Spg007712.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg007712.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor bHLH137-like
Location	scaffold2: 194519 .. 195799 (+)
Sequence length	867
RNA-Seq Expression	Spg007712.1
Synteny	Spg007712.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCCAATTCACGTCTTCTGATTTTGACTCTCTTGTCCTCTCAAAAATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAATCTGTTAATACAGCTGCTGCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAAGAGGAAAAACTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCAAAAACACAAAACCAAAACCATAAAGTTTCTCCACCAGCACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGGTATAATCATTTGCATTTCATTACCCCACAATAACACAATCTTAAACTTAAACTTTCCTCTCTTAGCTTAGCTTACTAATTTTCTCAAATGGGGTTTCACTTTTCAGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTGCACCTAGCTACTTCTATTTCTCTCTTCCACCTTCAACTTCCTTTACCATATCATATATTAATTAACTACTTTAATAACATTAATTACATACATAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAAATAAATAAAACCAATTAATTAATTACCAGCTATTTATATATTTAATTATTTATTTGTGTGGATTAATTGGATACTAATTTTATAATGGAAATAATCGTTATTCTGTGTAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCATCGGTAGACCAGACTCAGAGCCAGAGGTGCTATAAACATGCAATATATAACTTGTTCATTTTATTTTCTTTTTAATTCTTTTTTTCATGCATATTGTCCATTTCATTGTTAGTTCAGATATTGAATGGCAATGGCGTGGTGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACAATATGGCACCATGCAACGACACATTTCAGACCAGAGGCAGCTTTATCCCACTGGACATGATTGTTAGTCCGTCTCCATTTTTGCTGGAGCATGCTGGGAATAACACTACTTCTCTGCTGCATCTGTCATGA

mRNA sequence

ATGAATTCCCAATTCACGTCTTCTGATTTTGACTCTCTTGTCCTCTCAAAAATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAATCTGTTAATACAGCTGCTGCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAAGAGGAAAAACTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCAAAAACACAAAACCAAAACCATAAAGTTTCTCCACCAGCACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCATCGGTAGACCAGACTCAGAGCCAGAGATATTGAATGGCAATGGCGTGGTGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACAATATGGCACCATGCAACGACACATTTCAGACCAGAGGCAGCTTTATCCCACTGGACATGATTGTTAGTCCGTCTCCATTTTTGCTGGAGCATGCTGGGAATAACACTACTTCTCTGCTGCATCTGTCATGA

Coding sequence (CDS)

ATGAATTCCCAATTCACGTCTTCTGATTTTGACTCTCTTGTCCTCTCAAAAATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAATCTGTTAATACAGCTGCTGCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAAGAGGAAAAACTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCAAAAACACAAAACCAAAACCATAAAGTTTCTCCACCAGCACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCATCGGTAGACCAGACTCAGAGCCAGAGATATTGAATGGCAATGGCGTGGTGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCAAATTCAGAGGAAGCAGAATTGGCATATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACAATATGGCACCATGCAACGACACATTTCAGACCAGAGGCAGCTTTATCCCACTGGACATGATTGTTAGTCCGTCTCCATTTTTGCTGGAGCATGCTGGGAATAACACTACTTCTCTGCTGCATCTGTCATGA

Protein sequence

MNSQFTSSDFDSLVLSKMSASTELAHIPHFHIPQPQTQSVNTAAAAAADHNITIPCKRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAYNMANSEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSPSPFLLEHAGNNTTSLLHLS

Homology

[Close]

BLAST of Spg007712.1 vs. NCBI nr
Match: XP_038879024.1 (transcription factor bHLH137-like [Benincasa hispida])

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-56
Identity = 164/328 (50.00%), Postives = 190/328 (57.93%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST------ELAHIPHF-HIPQPQTQSVNT------AAAAAA 61
           NSQF  S+ DSLVLSKM+ +       E    PH+ H+  PQ QSV T      +  A++
Sbjct: 3   NSQFLPSELDSLVLSKMNNAACSWELEETPQTPHYDHLLPPQIQSVYTNNTTTHSPNASS 62

Query: 62  DHNITIPCKRKNWP--------------HAKCYNVRAKK------PKTQNQNHKVSPPAP 121
           +++I +P      P               ++CY  RAK        K + Q+H   PPA 
Sbjct: 63  NYHINMPSSHSYPPSEDPTNESGNGGDRKSRCYK-RAKAGGGSGCKKLKPQHHHHHPPAD 122

Query: 122 APAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 181
               GYIHVRARRGQATDSHSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIIN
Sbjct: 123 DHHHGYIHVRARRGQATDSHSLAERLRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 182

Query: 182 YVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELA 241
           YVQSLQNQVEFLSMKLASVNPI YDFG D P+VFIGRP S  EILN NG+ + S+     
Sbjct: 183 YVQSLQNQVEFLSMKLASVNPIQYDFGTDCPQVFIGRPAS--EILNANGIASRSD----- 242

Query: 242 YNMANSEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVS 289
                                         QQAELAYN+AP N TFQ  G       I++
Sbjct: 243 ------------------------------QQAELAYNIAPYN-TFQATGGGGDGSSILT 288

[Close]

BLAST of Spg007712.1 vs. NCBI nr
Match: XP_022987143.1 (transcription factor bHLH137-like [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-52
Identity = 155/315 (49.21%), Postives = 187/315 (59.37%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST----ELAHIPHFH---IPQPQTQSVNTAA---------- 61
           NSQF  S  DS  LSKM+  +    E   IPHFH    PQ Q+ SV   A          
Sbjct: 3   NSQFLPSP-DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQSSSVQQTAHHLPPRILPT 62

Query: 62  ---AAAADHNITIPCKRKNWPHAKCYNVRAKKP--------KTQNQNHKVSPPAPAPAPG 121
                 + H+++ PCK            RA KP        K + Q+H    P  +P PG
Sbjct: 63  ATNTLPSSHSLS-PCKEDPNERGGDGKRRAYKPAKAGGGRKKLKTQDH----PQVSPPPG 122

Query: 122 YIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 181
           YIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL
Sbjct: 123 YIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 182

Query: 182 QNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAYNMAN 241
           Q+Q+E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELAYNMA+
Sbjct: 183 QSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELAYNMAS 242

Query: 242 SEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSPSPFL 289
               +         ++ +         AE               GSFIP+DM  +PS   
Sbjct: 243 CNTFQATGGGGGGGDSPIL-------TAE--------------NGSFIPVDM--NPSQLF 283

[Close]

BLAST of Spg007712.1 vs. NCBI nr
Match: XP_022921620.1 (transcription factor bHLH137-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 216.1 bits (549), Expect = 4.0e-52
Identity = 156/320 (48.75%), Postives = 188/320 (58.75%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST----ELAHIPHF-HIPQPQTQSVNTAAAAAADHNI---- 61
           NSQF  S  DS  LSKM+  +    E   IPHF H+  PQ QS ++A   A  H++    
Sbjct: 3   NSQFHPSP-DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQS-SSAQQTAHHHHLPPRI 62

Query: 62  ------TIPC------------------KRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAP 121
                 ++P                   KR+ +  AK    R KK KTQ+       P  
Sbjct: 63  LPTTTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR-KKLKTQDH------PQV 122

Query: 122 APAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 181
           +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIIN
Sbjct: 123 SPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 182

Query: 182 YVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELA 241
           YVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELA
Sbjct: 183 YVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELA 242

Query: 242 YNMANSEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVS 289
           YNMA+    +             A N                       GSFIP+DM  +
Sbjct: 243 YNMASCNTFQATGGGGGDSPILTAEN-----------------------GSFIPVDM--N 283

[Close]

BLAST of Spg007712.1 vs. NCBI nr
Match: XP_023516576.1 (transcription factor bHLH74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 8.9e-52
Identity = 156/319 (48.90%), Postives = 185/319 (57.99%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST----ELAHIPHF-HIPQPQTQSVNTAAAAAADH------ 61
           NSQF  S  DS  LSKM+  +    E   IPHF H+  PQ QS +    A   H      
Sbjct: 3   NSQFLPSP-DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQSSSVQQTAHHHHLPPRIL 62

Query: 62  -NITIPC--------------------KRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAPA 121
              T P                     KR+ +  AK    R KK KTQ+       P   
Sbjct: 63  PTATNPLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR-KKLKTQDH------PQVP 122

Query: 122 PAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINY 181
           P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIINY
Sbjct: 123 PPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINY 182

Query: 182 VQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAY 241
           VQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELAY
Sbjct: 183 VQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELAY 242

Query: 242 NMANSEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSP 289
           NMA+    +         ++ +         AE               GSFIP+DM  +P
Sbjct: 243 NMASCNTFQATGGGGGGGDSPIL-------TAE--------------NGSFIPVDM--NP 285

[Close]

BLAST of Spg007712.1 vs. NCBI nr
Match: XP_022921619.1 (transcription factor bHLH74-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-51
Identity = 151/311 (48.55%), Postives = 183/311 (58.84%), Query Frame = 0


Query: 11  DSLVLSKMSAST----ELAHIPHF-HIPQPQTQSVNTAAAAAADHNI----------TIP 70
           DS  LSKM+  +    E   IPHF H+  PQ QS ++A   A  H++          ++P
Sbjct: 23  DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQS-SSAQQTAHHHHLPPRILPTTTNSLP 82

Query: 71  C------------------KRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAPAPAPGYIHV 130
                              KR+ +  AK    R KK KTQ+       P  +P PGYIHV
Sbjct: 83  SSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR-KKLKTQDH------PQVSPPPGYIHV 142

Query: 131 RARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQV 190
           RARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ+Q+
Sbjct: 143 RARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQI 202

Query: 191 EFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAYNMANSEEA 250
           E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELAYNMA+    
Sbjct: 203 ELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELAYNMASCNTF 262

Query: 251 ELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSPSPFLLEHA 289
           +             A N                       GSFIP+DM  +PS   L++ 
Sbjct: 263 QATGGGGGDSPILTAEN-----------------------GSFIPVDM--NPSQVFLDY- 295

[Close]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot
Match: Q93W88 (Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.2e-36
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 69  VRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQT 128
           V  +K K Q +  K  PP       YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ 
Sbjct: 113 VEGRKSKKQKRGSKEEPPT-----DYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 172

Query: 129 LVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDS 188
           LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D   + +     
Sbjct: 173 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGLILQSEMG 231

Query: 189 EPEI 193
            PE+
Sbjct: 233 SPEV 231

[Close]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-33
Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 78  NQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVT 137
           N+++   P  P P   YIHVRARRGQATDSHSLAER+RREKI +RMK+LQ LVPGC+KVT
Sbjct: 284 NKSNNTKP--PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVT 343

Query: 138 GKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 178
           GKALMLDEIINYVQSLQ QVEFLSMKL+SVN    DF +D
Sbjct: 344 GKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381

[Close]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.8e-32
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 90  PAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINY 149
           P   YIHVRARRGQATDSHSLAER+RREKIS+RMK+LQ LVPGC+KVTGKALMLDEIINY
Sbjct: 251 PYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 310

Query: 150 VQSLQNQVEFLSMKLASVNPILYDFGMD 178
           VQSLQ QVEFLSMKL+SVN  L DF MD
Sbjct: 311 VQSLQRQVEFLSMKLSSVNTRL-DFNMD 337

[Close]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-32
Identity = 77/110 (70.00%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 68  NVRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQ 127
           N   KK  +  Q  K S  +  P  GYIHVRARRGQAT+SHSLAER+RREKIS+RMK LQ
Sbjct: 276 NSPGKKSNSGKQQGKQS--SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 335

Query: 128 TLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 178
            LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + DF ++
Sbjct: 336 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382

[Close]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot
Match: Q9C670 (Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 78  NQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVT 137
           N+ +    P+ +   GYIH+RARRGQAT+SHSLAER+RREKIS+RMK LQ LVPGC KVT
Sbjct: 204 NKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVT 263

Query: 138 GKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDN 179
           GKA+MLDEIINYVQSLQ Q+EFLSMKL++VNP+L DF +++
Sbjct: 264 GKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVL-DFNLES 303

[Close]

BLAST of Spg007712.1 vs. ExPASy TrEMBL
Match: A0A6J1JIL6 (transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 6.7e-53
Identity = 155/315 (49.21%), Postives = 187/315 (59.37%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST----ELAHIPHFH---IPQPQTQSVNTAA---------- 61
           NSQF  S  DS  LSKM+  +    E   IPHFH    PQ Q+ SV   A          
Sbjct: 3   NSQFLPSP-DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQSSSVQQTAHHLPPRILPT 62

Query: 62  ---AAAADHNITIPCKRKNWPHAKCYNVRAKKP--------KTQNQNHKVSPPAPAPAPG 121
                 + H+++ PCK            RA KP        K + Q+H    P  +P PG
Sbjct: 63  ATNTLPSSHSLS-PCKEDPNERGGDGKRRAYKPAKAGGGRKKLKTQDH----PQVSPPPG 122

Query: 122 YIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 181
           YIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL
Sbjct: 123 YIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 182

Query: 182 QNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAYNMAN 241
           Q+Q+E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELAYNMA+
Sbjct: 183 QSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELAYNMAS 242

Query: 242 SEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSPSPFL 289
               +         ++ +         AE               GSFIP+DM  +PS   
Sbjct: 243 CNTFQATGGGGGGGDSPIL-------TAE--------------NGSFIPVDM--NPSQLF 283

[Close]

BLAST of Spg007712.1 vs. ExPASy TrEMBL
Match: A0A6J1E6B0 (transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 156/320 (48.75%), Postives = 188/320 (58.75%), Query Frame = 0


Query: 2   NSQFTSSDFDSLVLSKMSAST----ELAHIPHF-HIPQPQTQSVNTAAAAAADHNI---- 61
           NSQF  S  DS  LSKM+  +    E   IPHF H+  PQ QS ++A   A  H++    
Sbjct: 3   NSQFHPSP-DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQS-SSAQQTAHHHHLPPRI 62

Query: 62  ------TIPC------------------KRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAP 121
                 ++P                   KR+ +  AK    R KK KTQ+       P  
Sbjct: 63  LPTTTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR-KKLKTQDH------PQV 122

Query: 122 APAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 181
           +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIIN
Sbjct: 123 SPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIIN 182

Query: 182 YVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELA 241
           YVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELA
Sbjct: 183 YVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELA 242

Query: 242 YNMANSEEAELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVS 289
           YNMA+    +             A N                       GSFIP+DM  +
Sbjct: 243 YNMASCNTFQATGGGGGDSPILTAEN-----------------------GSFIPVDM--N 283

[Close]

BLAST of Spg007712.1 vs. ExPASy TrEMBL
Match: A0A6J1E106 (transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 9.6e-52
Identity = 151/311 (48.55%), Postives = 183/311 (58.84%), Query Frame = 0


Query: 11  DSLVLSKMSAST----ELAHIPHF-HIPQPQTQSVNTAAAAAADHNI----------TIP 70
           DS  LSKM+  +    E   IPHF H+  PQ QS ++A   A  H++          ++P
Sbjct: 23  DSFALSKMNPCSWELEEAPQIPHFHHLLPPQIQS-SSAQQTAHHHHLPPRILPTTTNSLP 82

Query: 71  C------------------KRKNWPHAKCYNVRAKKPKTQNQNHKVSPPAPAPAPGYIHV 130
                              KR+ +  AK    R KK KTQ+       P  +P PGYIHV
Sbjct: 83  SSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR-KKLKTQDH------PQVSPPPGYIHV 142

Query: 131 RARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQV 190
           RARRGQATD HSLAER+RR+KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ+Q+
Sbjct: 143 RARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQI 202

Query: 191 EFLSMKLASVNPILYDFGMDNPEVFIGRPDSEPEILNGNGVVANSEEAELAYNMANSEEA 250
           E LSM+LASV+PI YDFGMDNPEVFIG P +  ++LNG+G+V+ SE+AELAYNMA+    
Sbjct: 203 ELLSMELASVHPIRYDFGMDNPEVFIGTPVT--QVLNGSGMVSRSEQAELAYNMASCNTF 262

Query: 251 ELAYNMANSEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGSFIPLDMIVSPSPFLLEHA 289
           +             A N                       GSFIP+DM  +PS   L++ 
Sbjct: 263 QATGGGGGDSPILTAEN-----------------------GSFIPVDM--NPSQVFLDY- 295

[Close]

BLAST of Spg007712.1 vs. ExPASy TrEMBL
Match: A0A5A7URF9 (Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00190 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 144/311 (46.30%), Postives = 175/311 (56.27%), Query Frame = 0


Query: 14  VLSKMSASTELAHIPHFHIPQPQTQSVNTAAA----------AAADHNITIPCKRKNWPH 73
           +L + + + +  H    H+  PQ QS   +++             DH+I +P    + P 
Sbjct: 10  LLEETAPNLQTPHNYDHHLLPPQIQSAPASSSNYQTPQHHHPLGPDHHIYMPSSHSHPPS 69

Query: 74  A----------------KCYNVRAKKPKTQNQNHKVS-PPAPAPAPGYIHVRARRGQATD 133
           A                +CYN RAK  +      K++      PA    HVRARRGQATD
Sbjct: 70  AEEEDQNGSKGGECKRRRCYN-RAKAGERSGCKKKMTIKTQHDPAD---HVRARRGQATD 129

Query: 134 SHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 193
           SHSLAER+RR+KISQRMKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 130 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLAS 189

Query: 194 VNPILYDFGMDNPEVFI-GRPDSEPEILNGNGVVANSEEAELAYNMANSEEAELAYNMAN 253
           ++P+LYDFGMD PEV I G P S  EILNGNG+V++SE+AELAYN               
Sbjct: 190 LHPVLYDFGMDFPEVLIVGTPAS--EILNGNGMVSHSEQAELAYN--------------- 249

Query: 254 SEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGS---FIPL-----DMIVSPSPFLLEHA 289
                               NMAP  +TFQ  GS     P+        ++PSP  ++H 
Sbjct: 250 --------------------NMAPIYNTFQATGSGGGGSPILTPGNSSFINPSPLFIDH- 276

[Close]

BLAST of Spg007712.1 vs. ExPASy TrEMBL
Match: A0A5D3BH45 (Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00220 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.2e-47
Identity = 143/311 (45.98%), Postives = 175/311 (56.27%), Query Frame = 0


Query: 14  VLSKMSASTELAHIPHFHIPQPQTQSVNTAAA----------AAADHNITIPCKRKNWPH 73
           +L + + + +  H    H+  PQ QS   +++             DH+I +P    + P 
Sbjct: 10  LLEETAPNLQTPHNYDHHLLPPQIQSAPASSSNYQTPQHHHPLGPDHHIYMPSSHSHPPS 69

Query: 74  A----------------KCYNVRAKKPKTQNQNHKVS-PPAPAPAPGYIHVRARRGQATD 133
           A                +CYN RAK  +      K++      PA    HVRARRGQATD
Sbjct: 70  AEEEDQNGSKGGECKRRRCYN-RAKAGERSGCKKKMTIKTQHDPAD---HVRARRGQATD 129

Query: 134 SHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 193
           SHSLAER+RR+KISQRMKVLQTLVPGCHKVTGKA MLDEIINYVQSLQNQVEFLSMKLAS
Sbjct: 130 SHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLAS 189

Query: 194 VNPILYDFGMDNPEVFI-GRPDSEPEILNGNGVVANSEEAELAYNMANSEEAELAYNMAN 253
           ++P+LYDFGMD PEV I G P S  EILNGNG+V++SE+AELA+N               
Sbjct: 190 LHPVLYDFGMDFPEVLIVGTPAS--EILNGNGMVSHSEQAELAHN--------------- 249

Query: 254 SEEAELAYNMAHPQQAELAYNMAPCNDTFQTRGS---FIPL-----DMIVSPSPFLLEHA 289
                               NMAP  +TFQ  GS     P+        ++PSP  ++H 
Sbjct: 250 --------------------NMAPIYNTFQATGSGGGGSPILTPGNSSFINPSPLFIDH- 276

[Close]

BLAST of Spg007712.1 vs. TAIR 10
Match: AT5G50915.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-37
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 69  VRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQT 128
           V  +K K Q +  K  PP       YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ 
Sbjct: 113 VEGRKSKKQKRGSKEEPPT-----DYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 172

Query: 129 LVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDS 188
           LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D   + +     
Sbjct: 173 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGLILQSEMG 231

Query: 189 EPEI 193
            PE+
Sbjct: 233 SPEV 231

[Close]

BLAST of Spg007712.1 vs. TAIR 10
Match: AT5G50915.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-37
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 69  VRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQT 128
           V  +K K Q +  K  PP       YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ 
Sbjct: 113 VEGRKSKKQKRGSKEEPPT-----DYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 172

Query: 129 LVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFIGRPDS 188
           LVPGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D   + +     
Sbjct: 173 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGLILQSEMG 231

Query: 189 EPEI 193
            PE+
Sbjct: 233 SPEV 231

[Close]

BLAST of Spg007712.1 vs. TAIR 10
Match: AT5G48560.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-34
Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 78  NQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVT 137
           N+++   P  P P   YIHVRARRGQATDSHSLAER+RREKI +RMK+LQ LVPGC+KVT
Sbjct: 284 NKSNNTKP--PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVT 343

Query: 138 GKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 178
           GKALMLDEIINYVQSLQ QVEFLSMKL+SVN    DF +D
Sbjct: 344 GKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381

[Close]

BLAST of Spg007712.1 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 90  PAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINY 149
           P   YIHVRARRGQATDSHSLAER+RREKIS+RMK+LQ LVPGC+KVTGKALMLDEIINY
Sbjct: 251 PYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 310

Query: 150 VQSLQNQVEFLSMKLASVNPILYDFGMD 178
           VQSLQ QVEFLSMKL+SVN  L DF MD
Sbjct: 311 VQSLQRQVEFLSMKLSSVNTRL-DFNMD 337

[Close]

BLAST of Spg007712.1 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-33
Identity = 77/110 (70.00%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 68  NVRAKKPKTQNQNHKVSPPAPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQ 127
           N   KK  +  Q  K S  +  P  GYIHVRARRGQAT+SHSLAER+RREKIS+RMK LQ
Sbjct: 276 NSPGKKSNSGKQQGKQS--SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 335

Query: 128 TLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 178
            LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + DF ++
Sbjct: 336 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382

The following BLAST results are available for this feature:

BLAST of Spg007712.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879024.1	1.2e-56	50.00	transcription factor bHLH137-like [Benincasa hispida]	[more]
XP_022987143.1	1.4e-52	49.21	transcription factor bHLH137-like [Cucurbita maxima]	[more]
XP_022921620.1	4.0e-52	48.75	transcription factor bHLH137-like isoform X2 [Cucurbita moschata]	[more]
XP_023516576.1	8.9e-52	48.90	transcription factor bHLH74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921619.1	2.0e-51	48.55	transcription factor bHLH74-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Spg007712.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W88	4.2e-36	63.71	Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=...	[more]
Q9FJL4	5.7e-33	74.00	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9SRT2	2.8e-32	84.09	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q9CAA9	6.3e-32	70.00	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q9C670	1.8e-31	69.31	Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1	[more]

BLAST of Spg007712.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIL6	6.7e-53	49.21	transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE...	[more]
A0A6J1E6B0	1.9e-52	48.75	transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1E106	9.6e-52	48.55	transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A5A7URF9	1.9e-47	46.30	Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3BH45	7.2e-47	45.98	Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Spg007712.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50915.1	3.0e-37	63.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.2	3.0e-37	63.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G48560.1	4.0e-34	74.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G07340.1	2.0e-33	84.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	4.4e-33	70.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 109..159 e-value: 3.6E-10 score: 49.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 107..154 e-value: 6.8E-7 score: 29.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 103..153 score: 15.446584
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 100..171 e-value: 8.2E-14 score: 53.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 101..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
None	No IPR available	PANTHER	PTHR12565:SF327	BHLH-TRANSCRIPTION FACTOR	coord: 68..212
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 93..177 e-value: 5.36264E-58 score: 178.79
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 68..212

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg007712	Spg007712	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007712.1-cds	Spg007712.1-cds-scaffold2:194519..194857	CDS
Spg007712.1-cds	Spg007712.1-cds-scaffold2:194965..195030	CDS
Spg007712.1-cds	Spg007712.1-cds-scaffold2:195129..195197	CDS
Spg007712.1-cds	Spg007712.1-cds-scaffold2:195316..195414	CDS
Spg007712.1-cds	Spg007712.1-cds-scaffold2:195506..195799	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg007712.1	Spg007712.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity