Spg007365.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg007365.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold7: 19290500 .. 19291665 (-)
Sequence length234
RNA-Seq ExpressionSpg007365.1
SyntenySpg007365.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGAAAAAAGAAGAAAGAAAATTCTTAAACAAGACAAAAAGGAGATAACAAAGAAAATGGCCAAGAAAATGATGGCAACATTGCTATTATGCATTATTGTGGTGGTGGCGACACTACAATTCTCTGTAGCAAACGATGCGGCCGACATCGAGGCTAAATTTAGGATGGTGGTCGATGCCTTTCCCTGCTTGAAAGAATGCGCCGGACAATGTAAAGCCAAAGGCATTAAGACCGCTGAGGATTGTATGGCATCATGCAAACATTGTGACAAGGAACTGCATGGTATGTCTTATGCTTTCCACACAAAAAAGTTACATTAAAAAAATTCATGTTAAGATGTATCAGTTTTTATCATACACTTTTCATCCACCAAAAAATTCATTAAATTAAAAAATGTATATGGAATGGATTGATTTCTTTTTTTTTTTCTTGCTAAAGTTATGAAGTTATCGGGGATTTAAAAAAAAAATTGTGAATCGTGGTAGAGTTATTCAATAGTTGATTTTGTGTATGGTGAAGTTTAATTTTATTCTAAACTTGAGTTTTGTAATTTATTTGGTGAAATTTTGAAGTCTTTTACATCGTTTTTCTTATTGAAAAATAGATTAGATCGATGAAATTGATAATTTGCCATGAAACTTATACCCAGATTTATTGTAATTGTTTTTCCTTTTTATTTTGTCTTATTTTGTTTTATATTTTTGCATTAATGTTAATATTATTTTTGTTGACTTTGCAGGGAAATAGAACATTGATCTAATCTGATTCGTTCATAATTGAGTATGGAATGACTGAATAGCTCTAAATATTGATCGGTTAGATCTAGAAGATTAAGATTTATTTGAATAACATTTGTGTGAGGAAAATTTGAACTTCCTTTATATCCTCATTCATTTTTACCATGTAATTTATTTGTTTCGTAATAAAATATTTGTTTTGGAATCATTTGATTATTATTCTCACCCAAAAAAATTTAATTGATTTAAGGTTTATATTCACAAAATTGTTTTTTTTTTTTTATTTCTATATTCAATTAACAATCCCAATGTAAAAATTATGAATAACAAATAAGATCTTATAGTTAAGGAAGATAAATATTTGTCGTTATATTGATTTGTCATTAAATCAAAAGGTTCAACATCAATATTAAGAATTTTTTTTT

mRNA sequence

ATGGCCAAGAAAATGATGGCAACATTGCTATTATGCATTATTGTGGTGGTGGCGACACTACAATTCTCTGTAGCAAACGATGCGGCCGACATCGAGGCTAAATTTAGGATGGTGGTCGATGCCTTTCCCTGCTTGAAAGAATGCGCCGGACAATGTAAAGCCAAAGGCATTAAGACCGCTGAGGATTGTATGGCATCATGCAAACATTGTGACAAGGAACTGCATGGGAAATAG

Coding sequence (CDS)

ATGGCCAAGAAAATGATGGCAACATTGCTATTATGCATTATTGTGGTGGTGGCGACACTACAATTCTCTGTAGCAAACGATGCGGCCGACATCGAGGCTAAATTTAGGATGGTGGTCGATGCCTTTCCCTGCTTGAAAGAATGCGCCGGACAATGTAAAGCCAAAGGCATTAAGACCGCTGAGGATTGTATGGCATCATGCAAACATTGTGACAAGGAACTGCATGGGAAATAG

Protein sequence

MAKKMMATLLLCIIVVVATLQFSVANDAADIEAKFRMVVDAFPCLKECAGQCKAKGIKTAEDCMASCKHCDKELHGK
Homology
The following BLAST results are available for this feature:
BLAST of Spg007365.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg007365.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg007365.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg007365.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg007365Spg007365gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg007365.1-three_prime_utrSpg007365.1-three_prime_utr-scaffold7:19290500..19290914three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg007365.1-cdsSpg007365.1-cds-scaffold7:19290915..19290922CDS
Spg007365.1-cdsSpg007365.1-cds-scaffold7:19291380..19291605CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg007365.1-five_prime_utrSpg007365.1-five_prime_utr-scaffold7:19291606..19291665five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg007365.1Spg007365.1-proteinpolypeptide