Spg018947.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg018947.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold12: 26918704 .. 26920186 (+)
Sequence length603
RNA-Seq ExpressionSpg018947.1
SyntenySpg018947.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCTTCGATGTGCAGCGGCGGCTGGAGGTGTTGTGCAGACCGCTGGCGTTTCAGCGATTTGGGGTTCGTTTCTCTTGAATTTTTCATTCTCAAGGTCAGTTTCTTTCATCCCTTTCGTTCTCTGTCTCACTCATGACCTTCCCCTCTGTTTTTCCGACAAGATTCAGACTCATAAAGGCTATCAACGTGGGTTCTGGCGGCTGTGTTGTTTAGGAGCGCAAACAACAGTAGTTTCGGGTCTTTCAGGGCGCTTTTCTGGCGATTTCAAGTGTGGGTAAGTGAGATAATTAAAGTTTTGGTTAATACAAGTGTGTAGGAAGGTTACCCATTAGTTTTCGCCTTTGATTTCAAGGTTCCCTTTGCTTGTAGAGGTTTAATTGTCGTTTGGAGCGGAATTGTTAGCCCGGACAACAAGCTTCGTTTCTGTTTTTAGGTGAGTTTTGGGTGTTACACCATCCCAAAATTTACTTTGGCTTGTAGGTGTGCGTTTGGTATAAAACTCCTTTTGATTTGAGGATGTTTGTCCCACTTTGTGTAGTTGGATAGGGGCTTGGAAGCTAAGGAGTTATTGTCTTGGCAAGTAAACTAATTAGCTAAGGTAAGTAGCTAATGGACTCAATTTTCGAGCTTTAGACCCATTACATGATTGATGGATTCGATTAAGTCAAGTTTCATGTTTTAACTAATTTCCTTTGTGAATTTAGCATGCTTGTAAGAGTTAGTTTAAGTCTTGTGTTTGCTTATGGATTTAAAGGAGTTAGTTTAAGAGTTGCATTGCGAAGTATAATGTGGGCATGGAATGTGGTTTATTAATTATAGCATATCTAAAACTACTTCTGGATGGGTTATTACCTTTTGGGTTCATTTTGAAAGCATGTTTGATTGTATGGATTTGTTGCTCTGAATATCATGATAGTTGTGGATGTGAGGTCTATCTCGCTTTGGTTGTGGTAGATCGGAGTACCCTGAAGTTTGTGGTTGGGTTGTGTTGATTATAGAAGTGTTTTATCCGCTTTTCAGGTGAATAGAAAAATTTGGGGTTTACCTTATGTATGCCATTATGCTGTTGAATTTTTGGTAGCACTACAACAGAAGTGAGGCTAAGCTTAGTAGAACCCCCCTGATTAGGCTAAGCTTAGTAAAATCCCTCGATACGTTACGCTTGATAATCGTACGTATGAAGAGGACAAGACCTAGAATAGGAGCCTTAGATGCGATTCAGGGCCTCAGGTAAACTTAGCAGATCGTTAAGCCTTGTGTCAAGCTAGGGTCGTTTCCTTCCCCATCTTAGGATACTGATGGAACTTACCTACAGGCACGTGATCGTGCACTCTATCAGTGACTGGTAGAGCGTACTTTTCTGGCATGGGATCGTGCAATCCATCAGGACGGTGTCGAACTTGGCACATGATTGTGCTCCAGATGGCATTCAGGCATGCTTCATGCCCAGATTGCTCCATCGTACTTTGATTTCATGA

mRNA sequence

ATGGTGGCTTCGATGTGCAGCGGCGGCTGGAGGTGTTGTGCAGACCGCTGGCGTTTCAGCGATTTGGGGTTCGTTTCTCTTGAATTTTTCATTCTCAAGACTCATAAAGGCTATCAACGTGGGTTCTGGCGGCTGTGTTGTTTAGGAGCGCAAACAACAGTAGTTTCGGGTCTTTCAGGGCGCTTTTCTGGCGATTTCAAGTGTGGCATGCTTGTAAGAGTTAGTTTAAGTCTTGTGTTTGCTTATGGATTTAAAGGAGTTAGTTTAAGAGTTGCATTGCGAAGTCTATCTCGCTTTGGTTGTGGTAGATCGGAGTACCCTGAAGTTTGTGGTTGGGTTGTGTTGATTATAGAAGTGTTTTATCCGCTTTTCAGAAGTGAGGCTAAGCTTAGTAGAACCCCCCTGATTAGGCTAAGCTTAGTAAAATCCCTCGATACGTTACGCTTGATAATCGTACGTATGAAGAGGACAAGACCTAGAATAGGAGCCTTAGATGCGATTCAGGGCCTCAGGACGGTGTCGAACTTGGCACATGATTGTGCTCCAGATGGCATTCAGGCATGCTTCATGCCCAGATTGCTCCATCGTACTTTGATTTCATGA

Coding sequence (CDS)

ATGGTGGCTTCGATGTGCAGCGGCGGCTGGAGGTGTTGTGCAGACCGCTGGCGTTTCAGCGATTTGGGGTTCGTTTCTCTTGAATTTTTCATTCTCAAGACTCATAAAGGCTATCAACGTGGGTTCTGGCGGCTGTGTTGTTTAGGAGCGCAAACAACAGTAGTTTCGGGTCTTTCAGGGCGCTTTTCTGGCGATTTCAAGTGTGGCATGCTTGTAAGAGTTAGTTTAAGTCTTGTGTTTGCTTATGGATTTAAAGGAGTTAGTTTAAGAGTTGCATTGCGAAGTCTATCTCGCTTTGGTTGTGGTAGATCGGAGTACCCTGAAGTTTGTGGTTGGGTTGTGTTGATTATAGAAGTGTTTTATCCGCTTTTCAGAAGTGAGGCTAAGCTTAGTAGAACCCCCCTGATTAGGCTAAGCTTAGTAAAATCCCTCGATACGTTACGCTTGATAATCGTACGTATGAAGAGGACAAGACCTAGAATAGGAGCCTTAGATGCGATTCAGGGCCTCAGGACGGTGTCGAACTTGGCACATGATTGTGCTCCAGATGGCATTCAGGCATGCTTCATGCCCAGATTGCTCCATCGTACTTTGATTTCATGA

Protein sequence

MVASMCSGGWRCCADRWRFSDLGFVSLEFFILKTHKGYQRGFWRLCCLGAQTTVVSGLSGRFSGDFKCGMLVRVSLSLVFAYGFKGVSLRVALRSLSRFGCGRSEYPEVCGWVVLIIEVFYPLFRSEAKLSRTPLIRLSLVKSLDTLRLIIVRMKRTRPRIGALDAIQGLRTVSNLAHDCAPDGIQACFMPRLLHRTLIS
Homology
The following BLAST results are available for this feature:
BLAST of Spg018947.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg018947.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg018947.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg018947.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg018947Spg018947gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26918704..26918802CDS
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26918876..26918982CDS
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26919413..26919489CDS
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26919638..26919728CDS
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26919801..26919938CDS
Spg018947.1-cdsSpg018947.1-cds-scaffold12:26920096..26920186CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg018947.1Spg018947.1-proteinpolypeptide