Spg008595.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACAAGAAGGCCAGTCTTTGCATGGCTCAGGGAAGCAATTTGGGCAGCCTTTTGGATGGTGGTAATGAAGAAAAATCTGAAATTAAATTGGGCAGGTGGCAAGTGTAACGCATGCCATAGCTTTCAAATCCAAGATTGAATGGGTTGCCTTGCATGAATGCATTAAGCTGGTGGTTTCATTTCCTTAAGACATGCATTCGAAAAGTTGAAGACTCAAGGGCTCTCGGTTTTCTCATCCCTCCCACGCTAGCTGAGAAAAAAATTCTACTATCAGCCTTCTCGGTTTTGAAGTTTTGCTGTTAATTCTTGTAGTTATTCATGGGGCCTCGATCGATTGCAAAGAAAATATTTAGACTCAAGGTCCTTGGTGATGAAGGGGTGTCGGCAAGAGTTAAAGAAAAGCAGCCAGCTCAAAAGGAATTTAGCATGGTGCAGCCTTCTTCTCCCCCTCGAAGAAAAGCATCAAAGGATAAAGGGAAAGAGCCCATGTCATCTTCAAGGGAAGAAGCAAGGAAGTTTGCTAGTGTAATGGCTGCCTCAAGGTTTGAGGACTTGAAAAACAGAGAGTTGCTGATAGGAAGAGGATTTGACTCAAACTTGGACAATCTTCCTCACTTTTTGGCCGTGATTATTCGCAACCAAAGCTGGGAAAAATTATGCAGAAACCCGAGCCAGAAGTGGCTAACATTGTGAAAGAATTCTACGTCAACTTTCTAGATAACGGACTTTGGATGACAAAGGTTCGCGGCCAGCTGGTGCATTGGAGCCCCACAGTGATTAACGAATACTATGATGTCCCGGATTTCCCCTATGCCATCTTCAACTCGATGGAGATTGCCCCCTCAAACGATCAACTCCAAGCCGCTTTGATAACTTGTGCAATGGATGGAGAATGCTGGAAAATGTCTAAGAATAGAAATAGATCCTTGCTTTCGGCCTATGTCACATTGGAGGCTAATATTTGGTTATGGTTTGTCTGAAATCGCCTTCTTCCCACCACTCATGACACGATTGTTTCCAAAGAGAGAATGCTCCTCATTTTTTCTATCCTAAGCCTCATTAGCATCGATGTCGGAAGGATTATTGCTAGGGAGATTGCTTCTTGTGCCCTAAAGAAATCGGGGAAGTTATTCTTTCCGAATCTCATTACGGATCTTTGCCTCAAAGCTAATGTGCAATTAACGGAGGAAGATGAAGTGGTGATGGATAAGGGCATTATAGATACGACAACTATAACCCGCCTCATGGGTGATGGAAAGGGGAGAAAAATCTCAACAGTGGCTAGTGGGATCGAAGAGCTCCTAAAGCAGCAAAAAGAGCTATTGCATCAAGTGTAATATCAAGGGGCGCAACAGAGGCTATATTGGGAATATGCTCTCAAGCGGGATGAAATGGTGGAGAAAGCCTTTAATTCTGACCCTGAGGAAGTACTTCCACCTTTCCCTCCATTCCCCGAAGGAGTACTTAATCCTTGGTGCCCGCCCTCATCCGTTGAGGATGATTATGAAGATGGAGCTGACGATGAAGATTGA ATGGGAAACAAGAAGGCCAGTCTTTGCATGGCTCAGGGAAGCAATTTGGGCAGCCTTTTGGATGGTGGTAATGAAGAAAAATCTGAAATTAAATTGGGCAGACATGCATTCGAAAAGTTGAAGACTCAAGGGCTCTCGTTATTCATGGGGCCTCGATCGATTGCAAAGAAAATATTTAGACTCAAGGTCCTTGGTGATGAAGGGGTGTCGGCAAGAGTTAAAGAAAAGCAGCCAGCTCAAAAGGAATTTAGCATGGTGCAGCCTTCTTCTCCCCCTCGAAGAAAAGCATCAAAGGATAAAGGGAAAGAGCCCATGTCATCTTCAAGGGAAGAAGCAAGGAAGTTTGCTAGTAAACCCGAGCCAGAAGTGGCTAACATTGTGAAAGAATTCTACGTCAACTTTCTAGATAACGGACTTTGGATGACAAAGGTTCGCGGCCAGCTGGTGCATTGGAGCCCCACAGTGATTAACGAATACTATGATGTCCCGGATTTCCCCTATGCCATCTTCAACTCGATGGAGATTGCCCCCTCAAACGATCAACTCCAAGCCGCTTTGATAACTTGTGCAATGGATGGAGAATGCTGGAAAATGTCTAAGAATAGAAATAGATCCTTGCTTTCGGCCTATGTCACATTGGAGGCTAATATTTGGTTATGGATTATTGCTAGGGAGATTGCTTCTTGTGCCCTAAAGAAATCGGGGAAGTTATTCTTTCCGAATCTCATTACGGATCTTTGCCTCAAAGCTAATGTGCAATTAACGGAGGAAGATGAAGTGGTGATGGATAAGGGCATTATAGATACGACAACTATAACCCGCCTCATGGGGGCGCAACAGAGGCTATATTGGGAATATGCTCTCAAGCGGGATGAAATGGTGGAGAAAGCCTTTAATTCTGACCCTGAGGAAGTACTTCCACCTTTCCCTCCATTCCCCGAAGGAGTACTTAATCCTTGGTGCCCGCCCTCATCCGTTGAGGATGATTATGAAGATGGAGCTGACGATGAAGATTGA ATGGGAAACAAGAAGGCCAGTCTTTGCATGGCTCAGGGAAGCAATTTGGGCAGCCTTTTGGATGGTGGTAATGAAGAAAAATCTGAAATTAAATTGGGCAGACATGCATTCGAAAAGTTGAAGACTCAAGGGCTCTCGTTATTCATGGGGCCTCGATCGATTGCAAAGAAAATATTTAGACTCAAGGTCCTTGGTGATGAAGGGGTGTCGGCAAGAGTTAAAGAAAAGCAGCCAGCTCAAAAGGAATTTAGCATGGTGCAGCCTTCTTCTCCCCCTCGAAGAAAAGCATCAAAGGATAAAGGGAAAGAGCCCATGTCATCTTCAAGGGAAGAAGCAAGGAAGTTTGCTAGTAAACCCGAGCCAGAAGTGGCTAACATTGTGAAAGAATTCTACGTCAACTTTCTAGATAACGGACTTTGGATGACAAAGGTTCGCGGCCAGCTGGTGCATTGGAGCCCCACAGTGATTAACGAATACTATGATGTCCCGGATTTCCCCTATGCCATCTTCAACTCGATGGAGATTGCCCCCTCAAACGATCAACTCCAAGCCGCTTTGATAACTTGTGCAATGGATGGAGAATGCTGGAAAATGTCTAAGAATAGAAATAGATCCTTGCTTTCGGCCTATGTCACATTGGAGGCTAATATTTGGTTATGGATTATTGCTAGGGAGATTGCTTCTTGTGCCCTAAAGAAATCGGGGAAGTTATTCTTTCCGAATCTCATTACGGATCTTTGCCTCAAAGCTAATGTGCAATTAACGGAGGAAGATGAAGTGGTGATGGATAAGGGCATTATAGATACGACAACTATAACCCGCCTCATGGGGGCGCAACAGAGGCTATATTGGGAATATGCTCTCAAGCGGGATGAAATGGTGGAGAAAGCCTTTAATTCTGACCCTGAGGAAGTACTTCCACCTTTCCCTCCATTCCCCGAAGGAGTACTTAATCCTTGGTGCCCGCCCTCATCCGTTGAGGATGATTATGAAGATGGAGCTGACGATGAAGATTGA MGNKKASLCMAQGSNLGSLLDGGNEEKSEIKLGRHAFEKLKTQGLSLFMGPRSIAKKIFRLKVLGDEGVSARVKEKQPAQKEFSMVQPSSPPRRKASKDKGKEPMSSSREEARKFASKPEPEVANIVKEFYVNFLDNGLWMTKVRGQLVHWSPTVINEYYDVPDFPYAIFNSMEIAPSNDQLQAALITCAMDGECWKMSKNRNRSLLSAYVTLEANIWLWIIAREIASCALKKSGKLFFPNLITDLCLKANVQLTEEDEVVMDKGIIDTTTITRLMGAQQRLYWEYALKRDEMVEKAFNSDPEEVLPPFPPFPEGVLNPWCPPSSVEDDYEDGADDED Homology
BLAST of Spg008595.1 vs. NCBI nr
Match: PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus]) HSP 1 Score: 75.5 bits (184), Expect = 9.9e-10 Identity = 54/202 (26.73%), Postives = 82/202 (40.59%), Query Frame = 0
BLAST of Spg008595.1 vs. NCBI nr
Match: PIN07564.1 (hypothetical protein CDL12_19862 [Handroanthus impetiginosus]) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-09 Identity = 53/202 (26.24%), Postives = 83/202 (41.09%), Query Frame = 0
BLAST of Spg008595.1 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis]) HSP 1 Score: 66.6 bits (161), Expect = 4.6e-07 Identity = 52/202 (25.74%), Postives = 86/202 (42.57%), Query Frame = 0
BLAST of Spg008595.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 66.2 bits (160), Expect = 6.0e-07 Identity = 81/386 (20.98%), Postives = 136/386 (35.23%), Query Frame = 0
BLAST of Spg008595.1 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 64.3 bits (155), Expect = 2.3e-06 Identity = 67/292 (22.95%), Postives = 105/292 (35.96%), Query Frame = 0
BLAST of Spg008595.1 vs. ExPASy TrEMBL
Match: A0A2G9G807 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.8e-10 Identity = 54/202 (26.73%), Postives = 82/202 (40.59%), Query Frame = 0
BLAST of Spg008595.1 vs. ExPASy TrEMBL
Match: A0A2G9GQI5 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19862 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.3e-10 Identity = 53/202 (26.24%), Postives = 83/202 (41.09%), Query Frame = 0
BLAST of Spg008595.1 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-07 Identity = 52/202 (25.74%), Postives = 86/202 (42.57%), Query Frame = 0
BLAST of Spg008595.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-07 Identity = 81/386 (20.98%), Postives = 136/386 (35.23%), Query Frame = 0
BLAST of Spg008595.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06 Identity = 67/292 (22.95%), Postives = 105/292 (35.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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