Spg015871.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg015871.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 44803993 .. 44805957 (-)
Sequence length1056
RNA-Seq ExpressionSpg015871.1
SyntenySpg015871.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAGATTGAAGACTTCACGATTGTGTCAAGAGTGCCAGTTTCGGCAGGGCAGTTGTGTTGTCAGTATCAGAGACAGAAAGGGTATTGAAGCCGGACTCTTTGAGAGAGTCCAACCCGTCAGAGTGCAAGAACCAAGTCCATTTGCCAAGGGCTTGGGTATCAGTTGAGCAAGTTAAATCAGAAGGTGTACCAGGTAGGGTGCCTTCGAAAGAGCCATTATCACCAGAGGGATAGTGTTAATGGTTGCAAGCAGAGAAAGCCGGGGGTCGTTGTGACATCGCCGGTCAAGTGCCAGAATTGAGCATCAAGAAAGCCTATATGGGTGGGCGATCTGGGCTGCGTAGAGCCAGTGATTGGGAAAGAGCCCGAGAGAATGGGTTGCTTGTCCCGTGAAGACGCTCGTGTGTCGAGCGAGTGTGTCCCTTAAGTCACTTCACATGCCTAAGTGGGTGGCTTCACAGTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAAAGAAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGCCAAAGGGGAGTGCCAACAGAGAGAATGGGCTGTGTCATGCTTTCAGATGTCCGCACCATAAGGGATGGTGTCACGATGACAGAATTCCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTTTTATGTGCCGCTCAGAGAATATGTGTGTAAGTGGCCATGAGTGCCAAGAGAAATCGGGGCGCGCTCCCCGTAAGCGGAGGCGAAGAGAATGCCAAAGCTTAGCCGTGTTCTGTTAGAAGATCCTCGGGCCGAGTCCTAAAGTTGGGCGAACAGTGTAGGTCCACGAAGAAGGGGGTAGTCTGCAGGCATTGTGCTTTTTGCCGTGTCTACGTTGCGAGTCTTGGGGCCGAGTCCTAAAGTTGGGCGAACATTATAGGTCCAAGAGTGGGATAGCTCGTAGATAGTGTGCAGTTATGTTTGCCTTGCCTATGTTGCGAGTCTCGGGGCCAAGTCCTAAAATTGGGCGAACAGTGTAGGTCCGTGGGTGGGATAGCTCATAGGTAGTGCGCAATTTCCATATTCGTTCTGATGCACAATATTTCAGCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAAGTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAGTAGGTTGTGACCCTCACTGAGCAGACAGTGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCGTGTTGAGAAGCAACAGTGTCGTCAGACGCGTCAGTGGTATGCTTAATGGGGGTCAGATGGGGCCCCGGGCCATGACCTCGGAAGTCGGGGTTCCGTCGTGAGTTTTGACGAGCGGCTCTGGAGTTAAGTGCATATGAGTGAAGTATGCAAGCCCGCAAAGTTTCGTGTCAATCGGACACCAGACGGGCGCTCCACGTTGGCGTATGACTCCTCGTGAATATGACGTGCAAGGGTGTCAGACCAAATATGCCTCAGAATGTACTATAGGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

mRNA sequence

ATGGTCAGATTGAAGACTTCACGATTGTGTCAAGAGTGCCAGTTTCGGCAGGGCAGTTGTGTTGTCAGTATCAGAGACAGAAAGGGTATTGAAGCCGGACTCTTTGAGAGAGTCCAACCCGTCAGAGTGCAAGAACCAAGTCCATTTGCCAAGGGCTTGGAGAAAGCCGGGGGTCGTTGTGACATCGCCGGTCAAGTGCCAGAATTGAGCATCAAGAAAGCCTATATGGGTGGGCGATCTGGGCTGCGTAGAGCCAGTGATTGGGAAAGAGCCCGAGAGAATGGTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAAAGAAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGCCAAAGGGGAGTGCCAACAGAGAGAATGGGCTGTGTCATGCTTTCAGATGTCCGCACCATAAGGGATGGTGTCACGATGACAGAATTCCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTTTTATGTGCCGCTCAGAGAATATGTGTCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAATGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCGTGTTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Coding sequence (CDS)

ATGGTCAGATTGAAGACTTCACGATTGTGTCAAGAGTGCCAGTTTCGGCAGGGCAGTTGTGTTGTCAGTATCAGAGACAGAAAGGGTATTGAAGCCGGACTCTTTGAGAGAGTCCAACCCGTCAGAGTGCAAGAACCAAGTCCATTTGCCAAGGGCTTGGAGAAAGCCGGGGGTCGTTGTGACATCGCCGGTCAAGTGCCAGAATTGAGCATCAAGAAAGCCTATATGGGTGGGCGATCTGGGCTGCGTAGAGCCAGTGATTGGGAAAGAGCCCGAGAGAATGGTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAAAGAAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGCCAAAGGGGAGTGCCAACAGAGAGAATGGGCTGTGTCATGCTTTCAGATGTCCGCACCATAAGGGATGGTGTCACGATGACAGAATTCCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTTTTATGTGCCGCTCAGAGAATATGTGTCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAATGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCGTGTTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Protein sequence

MVRLKTSRLCQECQFRQGSCVVSIRDRKGIEAGLFERVQPVRVQEPSPFAKGLEKAGGRCDIAGQVPELSIKKAYMGGRSGLRRASDWERARENGCQDQQFARDGAPGWRQSRKKKKLLQVPTEASVQRLPHEGGQLLVGQRGVPTERMGCVMLSDVRTIRDGVTMTEFRGRLASLTPRGAPFYVPLREYVSGPSAASPKSDRHRDDAEIKWGRMSQSIVQVMWIVPPMKWWHVECRPSGHVRGPRERSAMMRSRRTMHHPTHQDEWTLMSQEGMSVLRSNSVVRRGEAWCQLSTTPGPCGLSELPHGTCVCHGVGERCKTSVLGVFLWEWVSKDSVGRHGCADIAPPPMG
Homology
The following BLAST results are available for this feature:
BLAST of Spg015871.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg015871.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg015871.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg015871.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg015871Spg015871gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44803993..44804190CDS
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44804429..44804601CDS
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44804694..44804804CDS
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44805203..44805492CDS
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44805577..44805700CDS
Spg015871.1-cdsSpg015871.1-cds-scaffold6:44805798..44805957CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg015871.1Spg015871.1-proteinpolypeptide