Spg010102.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg010102.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOB domain-containing protein
Location	scaffold7: 7965904 .. 7967972 (+)
Sequence length	621
RNA-Seq Expression	Spg010102.1
Synteny	Spg010102.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAAAGTCATCCTCCTCCCCACTAAATTCCTCTGTGTATTTATATGAGCTTCTCAGCCTCTTCCATTTCCCAACACAAACTCACACAAGAATTTTCCTCCATTTTCCTTCTCCTTTTCCCACTCTCCAAACACAAATTTCTCTCTCCTCTCTCCAATTTTCTCTCTCTAGAAAACACACAAAAACTAAAAAAAAAATGGCTTACGTGGCCAAATGTACGAACTCTTCACCGACGCCGATCACTCTTCCAAACCCCTTATCTTACTCTCCCTCTTCTTCCTCCGCCGCCGCCGCCGCCAATTTTGCTTCGCCGCCCACTTCTCAGCCGTCGTCGCCGCCGCCTGCGGTGGTGCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGCGTTTTGGCTCCTTATTTCCCGCCGACGGAGCCCCTCAAGTTCACCATTGCTCATAGAGTATTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGTACGCCAAAAAAAATTGAATTTTTTTGACTTTTGTGATGAAAAAAATTTGTTTTTCTTTTTACTAAAATGGTTTGATAATTCAAAGATTTTTTGGGGTTTTCTTAGTTCAACACCTAATGTCATTCATATCTAATCATTTGTTCGAGAGTAGATGTCAATTACTGAGAGTCCATGTCGGATTTAATTACTACATTTTGGGTAAATTAATTCACACCCACATTTTGAAATGATTCAATTTGTCTTCCCAAATTGGAATTTTGGAATTTTGACTTCCCAAAATTTTGTTTTTGTGATGAGGGTTATTTGTCTCTCTTTTTTTTTTTTTTTTTGTTTAGGGTTTAAGGTTTGGAAATTACCATTAGTAATTCTATGTATTTTAGAAAGAATATAGTAACTTCTTTGGTATTTTTTAAATGTAAATAATTGAAATAAGAGGGTATGGTTTGATTTAACTCAAAAAAGAAATGAATTGATGATTTGAAGTAACTAATTAAGTTTTGATTTTTGATGGGACTTAACCCGTAATTGATGGAACTTCGGTTTGTTTAATTTTCCTTTAGGTTAAATTAGTTGGTCAATAAAGTTTTGATAGGGATAGAGAGTTCAAAATTTGGTCTCATTTATTTTGAGAATAAATCATTCCTTTTTACTCTCGGTTAATTCGAGAACTATCGAATGTAAAAACTCAAAAATTTACTATAAATCATCATAATTAATGTTATTTTAAAATTTGTAGGAACTTCCTGAATCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAACGCACGTTTGCGAGATCCAGTGTATGGTAGCGCAGGCGCGATATGCCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCAAGAGCGGAGGTAGCCAATATGCAACAACAACAAGCCAACTTATTGGCCTTGATTTGCATGGAAATGAGGCAATCACCGGAGCCCGTTTGGCCACCGCAACTCGTCGACACTACTTGCTTTCTCGACGACGCCACGCTTAGCTCGCCGTGGGAGCCGCTCTGGACGTGATCTTGCCGCCGGACTGGCATTCTTTTGCAATGATATTTAATTTGGGTTAGAGAAAGAATTAAGTTAATTGTTATACTAAAATATACTCTAAATATATATATAAATGGTAATGTTGATTATGATAATAATGTTAATGATTTTAACTGAAATATGGAAGGGGATCCAAGATTTTTCCCCATATATAATTGTAATATTCTGAGTTTCAATGGAGAGAGGAAAGAGAGAAATTATGAAAGGGTTTTGGACTTTTGGAGGATGGTGGTTGTTTTTATTTAGAAGATTTGTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTAATGAAAGATCCTTTTGGGTAACCTAATTTTTGCCTTCTAAATTGGAATTATATGGGGAATTTTCCTTTTTCTTCAATGTCTCTATCTCTCCCCTTCCATGCATTTCTATACAATTTTCTCATTATGAGATCTCTTTCCTTTCTTGCTCCCTTTATCCAATGCAAAGAAAAATAATACATTCAATAAGATCATAATGAG

mRNA sequence

ATGGCTTACGTGGCCAAATGTACGAACTCTTCACCGACGCCGATCACTCTTCCAAACCCCTTATCTTACTCTCCCTCTTCTTCCTCCGCCGCCGCCGCCGCCAATTTTGCTTCGCCGCCCACTTCTCAGCCGTCGTCGCCGCCGCCTGCGGTGGTGCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGCGTTTTGGCTCCTTATTTCCCGCCGACGGAGCCCCTCAAGTTCACCATTGCTCATAGAGTATTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAACTTCCTGAATCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAACGCACGTTTGCGAGATCCAGTGTATGGTAGCGCAGGCGCGATATGCCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCAAGAGCGGAGGTAGCCAATATGCAACAACAACAAGCCAACTTATTGGCCTTGATTTGCATGGAAATGAGGCAATCACCGGAGCCCGTTTGGCCACCGCAACTCGTCGACACTACTTGCTTTCTCGACGACGCCACGCTTAGCTCGCCGTGGGAGCCGCTCTGGACGTGA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTACGAACTCTTCACCGACGCCGATCACTCTTCCAAACCCCTTATCTTACTCTCCCTCTTCTTCCTCCGCCGCCGCCGCCGCCAATTTTGCTTCGCCGCCCACTTCTCAGCCGTCGTCGCCGCCGCCTGCGGTGGTGCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGCGTTTTGGCTCCTTATTTCCCGCCGACGGAGCCCCTCAAGTTCACCATTGCTCATAGAGTATTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAACTTCCTGAATCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAACGCACGTTTGCGAGATCCAGTGTATGGTAGCGCAGGCGCGATATGCCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCAAGAGCGGAGGTAGCCAATATGCAACAACAACAAGCCAACTTATTGGCCTTGATTTGCATGGAAATGAGGCAATCACCGGAGCCCGTTTGGCCACCGCAACTCGTCGACACTACTTGCTTTCTCGACGACGCCACGCTTAGCTCGCCGTGGGAGCCGCTCTGGACGTGA

Protein sequence

MAYVAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT

Homology

[Close]

BLAST of Spg010102.1 vs. NCBI nr
Match: XP_038892948.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 6.3e-100
Identity = 197/209 (94.26%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPNPLSYSPSSSSAAAA--ANFASPPTSQPSSPP-PAVVLSPCA 60
           MAYVAKCTNS PTPI +PN LS+SP SSS+AAA   NFASPPTSQPSSPP  AVVLSPCA
Sbjct: 1   MAYVAKCTNSPPTPINVPNHLSFSPMSSSSAAATTTNFASPPTSQPSSPPLSAVVLSPCA 60

Query: 61  ACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVY 120
           ACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVY
Sbjct: 61  ACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVY 120

Query: 121 EANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSP 180
           EANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSP
Sbjct: 121 EANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSP 180

Query: 181 EPVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           EPVWPPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 EPVWPPQLVDTTCFLDDATLSSPWEPLWT 209

[Close]

BLAST of Spg010102.1 vs. NCBI nr
Match: XP_023532963.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031857.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 189/208 (90.87%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPN-PLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLSPCAA 60
           MAY+AKCTN+  TPIT+PN PLSYSP SSS+AA  NF SPPTSQPSS PPP V+LSPCAA
Sbjct: 1   MAYLAKCTNAPSTPITVPNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSPCAA 60

Query: 61  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 120
           CKILRRRCVEKCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYE
Sbjct: 61  CKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYE 120

Query: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 180
           ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQSP+
Sbjct: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPD 180

Query: 181 PVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           PVWPPQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 PVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of Spg010102.1 vs. NCBI nr
Match: XP_022957188.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 188/208 (90.38%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPN-PLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLSPCAA 60
           M Y+AKCTN+  TPIT+PN PLSYSP SSS+AA  NF SPPTSQPSS PPP V+LSPCAA
Sbjct: 1   MXYLAKCTNAPSTPITVPNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSPCAA 60

Query: 61  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 120
           CKILRRRCVEKCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYE
Sbjct: 61  CKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYE 120

Query: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 180
           ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQSP+
Sbjct: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPD 180

Query: 181 PVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           PVWPPQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 PVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of Spg010102.1 vs. NCBI nr
Match: XP_022999523.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 187/208 (89.90%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPN-PLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLSPCAA 60
           MAY+AKCTN+  TPIT+ N PLSYSP SSS+AA  NF SPPTSQPSS PPPAV+LSPCAA
Sbjct: 1   MAYLAKCTNAPSTPITVSNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPAVILSPCAA 60

Query: 61  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 120
           CKILRRRCVEKCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYE
Sbjct: 61  CKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYE 120

Query: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 180
           A+ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQSP+
Sbjct: 121 AHARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPD 180

Query: 181 PVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           PVWPPQL DTTCFLDDA LSSPWEPLWT
Sbjct: 181 PVWPPQLPDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of Spg010102.1 vs. NCBI nr
Match: XP_004143693.1 (LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical protein Csa_000465 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 3.7e-92
Identity = 188/212 (88.68%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 1   MAYVAKCTNSS-PTPITL----PNPLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLS 60
           MAYVAKCTN+S PTPI++     NPLS+SP SS         SPPTSQPSS PPPAVVLS
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR
Sbjct: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180

Query: 181 QSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           QSPEPVW PQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-52
Identity = 118/185 (63.78%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 27  SSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTI 86
           S ++ A     S  +S P S  P VVLSPCAACKILRRRC E+CVLAPYFPPT+P KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWPPQLVDTTCFLDDATLSSP----W 206
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 7.3e-51
Identity = 112/166 (67.47%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 4   VAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILR 63
           VAK T ++ TP+  P+P S  P             PP S    P P VVLSPCAACKILR
Sbjct: 18  VAKVTETT-TPVNSPSPTSSPP-------------PPPSPQQPPQPPVVLSPCAACKILR 77

Query: 64  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 123
           RRC +KCVLAPYFPPT+P KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+
Sbjct: 78  RRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARM 137

Query: 124 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 170
           RDPVYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI
Sbjct: 138 RDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35
Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 162
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 164
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 6.9e-33
Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 43  QPSSPPPAVV--LSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFL 102
           +P S PP  +  ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L
Sbjct: 31  RPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKML 90

Query: 103 QELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQ 162
            E+PESQR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q
Sbjct: 91  MEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQ 150

Query: 163 QQA 164
           ++A
Sbjct: 151 REA 153

[Close]

BLAST of Spg010102.1 vs. ExPASy TrEMBL
Match: A0A6J1GZI6 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458656 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.4e-97
Identity = 188/208 (90.38%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPN-PLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLSPCAA 60
           M Y+AKCTN+  TPIT+PN PLSYSP SSS+AA  NF SPPTSQPSS PPP V+LSPCAA
Sbjct: 1   MXYLAKCTNAPSTPITVPNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSPCAA 60

Query: 61  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 120
           CKILRRRCVEKCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYE
Sbjct: 61  CKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYE 120

Query: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 180
           ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQSP+
Sbjct: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPD 180

Query: 181 PVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           PVWPPQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 PVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of Spg010102.1 vs. ExPASy TrEMBL
Match: A0A6J1KJX7 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.8e-96
Identity = 187/208 (89.90%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPN-PLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLSPCAA 60
           MAY+AKCTN+  TPIT+ N PLSYSP SSS+AA  NF SPPTSQPSS PPPAV+LSPCAA
Sbjct: 1   MAYLAKCTNAPSTPITVSNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPAVILSPCAA 60

Query: 61  CKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYE 120
           CKILRRRCVEKCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYE
Sbjct: 61  CKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYE 120

Query: 121 ANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPE 180
           A+ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQSP+
Sbjct: 121 AHARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPD 180

Query: 181 PVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           PVWPPQL DTTCFLDDA LSSPWEPLWT
Sbjct: 181 PVWPPQLPDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of Spg010102.1 vs. ExPASy TrEMBL
Match: A0A1S3BDP1 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.9e-92
Identity = 187/212 (88.21%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MAYVAKCTNSS-PTPITL----PNPLSYSPSSSSAAAAANFASPPTSQPSS-PPPAVVLS 60
           MAYVAKCTN+S PTPI+      NPLS+SP SS         SPPTSQPSS PPP VVLS
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPPVVLS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR
Sbjct: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180

Query: 181 QSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT 207
           QSPEPVW PQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of Spg010102.1 vs. ExPASy TrEMBL
Match: A0A6J1FVK4 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447681 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 179/206 (86.89%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACK 60
           MAYVAKCT+S PTP TLPNP     SSS+AAA  NF SPPTSQ SS P AVVLSPCAACK
Sbjct: 1   MAYVAKCTSSPPTPTTLPNP---PLSSSAAAATTNFVSPPTSQQSSTPVAVVLSPCAACK 60

Query: 61  ILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEAN 120
           ILRRRC+EKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYEAN
Sbjct: 61  ILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEAN 120

Query: 121 ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPV 180
           AR+RDPVYGSAGAICQLQ QVSELQAQLAKARAEVANMQQQQANLLALICMEM+QS EP+
Sbjct: 121 ARVRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPL 180

Query: 181 WPPQLVDTTCFLDDATLSSPWEPLWT 207
           W   L DTTCFLDDATLS+PWEPLWT
Sbjct: 181 WASHLADTTCFLDDATLSAPWEPLWT 203

[Close]

BLAST of Spg010102.1 vs. ExPASy TrEMBL
Match: A0A6J1JDC2 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485758 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.4e-90
Identity = 176/206 (85.44%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MAYVAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACK 60
           MAYVAKCT+S PTP TLPNPL       S++AA NF SPPTSQ  S P AVVLSPCAACK
Sbjct: 1   MAYVAKCTSSPPTPTTLPNPL-------SSSAATNFVSPPTSQQLSTPVAVVLSPCAACK 60

Query: 61  ILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEAN 120
           ILRRRC+EKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYEAN
Sbjct: 61  ILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEAN 120

Query: 121 ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPV 180
           AR+RDPVYGSAGAICQLQ QVSELQAQLAKARAEVANMQQQQANLLALICMEM+QS EP+
Sbjct: 121 ARVRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPI 180

Query: 181 WPPQLVDTTCFLDDATLSSPWEPLWT 207
           W   L DTTCFLDDATLS+PWEPLWT
Sbjct: 181 WASHLADTTCFLDDATLSAPWEPLWT 199

[Close]

BLAST of Spg010102.1 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 207.6 bits (527), Expect = 9.5e-54
Identity = 118/185 (63.78%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 27  SSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTI 86
           S ++ A     S  +S P S  P VVLSPCAACKILRRRC E+CVLAPYFPPT+P KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWPPQLVDTTCFLDDATLSSP----W 206
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of Spg010102.1 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-52
Identity = 112/166 (67.47%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 4   VAKCTNSSPTPITLPNPLSYSPSSSSAAAAANFASPPTSQPSSPPPAVVLSPCAACKILR 63
           VAK T ++ TP+  P+P S  P             PP S    P P VVLSPCAACKILR
Sbjct: 18  VAKVTETT-TPVNSPSPTSSPP-------------PPPSPQQPPQPPVVLSPCAACKILR 77

Query: 64  RRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARL 123
           RRC +KCVLAPYFPPT+P KFTIAHRVFGASNIIKFLQELPESQRTDAV+SMVYEA AR+
Sbjct: 78  RRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARM 137

Query: 124 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALI 170
           RDPVYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI
Sbjct: 138 RDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of Spg010102.1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 148.3 bits (373), Expect = 6.8e-36
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 164
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Spg010102.1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.8e-36
Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 54  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 113
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 114 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 162
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Spg010102.1 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 142.1 bits (357), Expect = 4.9e-34
Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 43  QPSSPPPAVV--LSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFL 102
           +P S PP  +  ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L
Sbjct: 31  RPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKML 90

Query: 103 QELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQ 162
            E+PESQR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q
Sbjct: 91  MEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQ 150

Query: 163 QQA 164
           ++A
Sbjct: 151 REA 153

The following BLAST results are available for this feature:

BLAST of Spg010102.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892948.1	6.3e-100	94.26	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_023532963.1	2.9e-97	90.87	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 ...	[more]
XP_022957188.1	1.1e-96	90.38	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_022999523.1	1.6e-95	89.90	LOB domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_004143693.1	3.7e-92	88.68	LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical pro...	[more]

BLAST of Spg010102.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	1.3e-52	63.78	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	7.3e-51	67.47	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	9.6e-35	65.74	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	9.6e-35	67.27	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	6.9e-33	56.91	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of Spg010102.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZI6	5.4e-97	90.38	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1KJX7	7.8e-96	89.90	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855...	[more]
A0A1S3BDP1	8.9e-92	88.21	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=...	[more]
A0A6J1FVK4	1.7e-90	86.89	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1JDC2	6.4e-90	85.44	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485758...	[more]

BLAST of Spg010102.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	9.5e-54	63.78	LOB domain-containing protein 1	[more]
AT2G28500.1	5.2e-52	67.47	LOB domain-containing protein 11	[more]
AT1G31320.1	6.8e-36	67.27	LOB domain-containing protein 4	[more]
AT2G30130.1	6.8e-36	65.74	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	4.9e-34	56.91	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..168
None	No IPR available	PANTHER	PTHR31301:SF160	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 44..188
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 44..188
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 55..152 e-value: 1.7E-40 score: 137.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 54..155 score: 25.680431

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg010102	Spg010102	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg010102.1-five_prime_utr	Spg010102.1-five_prime_utr-scaffold7:7965904..7966099	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg010102.1-cds	Spg010102.1-cds-scaffold7:7966100..7966402	CDS
Spg010102.1-cds	Spg010102.1-cds-scaffold7:7967141..7967458	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg010102.1-three_prime_utr	Spg010102.1-three_prime_utr-scaffold7:7967459..7967972	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg010102.1	Spg010102.1-protein	polypeptide