Spg010475.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg010475.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MuDRA-like transposase
Location	scaffold5: 11571337 .. 11573887 (+)
Sequence length	960
RNA-Seq Expression	Spg010475.1
Synteny	Spg010475.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTCCGAAGGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTTCCACTAGACTTAGCCAATGATAATGCACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGATGATACACTTAATTACGAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGTTATGATGATGACGTTGCAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGGAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGGTGCTTCTAGCCAGCAATTGATCACATTAGGTCAGTGTTCATATTCTACTGGTGATGTTGAACTTGGACAACTATATGATTGTAAAGAAGAATTGAAAACGAGATTGTCTGTAATGGCCATGAAGAAAAATTTTGAGTTTAGGGTTAAGAAATCCACGAAGTCTTTGTTTGTGGTGAAATGTATAATCGAATCTTGCAAATGGAAAGTTAGAGCTATAAAACCGAAGGGTTATGACGTATTCAAGATTTCAAAATATTATAATGTCCATACATGCTCCCATGAATTACTAAATCACCACCATAGACAAGCGAAGAGTCGGGTGGTAGGGCATTTGATTAAGTCGAAATTTGAGGATGTAAGACGAATTTACAAGCCGAATGACATTATACAGGACATGCGAAAAGACTACGGGGTCACTATTAGTTATGAGAAAGCATGGCGGGCTAGAGAGGAGGCACTAGCTTTTGTTAGAGGATCACTAGAAGAGTCATTTGGTCACTTACATGCATATGGTGAAGCGCTGAAGATCATGAACCCTGGGACCGTATATGATATAAAGCTCGAGGATGGAAAGTATTTTAAATATGTGTTCATGGCACTAAGTCAGTGCATTAGGGGGTTTATTCAATACATTAGGCCAGTCATTATAGTTGATGGCGCGCACCTAAAGGGGAAGTTCGGAGGTTGGCTTCTAATTGCGGTTGGAGTGGATGGAAACAATCAAATATACCCCATTGCATTTGGAGTTGTTGATGGTGAGACAGATGATGCGTGGCAGTGGTTCTTTGAGAGAGTTAAACGTTCTATTGGAGATCCCACTGGATTGGTTATAGTATCAGATCGAAAGTCCAGTATTGGCAAGGCAATTAGAACAATGTGTCCATCTGCATTTCATTGTTTTTGCATACACCATTTATCTATGAACCTCACGAAGAATTTTAAGTGCGAAGGTGCAATACCTTTCTTTTTTCTTGCTGCAAAAGCATGTCGAGAGTCGGAGTTTCAAAACATGTTTGCTAAACTTCGTCCATTCAGTGGTGTTGCTAAGTACTTGGAAGAATTGGGTTTCCCACGGGGCTTTTCAATGTGGACGAAGATACAATCAGATGACAACTAATGTGGCCGAAAGTATGAATGCAACATTGGTACATGCTCGAACCTTGCCGGTGACGAAGATGTTGGACAATATACGAGGCATGCTTCAAAGTTGGTTTTATAAGCGTCGGACACATGCCTCTAACCAATCTTCGAGGTTATCAGAGTACGCAGAGAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGACCCGATTGATTGCTACCAATATCAAGTATACGAAGGACAAGTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCAAGAGTTTGAGTACTACAAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAATCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

mRNA sequence

ATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTCCGAAGGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTTCCACTAGACTTAGCCAATGATAATGCACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGATGATACACTTAATTACGAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGTTATGATGATGACGTTGCAGTAGATGGAGTTGAGGCAGATGAATCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Coding sequence (CDS)

ATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTCCGAAGGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTTCCACTAGACTTAGCCAATGATAATGCACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGATGATACACTTAATTACGAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGTTATGATGATGACGTTGCAGTAGATGGAGTTGAGGCAGATGAATCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Protein sequence

MPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPKDVHGSGSNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLANDNAPNFGIEENLYTGDDTLNYEEYDEEEDENWEYNEEDEELDESYEEESEADEFEEVDGYDDDVAVDGVEADESIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

Homology

[Close]

BLAST of Spg010475.1 vs. NCBI nr
Match: XP_022156834.1 (uncharacterized protein LOC111023667 [Momordica charantia])

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-24
Identity = 94/248 (37.90%), Postives = 134/248 (54.03%), Query Frame = 0


Query: 1   MPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCL 60
           M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDLI++C+
Sbjct: 21  MRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPDQFDLIVQCV 80

Query: 61  YNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGSNLGSHSHIPHT 120
           Y F  R  VP YLI +D  L+F+L+G  D S++PLY+++IPK  +GSGS  G++     T
Sbjct: 81  YRFDFRYEVPNYLIFDDSSLKFYLNGPPDPSQVPLYVTVIPKASYGSGSRRGNNFFETQT 140

Query: 121 LSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDL 180
            S  FP  P    P F +T+  +       +PS IP   P  DNV          +P +L
Sbjct: 141 -SSSFPYYPRQNDPCFGRTISIDSPLDDVGLPSFIPQITPLADNV----------IPCNL 200

Query: 181 ANDNAPNFG-IEEN----LYTGDDTLNYEEYDEEE------DENWEYNEEDE-----ELD 223
            +D +P +G + EN     +  DD  +Y+EY  E+         ++  EEDE      LD
Sbjct: 201 DDDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVEGDGGNGYDNGEEDEYHTEDVLD 257

[Close]

BLAST of Spg010475.1 vs. NCBI nr
Match: KAA0050460.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-18
Identity = 108/371 (29.11%), Postives = 160/371 (43.13%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y 
Sbjct: 5   RILVRYGSAWDEGRRKYEGEVLKGIVVSKEITHKDLHDELYDLAEVDPTKFDIKIRCIYE 64

Query: 63  F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIP----------KDVHGSG----- 122
                  P + + ND +L+F++  E+  ++PLYLS  P          KD +        
Sbjct: 65  IKREKEAPPFELSNDCDLKFYILSENPLEVPLYLSFEPTNNQSKKLLNKDYNSVSRSNQV 124

Query: 123 SNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTF 182
            NL SH  I                     N   +IP    +  PT D       +  +F
Sbjct: 125 QNLNSHPSIGMDTLHGNEVDISELQSVEMNNELFDIPQQRDA--PTKD-CKGKGKVDYSF 184

Query: 183 VPLDLANDNAPNF----GIEENLYTGDDTLNYEEYDEEEDENWEYNE------------- 242
               + +  A  F     I+E L+    T +     E + ++W   E             
Sbjct: 185 SKEVVGSKKALKFVVKKFIKEVLFVNTSTTSVVGDCERKAKSWVVGELIKSKFKGASRLY 244

Query: 243 ----------EDEELDESYEEESEADE--FEEVDGYDDDV--------AVDGVEADESIY 302
                     +D +++ SYE+   A E  +E V G  ++                 E IY
Sbjct: 245 KPRDIIEDMRQDYDINMSYEKAWRARENAYERVLGSPEESYNLLRRYGEALKFTNPEVIY 304

Query: 303 PVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHN 320
            VG  S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHN
Sbjct: 305 LVGNQSDWKTSEDYIRMTVLPPKVVKRVGRSKKKRISSIGEAPKL---HKCSRCKQIGHN 364

[Close]

BLAST of Spg010475.1 vs. NCBI nr
Match: XP_022155431.1 (uncharacterized protein LOC111022579 isoform X1 [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-17
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RIFV YGGVW + + +Y+GG L G+ V  +I Y++ L ELY ++  +P + D+ I+C+Y 
Sbjct: 5   RIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYE 64

Query: 63  FGSR--VPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK-----DVHGSGSNLGSHSH 114
             +R   P + I NDR+L F+L GED S++PLY+S  P+     +V     N    SH
Sbjct: 65  IKARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPRSRDLTEVESQSQNNSMMSH 122

[Close]

BLAST of Spg010475.1 vs. NCBI nr
Match: XP_022155431.1 (uncharacterized protein LOC111022579 isoform X1 [Momordica charantia])

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-14
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 245 ESIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 304
           ++I+ VGP SEWK P+++ EM +LPPK VA+VGRR++ +I S GE  +  ++HKCGRC  
Sbjct: 680 DAIFSVGPTSEWKMPSDYVEMNVLPPKFVAKVGRRQSKKITSTGE-SETPKMHKCGRCDQ 739

Query: 305 IGHNRKTCREPLSTT 320
            GHNR TCR P++ T
Sbjct: 740 KGHNRATCRYPITYT 753

HSP 2 Score: 100.9 bits (250), Expect = 2.1e-17
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RIFV YGGVW + + +Y+GG L G+ V  +I Y++ L ELY ++  +P + D+ I+C+Y 
Sbjct: 5   RIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYE 64

Query: 63  FGSR--VPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK-----DVHGSGSNLGSHSH 114
             +R   P + I NDR+L F+L GED S++PLY+S  P+     +V     N    SH
Sbjct: 65  IKARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPRSRDLTEVESQSQNNSMMSH 122

[Close]

BLAST of Spg010475.1 vs. NCBI nr
Match: KAA0038984.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-17
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RI VC+GG W E +R YEGG L G+ V+ +I +++   ELY+++G++P +FD+ IRC+Y 
Sbjct: 5   RILVCHGGAWNEGQRKYEGGVLKGIVVSKEITHKDLQYELYDLAGVDPTKFDIKIRCIYE 64

Query: 63  F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK 100
                  P + + NDR+L+F++  E+  ++PLYLS  P+
Sbjct: 65  IKGEKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEPR 103

[Close]

BLAST of Spg010475.1 vs. ExPASy TrEMBL
Match: A0A6J1DUS4 (uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023667 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24
Identity = 94/248 (37.90%), Postives = 134/248 (54.03%), Query Frame = 0


Query: 1   MPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCL 60
           M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDLI++C+
Sbjct: 21  MRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPDQFDLIVQCV 80

Query: 61  YNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGSNLGSHSHIPHT 120
           Y F  R  VP YLI +D  L+F+L+G  D S++PLY+++IPK  +GSGS  G++     T
Sbjct: 81  YRFDFRYEVPNYLIFDDSSLKFYLNGPPDPSQVPLYVTVIPKASYGSGSRRGNNFFETQT 140

Query: 121 LSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDL 180
            S  FP  P    P F +T+  +       +PS IP   P  DNV          +P +L
Sbjct: 141 -SSSFPYYPRQNDPCFGRTISIDSPLDDVGLPSFIPQITPLADNV----------IPCNL 200

Query: 181 ANDNAPNFG-IEEN----LYTGDDTLNYEEYDEEE------DENWEYNEEDE-----ELD 223
            +D +P +G + EN     +  DD  +Y+EY  E+         ++  EEDE      LD
Sbjct: 201 DDDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVEGDGGNGYDNGEEDEYHTEDVLD 257

[Close]

BLAST of Spg010475.1 vs. ExPASy TrEMBL
Match: A0A5A7U5G9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00730 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18
Identity = 108/371 (29.11%), Postives = 160/371 (43.13%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y 
Sbjct: 5   RILVRYGSAWDEGRRKYEGEVLKGIVVSKEITHKDLHDELYDLAEVDPTKFDIKIRCIYE 64

Query: 63  F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIP----------KDVHGSG----- 122
                  P + + ND +L+F++  E+  ++PLYLS  P          KD +        
Sbjct: 65  IKREKEAPPFELSNDCDLKFYILSENPLEVPLYLSFEPTNNQSKKLLNKDYNSVSRSNQV 124

Query: 123 SNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTF 182
            NL SH  I                     N   +IP    +  PT D       +  +F
Sbjct: 125 QNLNSHPSIGMDTLHGNEVDISELQSVEMNNELFDIPQQRDA--PTKD-CKGKGKVDYSF 184

Query: 183 VPLDLANDNAPNF----GIEENLYTGDDTLNYEEYDEEEDENWEYNE------------- 242
               + +  A  F     I+E L+    T +     E + ++W   E             
Sbjct: 185 SKEVVGSKKALKFVVKKFIKEVLFVNTSTTSVVGDCERKAKSWVVGELIKSKFKGASRLY 244

Query: 243 ----------EDEELDESYEEESEADE--FEEVDGYDDDV--------AVDGVEADESIY 302
                     +D +++ SYE+   A E  +E V G  ++                 E IY
Sbjct: 245 KPRDIIEDMRQDYDINMSYEKAWRARENAYERVLGSPEESYNLLRRYGEALKFTNPEVIY 304

Query: 303 PVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHN 320
            VG  S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHN
Sbjct: 305 LVGNQSDWKTSEDYIRMTVLPPKVVKRVGRSKKKRISSIGEAPKL---HKCSRCKQIGHN 364

[Close]

BLAST of Spg010475.1 vs. ExPASy TrEMBL
Match: A0A6J1DPC2 (uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-17
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RIFV YGGVW + + +Y+GG L G+ V  +I Y++ L ELY ++  +P + D+ I+C+Y 
Sbjct: 5   RIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYE 64

Query: 63  FGSR--VPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK-----DVHGSGSNLGSHSH 114
             +R   P + I NDR+L F+L GED S++PLY+S  P+     +V     N    SH
Sbjct: 65  IKARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPRSRDLTEVESQSQNNSMMSH 122

[Close]

BLAST of Spg010475.1 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-17
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RIFV YGGVW + + +Y+GG L G+ V  +I Y++ L ELY ++  +P + D+ I+C+Y 
Sbjct: 5   RIFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYE 64

Query: 63  FGSR--VPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK-----DVHGSGSNLGSHSH 114
             +R   P + I NDR+L F+L GED S++PLY+S  P+     +V     N    SH
Sbjct: 65  IKARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPRSRDLTEVESQSQNNSMMSH 122

[Close]

BLAST of Spg010475.1 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-14
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 245 ESIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 304
           ++I+ VGP SEWK P+++ EM +LPPK VA+VGRR++ +I S GE  +  ++HKCGRC  
Sbjct: 680 DAIFSVGPTSEWKMPSDYVEMNVLPPKFVAKVGRRQSKKITSTGE-SETPKMHKCGRCDQ 739

Query: 305 IGHNRKTCREPLSTT 320
            GHNR TCR P++ T
Sbjct: 740 KGHNRATCRYPITYT 753

HSP 2 Score: 99.8 bits (247), Expect = 2.2e-17
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 3   RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 62
           RI VC+GG W E +R YEGG L G+ V+ +I +++   ELY+++G++P +FD+ IRC+Y 
Sbjct: 5   RILVCHGGAWNEGQRKYEGGVLKGIVVSKEITHKDLQYELYDLAGVDPTKFDIKIRCIYE 64

Query: 63  F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPK 100
                  P + + NDR+L+F++  E+  ++PLYLS  P+
Sbjct: 65  IKGEKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEPR 103

The following BLAST results are available for this feature:

BLAST of Spg010475.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156834.1	3.9e-24	37.90	uncharacterized protein LOC111023667 [Momordica charantia]	[more]
KAA0050460.1	2.5e-18	29.11	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
XP_022155431.1	2.1e-17	40.68	uncharacterized protein LOC111022579 isoform X1 [Momordica charantia]	[more]
XP_022155431.1	4.8e-14	53.33	uncharacterized protein LOC111022579 isoform X1 [Momordica charantia]	[more]
KAA0038984.1	4.6e-17	41.41	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]

BLAST of Spg010475.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010475.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUS4	1.9e-24	37.90	uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5A7U5G9	1.2e-18	29.11	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A6J1DPC2	1.0e-17	40.68	uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRN0	1.0e-17	40.68	uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRN0	2.3e-14	53.33	uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg010475.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 196..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..130
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 298..314 score: 8.614303

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg010475	Spg010475	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg010475.1-cds	Spg010475.1-cds-scaffold5:11571337..11572069	CDS
Spg010475.1-cds	Spg010475.1-cds-scaffold5:11573661..11573887	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg010475.1	Spg010475.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding