Spg022586.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg022586.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 4352862 .. 4354190 (-)
Sequence length369
RNA-Seq ExpressionSpg022586.1
SyntenySpg022586.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTACCTTCAATCATACGAAAAGTGTGAACTCTATGATTGACTTTGATGCAAACTTTACATCTGATCTTGACATGATTTATTTTGATGGCTTATCATCAGTTCAATCATTTGAGAGAATGAAAGAAGTTTGCTTGGTCAGGAGGATTCAAAGACGTGGGTTGATGCCAAATATTACATTCCTAGAAAGTTGACGTTCAACCAACCCCGGGGGTCATTTAAGAGCTTGACAGTACAGCTACGGCTCCATCTCTTCCATAGCATCGATGTAAGAATCCCTTTTCATTGTTATCATCCGAAGCTTTTTATTTGTGTGGCTGACATTGCTTTGTTTATCCTGGGCTTCAGATTCCATCTTCTTTGTACTTGTTATGATTCTTGGTATTCAGTCTATGGATCATCTCCCTTGACAGATCATTCTTTACCTTCTTTCTTCTTCTCTTTTACTAATTTTTTTTCTCCTTTTCAAGGATTATGATGAAATCCCCACGGGCTGGTCTGATGGTCGTTGGGCCAATGAAAAAAACAATGGACTTAGAAGGAATGGATTCAAAATCAGGATGGCTACTATTTCGTTGGAAACACAATGTAATTGATCTAGTACTTGTCCCTTGAGATCAGCCGAAACGTGCTTTAGTCAGCTTGTATACTTGTGAATATATATATTATAAAATGGTAATTCAACATAATTAAGCAATATTTGGAAGCTGTGGAGCTAGGAAGCCTCCTCTACTATTTATATGGGATACCGGTTCCGAACTTGAATATTAGATACCAGTTCAATCCCATTTTTTCTTACATTTTAGGTTATTAAAAAATAGGCAATTCCAAAGTTATAGTGTATAAACAACATATATATTTAGTTAAATGAGATTGGACTATTAAAATTTAAAATAATCATTTACTATTTTTAAAATAACTAATCTGGTGAAAAAAAATCAATAATTTTTAGTCATAGGTTTAAAAACTTATAATACATTCAAAAAATGATTTTTGAAAGTACCGATTCATTTATTCTCGACCTCAACTTCTTTCATTGTCCTATATGGTGTGGGTTTCTCTTTGGAAACATATCATTTCTACTAATCACCATTTTGTCTTGACAACTTCCACCGTTCTAAAGTAAGAAAAACAAATTACTCGGAAATCGTTTAAACATAACAAAGTTACAAAATTTAACTTTCAGTGAAAAATTGAAAGTAAAATTGTTAACAGTACAAAAGAAGATTAATGGGGCTGACCTGATCTCTTCCATGGAAGTCATTCGTATGGCTGCGGCATTGGGTTTCTGCTCTGCCCAGAAGAAACTGAAGCAAATGAATTGA

mRNA sequence

ATGGCTGTTACCTTCAATCATACGAAAAGTGTGAACTCTATGATTGACTTTGATGCAAACTTTACATCTGATCTTGACATGATTTATTTTGATGGCTTATCATCAGTTCAATCATTTGAGAGAATGAAAGAAGTTTGCTTGGATTATGATGAAATCCCCACGGGCTGGTCTGATGGTCGTTGGGCCAATGAAAAAAACAATGGACTTAGAAGGAATGGATTCAAAATCAGGATGGCTACTATTTCGTTGGAAACACAATTACAAAAGAAGATTAATGGGGCTGACCTGATCTCTTCCATGGAAGTCATTCGTATGGCTGCGGCATTGGGTTTCTGCTCTGCCCAGAAGAAACTGAAGCAAATGAATTGA

Coding sequence (CDS)

ATGGCTGTTACCTTCAATCATACGAAAAGTGTGAACTCTATGATTGACTTTGATGCAAACTTTACATCTGATCTTGACATGATTTATTTTGATGGCTTATCATCAGTTCAATCATTTGAGAGAATGAAAGAAGTTTGCTTGGATTATGATGAAATCCCCACGGGCTGGTCTGATGGTCGTTGGGCCAATGAAAAAAACAATGGACTTAGAAGGAATGGATTCAAAATCAGGATGGCTACTATTTCGTTGGAAACACAATTACAAAAGAAGATTAATGGGGCTGACCTGATCTCTTCCATGGAAGTCATTCGTATGGCTGCGGCATTGGGTTTCTGCTCTGCCCAGAAGAAACTGAAGCAAATGAATTGA

Protein sequence

MAVTFNHTKSVNSMIDFDANFTSDLDMIYFDGLSSVQSFERMKEVCLDYDEIPTGWSDGRWANEKNNGLRRNGFKIRMATISLETQLQKKINGADLISSMEVIRMAAALGFCSAQKKLKQMN
Homology
The following BLAST results are available for this feature:
BLAST of Spg022586.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022586.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022586.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022586.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg022586Spg022586gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg022586.1-cdsSpg022586.1-cds-scaffold2:4352862..4352971CDS
Spg022586.1-cdsSpg022586.1-cds-scaffold2:4353599..4353716CDS
Spg022586.1-cdsSpg022586.1-cds-scaffold2:4354050..4354190CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg022586.1Spg022586.1-proteinpolypeptide