Spg008913.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTGCAATCAGGTGCGGAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGGTGAATTTTTGGATTTCCTTGTTTCATCCTTTTCGGAAAAATAAAAATAAAAATAAAAATACACCAACACCAACAGGATAACAAAGAAAGAAACTTTACTTTTCAAGGCTTCACTTTTATTCAATATTGATGTTTATTAAATCTCCATATATATTCTTCTCTCTTTCCAGACCGATACTGCCTCAGTTCTACACGAAGCCATTGAATACATCAAATTCCTCCACGATCAAGTCACTGTATGTTCCATTTACATACATGATCAACTTCAATTTCCTCTCGAAATCCAAATTAATTAATCAACTAATTTGTTTGTAATTTCAGGTCTTAAGTACTCCATACATGAAGAACAACAACGGAATAACACCCATCCAACACCAACAGGTAAAAACTATGGTAATTCAAAGCACAATCTTTCTTCAAATTACGCCACCAAAAATAAAAAAGTTCCCTTTGTTGTGGGTGTCCAGCCCACTTGTTGCACAAGCAAGAGTTTTTTTTTTAAAAAAACTTGTGTTTATGAGCCCAATATGTCGGGTTATGTGTTTAGCCCAATTGAGGTTAAATGAGTGGGCTTGTCTTGTAAGCCTAGGGTTTTTTTTCCTTTGATATGGGATGACCTAAGGAAGACGGCAGAAAGAAAAATACAGAAAAATACACAGAAAAACGGAGAGAAGCAGGGAGAGCAGTGCAGTTCGGATTTTCAGCGACAGCGTTCACAAAGTTGTCGATTGCCGGAGTTTTAACCGTTGGATTTTGCTGAAATTTGGTCAGCTTGTTGGGGACACATAGGGCCTCATTTTGAACGATTGGATCGTCGTTTGGAGCTCTGGTTTGTTCGTAATCGCTGCTGGACAGAACCTGTAAAACTGGAGATATTTTCATCTTCTTTATCTCTTTTGTGTTGATCTCTTATGTATGAAAGTATTGGTGGGTTGTGAATCTTTGTATGACTGATTTGGATTCTTTTCCCTCAATTTTATCATAATAAGAGAAGGTGACAAGGGTGGACTCCTCACAAGTCCCGTGGTTTTTACTCTTCACATCGAAGGGGTTTTCCACGTATAAATCGTGCGTGTTTTTGTGTTTTTTAGTATTCTGAATTTTATGGTTGATTGCTGTCCGTGGTTGGTTGTTTTCTTGGTGATAAATTGGTGATTAATCTGTTGTTTTTTTGGAGCACTATTAATTGGTTGATTGTCTTGGAGGTGATCATAGTGGGTGGTTAATATACTACTTGGGTCCTATCAGTTGGTATCAGAGCAAGGTTTTAATTTAATCATTGTTATGGAGTCTACTAATAGTAGTGGAGGTAGTTCAATGATTAAATTGACATCAACCAATTATTCCATTTGGAGACCGATGATGGAGGATTTGTTATATTGTAAAGATTTGTTTGATCCAATTGAAGCAACCACAGGAGCTGATGGCACCATTGTTAAACCTGCAAAACCAGAGAAAATGGAAGAGAGAGATTGGGGAAAGTTAAAGAGAAAAACTTTGGGGACTATTAGGCAGTGGGTTGATATTAGCATTTTCAACCATGTGTCTCAAGAGTCCGACCCATATGCGTTGTGGAATAAATTGGAAGGTCTTTATGAAAGGAAGACCGCGCATAACAAAGCTTCATTAATCAAGAGGCTTGTTAATTTGAAATTGAAGGGTGGGAAGTCTGTTTCTGAGCATTTGAGTGACTTCCAAGATATTATTAACAAGTTGACTACTATGAAGATTGTTCTTGATGATGAATTGCAGGCTTTGTTCTTGTTGAGTTCTTTGCCGGACAGTTGGGAAACTTTAGTTGTGACTATTAGTAACTCTGCTCCAGAAGGTGTTTTGTCTTTGAATGTTATTAAAGAAAGCATGTTCAATGAAGAGATAAGAAGAAAGGAGATGGGAGTTGATAATTCACATGCTCTTGTTGTTGAGAATCGTGGAAGAAACAAGAGTAGGGGACCCAAAGGTCGTGGTAACTCAAAAGGAAGGTCCAAGTCTAGAGACAAAGAGGCTAGGACATGTCATTACTGCAACAAGCCTGGCCATATAAAAAAGTTTTGCTACCGATGGAAGAAAGAACAAGGTAAGAAGCAAGATTCACAAAAAGAGGGAGATGATAGAAATACTGCAGCAATCACTTCTAAGAGTGATGATGATGTCACCTTGATTTGTGCAACTAGTGAGTGTCATCATGTAGAGAGTTCAGATACAGAGTGGCTGATAGATTCAGGTGCTTCATACCATTGTGTTCCCAAAAGGGAGTATTTCATGAACTATCAATCTGGTGATTTTGGTAGTGTGAAGATGGGAAACCAGAGCTCAGCTAGCATTGTTGGGTTAGGTGATATTCGTGTGAAGACAAGTGTTGGGTGCATGCTTACATTAAAGAATGTGCGCCATATTCTTGATTTACGCCTTAACTTGTTGTCAACAAATGTTCTTGATCAAGAAGGGTTTCGACATACCTTTGCAGATGGTAAATGGAAATTATCTAAGGGTTCAATAACAGTTGCTCGTGGTGAGTTATGTTGCTCTTTGTATAAAACATACTTGAATGTATGTTCTTCTGAGCTGAATGCAGTTGAAGAAAAGAATTCTCCTAACTTGTGGCATCGAAGGCTGGGGCATATGAGTGACAAGGGGATTAAACTGTTGGCAGGTAAATCTATTATCCATGTTGATAAAACAGTTCCTCTTGACCCTTGTGATCATTGTTTGGCAGGCAAGCAACATAGAGTTTCTTTTTCTGGGAAGTCCATCAAAAGGCAAGGAAAGTTGGAGTTAGTTCACTCCGATGTTTGTGGTCCTATTGAGGTTGAGTCTCTTGGTGGCAATAGATATTTTGTCACTTTCATTGATGATGCTACTCGGAGAACTTGGGTGTATATGTTGAAGACAAAAAGCCAAGTGTTCGAGATTTTCAAAAAGTTTCATGCCATGGTAGAGAGGGAGACCGAAAGAAAGTTGAAGCGTCTTCGATCTGACAATGGTGGTGAGTATACTTCGAATGAGTTCAGATATTATTGTTCACAACATGGCATTAGACATGAGAAGACAGAGCCCGGCACACCACAACACAATGGAGTTGCTGAGAGGATGAACAGAACCATTGTAGAGAAGGTGAGATGCATGCTTAGAATGTCTAATCTTCCTAAGACATTTTGGGCTGAAGCAGTGCAATGTGCCGTGTATTTGATTAATCGATCTCCATCGGTTCCTCTTGGTCTAGACATTCCAGAGAGAGCATGGAAGGGACGTGATCCTACTTATTCACATCTGAGAGTCTTTGGCAGCAAGGCATACATGCAGGTGCCTAAAGAACAGAGGTCAAAGCTTGATTCGAAGACCAATCCGTGTGTATTTGTTGGGTATGGGGATGAAGAGTATGGTTATAGGCTCTACGATCCAGAAAAGAAGAAGGTAGTGAGAAGCAGAGATGTAGTATTCTTTGAGCACGAGAAGGGTGCAGATCTTCTGAGTACAAGGTACACTTCTACTTCAGAGTTGTTTATTGATACTACTAATGATTCTACCTCTATTCCCTCTGTTATTCAGCCAACAAATGAGAATGTTGAAGATGTACTTGATGATGTACACGATGATGTTGGTGAGATACAACCTGATGGTACTGTACCAGATCATATTGATGATGATAATCTTGACGAGTCTTCGTCTGATGAAGAAATCCATGATGAAGATGTACATGAGGAAGTGATTCATGAAGAAGTTCATGAGCAGGGGGAGCAACCTACCCCTCAAGTGGAGGATACACAGGTTCGAAGGTCCACTAGAGAGCGTAAACCTTCAACAAGATATCCAAGCTCAGAGTTCATTCTAGTTAGTGAAGATGGAGAGCCAGAGAACTATCAAGAGGTCTTGTCTCATGATGAAAAAGACCAGTGGCTCGATGCAATGAAAGAAGAGATGAATTCCCTGAAAAAGAATGAAACCTATGAGCTAGTGAAACCTCCAAAGGGCAAGAAAGTCTTGAGAAATAGATGGGTTTTCAAGTACAAGAAGAATGGTGAGAAGATAGTGAAGCTCAAAGCCAGATTAGTGGTAAAGGGATGCAACCAGAAAAAGGGCATTGACTTTGATGAGATCTTCTCTCCAGTGGTCAAAATGACATCTATCAGAACAGGGTTGGGTTTAGTAGCAAGTCTTGATCTTGAGTTGGAGCAACTTGATGTAAAAACTGTTTTTTTACATGGTGACTTGCATGAAGAGATCTACATGGAGCAACCTGAAGGATTTGAAGAAAAAGGGAAAGATAAACTTGTTTGCAAGTTGAAGAAGAGTCTTTATGGGCTTAGACAGGCACCAAGGCAATGGTACAAGAAATTTGATTCGTTTATGATAAGCAATGGTTATAAACGAACTACAGCTGATTCTTGTGTGTATTTTAGAAAGTTCCCTGGAGGTAACTTCATCATTCTTCTTCTATATGTAGATGATATGTTGATAGTTGGACAGGATGCAAATATGATTCAAAGTTTGAAGAAAGACTTGTCCAAGTCATTTGACATGAAAGATTTAGGTCCTGCAAAGCAAATTTTAGGCATGGAGATTGCTCGTGACAGGAAAGCTGGGAAATTATGGTTATCCCAGGAGAAGTATATTGAACGGGTGCTTGAAAAGTTCAATATGAAGCATGCTAAGCCTGTTAGTACACTGCTAGCAACTCATTTCAAGCTAAGTAAGACAGCTTGTCCTACAACAGAGAAGGAGAAAGAAGTTATGTCATCCATTCCTTACTCTTCTGCTGTTGGTTCTTTGATGTATGCTATGGTGTGTACTAGACCTGATATTACACATGCAGTTGGTTTAGAGAGTCGTTTCTTATCCAATCCAGGTAAGACTCATTGGGAAGCAATGAAGTGGATTTTCAGATACTTGCGGGGTACCTCCAAATTGAGTTTGTGTTATGGAGGTGGCAAACCTATACTTGAAGGCTATACTGATGCAGACATGGCAGGTGATTTTGATAATAGAAAGTCTACCTCAGGTTATGTGTTTACATTCTCAGGGGGAGCCATCTCATGGCAATCCAAGCTACAAAAATGTGTAGCATTGTCCACAACTGAGGCAGAGTATATTGCAGCAGTGGAAGCAAGCAAGGAAATGTTATGGCTTAAAAGGTTTCTTCAAGAGTTGGGTTTGAAGCAACATGAGTATGTAGTATTCTGTGATAGTCAGAGTGCTATGGATTTGAGCAAGAATTCGATGTATCATGCTCGCACCAAACACATTGACATTAGATATCATTGGTTGCGATATGTGATTGAAGAGAAGAGAATGAAACTGAAGAAAGTCCACACTGACAAGAACAGTGCAGATATGTTAACTAAAGTAGTTCCCAGAAGCAAGATCGAGCTTTGTAGTAAGCTTGTCGGGATGAGGTTCAAGTGATCATGGATGTGATTGTGTCTTCCCCGTGATGGGCTGGAGGGGGAGATTGTTGTGGGTGTCCAGCCCACTTGTTGCACAAGCAAGAGTTTTTTTTTAAAAAAACTTGTGTTTATGAGCCCAATATGTCGGGTTATGTGTTTAGCCCAATTGAGGTTAAATGAGTGGGCTTGTCTTGTAAGCCTAGGGTTTTTTTTTCCTTTGATATGGGATGACCTAAGGAAGACGGCAGAAAGAAAAATACAGAAAAATACACAGAAAAACGGAGAGAAGCAGGGAGAGCAGTGCAGTTCGGATTTTCAGCGACAGCGTTCACAAAGTTGTCGATTGCCGGAGTTTTAACCGTTGGATTTTGCTGAAATTTGGTCAGCTTGTTGGGGACACATAGGGCCTCATTTTGAACGATTGGATCGTCGTTTGGAGCTCTGGTTTGTTCGTAATCGCTGCTGGACAGAACCTGTAAAACTGGAGATATTTTCATCTTCTTTATCTCTTTTGTGTTGATCTCTTATGTATGAAAGTATTGGTGGGTTGTGAATCTTTGTATGACTGATTTGGATTCTTTTCCCTCAATTTTATCATAATAAGAGAAGGTGACAAGGGTGGACTCCTCACAAGTCCCGTGGTTTTTACTCTTCACATCGAAGGGGTTTTCCACGTATAAATCGTGCGTGTTTTTGTGTTTTTTAGTATTCTGAATTTTATGGTTGATTGCTGTCCGTGGTTGGTTGTTTTCTTGGTGATAAATTGGTGATTAATCTGTTGTGTTTTTGGAGCACTATTAATTGGTTGATTGTCTTGGAGGTGATCATAGTGGGTGGTTAATATACTACTTGGGTCCTATCACCCTTTACATATTTTTTCAATCTCAGGTATCTGAAAAAGCAGACCCAGATTGCCCAAAACAAGATCTGAGAAGCCGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACAAACGCAACGACGGCGGATTTCTGGACCCCGATGTTCGGCGGAACATTCCGGTGAAGAAATGA ATGGTTTTGCAATCAGGTGCGGAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGGTCTTAAGTACTCCATACATGAAGAACAACAACGGAATAACACCCATCCAACACCAACAGGTAAAAACTATGCCGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACAAACGCAACGACGGCGGATTTCTGGACCCCGATGTTCGGCGGAACATTCCGGTGAAGAAATGA ATGGTTTTGCAATCAGGTGCGGAAGAGAAGCTAGGGGACCGAGTCACTGCCCTTCAACAACTGGTTTCACCGTTTGGAAAGGTCTTAAGTACTCCATACATGAAGAACAACAACGGAATAACACCCATCCAACACCAACAGGTAAAAACTATGCCGAGGGCTTTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGACAAACGCAACGACGGCGGATTTCTGGACCCCGATGTTCGGCGGAACATTCCGGTGAAGAAATGA MVLQSGAEEKLGDRVTALQQLVSPFGKVLSTPYMKNNNGITPIQHQQVKTMPRALFGADFKHIPSDKRNDGGFLDPDVRRNIPVKK Homology
BLAST of Spg008913.1 vs. NCBI nr
Match: XP_023544490.1 (transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 70.9 bits (172), Expect = 6.2e-09 Identity = 39/63 (61.90%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. NCBI nr
Match: XP_008439936.1 (PREDICTED: transcription factor bHLH112-like isoform X2 [Cucumis melo]) HSP 1 Score: 70.5 bits (171), Expect = 8.1e-09 Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Spg008913.1 vs. NCBI nr
Match: XP_011658178.1 (transcription factor bHLH112 isoform X2 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 8.1e-09 Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Spg008913.1 vs. NCBI nr
Match: XP_022977366.1 (transcription factor bHLH112-like [Cucurbita maxima]) HSP 1 Score: 70.5 bits (171), Expect = 8.1e-09 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. NCBI nr
Match: KAA0052738.1 (transcription factor bHLH112-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 1.4e-08 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.4e-05 Identity = 26/61 (42.62%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy TrEMBL
Match: A0A6J1IJP7 (transcription factor bHLH112-like OS=Cucurbita maxima OX=3661 GN=LOC111477714 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.9e-09 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy TrEMBL
Match: A0A1S3AZZ2 (transcription factor bHLH112-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484572 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.9e-09 Identity = 38/61 (62.30%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy TrEMBL
Match: A0A5D3CNF2 (Transcription factor bHLH112-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006930 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy TrEMBL
Match: A0A5A7UBZ4 (Transcription factor bHLH112-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003520 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. ExPASy TrEMBL
Match: A0A0A0KHH2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516730 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Spg008913.1 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06 Identity = 26/61 (42.62%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Spg008913.1 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.7e-04 Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 0
BLAST of Spg008913.1 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 4.9e-04 Identity = 19/50 (38.00%), Postives = 27/50 (54.00%), Query Frame = 0
BLAST of Spg008913.1 vs. TAIR 10
Match: AT2G20100.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 4.9e-04 Identity = 19/50 (38.00%), Postives = 27/50 (54.00%), Query Frame = 0
BLAST of Spg008913.1 vs. TAIR 10
Match: AT4G05170.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 4.9e-04 Identity = 18/20 (90.00%), Postives = 20/20 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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