVKLNVDIATNVNSGWTGIGMVVRNEMGSFVACKISRMVG 661

Query: 1014 VYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHIISMLNGSGM-SFHEDGTLVEEILV 1057
            ++SP +AE + +   L  ++      V VESD L ++++LN   + +F   G +V +   
Sbjct: 662  LFSPTIAEIMGVREALSWIKDNNWQNVIVESDNLQVVNVLNSMNVENFSMMGGIVSDCRS 721

[Close]

BLAST of Spg024951.1 vs. NCBI nr
Match: VFQ81500.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 251.9 bits (642), Expect = 2.4e-62
Identity = 272/1206 (22.55%), Postives = 446/1206 (36.98%), Query Frame = 0


Query: 41   CLAVKLLASRPIACDVIRRTMAIAWRVESGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPW 100
            CL  + L  RP+    ++ TMA  WR E G+ V+++G  +++F F    +  RV+   PW
Sbjct: 42   CLVGRFLTERPVNFVAMKNTMASLWRPEEGMVVKEVGAGLYIFQFGALAEMERVMEMCPW 101

Query: 101  YFDKFLFVIERLNTLIKPSEMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDC 160
             F+    ++ERL     PSE+  + +  WV  + L  G  +  +A+RLGN +G+F   D 
Sbjct: 102  SFNNQALLLERLGRSKDPSEVSLHHLYVWVRVYGLKRGFFSERVAQRLGNEIGQFVEADP 161

Query: 161  NAEGFCWGPSLRVRIRLDISKPLRRGIKLNIEGPMGGCW--IPMQYERLPQFCGHCGMFD 220
                  W   LR+R++LD+ KPL++G +L  EG     W  +   YERLP FC  CG   
Sbjct: 162  KNFSNPWSSYLRIRVKLDVQKPLKKGTRLKREGKE---WFHVDFAYERLPTFCFVCGRLG 221

Query: 221  HGSSECPILLNPVHELLVKRFQYGSWLRFDGPVKMFGKDAAEHSIGSDDGKDSSVKPLDS 280
            HG   CP  L      + ++F         GP        A ++IG+   ++        
Sbjct: 222  HGERFCPETLRQWGRQVERKF---------GPELRASTRRASNNIGARWLREE------- 281

Query: 281  VDVVAVSPTIPEKVGETVEHGLEDSVQTTEVGKQTSQSVSGAGSVVATGACAVSGPNVVG 340
                   P   ++  +  + G  DS ++T      S  +     V  +   AV   N   
Sbjct: 282  ------LPPRGDEAQQQEKIGKGDSRRSTPAYTGLSSVLCKQDGVPPSTELAVWQRN-RE 341

Query: 341  GSSVVNGSRLVS--GPNVVKDPPVIAALNGLEVISGYGPHARKGGAPAVDDLSQPKGSST 400
             + ++  S L +    N++   P +  L     +    P  RK      +  S   G   
Sbjct: 342  ATHMMESSNLQNRFDQNLMDKQPDVEML-----LIPTDPKKRKKSVDEKNGESSGSGGLA 401

Query: 401  TKWKRQARMKSVARSFELMSNFRLALNDCGLRDFGFRGDVFTWCNRRPVTDRIYERLDRY 460
              WK    +  ++ S     +  + + D  L  +   G               Y   D+ 
Sbjct: 402  LLWKSPLNVTLLSLS---RFHIDVEVEDLALGRWRHTG--------------FYGHPDQS 461

Query: 461  VGNEAFYQMFPTAQVTNLDWECSDH---------------RPVELLLV--PVVRSGRLTS 520
              +E++  +   +Q + L W C                  +P  L+      V    L  
Sbjct: 462  RRSESWDLLRDLSQASTLPWICGGDFNAIMEQHEKQGGPPKPRYLIQAFREAVEDAGLMD 521

Query: 521  RSVG-----------FKFNAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSSRLQ 580
              +G           F+F   W      R ++ DC E S      + L   L +CS+RL 
Sbjct: 522  FPLGGAWVPKPYAHRFRFENAWRSDPTLRPLLLDCWEVS----HAASLEEKLNFCSTRLH 581

Query: 581  FWGR------GVNRALMQDIHRKKQAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYW 640
             WG            +M+ I R+ +  +D   H + + F      +  L  L   +E +W
Sbjct: 582  VWGMEWKDQFASEINIMRTIQRRTRGRRD---HQSRIQF---QRAKKRLFELYALKEAFW 641

Query: 641  HQRSRENWLKWGDRNTKWFHFKASERKKRNAICGIKRNDG-------------------- 700
             Q++++ WL  GDRNTK+FH +ASER++ N I  +  ++G                    
Sbjct: 642  RQQAKQFWLTQGDRNTKFFHAQASERQRLNRIDRLTDSNGQLRTWSNGLEDTIKEYFEEL 701

Query: 701  -----------------------------------------------------------V 760
                                                                        
Sbjct: 702  YHAQGNPGHIIQSLIPSLVSREDNAMLRQPYSYEEVRQAVFSMHPDKSPGGDGFNPGKMA 761

Query: 761  W------------LFRSIYFLAIHYL----GSYSTYYFS--------------------- 820
            W            +F++ YF    +L    GS S++ +                      
Sbjct: 762  WKFLTQPDLLVSKVFKAKYFRDCSFLEAQIGSNSSFVWKSIFATKDLLHTGIRWKVGPGT 821

Query: 821  ----WE---------------------------------WDLVKLSVLLTPEDLQLVQTI 880
                WE                                 WD   +  +    D Q ++ I
Sbjct: 822  NISIWEDPWLMDNENPFITTENPGSIALTRVSDLRSPNGWDWPTIDAIFNARDRQCIEAI 881

Query: 881  PIGRECSEDTWLWHYDKRGIYSVKSGYKLLMLRSQEAQSSLPSGCAQW---WGQKVPSKV 940
            P+    S D  +W +DK GIY+VKS YK L   +      +    A W   W  +V  KV
Sbjct: 882  PLTGSSSNDMLIWAHDKSGIYTVKSAYKALTWDATVLGHGMDR--ALWKKLWAVRVLPKV 941

Query: 941  KAFMWRAFQSIIPTSVTLVQRGVVTDTLCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQV 1000
            +  +WRA  +I+P    LV + V    +C LC+   +T+ H  V C  ++ +W      +
Sbjct: 942  RNLIWRAANNILPCLNNLVTKRVTVQDVCPLCHTSEETVLHIFVHCPFARQVWGASF--L 1001

Query: 1001 DWSVGFNNSFSDRCIALQSMLSDHDFGLWCVGCWALWNDRNAA--RGGQMISDIPLKRSW 1047
             W      SF D  +A+  + +++D GL     W +W+ RNA   +G        ++RS 
Sbjct: 1002 GWYAPAVGSFHDWLLAVLHLFNEYDKGLAFHLLWMIWSARNAKVWKG--------VRRSP 1061

[Close]

BLAST of Spg024951.1 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 9.0e-103
Identity = 384/1547 (24.82%), Postives = 537/1547 (34.71%), Query Frame = 0


Query: 1    MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
            MAT  LLE WK F LT+ EEE A+D+D+ A     +++   L  KL   RPI C V++ T
Sbjct: 1    MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61   MAIAWRVE-SGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPS 120
            M  AW++E +   V+ LG N+FLF F RA+D  ++ +SGPW FD+ L +I +   LI PS
Sbjct: 61   MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121  EMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDI 180
            E+ F  +  WV FFDLP+GC+   MA RLGNA+G FE  DC+     WG +LRVR+ LDI
Sbjct: 121  ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181  SKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRF 240
            SKPLRRGIKLN++GP+GG WIP+QYERLP FC HCG+    SS              K+ 
Sbjct: 181  SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---SSSR-------------KKH 240

Query: 241  QYGSWLRFDGPVK---------------MFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAV 300
            QYGSWLR+ G VK                 G ++   S          V+   +   +A+
Sbjct: 241  QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAI 300

Query: 301  SPTIPEKVGETVEHGLEDSVQTTEVGKQTSQSVSGAGSVVATGACAVSGPNVVGGSSVVN 360
                P  V ET + G E S Q    GK       G   +       ++ P   G  S+  
Sbjct: 301  PMESP--VTETPKKGAEPSQQ----GKSPVLIDEGEQRINVKEISNLNPPLKSGAPSM-- 360

Query: 361  GSRLVSGPNVVKDPPVIAALNGLEVISGY-GPHARKGGAPAV-------DDLSQPKGSST 420
                         P    +L  +++  G+ G      G PA        + L +      
Sbjct: 361  ------------QPSYSDSLTRMDLSPGFSGRFTGFYGHPAAHKRHLTWELLRRISNLDA 420

Query: 421  TKWKRQARMKSVARSFEL----------MSNFRLALNDCGLRDFGFRGDVFTWCNRRPVT 480
            + W     M ++  ++E           +  FR  ++ C L D GF+G +FTWCN R   
Sbjct: 421  SPWLIGGDMNAILWNYEASYTSSYDTSQIEAFRNIMDACSLTDMGFKGGIFTWCNNRFAG 480

Query: 481  DRIYERLDRYVGNEAFYQMFPTAQVTNLDWECSDHRPVELLLVPVVRSGRLTSRSVGFKF 540
            D++++RLDR++ N+ F  +FP A                        SG  ++ +  + F
Sbjct: 481  DQLWKRLDRFLCNDTFNYVFPDA------------------------SGHWSNATHNYSF 540

Query: 541  NAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSSRLQFWGRGVNRALMQDIHRKK 600
                          SD  + S                SS L+ WGR     L + I  +K
Sbjct: 541  --------------SDSIQAS----------------SSALRHWGRSNVWDLFKQIKAQK 600

Query: 601  QAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYWHQRSRENWLKW------------- 660
             AI DAYN   P+DF++IHALE+DLA LLE EEI+W QRSRE+WLKW             
Sbjct: 601  AAIIDAYNQPLPLDFTIIHALENDLAGLLELEEIFWKQRSREDWLKWGIAILNALDIEAI 660

Query: 661  ------------------------------------------------------------ 720
                                                                        
Sbjct: 661  INLIPTRITSEVNEQLLAPYTKEEIELAIRQMFPTKALGPDGFPALFYQTYWHVVGPKTL 720

Query: 721  ---------GDRNTKW-------------------------------FHFKASERKKRNA 780
                     GD   KW                                  K+   + +N 
Sbjct: 721  EACLNALNNGDDIKKWNSTYIALIPKIKQPRSISDFRPISLCNVSYKIISKSITNRLKNV 780

Query: 781  I----------------------------------------------------------- 840
            I                                                           
Sbjct: 781  IGLVISDAQSAFVPSRAISDNVIIGHECLHTINSCKSGLIGMAALKLDLSKAFDRVEWTY 840

Query: 841  -------------------------------------C-----GIKRNDGV--WLF---- 900
                                                 C     GI++ D +  +LF    
Sbjct: 841  LECIMRKMGFNEGWIQAIIQCISTVRFSIHLNGSPGGCFQPSRGIRQGDPLSPYLFLLCA 900

Query: 901  ------------------------------------------------------------ 960
                                                                        
Sbjct: 901  EGLSALINHENNSGRLTGIHFEENNTSITHLLFADDSLIFLRSLESECLALRRLLDSYGR 960

Query: 961  ----------------------RSIYFLAI----------HYLG---------------- 1020
                                  R  Y   I          +YLG                
Sbjct: 961  ASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSHFTRRRGESRKLH 1020

Query: 1021 ------------------------------------------------------------ 1057
                                                                        
Sbjct: 1021 WMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDTSLLQ 1080

[Close]

BLAST of Spg024951.1 vs. ExPASy TrEMBL
Match: A0A803QI56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-75
Identity = 293/1175 (24.94%), Postives = 459/1175 (39.06%), Query Frame = 0


Query: 41   CLAVKLLASRPIACDVIRRTMAIAWRVESGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPW 100
            CL  + L ++ +    ++  MA  W+   G+ V++L  N+FLF F   VD  RV+   PW
Sbjct: 45   CLVGRFLTNKGVDFQAMQNKMATLWQPGRGMYVKELDSNLFLFQFYHEVDIDRVIEGSPW 104

Query: 101  YFDKFLFVIERLNTLIKPSEMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDC 160
             FD+   + ERL     P  +  N + FWV   +L  G M   + + LGN VG F   D 
Sbjct: 105  TFDRVPLIFERLKQGEDPRMITLNKLDFWVQIHNLTTGFMLERVVRDLGNYVGTFIKTDP 164

Query: 161  NAEGFCWGPSLRVRIRLDISKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHG 220
            N     W   LRVR++++I  PL+R  K+  +G +  C+   +YE L  FC   G+  H 
Sbjct: 165  NNFIGVWRDYLRVRVKINIECPLKRRKKVEKQGGV-HCYANFKYEGLSTFCFIGGILGHS 224

Query: 221  SSECPILLN-PVHELLV------------KRFQYGS-WLRFDGPVKMFGKDAAEH----- 280
               C  L + P+ ++              K +  G  WLR     ++ G   ++H     
Sbjct: 225  ERFCEQLFHTPLDQIQKPYTLELKATPRRKNYAIGERWLRSGAASRVGGMAFSDHATTGE 284

Query: 281  --------------------------SIGSDDGKD-----------SSVKPLDSVDVVAV 340
                                      ++GS   +            +S+  L     +  
Sbjct: 285  RSTPINGNQTINNHGRQSRLNHIPPNNLGSSSNQSINERGNSNMMANSLPQLKEGGAIID 344

Query: 341  SPTIPEK-VGETVEH----GLEDSVQTTEVGKQTSQSVSGAG---------SVVATG--- 400
             P++ E  VG+T         E S+   +  ++ +  V+G G          V  T    
Sbjct: 345  QPSMKETIVGDTALKSNMINKETSILILDTKRRRTDIVNGLGLDNNLDNNTHVEVTNEEF 404

Query: 401  --ACAVSGP----NVVGGSSVVNGSR--------LVS--GPNVV---------KDPPVIA 460
                 + GP    NV+  +    G++        +VS   PN +         K    + 
Sbjct: 405  GDVGPIQGPPGIMNVLSWNCRGLGNQRAIQFLKEIVSQKNPNFIFLCETKCDKKRIESMG 464

Query: 461  ALNGLEVISGYGPHARKGGAPAV----DD---------------LSQPKGS--------- 520
             +   E + G       GG   +    DD                S  KG+         
Sbjct: 465  RMLKFEGVFGVEAQGSSGGLALLWKNKDDGHVLGYSNNHIDFLVESSEKGAWKLTGFYGE 524

Query: 521  -------------------STTKWKRQARMKSVARSFE----------LMSNFRLALNDC 580
                               ST  W     + ++ R  +          L+  F+ ALNDC
Sbjct: 525  PERNNRHRSWTLLRTLATDSTLPWCVIGDLNNIVRHEDKRGGRPYPQRLIDGFQQALNDC 584

Query: 581  GLRDFGFRGDVFTWCNRRPVTDRIYERLDRYVGNEAFYQMFPTAQVTNLDWECSDHRPVE 640
             L D    G  FTW   R   + I  RLDR + N+A+ Q+F  A + NL+   SDH P+ 
Sbjct: 585  NLIDMELVGHPFTWEKGRGSRNWIEVRLDRALINDAWSQIFQGASLINLEISSSDHCPI- 644

Query: 641  LLLVPVVRSGRLTSRSVGFKFNAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSS 700
              L P +     T+R   FKF   W++   C +I+ DC E    D   + LAR    C+ 
Sbjct: 645  -FLEPEINHCFPTNRK--FKFENAWLKEPMCFEIVRDCWESEGDDNLPNKLAR----CAD 704

Query: 701  RLQFWGRGVNRALMQDIHRKKQAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYWHQR 760
            +L  WG+ V       I R K  IK   N  +         ++++L  +L++ E +W QR
Sbjct: 705  KLSIWGKEVTGNFKARITRCKNEIKRLANKRDTASIQRHKEVKEELFHVLDQRESFWKQR 764

Query: 761  SRENWLKWGDRN--TKWFHFKASERKKRNAICGIKRNDGVWL-FRSIYFLAIHY--LGSY 820
            S++ WLK GD N  T+W  F   E         I      WL      ++  H+  LG  
Sbjct: 765  SKQLWLKEGDHNSSTRWCVFDGEE---------INVLKEPWLPSEDDPYVHSHHPSLGEA 824

Query: 821  STYYF----SWEWDLVKLSVLLTPEDLQLVQTIPIGRECSEDTWLWHYDKRGIYSVKSGY 880
                        WD+  L+ L    D +L+  IP+      D   W Y+  GIYSVKSGY
Sbjct: 825  KVRNLMVMEGGSWDVDILNDLFIERDKKLILDIPLNISHGNDKLTWSYESSGIYSVKSGY 884

Query: 881  KLLML---RSQEAQSSLPSGCAQWWGQKVPSKVKAFMWRAFQSIIPTSVTLVQRGVVTDT 940
             LL     R    +  L     ++W QK+P KVK  +WRA +  +PT   L  + V   T
Sbjct: 885  NLLQKIHGRWDGNEDDLTKFWTKFWKQKIPPKVKNLVWRAARECLPTLQQLKIKRVDVQT 944

Query: 941  LCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQVDWSVGFNNSFSDRCIALQSMLSDHDFG 1000
             C +C+   +++ HAL+TC + K +W  +   +  +     +F D  +A  +        
Sbjct: 945  SCPVCHSEDESVIHALITCTKVKQVWDRVGIGITTAAAEPENFLDWFVAAFTAAEAEKKL 1004

Query: 1001 LWCVGCWALWNDRN----AARGGQMISDIPLKRSWIENYLADFLSVQDRGSNDLVVPIAQ 1044
            L  V CWA+W+ RN      +     S + L   ++E +     S  +   + L      
Sbjct: 1005 LLPVLCWAIWSARNDVVWQKKSVTAASIVVLATGYLEQWKNAQNSRIETSWSGLKADDGA 1064

[Close]

BLAST of Spg024951.1 vs. ExPASy TrEMBL
Match: A0A803QPR1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 7.4e-73
Identity = 279/1123 (24.84%), Postives = 459/1123 (40.87%), Query Frame = 0


Query: 25   DIDSVAVLDAKAQMSN-----CLAVKLLASRPIACDVIRRTMAIAWRVESGLSVEKLGKN 84
            D+D + + D    +S      CL  + L  R I C  I+  MA  W+   GL V++L  N
Sbjct: 12   DVDRLVLDDDDGDLSEIDDRWCLVGRFLTKRSIDCQAIQHRMASLWQPNRGLYVKELDPN 71

Query: 85   MFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSEMRFNMVAFWVHFFDLPVGC 144
             FLF F   +   RV+   PW FD+   + ER+     P ++    +  W+   D+  G 
Sbjct: 72   HFLFQFYHEIGITRVIDGSPWTFDRVPLIFERVKPGENPRQISLTRLDVWIQCHDMKTGF 131

Query: 145  MNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDISKPLRRGIKLNIEGPMG-GC 204
            M+ +  K + N +G F   D N     W   LRVR  +++ KPL++  K+ +E   G  C
Sbjct: 132  MSENTLKHMANYIGTFMKSDPNNFTGVWRDYLRVRTTINVEKPLKK--KMTLERKNGQTC 191

Query: 205  WIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRFQY--------------GSW 264
             +  +YE LP FC  CG+  H       L + + +++ K F                  W
Sbjct: 192  TVQFKYEDLPTFCFICGVLGHSKWFYDRLFDTLAKVIKKMFDLSLKAAPRRRQHTIGSPW 251

Query: 265  LR----FDGPVKMFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAVSPTIPEKVGETVEHGL 324
            LR    + GPV   G+ +      + +G++S+   + ++  +       + +   V H L
Sbjct: 252  LRSGASYRGPVTGGGESSQAGVSRNFNGEESNQGLIANLHNIG---NPQQLIRGDVSHLL 311

Query: 325  EDSVQTTEVGKQTSQSVSGAGSVVATGACAVSGPNVVG------------GSSVV---NG 384
            E         K   +S+ G   V +    + +   VV             G SVV   +G
Sbjct: 312  EKD------PKAKDKSIQGGNDVASEDILSNNALLVVENKRRRTDVEKGLGESVVDQMDG 371

Query: 385  SRL-------VSGPNVV-----KDPPV---IAALNG--LEVISGYGPHARKGGAPAVDDL 444
            S L       +S  N +     +D  +   +A L+G    +   YG   R         L
Sbjct: 372  SNLSSIGLGRISNDNGIFEMLDQDNHIDMKVATLDGSWWRLTGVYGEPNRNEREQTWTLL 431

Query: 445  SQPKGSSTTKWKRQARMKSVARSFE----------LMSNFRLALNDCGLRDFGFRGDVFT 504
                 +ST  W     + +V    +          L+  F+  L++CGL D    G  FT
Sbjct: 432  KTLTRNSTLPWCVIGDLNNVLSQEDKKGGRPYPQWLLQGFQSCLDECGLEDLELLGYPFT 491

Query: 505  WCNRRPVTDRIYERLDRYVGNEAFYQMFPTAQVTNLDWECSDHRPVELLLVPVVRSGRLT 564
            W   R   + I  RLDR +   ++  +F  A +TNL+   SDH P+   L P+VR    T
Sbjct: 492  WERARGTREWIEVRLDRALVTNSWRTLFLEACLTNLEASTSDHCPI--FLEPIVRVSFRT 551

Query: 565  SRSVGFKFNAQWVRHEDCRKIISDCREWSATDRSTSGLARNLLYCSSRLQFWGRGVNRAL 624
             R   F+F   W+    C +++ DC +  + D STSG    +  C   L  WG+ +    
Sbjct: 552  PRR--FRFENAWLSEPMCYQLVQDCWDTQSND-STSG---KISMCVEVLGRWGKEITGDF 611

Query: 625  MQDIHRKKQAIKDAYNHMNPVDFSVIHALEDDLARLLEEEEIYWHQRSRENWLKWGDRNT 684
               I + K  +      M+           + L  +LE++E +W QR+++ WLK GD+N+
Sbjct: 612  KSRIKQCKTTMSILKPKMDAESVKQYAEARNRLFEVLEQQETFWKQRAKQFWLKGGDKNS 671

Query: 685  KWFHFKASERKKRNAICGIKRNDGVWL---FRSIYFLAIHYLGSYSTYYFSWEWDLVKLS 744
            K+FH  AS RK+ N I  +K + G W+    R    +  +Y   ++T     +  +  +S
Sbjct: 672  KYFHKTASSRKQHNTILQLKDDHGTWVDWNNRLANVINSYYTSLFATANTHCQEVIDSVS 731

Query: 745  VL-----------------------------------LTPEDLQLVQTIPIGRECSE--- 804
             +                                   +TP   Q    I + R+ +    
Sbjct: 732  AIVPSHANEELSKPVSEEGVRKAVFQMHPDKSPGPDGMTPAFYQKCWQI-VKRDVTRTVQ 791

Query: 805  --------DTWLWHYDKRGIYSVKSGYKLLM-LRSQEAQSSLPSGCAQWWGQKVPSKVKA 864
                    +   W  +    +SVKS Y +L  L+      +      + W  K+PSK++ 
Sbjct: 792  HFFEHGVLEDGFWSKENSSTFSVKSAYAVLQKLKGNWFDDAGDVFWRKLWQLKLPSKMQN 851

Query: 865  FMWRAFQSIIPTSVTLVQRGVVTDTLCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQVDW 924
             +WRA  + + T V L  + V    LC +C+   +TI HALVTC+  +  W  +      
Sbjct: 852  LVWRACNNCLSTVVQLRTKRVDVSPLCPICHNEHETILHALVTCREVRKCWDRV--GFGT 911

Query: 925  SVGFNNSFSDRC-IALQSMLSDHDFGLWCVGCWALWNDRNAARGGQMISDIPLKRSWIEN 984
            SV    SF D C +A ++  +  +  +  V CWA+W  RN     +         ++   
Sbjct: 912  SVTPGASFFDWCSVAFRNNSATVNCRI-VVVCWAVWGARNNLVWNKKPFIFEDVVAYAFR 971

Query: 985  YLADFLSVQDRGSNDLVVPIAQRVVAGLRWECPPLGWVKLNVDASCSSKYHKTGIGIFLR 1031
            YL  + S Q   S++   PI      G +W  P    VK+NVDA+  +     G+G+  R
Sbjct: 972  YLDQWKSAQ--VSSNSSWPILTAADVGEQWTPPDGTSVKINVDAAIFNDGRSFGLGMVAR 1031

[Close]

BLAST of Spg024951.1 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.9e-70
Identity = 145/331 (43.81%), Postives = 200/331 (60.42%), Query Frame = 0


Query: 1   MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
           M  + LL  W+KF LT+ E+E+A+D+D  AV  A+  ++  L  KLLA R I+ DV+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  MAIAWRVESGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSE 120
           + +AW+VE  L+VE +GKN+FLF F R  D  RV+++GPW+FDK L V+++  +    SE
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDIS 180
           + FN VAFW+H FDLP+  +N +MA RLGNA+G F +VDCN +GF WG SLR+R+ +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRFQ 240
           KPLRRGIK+NI+GPMGGCWIP+QYERLP FC  CG+  H S +C        +      +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGSWLRFDGPVKMFGKDAAEHSIGSDDGKDSSVKPLDSVDVVAVSPTIPEKVGETVEHGL 300
           YG WLRF G      K     S   +D   SS        + +    + E   +  E   
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSS-------SMNSKERGVEETKQQLSEQTN 300

Query: 301 EDSVQTTEVGKQTSQSVSGAGSVVATGACAV 332
           +D  Q+    +QT  +    G   ATG CA+
Sbjct: 301 QDGFQSQAAAEQTGDA---GGRASATG-CAL 320

[Close]

BLAST of Spg024951.1 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.3e-69
Identity = 129/250 (51.60%), Postives = 169/250 (67.60%), Query Frame = 0


Query: 1   MATDALLEGWKKFNLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVKLLASRPIACDVIRRT 60
           MA   LLE WK F LT+ E+++AVDIDS A+      +   L  KLL+ R I+C V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  MAIAWRVE-SGLSVEKLGKNMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPS 120
           + IAW+++    SV+ +G N+FLF F+R+ D  R+LR GPW FD+ L +I+   +L KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 EMRFNMVAFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDI 180
           +M F  V+ WVHFFDL + CMN +MA RLGNA+G FE+V+ NA  FCWG  LRVR+R D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SKPLRRGIKLNIEGPMGGCWIPMQYERLPQFCGHCGMFDHGSSECPILLNPVHELLVKRF 240
            KPL RGIKLN++GPMGGCWIP+QYERLP F  HCG  DH   +C    +   + + K  
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCS---DCCVDSVSKNL 240

Query: 241 QYGSWLRFDG 250
           QYG WLRF G
Sbjct: 241 QYGPWLRFQG 247

[Close]

BLAST of Spg024951.1 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 3.8e-29
Identity = 107/411 (26.03%), Postives = 175/411 (42.58%), Query Frame = 0


Query: 662  TYYFSWEWDLVKLSVLLTPEDLQLVQTIPIGRECSEDTWLWHYDKRGIYSVKSGYKLLML 721
            +YYF   WD  K+S  +   D   +  I + +    D  +W+Y+  G Y+V+SGY LL  
Sbjct: 84   SYYF---WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLL-- 143

Query: 722  RSQEAQSSLPS-----GC----AQWWGQKVPSKVKAFMWRAFQSIIPTSVTLVQRGVVTD 781
             + +  +++P+     G      + W   +  K+K F+WRA    + T+  L  RG+  D
Sbjct: 144  -THDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRID 203

Query: 782  TLCNLCYRCPKTIDHALVTCKRSKSLWQLLLPQVDWSVGFNNSFSDRCIALQSMLSD--- 841
              C  C+R  ++I+HAL TC  +   W+L    +  +   +N F +    + + + D   
Sbjct: 204  PSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTM 263

Query: 842  HDF----GLWCVGCWALWNDRNAARGGQMISDIPLKRSWIENYLADFLSVQDRGSNDLVV 901
             DF     +W +  W +W  RN     +            +    D+L+   +       
Sbjct: 264  SDFHKLLPVWLI--WRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA-TQSHKKTPS 323

Query: 902  PIAQRVVAGLRWECPPLGWVKLNVDASCS-SKYHKTGIGIFLRTASGRLHAAQTAVFPVV 961
            P  Q     + W  PP  +VK N DA     K   TG G  +R   G   +  +      
Sbjct: 324  PTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATG-GWIIRNHYGTPISWGSMKLAHT 383

Query: 962  YSPPVAEALAILVGLRLVRTLGLARVEVESDCLHIISMLNGSGMSFHED-GTLVEEILVL 1021
             +P  AE  A+L  L+     G  +V +E DC  +I+++N  G+SFH      +E+I   
Sbjct: 384  SNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLIN--GISFHSSLANHLEDISFW 443

Query: 1022 ASLFQQVVFRHVLRGRNHSAHCLASQACVKGSFL-WSSTFPEWVTNVVLQD 1054
            A+ F  + F  + R  N  AH LA   C   +F   S + P W+      D
Sbjct: 444  ANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGSLPIWLDRYFCND 482

[Close]

BLAST of Spg024951.1 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-19
Identity = 91/388 (23.45%), Postives = 160/388 (41.24%), Query Frame = 0


Query: 668  EWDLVKLSVLLTPEDLQLVQTIPIGRECSEDTWLWHYDKRGIYSVKSGY----KLLMLRS 727
            EW    + +L    + +L+  +  G     D++ W Y   G Y+VKSGY    +++  RS
Sbjct: 181  EWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRS 240

Query: 728  QEAQSSLPS---GCAQWWGQKVPSKVKAFMWRAFQSIIPTSVTLVQRGVVTDTLCNLCYR 787
               + S PS      + W  +   K++ F+W+   + +P +  L  R +  ++ C  C  
Sbjct: 241  SPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPS 300

Query: 788  CPKTIDHALVTCKRSKSLWQL--------------LLPQVDW--SVGFNNSFSDRCIALQ 847
            C +T++H L  C  ++  W +              +   + W  ++G  N   ++   L 
Sbjct: 301  CKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLV 360

Query: 848  SMLSDHDFGLWCVGCWALWNDRN--AARGGQMISDIPLKRSWIENYLADFLSVQDRGSND 907
              L            W LW +RN    RG +  +   L+R+  E+ L ++  ++    + 
Sbjct: 361  PWL-----------LWRLWKNRNELVFRGREFNAQEVLRRA--EDDLEEW-RIRTEAESC 420

Query: 908  LVVPIAQRVVAGLRWECPPLGWVKLNVDASCSSKYHKTGIGIFLRTASGRLHAAQTAVFP 967
               P   R   G RW  PP  WVK N DA+ +    + GIG  LR   G +        P
Sbjct: 421  GTKPQVNRSSCG-RWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALP 480

Query: 968  VVYSPPVAEALAILVGLRLVRTLGLARVEVESDCLHIISMLNGSGMSFHEDGTLVEEILV 1027
             + S   AE  A+   +  +       V  ESD   +I +LN   + +      ++++  
Sbjct: 481  KLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEI-WPSLKPTIQDLQR 540

Query: 1028 LASLFQQVVFRHVLRGRNHSAHCLASQA 1031
            L S F +V F  + R  N  A  +A ++
Sbjct: 541  LLSQFTEVKFVFIPREGNTLAERVARES 552

[Close]

BLAST of Spg024951.1 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-13
Identity = 58/221 (26.24%), Postives = 102/221 (46.15%), Query Frame = 0


Query: 14  NLTAAEEEVAVDIDSVAVLDAKAQMSNCLAVK--LLASRPI--ACDVIRRTMAIAWRV-- 73
           NL  A +++ + +D +     +  +++ +A    +L  RP+      +R  +A   R+  
Sbjct: 99  NLRRAVQDINLGVDDIPFALPEDIVNHAVAENRFILFGRPVMPRRQNLRSIVASMPRIWG 158

Query: 74  ESGLSVEKLGK-NMFLFLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSEMRFNMV 133
           +SGL   ++ +   F F+F        VLR GPW F+ ++ +++R     +P    F  +
Sbjct: 159 QSGLVHGRIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQRW----EPQIPLFPFI 218

Query: 134 AFWVHFFDLPVGCMNPSMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDISKPLRRG 193
            FWV    +P   +N  + + +G A+G+  + D N E        RV +  DI+ PLR  
Sbjct: 219 PFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLR-- 278

Query: 194 IKLNIEGPMG-GCWIPMQYERLPQFCGHCGMFDHGSSECPI 227
            + + +   G    +  +YERL  FC  CGM  H    C I
Sbjct: 279 FQRHFQFTAGVNTLLRFRYERLRGFCEVCGMLTHDFGACLI 313

[Close]

BLAST of Spg024951.1 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-10
Identity = 38/143 (26.57%), Postives = 57/143 (39.86%), Query Frame = 0


Query: 83  FLFDRAVDCVRVLRSGPWYFDKFLFVIERLNTLIKPSEMRFNMVAFWVHFFDLPVGCMNP 142
           FLF        +LR GPW F+ ++ VI+R   L   S+  F  + FW+    +P+  +  
Sbjct: 64  FLFQSEESMFSILRRGPWSFNDWMCVIQRWTKL--HSDAEFKRIPFWIQIRGIPLRFLTA 123

Query: 143 SMAKRLGNAVGEFENVDCNAEGFCWGPSLRVRIRLDISKPLRRGIKLNIEGPMGGCWIPM 202
            +   +G  +G F               L   +  D+S                   +  
Sbjct: 124 RIITSIGERMGLF---------------LETNLGRDVSV------------------LKF 171

Query: 203 QYERLPQFCGHCGMFDHGSSECP 226
           QYE+L  FC  CGM  H +SECP
Sbjct: 184 QYEKLKNFCTTCGMLSHDASECP 171

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BLAST of Spg024951.1 vs. TAIR 10
Match: AT2G04420.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 7.4e-09
Identity = 42/156 (26.92%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 896  RWECPPLGWVKLNVDASCSSKYHKTGIGIFLRTASGRLHAAQTAVFPVVYSPPVAEALAI 955
            +WE PP+GW+K N D S + +  +T  G  +R   G    A  AV   + +   +E  A+
Sbjct: 62   KWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALESELQAL 121

Query: 956  LVGLRLVRTLGLARVEVESDCLHIISMLNGSGMSFHEDGTLVEEILVLASLFQQVVFRHV 1015
            ++ ++   + G  +V  E D   +  +LN   M F      + E    +  F++V+F   
Sbjct: 122  VMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGA-FNWIREAWSWSKRFEEVIFSWT 181

Query: 1016 LRGRNHSAHCLA-SQACVKGSFLWSSTFPEWVTNVV 1051
             R  N  A  LA S      SF++    P ++TN +
Sbjct: 182  PRTNNQPADMLAKSHLPQDTSFIYHYFVPNFITNAL 216

The following BLAST results are available for this feature:

BLAST of Spg024951.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	1.9e-102	24.82	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_022156185.1	1.2e-69	43.81	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	2.7e-69	51.60	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
KAF2317147.1	4.9e-63	26.82	hypothetical protein GH714_012179 [Hevea brasiliensis]	[more]
VFQ81500.1	2.4e-62	22.55	unnamed protein product [Cuscuta campestris]	[more]

BLAST of Spg024951.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024951.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	9.0e-103	24.82	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A803QI56	3.5e-75	24.94	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QPR1	7.4e-73	24.84	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1DU55	5.9e-70	43.81	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	1.3e-69	51.60	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of Spg024951.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	3.8e-29	26.03	Ribonuclease H-like superfamily protein	[more]
AT4G29090.1	1.2e-19	23.45	Ribonuclease H-like superfamily protein	[more]
AT3G31430.1	1.0e-13	26.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42140.1	1.0e-10	26.57	zinc ion binding;nucleic acid binding	[more]
AT2G04420.1	7.4e-09	26.92	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 903..1031 e-value: 1.1E-14 score: 56.6
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 34..175 e-value: 1.0E-26 score: 93.2
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 908..1030 e-value: 4.2E-21 score: 75.0
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 710..799 e-value: 1.7E-15 score: 57.4
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 177..225 e-value: 1.2E-10 score: 40.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..400
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 888..1053
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 907..1027 e-value: 3.80073E-24 score: 96.6144
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 411..486
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 903..1028

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg024951	Spg024951	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg024951.1-cds	Spg024951.1-cds-scaffold12:8123409..8124630	CDS
Spg024951.1-cds	Spg024951.1-cds-scaffold12:8125254..8125963	CDS
Spg024951.1-cds	Spg024951.1-cds-scaffold12:8126023..8126090	CDS
Spg024951.1-cds	Spg024951.1-cds-scaffold12:8127754..8128957	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg024951.1	Spg024951.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity