Spg007556.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg007556.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Kinetochore protein SPC25
Location	scaffold2: 1037680 .. 1040292 (-)
Sequence length	1086
RNA-Seq Expression	Spg007556.1
Synteny	Spg007556.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAGAATTTGAAGTTTGAAGCAAATTTGGCGGGCGGAGTGTAGGTGTACGAGCAACTCCTCTGCTCTGCAAAAGAATGGAGAACAAGGCGGAAGATTCTATTCGTGCGAAGATGGAGACACTTCGAATGGTTCGTGAAAAGGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCATTCGCCGATTCATTTTGCAAATCTCTGGAATCGACCATTGCGAAGTCCCGTGAAAATGCCCTAAGTCAAGGTGAGCCATCGTTTCTCTTCAATTTACTCGGGAAAGAATTCGATCGAAACCGCTATACTGTGACCTGTACAACGATGTAATCGGTAGTAGAAGTGTTTGTGAAGCCACCATTAGGGTTTTGGGATACTTAAGACTGAAAATGAATGTAACTCTCGGGGATTGAATAGGTGTAGATTGAGGAGCGGCAAAGTTTACTTTGAAATTTCTTGTTTCATCGTTAATTTTTTGAATTTTCAGGGAAACTTGGGGAACTAAAAGCGAGGCTGAGGGAGGCGGAAGATGAATTGGTTAAAGCTCTAGCAGGTATGAGTCATGACTATGCTACTTTTCTTTAACGCTGCGTGAGGTAGAATATACTACTTCGTTGAAGATTGAAATCGACTTGAAGCGGCATTTAAAAATTGAGTTATTTTTCAACTGAAATTGTTTAGAAACTTTTTGAACGTTAGTGTTTTGGATTTGGAGCAAGTGATGAGCGAAAGTTTGATGTTTGTGATGCTGGTATTATTTCATACTTTGCAATTAGCACACACAGTAAAGGATTATTACCTTTATACTTGCATATTTTTTTTAGTGAAGACACGTAAAGAGGCCAAACGCCTGGCAATCACGGACTCCCTGGCAGCTTCAAAATCTAGAATAGAAGAGCTCAGGAATACTTTACGAGATTGCAAAGGAAAGAGGGATGAATATTCTACCATTATATCTCAGCAATCCTTAGGTAAACTTAATTTATTTTCTAGTGCTCACTCTTAGGTCTGCTTTTGCTAGCCCTTAAATCCATTTAAACCCAATCTTCCTTCGTGCAAAATTGACGTGGATCAAAGATGAATTCATTGTTATAAAAAAATTGGATATGCTTTTTCTCAGCATTGTTCATTACTTTAGTGTGCTGAGTAGAAAATAATTTGATGTATCTTGTAGCCAGCAACAAAAATGCCTTGCTTCGAATTCAATAGCAATCTTTATTTACTTCATACCTGCGAGTTCTTACTTCAAATCCTTGCAAACTCCAAATTGAATATTTCATGCAAAAACTGATTACCTCTCCCTCTCTTTTCAATGCCATCAAAGGTTTATCTTCATCTGAACACAAGGAAACCCAAGAGAGTGATTGCAGAAATGAAATACAAGAGGCCATCTCTTGGTACAATAGAGTTCTTGATTTTCATATTGAAGGAGGACATGGTATGATAATTCAAGCTATTTTGTTTTTGAAAATCTTTTACATTTTCAGTGAAAGCTTGAGATTAATTTCTTGACTACTTCTTTCGGCATTTCAGGGGTAAAATTCTCTTTCAAGAAAATCAATGTAGACAATCCTGATAAAGAATATTCTTTTACCATTCGTCATGCAAATGATACTTATACATGTAAGTTATGGGCACTTGAAAAATGTTGATTTTTCATGCGCATTATCTTCTCAGTTCTGACAGCCCTTGTTTTTTCTTTCTCAACACTTTAGTGTTAGATTGTTCCCCATCCTTGCGAGATATTAAAGAGTTGATACATGAATTGAATAAAACAAACGGTTTATTCAAGTTGGTTAGGATTATGAGACGGAGGTTCCAAGAGGCCGCAGCAGAAGGTACGCATTTGATTTTTAACTTTTTGCTTGAAAGGCAATTCACTGCACAGAAAATTCATTGGTAGTTAATATGCATACGACCTGAACCACCTTTTGTTGTGCTTGTTGAAGTTTGTTAGGTTGAATTTGTTCTGCATTAATTGTTTGTTTTATTTTTGTTATTTTCCAGAAGTTGGAGCCCAAGCGTTGTCTCTGCATCAAGACTCAACAATGATCTCTTTGTCAGCTCCAGGTTTGTCATCATCAACTGACAGAAGCGAATCTTCAACTCAAGAAATTGATAACCAGGTTCAACCCCAGGAAACTAACAAACTTTCTAAGAAAATTTTACCTGGAAAGAAACCAGCTATCCAATCCCCTGGATCTGCCTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTATATTCAAGTTAATGTTTGGTATCTGCTGCTTATGAGTTTGGATTCTTTGGAATATGATATTAAGAGAACACTTTAACTTCTATGCATAACAAGTTGTTTCATTTTTTTTTGTTTTATGCACATTACGAAATTTTTTTTATTTAAGAGATAATTTCTAACAAAATGCATCACTAATGGCAGGTCAAGAAATAAGGTTGGAGGCTACTAATGATTGAATATGCACTTAATTGATGGGCCTAGCCTTGCTTCATGACATGCTTTGCTTTGCAATTGACATTTTATTATGGGGTACTATCTCAACATTTGCCAGAACTTCTCTGACCACTGTGAAGGCTCCATATTTGAAAACTGAAGTTGAAGAAGACATGATCGTGTGA

mRNA sequence

ATGGAGAACAAGGCGGAAGATTCTATTCGTGCGAAGATGGAGACACTTCGAATGGTTCGTGAAAAGGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCATTCGCCGATTCATTTTGCAAATCTCTGGAATCGACCATTGCGAAGTCCCGTGAAAATGCCCTAAGTCAAGGGAAACTTGGGGAACTAAAAGCGAGGCTGAGGGAGGCGGAAGATGAATTGGTTAAAGCTCTAGCAGTGAAGACACGTAAAGAGGCCAAACGCCTGGCAATCACGGACTCCCTGGCAGCTTCAAAATCTAGAATAGAAGAGCTCAGGAATACTTTACGAGATTGCAAAGGAAAGAGGGATGAATATTCTACCATTATATCTCAGCAATCCTTAGGTTTATCTTCATCTGAACACAAGGAAACCCAAGAGAGTGATTGCAGAAATGAAATACAAGAGGCCATCTCTTGGTACAATAGAGTTCTTGATTTTCATATTGAAGGAGGACATGGGGTAAAATTCTCTTTCAAGAAAATCAATGTAGACAATCCTGATAAAGAATATTCTTTTACCATTCGTCATGCAAATGATACTTATACATTGTTAGATTGTTCCCCATCCTTGCGAGATATTAAAGAGTTGATACATGAATTGAATAAAACAAACGGTTTATTCAAGTTGGTTAGGATTATGAGACGGAGGTTCCAAGAGGCCGCAGCAGAAGAAGTTGGAGCCCAAGCGTTGTCTCTGCATCAAGACTCAACAATGATCTCTTTGTCAGCTCCAGGTTTGTCATCATCAACTGACAGAAGCGAATCTTCAACTCAAGAAATTGATAACCAGGTTCAACCCCAGGAAACTAACAAACTTTCTAAGAAAATTTTACCTGGAAAGAAACCAGCTATCCAATCCCCTGGATCTGCCTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTATATTCAACCTTGCTTCATGACATGCTTTGCTTTGCAATTGACATTTTATTATGGGGTACTATCTCAACATTTGCCAGAACTTCTCTGACCACTGTGAAGGCTCCATATTTGAAAACTGAAGTTGAAGAAGACATGATCGTGTGA

Coding sequence (CDS)

ATGGAGAACAAGGCGGAAGATTCTATTCGTGCGAAGATGGAGACACTTCGAATGGTTCGTGAAAAGGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCATTCGCCGATTCATTTTGCAAATCTCTGGAATCGACCATTGCGAAGTCCCGTGAAAATGCCCTAAGTCAAGGGAAACTTGGGGAACTAAAAGCGAGGCTGAGGGAGGCGGAAGATGAATTGGTTAAAGCTCTAGCAGTGAAGACACGTAAAGAGGCCAAACGCCTGGCAATCACGGACTCCCTGGCAGCTTCAAAATCTAGAATAGAAGAGCTCAGGAATACTTTACGAGATTGCAAAGGAAAGAGGGATGAATATTCTACCATTATATCTCAGCAATCCTTAGGTTTATCTTCATCTGAACACAAGGAAACCCAAGAGAGTGATTGCAGAAATGAAATACAAGAGGCCATCTCTTGGTACAATAGAGTTCTTGATTTTCATATTGAAGGAGGACATGGGGTAAAATTCTCTTTCAAGAAAATCAATGTAGACAATCCTGATAAAGAATATTCTTTTACCATTCGTCATGCAAATGATACTTATACATTGTTAGATTGTTCCCCATCCTTGCGAGATATTAAAGAGTTGATACATGAATTGAATAAAACAAACGGTTTATTCAAGTTGGTTAGGATTATGAGACGGAGGTTCCAAGAGGCCGCAGCAGAAGAAGTTGGAGCCCAAGCGTTGTCTCTGCATCAAGACTCAACAATGATCTCTTTGTCAGCTCCAGGTTTGTCATCATCAACTGACAGAAGCGAATCTTCAACTCAAGAAATTGATAACCAGGTTCAACCCCAGGAAACTAACAAACTTTCTAAGAAAATTTTACCTGGAAAGAAACCAGCTATCCAATCCCCTGGATCTGCCTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTATATTCAACCTTGCTTCATGACATGCTTTGCTTTGCAATTGACATTTTATTATGGGGTACTATCTCAACATTTGCCAGAACTTCTCTGACCACTGTGAAGGCTCCATATTTGAAAACTGAAGTTGAAGAAGACATGATCGTGTGA

Protein sequence

MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLGELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYSTIISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPDKEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGAQALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSPGSAFSLRRSPRFKVYSTLLHDMLCFAIDILLWGTISTFARTSLTTVKAPYLKTEVEEDMIV

Homology

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BLAST of Spg007556.1 vs. NCBI nr
Match: XP_022134671.1 (uncharacterized protein LOC111006883 [Momordica charantia])

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143
Identity = 279/314 (88.85%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIR KME+LRMVREKEIPVQQQKMESFADSF KSLES   +SRENALSQGKLG
Sbjct: 1   MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTL+DCK KRDEYST
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+EIQEAISWYNRVLDFHIEGG GVKFSFKKIN++ PD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHA+DTYTLLDC+PSL+DI++LIHELNKTNGLFK VR+MR+RFQE AAE VGA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           QALSLHQDST+IS+SAPGLSSSTDRSESSTQEIDNQV+ +ETNK SKKIL GKKPA+ SP
Sbjct: 241 QALSLHQDSTIISVSAPGLSSSTDRSESSTQEIDNQVRLEETNKHSKKILSGKKPAVLSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRFKV
Sbjct: 301 GSAFSLRRSPRFKV 314

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BLAST of Spg007556.1 vs. NCBI nr
Match: KAG7021439.1 (FKBP12-interacting protein of 37 kDa [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508.4 bits (1308), Expect = 4.9e-140
Identity = 273/313 (87.22%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFADSF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFADSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIKELIHELNKTNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKELIHELNKTNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +AL LHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALYLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFK 314
           GSAFSLRRSPRF+
Sbjct: 301 GSAFSLRRSPRFQ 313

[Close]

BLAST of Spg007556.1 vs. NCBI nr
Match: KAG6587456.1 (Kinetochore protein SPC25-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 508.4 bits (1308), Expect = 4.9e-140
Identity = 273/313 (87.22%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFADSF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFADSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIKELIHELNKTNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKELIHELNKTNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +AL LHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALYLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFK 314
           GSAFSLRRSPRF+
Sbjct: 301 GSAFSLRRSPRFQ 313

[Close]

BLAST of Spg007556.1 vs. NCBI nr
Match: XP_023006028.1 (uncharacterized protein LOC111498903 [Cucurbita maxima])

HSP 1 Score: 508.1 bits (1307), Expect = 6.4e-140
Identity = 273/314 (86.94%), Postives = 290/314 (92.36%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFADSF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFADSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIK LIHELN+TNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKGLIHELNETNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +ALSLHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALSLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRF+V
Sbjct: 301 GSAFSLRRSPRFQV 314

[Close]

BLAST of Spg007556.1 vs. NCBI nr
Match: XP_022929488.1 (uncharacterized protein LOC111436038 [Cucurbita moschata])

HSP 1 Score: 506.5 bits (1303), Expect = 1.9e-139
Identity = 273/314 (86.94%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFA SF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFAVSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIKELIHELNKTNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKELIHELNKTNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +AL LHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALYLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRF+V
Sbjct: 301 GSAFSLRRSPRFQV 314

[Close]

BLAST of Spg007556.1 vs. ExPASy Swiss-Prot
Match: Q93VK9 (Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.0e-57
Identity = 136/308 (44.16%), Postives = 199/308 (64.61%), Query Frame = 0


Query: 7   DSIRAKMETLRMVREKEIPVQQQKMESF-ADSFCKSLESTIAKSRENALSQGKLGELKAR 66
           D+ +  M +L ++ EK+I  Q+ K++SF A  F +S+ S + +++  A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYSTIISQQ 126
           LREAEDELVK LAVKTRKEA+++ I DS++A++SRIE LR  L+  K K+D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

Query: 127 SLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPDKEYSF 186
              LS S+    + ++ + +I EAISWYN  L FH+E GHGVKF+F  I+   P +E+SF
Sbjct: 131 LQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTREFSF 190

Query: 187 TIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGAQALSL 246
           T+ + ND YTLLD    L  I E++ ELNKTN LF+ VR+MR +F ++   E+   +  L
Sbjct: 191 TVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTHSGQL 250

Query: 247 HQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSPGSAFS 306
            Q+++ IS SAP +S STD + S+ +   ++VQ    N+  K+   G +  + +P S  +
Sbjct: 251 QQETSAISASAPAISFSTDTNMSTPENKRSKVQ---VNRRQKR---GSESPLLAPVSTSA 310

Query: 307 LRRSPRFK 314
            RRS RFK
Sbjct: 311 TRRSSRFK 312

[Close]

BLAST of Spg007556.1 vs. ExPASy Swiss-Prot
Match: Q10430 (Kinetochore protein spc25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spc25 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.4e-06
Identity = 53/229 (23.14%), Postives = 114/229 (49.78%), Query Frame = 0


Query: 7   DSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLGELKARL 66
           DS+++K+     + ++ +  +++K+ +  + + + L S I ++++ A  +  L + +AR 
Sbjct: 14  DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYLRQL-SEINEAQKKA--EKSLEQTEARK 73

Query: 67  REAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYSTII-SQQ 126
           +   + L K    +   E +  +  + L A   R ++L   L       D Y  II S++
Sbjct: 74  QNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL-------DHYRAIISSKR 133

Query: 127 SLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHG--VKFSFKKINVDNPDKEY 186
            L     E K  Q+S    E++    ++   L   +EG H   ++F F  I+  + +K++
Sbjct: 134 ELRAQEMEAKRKQDSYNNPELK----FWEDYLGLKMEGVHDEVIRFIFTNIDEKDWNKQF 193

Query: 187 SFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQE 233
           SF I  A   Y ++ C P L  + +L++++N+T   ++ ++ MR+ F+E
Sbjct: 194 SFQINLAERDYKVVHCHPPLPHVDDLVNKVNRTRDFYQFLKDMRKGFRE 228

[Close]

BLAST of Spg007556.1 vs. ExPASy TrEMBL
Match: A0A6J1BYG5 (Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.0e-144
Identity = 279/314 (88.85%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIR KME+LRMVREKEIPVQQQKMESFADSF KSLES   +SRENALSQGKLG
Sbjct: 1   MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTL+DCK KRDEYST
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+EIQEAISWYNRVLDFHIEGG GVKFSFKKIN++ PD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHA+DTYTLLDC+PSL+DI++LIHELNKTNGLFK VR+MR+RFQE AAE VGA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           QALSLHQDST+IS+SAPGLSSSTDRSESSTQEIDNQV+ +ETNK SKKIL GKKPA+ SP
Sbjct: 241 QALSLHQDSTIISVSAPGLSSSTDRSESSTQEIDNQVRLEETNKHSKKILSGKKPAVLSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRFKV
Sbjct: 301 GSAFSLRRSPRFKV 314

[Close]

BLAST of Spg007556.1 vs. ExPASy TrEMBL
Match: A0A6J1L3T3 (Kinetochore protein SPC25 OS=Cucurbita maxima OX=3661 GN=LOC111498903 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.1e-140
Identity = 273/314 (86.94%), Postives = 290/314 (92.36%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFADSF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFADSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIK LIHELN+TNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKGLIHELNETNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +ALSLHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALSLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRF+V
Sbjct: 301 GSAFSLRRSPRFQV 314

[Close]

BLAST of Spg007556.1 vs. ExPASy TrEMBL
Match: A0A6J1ES93 (Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111436038 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 9.0e-140
Identity = 273/314 (86.94%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENK EDSIRAKME+LRMVREKEIP Q +KMESFA SF KSLES  AKS+ENALSQ KLG
Sbjct: 1   MENKVEDSIRAKMESLRMVREKEIPFQLEKMESFAVSFRKSLESISAKSQENALSQVKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAAS+SRIE+LRNTL+DCK KRD+YS 
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASRSRIEKLRNTLQDCKAKRDKYSN 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
           IISQQSL LSSSEHKETQESDCR+++QEAISWYNRVL FHIEGGHGV FSFKKI  DNPD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSDLQEAISWYNRVLGFHIEGGHGVTFSFKKIIKDNPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSLRDIKELIHELNKTNGLFK V++MRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCTPSLRDIKELIHELNKTNGLFKFVKVMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           +AL LHQDSTMISLSAPGLSSSTD SESSTQEIDN VQP+ETN  SKK LPG KP IQSP
Sbjct: 241 EALYLHQDSTMISLSAPGLSSSTDGSESSTQEIDNHVQPEETNNRSKKFLPGNKPGIQSP 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRRSPRF+V
Sbjct: 301 GSAFSLRRSPRFQV 314

[Close]

BLAST of Spg007556.1 vs. ExPASy TrEMBL
Match: A0A6J1E461 (Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111429767 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.0e-135
Identity = 265/314 (84.39%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENKAE+S+ A+ME+LR+VREKEI V+QQKMESFADSF KSLES  A+SRENA SQGKLG
Sbjct: 1   MENKAEESVCARMESLRIVREKEIAVEQQKMESFADSFRKSLESITARSRENARSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLA+TDSLA SKSRIEELRN  +DCK +RDEYST
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLALTDSLATSKSRIEELRNNFQDCKARRDEYST 120

Query: 121 IISQQSLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPD 180
            IS+QSL LS  EHKE QESDCRNEIQEAISWYNRVLDFHIEGGHGV FSFKKINVD+PD
Sbjct: 121 TISRQSLALSPYEHKEPQESDCRNEIQEAISWYNRVLDFHIEGGHGVNFSFKKINVDDPD 180

Query: 181 KEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGA 240
           KEYSFTIRHANDTYTLLDC+PSL+ I+ELIHELN TNGLFK VRIMRRRFQEAAAE VGA
Sbjct: 181 KEYSFTIRHANDTYTLLDCNPSLQGIEELIHELNNTNGLFKFVRIMRRRFQEAAAEGVGA 240

Query: 241 QALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSP 300
           QALSLHQ ST+IS+SAPGL+SS DRSESST+EIDNQVQ +ETNK SKK   GKKPAIQS 
Sbjct: 241 QALSLHQGSTIISMSAPGLTSSLDRSESSTEEIDNQVQLEETNKPSKKTSSGKKPAIQSI 300

Query: 301 GSAFSLRRSPRFKV 315
           GSAFSLRR+PRFKV
Sbjct: 301 GSAFSLRRTPRFKV 314

[Close]

BLAST of Spg007556.1 vs. ExPASy TrEMBL
Match: A0A6J1E0R4 (Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111429767 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 7.4e-134
Identity = 265/315 (84.13%), Postives = 286/315 (90.79%), Query Frame = 0


Query: 1   MENKAEDSIRAKMETLRMVREKEIPVQQQKMESFADSFCKSLESTIAKSRENALSQGKLG 60
           MENKAE+S+ A+ME+LR+VREKEI V+QQKMESFADSF KSLES  A+SRENA SQGKLG
Sbjct: 1   MENKAEESVCARMESLRIVREKEIAVEQQKMESFADSFRKSLESITARSRENARSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYST 120
           ELKARLREAEDELVKALAVKTRKEAKRLA+TDSLA SKSRIEELRN  +DCK +RDEYST
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLALTDSLATSKSRIEELRNNFQDCKARRDEYST 120

Query: 121 IISQQSL-GLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNP 180
            IS+QSL  LS  EHKE QESDCRNEIQEAISWYNRVLDFHIEGGHGV FSFKKINVD+P
Sbjct: 121 TISRQSLEALSPYEHKEPQESDCRNEIQEAISWYNRVLDFHIEGGHGVNFSFKKINVDDP 180

Query: 181 DKEYSFTIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVG 240
           DKEYSFTIRHANDTYTLLDC+PSL+ I+ELIHELN TNGLFK VRIMRRRFQEAAAE VG
Sbjct: 181 DKEYSFTIRHANDTYTLLDCNPSLQGIEELIHELNNTNGLFKFVRIMRRRFQEAAAEGVG 240

Query: 241 AQALSLHQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQS 300
           AQALSLHQ ST+IS+SAPGL+SS DRSESST+EIDNQVQ +ETNK SKK   GKKPAIQS
Sbjct: 241 AQALSLHQGSTIISMSAPGLTSSLDRSESSTEEIDNQVQLEETNKPSKKTSSGKKPAIQS 300

Query: 301 PGSAFSLRRSPRFKV 315
            GSAFSLRR+PRFKV
Sbjct: 301 IGSAFSLRRTPRFKV 315

[Close]

BLAST of Spg007556.1 vs. TAIR 10
Match: AT3G48210.1 (CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 222.6 bits (566), Expect = 5.0e-58
Identity = 136/308 (44.16%), Postives = 199/308 (64.61%), Query Frame = 0


Query: 7   DSIRAKMETLRMVREKEIPVQQQKMESF-ADSFCKSLESTIAKSRENALSQGKLGELKAR 66
           D+ +  M +L ++ EK+I  Q+ K++SF A  F +S+ S + +++  A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLRDCKGKRDEYSTIISQQ 126
           LREAEDELVK LAVKTRKEA+++ I DS++A++SRIE LR  L+  K K+D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

Query: 127 SLGLSSSEHKETQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDNPDKEYSF 186
              LS S+    + ++ + +I EAISWYN  L FH+E GHGVKF+F  I+   P +E+SF
Sbjct: 131 LQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTREFSF 190

Query: 187 TIRHANDTYTLLDCSPSLRDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEEVGAQALSL 246
           T+ + ND YTLLD    L  I E++ ELNKTN LF+ VR+MR +F ++   E+   +  L
Sbjct: 191 TVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTHSGQL 250

Query: 247 HQDSTMISLSAPGLSSSTDRSESSTQEIDNQVQPQETNKLSKKILPGKKPAIQSPGSAFS 306
            Q+++ IS SAP +S STD + S+ +   ++VQ    N+  K+   G +  + +P S  +
Sbjct: 251 QQETSAISASAPAISFSTDTNMSTPENKRSKVQ---VNRRQKR---GSESPLLAPVSTSA 310

Query: 307 LRRSPRFK 314
            RRS RFK
Sbjct: 311 TRRSSRFK 312

The following BLAST results are available for this feature:

BLAST of Spg007556.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134671.1	1.2e-143	88.85	uncharacterized protein LOC111006883 [Momordica charantia]	[more]
KAG7021439.1	4.9e-140	87.22	FKBP12-interacting protein of 37 kDa [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6587456.1	4.9e-140	87.22	Kinetochore protein SPC25-like protein, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023006028.1	6.4e-140	86.94	uncharacterized protein LOC111498903 [Cucurbita maxima]	[more]
XP_022929488.1	1.9e-139	86.94	uncharacterized protein LOC111436038 [Cucurbita moschata]	[more]

BLAST of Spg007556.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VK9	7.0e-57	44.16	Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 ...	[more]
Q10430	7.4e-06	23.14	Kinetochore protein spc25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]

BLAST of Spg007556.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYG5	6.0e-144	88.85	Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV...	[more]
A0A6J1L3T3	3.1e-140	86.94	Kinetochore protein SPC25 OS=Cucurbita maxima OX=3661 GN=LOC111498903 PE=3 SV=1	[more]
A0A6J1ES93	9.0e-140	86.94	Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111436038 PE=3 SV=...	[more]
A0A6J1E461	3.0e-135	84.39	Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111429767 PE=3 SV=...	[more]
A0A6J1E0R4	7.4e-134	84.13	Kinetochore protein SPC25 OS=Cucurbita moschata OX=3662 GN=LOC111429767 PE=3 SV=...	[more]

BLAST of Spg007556.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48210.1	5.0e-58	44.16	CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:I...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..86
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	GENE3D	3.30.457.50	Chromosome segregation protein Spc25	coord: 138..237 e-value: 1.4E-25 score: 91.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..303
None	No IPR available	PANTHER	PTHR14281:SF3	SUBFAMILY NOT NAMED	coord: 1..314
IPR013255	Chromosome segregation protein Spc25, C-terminal	PFAM	PF08234	Spindle_Spc25	coord: 163..231 e-value: 8.0E-22 score: 77.3
IPR045143	Kinetochore protein Spc25	PANTHER	PTHR14281	KINETOCHORE PROTEIN SPC25-RELATED	coord: 1..314

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg007556	Spg007556	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1037680..1037816	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1038050..1038289	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1038459..1038581	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1038674..1038763	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1038859..1038972	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1039326..1039472	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1039744..1039809	CDS
Spg007556.1-cds	Spg007556.1-cds-scaffold2:1040047..1040215	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007556.1-five_prime_utr	Spg007556.1-five_prime_utr-scaffold2:1040216..1040292	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg007556.1	Spg007556.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
cellular_component	GO:0031262	Ndc80 complex
cellular_component	GO:0005634	nucleus