
Spg023569.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAACCTGCACTTTCTTCTTCTTATTCTTCTTCGAAGTATTAAACCCCAACGAAGGCGGACTCTTCTTCTTCACGAAGTGATTTTCAGAGAAACCGGCGGATCAGAATGGGAAACCAGAAGCAAAAGTGGACGCAGGAGGAAGAAGATGCACTCTTGGCCGGCGTACAGAAGCACGGTCCCGGGAAGTGGAAGAACATTCTCAAAGATCCTGAATTCGCTCCGTTTCTCACTCATCGCTCGAACATTGACCTCAAGGTCCCCATTCAACTGCTTATTCTTTACAATTATTCTTCTGCGTGTTTCTTGTATTCCTGTTTGGATTGTTATTTAGGGTTTAAATCATGAACTCGAGGCTTCGAATTTTATTGGCTGGGTTTACTTGCAATTTATGTAGATAAACTTGGTTGAGTGGTTTAAGATCGAAGAAGTTGGTTTTGTTCTTAAATTTTTTAACAACTATAAATATTTCCCCGATGGTCTCTTATGGTTTTCTGCGTTAATTTGTTGACTAAATATTACTGTATGGTTTGCCCGAAGTTTTGTTTTTGATGAACGGAGTAGTGTAAGAAGAAAGTCCTGAAAGTGGAATTAGAGGGAAGAAAGAGTTTGATTTGGTATTTAACTATTAAATATTAATAATATGATGAAGCTTCAACTTGGTTGATTGACACTTTTGGCGATATAGGAGTGATAATGAGTTCATATGATAGGGTTCGCTTCTAAGAGGAGATTCATGGCAATGGCCAATGCCATTAATTACCTAAGGCTTAAAGTTACGTTTGAGTATTCTAGTGGACCCCAATTAACTGTGGTCTTGGATGAATTGAATAAGATCTTCTTTTAGTCTGTTCCTACTTCCTAGATGCATCTTTGAGATAATTTGTGTTCCAGCATTACTAGAAACAATGATGGTATGATTTTATTTGTCTAAAATTTAAGGATTAAATAAGTAAATTCTTTGATTATTTTGAACAAGAAACAAAACTAAGTAGAGCCCTTGATTAAAAATCTTATATTCTTCCTGTAACTTTAAAATATTGTATAATGTATACTCGAAATAGCTTGATTGCCTCACTACTAATATCTGAAACTGTTTATCTCTAACATTTGCTTATATATCCAGGACAAATGGCGTAATTTGAGTGTTAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATTGTTGCTCCTCCACTTTCTAACAGCCAAAACTCTGCTCCTACTAGGTTTAATGCATCCGCTGATACTGCTGGGGACGATCCACCAAACAGCAGCACACAGGAAGGAAAAAATGTCCCAAGGTCTGTCTCTCTAACCGTTTAGGTATTTTACATTTGCAGCATAGAAGTCATATGTTTATTACTGTTATTATTATTTCATGGGACTGCATGGAGGGAGGGGAGAGAGTGTTTATAAACCCAGCCTTTCATTATATAAAAGCTCCCCTCCCCCTACCCCCACTCACCACCACCTACCCCACTCCAAGGTGCACAAACGAAGGAAAGATGAAAGAGAAGTTTTTAAAGAGGTTGATGGACAATAGAACATCTGATGAAATATTTTTAGCTACAAATGGAATAGCACCCCAAACAACATTAATCTTAAAGTATTTTATTTGTCAATAGATTATTATAGTAGTTCATTTTGTTTGCTCTATTATAAAATATAAAAATTATAATTGGGTCCGTGGAATGTTGTTTTTCTCTACTGTAACAACTATTGTATGACGCGTAGAGAATTTTCCCTGCATAAAGAGTATAACATGTCTTTCTGGATATAGTTTACACCATGATCACTGAATTTTGTCCAATAGCCTAGGCCTTCTATGTTTTCATTGGTAGATAAGTTTTCCATTCTCCAAGAATGCCTTCTTTTTTTCCTCTTTCCGTTACTTATAATGGTGAGCTACCGTCAAATATTCATCATAAAACTTTTAATGAGCTACCATCAAATATTCATCATAAAATATGTTAACCCCCCAACCACCACCACCTAAAATGAATATACAAATAATAAAATAAAATTTATATTACGAGGAGATGTTCCAAATGAAATAAAGGAAAGGATCAATATAACTATGCCAATTTATGGTCCTCAGTATTATAGTGGAGTCTTGTGACTTTTTCTACACGAGAAAATTCACCTATTTCTTATGTAAATGAAAGGAGAAAATTGTATTTGATCAACCTCAAGGGAAATTCCAGTCACCAGAGAAAATCATTAAAGGGGTGTTTTGATTTACCTTTTTGAGGTCTCGTCATTGGTTTTATAATGATCTGTTGACCAGGTATCATACAATGATTTTTGAAGCCCTTTCGACCATAAAAGATTCAAATGGATGTGACATAGGCACAATTGTTAACTTTATTGAGGTAAGATGGCATTCTCTTTTCTTCTTTTTTTTTTTTTTTTTTCCTTTTTTTATTGAAGGAGAGATGGCAGTACTCTTGTTTGTGAGAATGATCTGCATGGAGATCACCCCATGATTATAATATTACTCTGGCCAGACAGTTATTTTTCAACAAGGTTATTCAAACATACCGTTTCCGTACTTGCATTGTATATTTGTGAAATATGGGTCTGCTTCATGCTTTCTTTGAACTCTTTTGGTCTTCATTAACATGAATGTTCGTATTACATGATATGTTGACTGTTGATTTCATATGATGCAGCAAAGACATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTGAAATGATCTTTTCATTTTCTTATTGAATCGTTCTGATGGCAATTAATTTGTATTCTAATATTTTTATGTGGTTTATCTAAGTATATGCTTCTCTTACATCTATATCCCCTTCCCCGCCCCAAAAGAAAACCTATGTATGCTTATGGGAAAAATTGAGATGTTACACAGTACATCAAGAGAAAAAAAACGATATTGTTGATGCAATGCCTATTGTCCACTGTACACTGATGCATGCATGATTTATTGATTATTTTTTTCTCAATATACAGATTCCTAGCCAGTAGCCACTTCAAATTTGATAATATTCAGACAACCACTTTATAAATATTTTGTTGTTTTAAAATCACATTATGCTCCCACTCTTAATACAATCATGCGAGGAATGTCTTGACCTTTTTCATTGTTAATGATCTAAATTAGAAACTTGGGGATGAACTGGTATTTATATTATTGAGAGAGGTAGGAATTTTGTGATTGGGACTGTGAACAGTTTGTGGGAGTTCGAATGTTTGTTTGAACTTTTATGCATGTCATTTGTATCTTCAACAAGCCTTTGGATGGCAATGTGCCCGGCTTGCGGATATCCACACTCTTCTATCTTTTGCTATTCTTGGTCATCCCTTTAGAAAGGACAAAAAGATCATCTGGGTGAATTTTTTGTACGCTTTTTTATGGTCCCTTTGGCTAGAAAGAAATGCTAGGATCTTCTCCGATAAGAACCAAAGCATCGCATCCTTTATCGAATCTACATCCTTTCTAGCTCTGTATTGGAGTAGACACACATCTTCTCTCATATCCAATTGGAAATGTCTCTTGTAATCTCCTATGATAGGTTGATCTTTTGTATCTATTTCATACATCAATGAAATGGTTTTGTTTCCTATCAAAAAAAAAAAAAAAATGCATGTCATTTGTATTTCATGAGGTTCCTTTGTTTTCTCTCTGCCACATTACAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCATTGGCAGTTAAAACTCCTACACCCAAACAAAAAGATGTCAGGCAACGGATATCGCAATATACCACGGGAGGGTTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTATAAAGTGGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCTGAAGATACAGATACTGTGCTACACATCATAAAAGAGATGTATGAAAAATGTAAGGGAAGTGTTCATTCCTCTTGAAGTTTTGACTCTTTAACTTCTAAAACACCCTCTCTTTTTCTTTGTGTAATGTTGCAGGTTCTCGTGGTGAAATTGTTCTCTTGGCTTAGATCGCTTGTAAGTTTAATGGCCAATCCAATCCTTTGTTATTTTTGGAATCCGCATGTAAATTCTTCAATCCAGTGGAATTTTCAGCTTTCTTCATGCATCCAAATTCCACGTTGCCCTCGTCTTTTTTTGTTTGTTTTTTGGGACGAATCGAATTAATTTATAGGTAGATATACAAATATTTCTCTAGATTTTCCAATGAGCTTGTGCTTCCATTAGAATTTTGTTAGATAAAGTTTTGATTCTTGGAGGTAAGAGCCATGAAAAAAAAAAAAGGCTAGAATGAGTTCAATCTATGATGACTACCTAAATACCTATGATCATACGTGTTTCCTG ATGGGAAACCAGAAGCAAAAGTGGACGCAGGAGGAAGAAGATGCACTCTTGGCCGGCGTACAGAAGCACGGTCCCGGGAAGTGGAAGAACATTCTCAAAGATCCTGAATTCGCTCCGTTTCTCACTCATCGCTCGAACATTGACCTCAAGGACAAATGGCGTAATTTGAGTGTTAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATTGTTGCTCCTCCACTTTCTAACAGCCAAAACTCTGCTCCTACTAGGTTTAATGCATCCGCTGATACTGCTGGGGACGATCCACCAAACAGCAGCACACAGGAAGGAAAAAATGTCCCAAGGTATCATACAATGATTTTTGAAGCCCTTTCGACCATAAAAGATTCAAATGGATGTGACATAGGCACAATTGTTAACTTTATTGAGCAAAGACATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCATTGGCAGTTAAAACTCCTACACCCAAACAAAAAGATGTCAGGCAACGGATATCGCAATATACCACGGGAGGGTTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTATAAAGTGGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCTGAAGATACAGATACTGTGCTACACATCATAAAAGAGATGTATGAAAAATGTAAGGGAAGTTCTCGTGGTGAAATTGTTCTCTTGGCTTAG ATGGGAAACCAGAAGCAAAAGTGGACGCAGGAGGAAGAAGATGCACTCTTGGCCGGCGTACAGAAGCACGGTCCCGGGAAGTGGAAGAACATTCTCAAAGATCCTGAATTCGCTCCGTTTCTCACTCATCGCTCGAACATTGACCTCAAGGACAAATGGCGTAATTTGAGTGTTAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATTGTTGCTCCTCCACTTTCTAACAGCCAAAACTCTGCTCCTACTAGGTTTAATGCATCCGCTGATACTGCTGGGGACGATCCACCAAACAGCAGCACACAGGAAGGAAAAAATGTCCCAAGGTATCATACAATGATTTTTGAAGCCCTTTCGACCATAAAAGATTCAAATGGATGTGACATAGGCACAATTGTTAACTTTATTGAGCAAAGACATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCATTGGCAGTTAAAACTCCTACACCCAAACAAAAAGATGTCAGGCAACGGATATCGCAATATACCACGGGAGGGTTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTATAAAGTGGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCTGAAGATACAGATACTGTGCTACACATCATAAAAGAGATGTATGAAAAATGTAAGGGAAGTTCTCGTGGTGAAATTGTTCTCTTGGCTTAG MGNQKQKWTQEEEDALLAGVQKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVSTASQGSKEKSRAPKAKAIVAPPLSNSQNSAPTRFNASADTAGDDPPNSSTQEGKNVPRYHTMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKKDNSLAVKTPTPKQKDVRQRISQYTTGGLMPSGETVEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDTVLHIIKEMYEKCKGSSRGEIVLLA Homology
BLAST of Spg023569.1 vs. NCBI nr
Match: XP_022949571.1 (telomere repeat-binding factor 4-like [Cucurbita moschata] >XP_022949572.1 telomere repeat-binding factor 4-like [Cucurbita moschata] >XP_022949573.1 telomere repeat-binding factor 4-like [Cucurbita moschata]) HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138 Identity = 260/281 (92.53%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Spg023569.1 vs. NCBI nr
Match: XP_023525823.1 (telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo] >XP_023525824.1 telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 501.5 bits (1290), Expect = 4.7e-138 Identity = 259/281 (92.17%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Spg023569.1 vs. NCBI nr
Match: XP_022998553.1 (telomere repeat-binding factor 4-like [Cucurbita maxima] >XP_022998554.1 telomere repeat-binding factor 4-like [Cucurbita maxima]) HSP 1 Score: 501.1 bits (1289), Expect = 6.1e-138 Identity = 259/281 (92.17%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Spg023569.1 vs. NCBI nr
Match: KAG6606708.1 (Telomere repeat-binding factor 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137 Identity = 259/281 (92.17%), Postives = 269/281 (95.73%), Query Frame = 0
BLAST of Spg023569.1 vs. NCBI nr
Match: XP_038888755.1 (telomere repeat-binding factor 4-like [Benincasa hispida]) HSP 1 Score: 485.0 bits (1247), Expect = 4.5e-133 Identity = 255/282 (90.43%), Postives = 268/282 (95.04%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy Swiss-Prot
Match: F4I7L1 (Telomere repeat-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=At1g17520 PE=2 SV=2) HSP 1 Score: 244.2 bits (622), Expect = 1.8e-63 Identity = 149/301 (49.50%), Postives = 189/301 (62.79%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy Swiss-Prot
Match: F4IEY4 (Telomere repeat-binding factor 5 OS=Arabidopsis thaliana OX=3702 GN=At1g72740 PE=2 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.2e-57 Identity = 138/299 (46.15%), Postives = 179/299 (59.87%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy Swiss-Prot
Match: Q8W119 (Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 7.2e-57 Identity = 138/286 (48.25%), Postives = 170/286 (59.44%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy Swiss-Prot
Match: Q6WLH4 (Single myb histone 3 OS=Zea mays OX=4577 GN=SMH3 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.3e-55 Identity = 136/286 (47.55%), Postives = 170/286 (59.44%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy Swiss-Prot
Match: Q8VWK4 (Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.1e-36 Identity = 112/278 (40.29%), Postives = 144/278 (51.80%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy TrEMBL
Match: A0A6J1GCH5 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111452883 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138 Identity = 260/281 (92.53%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy TrEMBL
Match: A0A6J1KEM4 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111493151 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 3.0e-138 Identity = 259/281 (92.17%), Postives = 270/281 (96.09%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy TrEMBL
Match: A0A6J1J017 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111479985 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130 Identity = 251/282 (89.01%), Postives = 264/282 (93.62%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy TrEMBL
Match: A0A0A0LDD1 (MYB transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G848130 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130 Identity = 253/283 (89.40%), Postives = 266/283 (93.99%), Query Frame = 0
BLAST of Spg023569.1 vs. ExPASy TrEMBL
Match: A0A5A7SZW3 (MYB transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00470 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 6.6e-130 Identity = 252/283 (89.05%), Postives = 266/283 (93.99%), Query Frame = 0
BLAST of Spg023569.1 vs. TAIR 10
Match: AT1G17520.1 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 243.8 bits (621), Expect = 1.6e-64 Identity = 149/301 (49.50%), Postives = 189/301 (62.79%), Query Frame = 0
BLAST of Spg023569.1 vs. TAIR 10
Match: AT1G72740.2 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 229.2 bits (583), Expect = 4.2e-60 Identity = 137/293 (46.76%), Postives = 179/293 (61.09%), Query Frame = 0
BLAST of Spg023569.1 vs. TAIR 10
Match: AT1G72740.1 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.0e-58 Identity = 138/299 (46.15%), Postives = 179/299 (59.87%), Query Frame = 0
BLAST of Spg023569.1 vs. TAIR 10
Match: AT1G49950.3 (telomere repeat binding factor 1 ) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37 Identity = 112/278 (40.29%), Postives = 144/278 (51.80%), Query Frame = 0
BLAST of Spg023569.1 vs. TAIR 10
Match: AT1G49950.2 (telomere repeat binding factor 1 ) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37 Identity = 112/278 (40.29%), Postives = 144/278 (51.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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