Spg018609.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg018609.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold3: 4702862 .. 4708305 (+)
Sequence length	1284
RNA-Seq Expression	Spg018609.1
Synteny	Spg018609.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAACGAGAGGTATGAGAGAAAGAGAGATTGAAGTGGAAGAGGTGCCAATTACACCGGAGGCACCTAAGAAGAAGAGGAAAAAGAAAAAGACTCCGAAAGAGAAGGAAGCTCATTGGATGAAAAGGCAGCAAGATTCGCCAGTTACAGAGGTCCTTCAGCAGGTTCTTGAAGACATTGCTGATGAAGTTGTGCGAGAAGAGCAACTAAAAACTCTTGAAGTAGAAAAGGTTCCGGAGCAGAGTGATCAACAAGCTGAGGATCAGCAAGAGGTTCAAGAACGTTAGGAAGTGGTATAGGAAGAGGTAATGTCGGTTCAACCGCCACGTCGTCGCCGCCGCAAGCAAAAGGTAGGACGGATCAAAAGAATCCAGACGGATACTCTATCGATGAGGAAGAAGGATTTCAGGCAATTGTTCATGGTGTAGCAGTAGACTGGAGCCCTGGAGTGATAAATTCTTTATTCAACCTACAGGATTTCCCCAATGCTGGATATAATGATATGGCAGCAGCACCATCTAACGAGCAGCTAAACGCGACTATTTGAGAGGTGGGGATAGAAGGGGCTCAATGGCGGCTTTTGAAGACGGAAAAGAGGACTTTTTAGGATTCCTATCTCAAGGTGAGGAAAATACATGGTTAGGATTTGATAGGAAACATAAATTTTGCTATTTTGTCTTTGAATTTAATAGCTTTTGATGTGCTTTATTGTGTTTTTATTATATAAATTCGTTTAATTGATTAATTTTGGTCCCTAGGAATTTTGGTGAAAAATTGGAGAAAAAGCCCAAAATATTGAAGTTGAATCCATGGAGAACAAAGTGGGTCAAGTGGGAGAAGTCCAAGACCCATCGTGGAAGACAATTGGGCCAAATAATGGAGGAGAGCCAAAAAATCAGCCTTGAAACGCAAGCTGGAAAGTCCCAGCCAAAGGACGCCGTCTTGATGCTGTGTTGTCTTGCCGTCCAAGCATATTACGTCACAACGTCGCAACGGGAAGGATTTTGAGGCCTATAAAAGGCGCGACTCTCTCCCCATTTTGGGCATCAAGCAATCATCTTTTCCTCTCTTTTAATCCTTTCAAGGCTCTTTGACCCACCTTTGAGGGTTGAGTTGTGAGGAGAGTTAAAATTCTTGTATTAGGCATTTTTTGGAGTGCTCGGGAGCTTGTAACGGGAAGGATCCAAGGCGCAAGTGAGGGGTTCTTCTACGGTTCATCTTCTAACTCCTTATTTGTTCATTTTAATGCTTTCCATTATATATAGACGAGAAATTTTTGTATACATGTACAGCTAAATCTCAGATTGCGGGTCTTGAATGAAAGAATATAGTTGAATGTTATTTTAATTGGCTATCTTTGTGTCCATTTACTGATTATTTGTGTCGGTATTCGTAATGCTCTATAGATTCTGGCCAAATTTATAGTGATTAGATTCTTAATGGAAACTCGACGGAGTGAAATTAAGATAGATCATAACCCAGTCAACTATGCTTAACTGCTCGTAGTGACAACGAGAGTAGTTGGTTAGGCTTAGAGATCGATAATGAATCAGAGCTCATTAATTAACCCGTTTAATAACGCTAAGGACACCGAGGTTATAAAAATTAGTTAGTTATAATTAGAGGAAACCGACAGGAGAACCTATGTAATTAACGAAGATTCTAGATCTATAATTAGTCGGGCACAAGATTAGGTAATTAGAATAACTAGTAAGCTATATTTTTTATTTCAAGACCCCACCTCTCATTCAACTCTATCTTCATTTTTGCCACTTTGCTTGATCAATTTATTTTACTACCTGACTTTAGTTTCGATTGCATCTTTCATCATGATTATGTCTTTAAATAATATTCAGTTTTAGTATTTTTAGTGCTTAGTTTATTATCTTGTCTGAACTTAATCTTCCCTGTGGAATCGATACTCGGTACTCTACCGTTTTATATTATTTGTGGCAACCGTACGCTTGCGAAAACCCAACAGGATTCGTCAAGCTGCGTCTACTGCCAACAACACATGATTCATATGTCTCCCGTGATCGCGTTCTCCTGGTTTTCGCTATATTGAGATCATTTAATATAGATGTCGACAAGATCATCTCCAGCGAGATTTTTGGATGTTGGAGGAAGAAGGTGGGCAAGTTGTTTTTCCTTAATACCATTACAATGTTGTGCCAAAGGGCAGGGGTTTCCACAAGCGCTGAAGATGTCATTCTGATGGACAAGGGGATAATGGACACACCGAACTTGGCAAGACTACAAAGTATGCAGGAAGCTCGCCAAGGCGGTTTGGTGTGTGGCATCGACAACATTCACGAACAACTCCAACTACAAGCCAGTCGGATGGAGATTGTTGAGAGGCAAGCCCAAACGTATTGGAATTATGTTAAAAGGAGGGATGCCACGATTAGAAAGGCTCTACAATCAAATTTTTCAAAGTCGTATCCAACCTTCCCTGTTTTCCCCGATGATCTATTGAACCCCTGGATCCCACCATTGCCGATTGAACGAGAACAGGAAGAAGAGGACCTTGGTCAGGAGGATTAGGAAGAAGGAAGAAGAATGTTGCCAACATTAATTTTGTTGAATTATTTTTGTTGCTCGCGTGATTTCCTGGCGAAGTTGTTTTTGCTGTTTCTAATTTTGCTTTTTCTGTTTTTATTTTTTGTTTCTGCTGGCCTGAAAAAAATTAATCTCTGATATTGTAAATCTTTTTCTATTATCATAATGAAAATTTTGAAGTTTCTTTTCTATGGCACACCTGAGTATTCCTAACTTAACATTTTCTTCTGAATTTTTGAAACCTGGACTAGTTAGCTTAATTAGATCAAGGTATTTTGATCTCCATAAACCTTTTGCTTGAGCATTTCTTCTAGCCTGCTCTTCGCTGCGGAAAGAAGTTCTGAGGTAGCATTGTCTTATTTGATCCACTGTAAGCTTAGTCTTAGTCCCACGCTTAGTTTAAAATTCAGATTGAGAAAAAGTTAAGTTTGGGGGGAGGTATTTATATGTTGCTAATTCAATGGGGACAATGAATAATTTAAGTTTGGGGGACTTAGAGGCACTCCTCTTGTTTTACTTGAGCATTCCTCTCCTTCATAATATTTTTTCTAGGTTGTTGAGTAACCAGGGAGATTTGTGACACCCACAGTTTGTCTTTGCGTCAAAAGGTGGCCTAGGAAATATTGAAAAAAGAATGATGAAAAGATATATATGTTGAAAAGAAAATTGAAATTTTTGCTGAAAAAATTGAAAGAGCAAAACTTTTTAAAGATGAATGATAATCTGGCAGTTTTCTATCTCCCAGGGCTGAGGTGAGCTTCATCACAACATGTCGTCATTCTGAGAAGCAAGAGAGATAGATAACTAAAGATTTTTGGGTTTAGCAATGAATGTTTAGCCTAGTTGGTGATAAGCTTGAGGCAAGGGTATAATGCATCATAAAATGGGTCATCTCATGCTTAAGAGCTTATGACTGTAGGGTTGCTTTAAGTCTGAAGAACAAAAGAATGGATCCCCTAGGAAAAAGTTGTTATGAATATATGATAATATAGTTGGGCTGTGGTAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTTGTTCAATGCTAAAAGAACTACTTTGCTGTAGCAATGCGTGGTTCTGCAGGATGCTCAGGTAAAGGTTGAAGGCAGTGTTGGATTATCTGTTTTAATTGAGTTGTGCTATGATCAATGTTTTGAAATTTCAGAGAAGATGAGTTAGTATATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGGTTTGATAACTCTCCAAAAGGGAGTTATTTAGGCATTATTTCTATGATGATTTTGTTGGGATAGGTTCCTTAAAACTCGTAGATAGTGAGTGTTAAACGAATTACATGTTCGATAAAGTCGTTATCTTGATTCATTTAGTAAAGTCGTTTTTGAATAAGTAAATTGCACATTAGATAACCCAAATCCAATAAACTAAGATCCTTGGCTATAGGATGAAAACTTGAGCTTTATGTAGAGACATAAAAGTGGATCAAACTCAAGTAATAGCCAAAACGGTCTATAGTATAGGGATAGGGTTGGGTACCTTATCCTGGGGACACTATGAGACGCAACCCACTTTGTAGATAGTACAGACGATGTGATCCTAAATCGTCTATGTAGAGACATGCGAGAGGGGGCGTCCTATGCAATGAGTATGCATAAGACCAGGACCGAGAAATAAGTCTCTCTTTCTTTATAACGTTGTTTACTGACAAGATTGACTATTTCATGTGATAACCTTGGTAACTCGATCTTAATCCTTAGCTAACTATGAACTCCTGTTTATTCGGGCTTATCGTTAGATCTGCATGGGTGAGAGTTTGAGACCAAAATCCAGCAGCATAACAATATGGAAATGGCTCTCTTAACTCTTAATCTGATTTTGCATATACTTATAGAGATATTCCATGCAAGGAAAGGCCTCAAGATGCAAGACACATGGTGGTAATGCAAGCAAAAGTGGATTCTAGGTGTTGAAGTCACAACACATGCAACAAGTGCATGGATGTGTTGTATTCCACTTTGTATCAACATGCAAGAGTGGAAATCCATCTAAATCCACTAAGTTTGATCCTCAATCAGATTTTGCTTGCATTCTAATTCAAATTCCAATTCCAAATTGAAATTGATTTCATGGCAATTAATTAGAAACATTTCCAATTAATTTGTTATGATTAATCCAATTAATCATTGACACCTTGTGCAATCTAATTATATATGATTCCTAATTCATATATAGTATTTAAAACACTTTTAAATATATAATCTCTCATTTTCCAATTTAATTCATAATTAAATATTGTGTCAAACACAATTTACGAAAATGCCCTTTTTCCCGATTTTGAACAATTCAAAGAATCCTATCTTATTGTTCTGGGCTTTATTCCGATATGAGCTAGTAGGGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATTCGAGGCTAACCGACTAATCTCATTAACCAAGCTTAACCAACATTCGTTAACTACCGAGACACTCCACTATAGCCCGATAGTTGCACTCCCCTCACTATAGATATATTTCCGTCCACTTGATTTAACCACGATTAGTAAGTCGATCCTTAACAGGTTGTTCGTAACTATAGCTGGGTCAAATGTCCGTTTTACCCCTATAGTACTTCTTGTTCCTTAAGTCCCACTGATCCTCTAATGAACAATTGGTTTATGGTCCAACCAACAAATCGAGTCCCTCTCGGGCCAATGAGATGGCGGGATCCCTTTGTTCAACCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAGTGAATTCCTTCTCGCACGACTATGTCCCCAGCTATCTACCCGTTCCTCTCCCTGAAATGGGAAGCTTATTGAGTCGGCGATACTGA

mRNA sequence

ATGGCTAAAACGAGAGGTATGAGAGAAAGAGAGATTGAAGTGGAAGAGGTGCCAATTACACCGGAGGCACCTAAGAAGAAGAGGAAAAAGAAAAAGACTCCGAAAGAGAAGGAAGCTCATTGGATGAAAAGGCAGCAAGATTCGCCAGTTACAGAGGTCCTTCAGCAGGTTCTTGAAGACATTGCTGATGAAGTTGTGCGAGAAGAGCAACTAAAAACTCTTGAAGTAGAAAAGGTTCCGGAGCAGAGTGATCAACAAGCTGAGGATCAGCAAGAGGTTCAAGAACGATTCGTCAAGCTGCGTCTACTGCCAACAACACATGATTCATATGTCTCCCGTGATCGCGTTCTCCTGGTTTTCGCTATATTGAGATCATTTAATATAGATGTCGACAAGATCATCTCCAGCGAGATTTTTGGATGTTGGAGGAAGAAGGTGGGCAAGTTGTTTTTCCTTAATACCATTACAATGTTGTGCCAAAGGGCAGGGGTTTCCACAAGCGCTGAAGATGTCATTCTGATGGACAAGGGGATAATGGACACACCGAACTTGGCAAGACTACAAAGTATGCAGGAAGCTCGCCAAGGCGGTTTGGTGTGTGGCATCGACAACATTCACGAACAACTCCAACTACAAGCCAGTCGGATGGAGATTGTTGAGAGGCAAGCCCAAACGTATTGGAATTATGTTAAAAGGAGGGATGCCACGATTAGAAAGGCTCTACAATCAAATTTTTCAAAGTCGTATCCAACCTTCCCTGTTTTCCCCGATGATCTATTGAACCCCTGGATCCCACCATTGCCGATTGAACGAGAACAGGAAGAAGAGGACCTTGCCTGCTCTTCGCTGCGGAAAGAAGTTCTGAGGGCTGAGGATGCTCAGGTAAAGGTTGAAGGCAGTGTTGGATTATCTGTTTTAATTGAGTTGTGCTATGATCAATGTTTTGAAATTTCAGAGAAGATGAATCTGCATGGAGATATTCCATGCAAGGAAAGGCCTCAAGATGCAAGACACATGGTGGTAATGCAAGCAAAAGTGGATTCTAGTCCCACTGATCCTCTAATGAACAATTGGTTTATGGTCCAACCAACAAATCGAGTCCCTCTCGGGCCAATGAGATGGCGGGATCCCTTTGTTCAACCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAGTGAATTCCTTCTCGCACGACTATGTCCCCAGCTATCTACCCGTTCCTCTCCCTGAAATGGGAAGCTTATTGAGTCGGCGATACTGA

Coding sequence (CDS)

ATGGCTAAAACGAGAGGTATGAGAGAAAGAGAGATTGAAGTGGAAGAGGTGCCAATTACACCGGAGGCACCTAAGAAGAAGAGGAAAAAGAAAAAGACTCCGAAAGAGAAGGAAGCTCATTGGATGAAAAGGCAGCAAGATTCGCCAGTTACAGAGGTCCTTCAGCAGGTTCTTGAAGACATTGCTGATGAAGTTGTGCGAGAAGAGCAACTAAAAACTCTTGAAGTAGAAAAGGTTCCGGAGCAGAGTGATCAACAAGCTGAGGATCAGCAAGAGGTTCAAGAACGATTCGTCAAGCTGCGTCTACTGCCAACAACACATGATTCATATGTCTCCCGTGATCGCGTTCTCCTGGTTTTCGCTATATTGAGATCATTTAATATAGATGTCGACAAGATCATCTCCAGCGAGATTTTTGGATGTTGGAGGAAGAAGGTGGGCAAGTTGTTTTTCCTTAATACCATTACAATGTTGTGCCAAAGGGCAGGGGTTTCCACAAGCGCTGAAGATGTCATTCTGATGGACAAGGGGATAATGGACACACCGAACTTGGCAAGACTACAAAGTATGCAGGAAGCTCGCCAAGGCGGTTTGGTGTGTGGCATCGACAACATTCACGAACAACTCCAACTACAAGCCAGTCGGATGGAGATTGTTGAGAGGCAAGCCCAAACGTATTGGAATTATGTTAAAAGGAGGGATGCCACGATTAGAAAGGCTCTACAATCAAATTTTTCAAAGTCGTATCCAACCTTCCCTGTTTTCCCCGATGATCTATTGAACCCCTGGATCCCACCATTGCCGATTGAACGAGAACAGGAAGAAGAGGACCTTGCCTGCTCTTCGCTGCGGAAAGAAGTTCTGAGGGCTGAGGATGCTCAGGTAAAGGTTGAAGGCAGTGTTGGATTATCTGTTTTAATTGAGTTGTGCTATGATCAATGTTTTGAAATTTCAGAGAAGATGAATCTGCATGGAGATATTCCATGCAAGGAAAGGCCTCAAGATGCAAGACACATGGTGGTAATGCAAGCAAAAGTGGATTCTAGTCCCACTGATCCTCTAATGAACAATTGGTTTATGGTCCAACCAACAAATCGAGTCCCTCTCGGGCCAATGAGATGGCGGGATCCCTTTGTTCAACCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAGTGAATTCCTTCTCGCACGACTATGTCCCCAGCTATCTACCCGTTCCTCTCCCTGAAATGGGAAGCTTATTGAGTCGGCGATACTGA

Protein sequence

MAKTRGMREREIEVEEVPITPEAPKKKRKKKKTPKEKEAHWMKRQQDSPVTEVLQQVLEDIADEVVREEQLKTLEVEKVPEQSDQQAEDQQEVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFFLNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARLQSMQEARQGGLVCGIDNIHEQLQLQASRMEIVERQAQTYWNYVKRRDATIRKALQSNFSKSYPTFPVFPDDLLNPWIPPLPIEREQEEEDLACSSLRKEVLRAEDAQVKVEGSVGLSVLIELCYDQCFEISEKMNLHGDIPCKERPQDARHMVVMQAKVDSSPTDPLMNNWFMVQPTNRVPLGPMRWRDPFVQPPESALKGTTSLLSLIWVGVNSFSHDYVPSYLPVPLPEMGSLLSRRY

Homology

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BLAST of Spg018609.1 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-19
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL+ ++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 105 KVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFF 164

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL---------QSMQEARQGGLVCGI 211
            + IT LC+ A    + E   L + G +D   +AR+         Q    +R        
Sbjct: 165 PSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSR 224

Query: 212 DNIHEQLQLQA-----SRMEIVERQAQTYWNYVKRRDATIRKALQSNFSKSYPTFPVFPD 261
            N     QL+A     S+ E   +Q Q +W Y K RD  ++KALQ+NF++  PTFP FP 
Sbjct: 225 TNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQ 284

[Close]

BLAST of Spg018609.1 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 104.0 bits (258), Expect = 3.3e-18
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL++++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 46  KVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFF 105

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL--QSMQEARQ-------------- 211
            + IT LC+ A       +  L   G +D   +AR+  +   E  Q              
Sbjct: 106 PSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSR 165

Query: 212 --GGLVCGIDNIHEQLQLQ-------ASRMEIVERQAQTYWNYVKRRDATIRKALQSNFS 261
             G ++  +  + ++L  Q        S ++   +Q Q +W Y K RD  ++KALQ+NF+
Sbjct: 166 ANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFT 225

[Close]

BLAST of Spg018609.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 103.2 bits (256), Expect = 5.6e-18
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL+ ++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 175 KVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFF 234

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL------QSMQE------------A 211
            + IT LC+ A       +  L + G +D   +AR+      +S Q+             
Sbjct: 235 PSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNR 294

Query: 212 RQGGLVCGIDNIHEQLQLQ-------ASRMEIVERQAQTYWNYVKRRDATIRKALQSNFS 261
             G ++  +  + ++L  Q        S ++   +Q Q +W Y K RD  ++KALQ+NF+
Sbjct: 295 TNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFT 354

[Close]

BLAST of Spg018609.1 vs. NCBI nr
Match: KAE8676815.1 (hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus])

HSP 1 Score: 80.5 bits (197), Expect = 3.9e-11
Identity = 67/241 (27.80%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 59   EDIADEVVREEQLKTLEVEKVP---EQSDQQAEDQQEVQER------FVKLRLLPTTHDS 118
            ED AD    +E L+ L  E +     Q+ + + +++ +Q R      F+K +L+PT+H++
Sbjct: 963  EDEADSHTYDEILEDLCFENIEWNGRQTSRYSVNRENLQLRAKLWNHFLKHKLMPTSHNT 1022

Query: 119  YVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFFLNTITMLCQRAGVSTSAE 178
             VS  R+LL+ +I+ S  IDV +II  ++  C  KK   L F N IT LC++  V  +A 
Sbjct: 1023 TVSLSRLLLLHSIMVSHPIDVGRIIVQQVHDCLSKKASALVFPNLITTLCRKKKVEENAF 1082

Query: 179  DVILMDKGIMDTPNLARLQSMQEARQGGLV----CGIDNIHEQLQLQASRMEIVERQAQ- 238
            D IL     +    L  L  ++  +    +     G    + + +L A    +++ Q   
Sbjct: 1083 DEILPGLSSITRARLPLLLGIENPKYKDPIHEQSAGTTQSNAEARLLALEEAVIQTQTHL 1142

Query: 239  --------TYWNYVKRRDATIRKALQSNFSKSYPTFPVFPDDLLNPWIPPLPIEREQEEE 278
                     ++ YVK RDA +    Q         FP F D++L+ +     +E +Q+EE
Sbjct: 1143 HALHGNIYNFFGYVKHRDAVVESMFQEIIPHGQRNFPGFLDEILSAFNAEASLEPKQDEE 1202

[Close]

BLAST of Spg018609.1 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])

HSP 1 Score: 77.4 bits (189), Expect = 3.3e-10
Identity = 47/150 (31.33%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 97   FVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFFLNTIT 156
            F++  LLPT+HDS VSR+R+ +++ I++   I+V K+I+ EIF C  +  GKLFF   IT
Sbjct: 880  FMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLIT 939

Query: 157  MLCQRAGVSTSAEDVILMDKGIMD-TPNLARLQSMQEARQGGLVCGIDNIHEQLQLQASR 216
              C+ A V    ++  +  KG++   P+ A  ++             D + E+L    + 
Sbjct: 940  EKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTAS--TSRDPMDERLSKHEAL 999

Query: 217  MEIVERQAQTYWNYVKRRDATIRKALQSNF 246
             + +  + QT+WNY + RD  + + L+ N+
Sbjct: 1000 QQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

[Close]

BLAST of Spg018609.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-19
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL+ ++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 105 KVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFF 164

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL---------QSMQEARQGGLVCGI 211
            + IT LC+ A    + E   L + G +D   +AR+         Q    +R        
Sbjct: 165 PSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSR 224

Query: 212 DNIHEQLQLQA-----SRMEIVERQAQTYWNYVKRRDATIRKALQSNFSKSYPTFPVFPD 261
            N     QL+A     S+ E   +Q Q +W Y K RD  ++KALQ+NF++  PTFP FP 
Sbjct: 225 TNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQ 284

[Close]

BLAST of Spg018609.1 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL++++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 46  KVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFF 105

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL--QSMQEARQ-------------- 211
            + IT LC+ A       +  L   G +D   +AR+  +   E  Q              
Sbjct: 106 PSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSR 165

Query: 212 --GGLVCGIDNIHEQLQLQ-------ASRMEIVERQAQTYWNYVKRRDATIRKALQSNFS 261
             G ++  +  + ++L  Q        S ++   +Q Q +W Y K RD  ++KALQ+NF+
Sbjct: 166 ANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFT 225

[Close]

BLAST of Spg018609.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 92  EVQERFVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFF 151
           +V   F+K RLLPTTH   VS+DR+LL+ ++L   +I+V ++I SEI  C  +K G LFF
Sbjct: 175 KVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFF 234

Query: 152 LNTITMLCQRAGVSTSAEDVILMDKGIMDTPNLARL------QSMQE------------A 211
            + IT LC+ A       +  L + G +D   +AR+      +S Q+             
Sbjct: 235 PSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNR 294

Query: 212 RQGGLVCGIDNIHEQLQLQ-------ASRMEIVERQAQTYWNYVKRRDATIRKALQSNFS 261
             G ++  +  + ++L  Q        S ++   +Q Q +W Y K RD  ++KALQ+NF+
Sbjct: 295 TNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFT 354

[Close]

BLAST of Spg018609.1 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-11
Identity = 67/241 (27.80%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 59   EDIADEVVREEQLKTLEVEKVP---EQSDQQAEDQQEVQER------FVKLRLLPTTHDS 118
            ED AD    +E L+ L  E +     Q+ + + +++ +Q R      F+K +L+PT+H++
Sbjct: 963  EDEADSHTYDEILEDLCFENIEWNGRQTSRYSVNRENLQLRAKLWNHFLKHKLMPTSHNT 1022

Query: 119  YVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFFLNTITMLCQRAGVSTSAE 178
             VS  R+LL+ +I+ S  IDV +II  ++  C  KK   L F N IT LC++  V  +A 
Sbjct: 1023 TVSLSRLLLLHSIMVSHPIDVGRIIVQQVHDCLSKKASALVFPNLITTLCRKKKVEENAF 1082

Query: 179  DVILMDKGIMDTPNLARLQSMQEARQGGLV----CGIDNIHEQLQLQASRMEIVERQAQ- 238
            D IL     +    L  L  ++  +    +     G    + + +L A    +++ Q   
Sbjct: 1083 DEILPGLSSITRARLPLLLGIENPKYKDPIHEQSAGTTQSNAEARLLALEEAVIQTQTHL 1142

Query: 239  --------TYWNYVKRRDATIRKALQSNFSKSYPTFPVFPDDLLNPWIPPLPIEREQEEE 278
                     ++ YVK RDA +    Q         FP F D++L+ +     +E +Q+EE
Sbjct: 1143 HALHGNIYNFFGYVKHRDAVVESMFQEIIPHGQRNFPGFLDEILSAFNAEASLEPKQDEE 1202

[Close]

BLAST of Spg018609.1 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-10
Identity = 47/150 (31.33%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 97   FVKLRLLPTTHDSYVSRDRVLLVFAILRSFNIDVDKIISSEIFGCWRKKVGKLFFLNTIT 156
            F++  LLPT+HDS VSR+R+ +++ I++   I+V K+I+ EIF C  +  GKLFF   IT
Sbjct: 880  FMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLIT 939

Query: 157  MLCQRAGVSTSAEDVILMDKGIMD-TPNLARLQSMQEARQGGLVCGIDNIHEQLQLQASR 216
              C+ A V    ++  +  KG++   P+ A  ++             D + E+L    + 
Sbjct: 940  EKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTAS--TSRDPMDERLSKHEAL 999

Query: 217  MEIVERQAQTYWNYVKRRDATIRKALQSNF 246
             + +  + QT+WNY + RD  + + L+ N+
Sbjct: 1000 QQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

The following BLAST results are available for this feature:

BLAST of Spg018609.1 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	3.0e-19	37.16	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON59596.1	3.3e-18	34.02	hypothetical protein PanWU01x14_158080 [Parasponia andersonii]	[more]
PON46472.1	5.6e-18	33.51	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
KAE8676815.1	3.9e-11	27.80	hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]	[more]
KAF4375842.1	3.3e-10	31.33	hypothetical protein G4B88_026421 [Cannabis sativa]	[more]

BLAST of Spg018609.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg018609.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	1.4e-19	37.16	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5CEY2	1.6e-18	34.02	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE...	[more]
A0A2P5BCG4	2.7e-18	33.51	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A6A2Y697	1.9e-11	27.80	Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 G...	[more]
A0A7J6FZ22	1.6e-10	31.33	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1	[more]

BLAST of Spg018609.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg018609	Spg018609	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4702862..4703147	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4704847..4705395	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4705739..4705769	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4706170..4706176	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4706513..4706603	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4707210..4707219	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4707306..4707377	CDS
Spg018609.1-cds	Spg018609.1-cds-scaffold3:4708068..4708305	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg018609.1	Spg018609.1-protein	polypeptide