Spg021972.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg021972.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 8888774 .. 8890405 (-)
Sequence length906
RNA-Seq ExpressionSpg021972.1
SyntenySpg021972.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTCCTCTCTCCTCTCTCCTCCCTCCCCCACCACCCCATCCTCTAGATCTTAGCTCGGCAGCCATGGCCACCACTAATAGGAACACACCATGGAACCACTCCACTAGATCGATCTCCAGTGACATAAAGACATTCTCCATAGCTTTTGATGAATCTTCTCGAGGAAGTAAGGCGAAAATCACATAACACAGTTGGACCTCCTCTCATTCATTGGCCCTCACTTGGAAGTCCCTCAATTGGCTTGCTTCATCCTTCAATACTCTTGCCCATGAATCGTGCTCTTATAAATTTCCCTCTAAGATTAGGGGTGATGACTATGTCCTTTGGGTAGAAAAACTCAGCAACAAGCATGAATTCTTTGGGGAGATTAACCAACTGCTTAATTCTAGTGGTCGGTGTCAACCGTTGATATCCCGCACGGGTTAGTGAAAATGAGATTATAATCATCCAACGATGTCAACAAAGAGATGACTGGCCTTCAATTCGCGATTCCATCATGGCCGGCATATCCAATCGATGCTCCATCAACCCATTTCAGGACAATAAAGCTTTGTTACATTTATATGACACTTAGACTGCGGCCAATCTCTGTAAAACCAAGGAGTGGACTTCCATTGGCAAATTCCGGCTGAAATTCTACCCATTAACACTACAGACTCTTATTATCCAGATTGTATGACCAACTCATATGGTGGTTGGATTGAAGTTCTTAATCTGCCTTAACCATTATGGACAAAGGAAATTTACCAATACATTGGAGACTGATGGGGAGGATTCATTGACACTTCAAATCATACTAGCCGCAAACTAAACCTCACATCAGCAAAATTGAAGATCTGATCGAACTCATTTGGTTTCATACCGTCCATGATTGTGCTTCCTCCCTCCATAGTCGACGGTGATGTTACTATGCATCTCCGGGGGCTGACGACAAGCGCAACAAATCAGTCGAGAATAGCAGATTTCCCCCCAATTTTGGGTTCGAATCATTTGGAAATTAAGAAGAAAGAGAATGGGGATATGCAAATTTTGAAATCGATTCAGAAATCGCCTGATATAACTCCAATTTTGCCCCCTAAGGAAGCGGTTTCTACATTTATTCTAGACTTACCAAAATCGCAACACTTGTCAAATTTTCCATCTCAATCCTCTGAAGGAAAAGCCCCCATGCACGCAACCTCTGAAGATAATGGGCTTGTTTCCCTTCCTGCTCGGCCCACTACTCTCCAATTAGAAGGATCGACTTCACGACCTTTGGACCAAGGAACTGACACCAAAGCATACATTTCAAGCCCATCCATTGCACACTCGAACAAATCCAATAATTCTACCGTTGACCCAACCACACCCCGTTTTGACCTCGTCTTATTTGATGAACCACAACCTGACTTGAACCACCAAGCTCCCTTAGCTTCCATACCACCGCCATCCTTTATCATCCCCTCTCCCACAAACAAGACTTTTGAAGCTCATCCAGTCCAACCATATACTCCTCTCCAACAACCAACTAATTCACCAACCGAGCCACCATCCCATTCCCTCCTATCATATCTCTGTCACCTAGCCTCACTGCTTACTAAGCATGGATTATATATCACAGCACTTCCAACTTCTTCAATGCCCTGA

mRNA sequence

ATGCTCTCTCCTCTCTCCTCTCTCCTCCCTCCCCCACCACCCCATCCTCTAGATCTTAGCTCGGCAGCCATGGCCACCACTAATAGGAACACACCATGGAACCACTCCACTAGATCGATCTCCAGTGACATAAAGACATTCTCCATAGCTTTTGATGAATCTTCTCGAGGAATCGACGGTGATGTTACTATGCATCTCCGGGGGCTGACGACAAGCGCAACAAATCAGTCGAGAATAGCAGATTTCCCCCCAATTTTGGGTTCGAATCATTTGGAAATTAAGAAGAAAGAGAATGGGGATATGCAAATTTTGAAATCGATTCAGAAATCGCCTGATATAACTCCAATTTTGCCCCCTAAGGAAGCGGTTTCTACATTTATTCTAGACTTACCAAAATCGCAACACTTGTCAAATTTTCCATCTCAATCCTCTGAAGGAAAAGCCCCCATGCACGCAACCTCTGAAGATAATGGGCTTGTTTCCCTTCCTGCTCGGCCCACTACTCTCCAATTAGAAGGATCGACTTCACGACCTTTGGACCAAGGAACTGACACCAAAGCATACATTTCAAGCCCATCCATTGCACACTCGAACAAATCCAATAATTCTACCGTTGACCCAACCACACCCCGTTTTGACCTCGTCTTATTTGATGAACCACAACCTGACTTGAACCACCAAGCTCCCTTAGCTTCCATACCACCGCCATCCTTTATCATCCCCTCTCCCACAAACAAGACTTTTGAAGCTCATCCAGTCCAACCATATACTCCTCTCCAACAACCAACTAATTCACCAACCGAGCCACCATCCCATTCCCTCCTATCATATCTCTGTCACCTAGCCTCACTGCTTACTAAGCATGGATTATATATCACAGCACTTCCAACTTCTTCAATGCCCTGA

Coding sequence (CDS)

ATGCTCTCTCCTCTCTCCTCTCTCCTCCCTCCCCCACCACCCCATCCTCTAGATCTTAGCTCGGCAGCCATGGCCACCACTAATAGGAACACACCATGGAACCACTCCACTAGATCGATCTCCAGTGACATAAAGACATTCTCCATAGCTTTTGATGAATCTTCTCGAGGAATCGACGGTGATGTTACTATGCATCTCCGGGGGCTGACGACAAGCGCAACAAATCAGTCGAGAATAGCAGATTTCCCCCCAATTTTGGGTTCGAATCATTTGGAAATTAAGAAGAAAGAGAATGGGGATATGCAAATTTTGAAATCGATTCAGAAATCGCCTGATATAACTCCAATTTTGCCCCCTAAGGAAGCGGTTTCTACATTTATTCTAGACTTACCAAAATCGCAACACTTGTCAAATTTTCCATCTCAATCCTCTGAAGGAAAAGCCCCCATGCACGCAACCTCTGAAGATAATGGGCTTGTTTCCCTTCCTGCTCGGCCCACTACTCTCCAATTAGAAGGATCGACTTCACGACCTTTGGACCAAGGAACTGACACCAAAGCATACATTTCAAGCCCATCCATTGCACACTCGAACAAATCCAATAATTCTACCGTTGACCCAACCACACCCCGTTTTGACCTCGTCTTATTTGATGAACCACAACCTGACTTGAACCACCAAGCTCCCTTAGCTTCCATACCACCGCCATCCTTTATCATCCCCTCTCCCACAAACAAGACTTTTGAAGCTCATCCAGTCCAACCATATACTCCTCTCCAACAACCAACTAATTCACCAACCGAGCCACCATCCCATTCCCTCCTATCATATCTCTGTCACCTAGCCTCACTGCTTACTAAGCATGGATTATATATCACAGCACTTCCAACTTCTTCAATGCCCTGA

Protein sequence

MLSPLSSLLPPPPPHPLDLSSAAMATTNRNTPWNHSTRSISSDIKTFSIAFDESSRGIDGDVTMHLRGLTTSATNQSRIADFPPILGSNHLEIKKKENGDMQILKSIQKSPDITPILPPKEAVSTFILDLPKSQHLSNFPSQSSEGKAPMHATSEDNGLVSLPARPTTLQLEGSTSRPLDQGTDTKAYISSPSIAHSNKSNNSTVDPTTPRFDLVLFDEPQPDLNHQAPLASIPPPSFIIPSPTNKTFEAHPVQPYTPLQQPTNSPTEPPSHSLLSYLCHLASLLTKHGLYITALPTSSMP
Homology
The following BLAST results are available for this feature:
BLAST of Spg021972.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg021972.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg021972.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg021972.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg021972Spg021972gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg021972.1-cdsSpg021972.1-cds-scaffold2:8888774..8889507CDS
Spg021972.1-cdsSpg021972.1-cds-scaffold2:8890234..8890405CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg021972.1Spg021972.1-proteinpolypeptide