Spg008158.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg008158.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 53283738 .. 53285994 (+)
Sequence length252
RNA-Seq ExpressionSpg008158.1
SyntenySpg008158.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAACAATGCAAACGGTGTCCAGTCATCGTGCCAATAATGAAATCGAGTATTTGGTTCGCGATTTACCTTTGGAATCGCGTACCGTGTACGCAATTTACCCCTATAATCACAATCCACGACTGCGATTTACCTAACTCGCAACCCAAGTGCATGATTTAGCTACCCTACTTTTGGAATTAGTTTCAGAACTCCTCTATATTTGTTTTTTTTTATAAAAAACTACATTATTTATAAAAAAAAAAAAATCATACGACATGATAGATGAAATGACCATTAGGCCCCTTACGTGAACTAACCATAAGTTACCTCTGTTGATGCATGTCTACCAATATTGTTGCTTAGGGAGTATTTTTAAATACTAATTATTTTCCCTAATATATAATTGCAGGTAACGACAAATGTGTACAGAACACGTGACATATAATGTTGCTGGACGAGCTATGGAATTCGTAGATTAGACTTCTGCTTTATAATGTTTTTGAACTCCTTCATTGCATATTTGAAACGTTTTATTTATGATGGATTTAGTCTTGCGTTGAGAATTTTATTTGAAATGAGAAAATTTCATTCCTTCATGTTTTAATTGGGATCCCAGGCCGGAAGGTTATTTTCAATTAGCTAAGCCTATTTTGTGTTAAATCTCTATTTTCCTCGTGGCTCTCTAAAAAGCAAGTAGGTAATGCATGTGGTAATGACCCTAGGGATTTGTCATGAAATGTAGGGTCGTTACATATTTCAACAATGATAAATCAATTAAACAAGTGTAAAACATGATTATAAGTTTGTTTGAAAATATAGGTTGAATTATATGTTAAGTCCCTGAACTTTCAGGCTCGTGCCAATTTGGTCTCTAAACTATAAATAGTGCCTAATAATTCCCTAAACTTTCAATTTTGTGTCTAATATGTCCTTGAACTTTAAAAATGTCTACTATAGGTTCCTAAACTTTCAATTTTAAATATAATAGGTCCCTAGCATATTCAAAGTTTTTTAAAAATTAATCAATCTATCATATATAAAATTGAATTTTATGCCGTTTGGGACCCTAAAGTCTTCTAATTTTGTCTTGAGTAGGCTTCTGAGTTTTAAAAACGGTTGAATTGGTTAAGGATTTATTAGACACAAATTTAAAGTTGAGGAACATATTGGATAAAAAATGAAAATTTGAGGACCTAATTGGATATTTTCTAAAGTTCAGGTACTATTGGACGCAAAATTGAACGTTTGAAGACCTATTTGACATTTTTTCAAGTTCAAGAACGAGACTGAAAAAGCCCCTAAAAGTTCAAGGATTAAAATATAAAATATTATTCCGAGCATAGAGGGTGACCAAGTGTACCTTTCGTTGTTTCAAAGAGATAAAAATGTGCTTATTAATAACCAATTCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAATAGAAAACTGAAATATATTATTAGCCATGGTGAGAAATGGTATTGCCTATATTTATACGAAATACTTATAATAGAATACCAACCAATTTAAACATAGTGGACTACTATTCTTAGCAAGTGGCAGTTTCAATAATACCTCTGAAAATTTTATTATATATAACGAAAAAACCTAAGTTCGATTCAAGGCAGGCAATTAACAAATAAAAAGTGAAACTTCCCAGAGAAAGTCTCTCTTGAACTATCAAACACAAAGCTTTGCAATTAATATATTTGTCAAAGATGGTTCAAAGAGCATCATCAGTTTCATGCAAATGCCTCCTTCAGTTGTTGAGCTTCTTTTTCGTTTTCTTCCTCGTTATCACAACGACAGGTAACTAGAACAAAAAAAATTAACCCTCAATCAATTTTTTTTTTTTTTTTTCATTTTCTATTTATTATTGTTTTTGTTTAGGAATTGAATTTTCCATTCTTACATATGGTATTTTAGGTTCATTGGCTGGACGAAGTTTGAAAGAAGAGATGAGTACAGGTGACTCCGATCTTCAACAAATGATCATCAAAACCCGCGACGAGATGCCAACACAAGTCGATGACGGGTGGGCAAATGATGACCAGTTGTTGGCCCAATCCGCCAACCCGTAAGAAAAAAAATCAACAACTAAATATATATAATATGAATGATTGTTATATAGTATTTGTTTAAATGATTGTTATATCATTCTTTCCGAAGAAATTTTTGAAATGACAAAATGGAATAACATGATTTGGTAAGTCTCTACAAATCCAAAAGTATATATGAGCTACATGGAGAAGTTACTTAAAAAAGACAAGA

mRNA sequence

ATGCTAACAATGCAAACGGTGTCCAGTCATCGTGCCAATAATGAAATCGAGTATTTGGTTCGCGATTTACCTTTGGAATCGCGTACCGTGCCGGAAGGTTCATTGGCTGGACGAAGTTTGAAAGAAGAGATGAGTACAGGTGACTCCGATCTTCAACAAATGATCATCAAAACCCGCGACGAGATGCCAACACAAGTCGATGACGGGTGGGCAAATGATGACCAGTTGTTGGCCCAATCCGCCAACCCGTAA

Coding sequence (CDS)

ATGCTAACAATGCAAACGGTGTCCAGTCATCGTGCCAATAATGAAATCGAGTATTTGGTTCGCGATTTACCTTTGGAATCGCGTACCGTGCCGGAAGGTTCATTGGCTGGACGAAGTTTGAAAGAAGAGATGAGTACAGGTGACTCCGATCTTCAACAAATGATCATCAAAACCCGCGACGAGATGCCAACACAAGTCGATGACGGGTGGGCAAATGATGACCAGTTGTTGGCCCAATCCGCCAACCCGTAA

Protein sequence

MLTMQTVSSHRANNEIEYLVRDLPLESRTVPEGSLAGRSLKEEMSTGDSDLQQMIIKTRDEMPTQVDDGWANDDQLLAQSANP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg008158Spg008158gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg008158.1-cdsSpg008158.1-cds-scaffold1:53283738..53283826CDS
Spg008158.1-cdsSpg008158.1-cds-scaffold1:53284337..53284344CDS
Spg008158.1-cdsSpg008158.1-cds-scaffold1:53285650..53285804CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg008158.1-three_prime_utrSpg008158.1-three_prime_utr-scaffold1:53285805..53285994three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg008158.1Spg008158.1-proteinpolypeptide