Spg007011.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg007011.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	FAM192A_Fyv6_N domain-containing protein
Location	scaffold10: 39884172 .. 39888306 (+)
Sequence length	798
RNA-Seq Expression	Spg007011.1
Synteny	Spg007011.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAAAGTCGAGTCGAGAGTGGCAAACAAGAACGTTATGTGGAAGTGACTTTGTAAATTTGGAATCCCTTTCTTTTTTTGGTGAAATTTTCAAGTGTTTGAAGAGTTTGAAGTGAAGGAAAAGCGAGAATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGGTTCTTTTTCTTCCCATCCTTTCCTTTGATTGATTCATACTATAAGAATTTTGGGGTTCTTTTTCTTTTTTTGAAATTAATGCAAATATATTGGTTTTTGCAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGGTTCTTCAATGTTTATTCACTTTTACAGCCTGAATGTAAATTCTGTTAGTGGAATGAAAAGGAAATATCTGCTCAGGCCATTTCATTTATACCCTTATGTACAGTATTGTAAAAGTATGTGAGTTGACCTATTTCAGCTTAGCAAGTGGTGGGAGATCTTATAAGAAAAAATAAGGTCCTTGAAATTTGTTTGTTTTTAGTATGTCTCTAAACTGTAAAAAGGTATAATAAGCACTAAACTTTCTGTTTTGTGTCTAATATGTACCTAAACTTTAGAAGTGTCTAATAGATCATGAACTTTCGATTTTGTTTCTAACAGGTGCTTAGCATATTTTATACTTTTAAAAATGAATGGGCCTATTATACATAAAATTGAATTTTGTATCTAATAGAACCTTAAACTTTCAATTTCATATCTAATAAGTCTGTAGATTTTTTAAAATGTCGAAATGGCAATGACCTATTGAACACAAATTGAGAGTTTAGGGACTTGTTGGACACAAAATTGTAAATTTGTAATTTAGCAAATCACAAATCATTACCACAATGTATATGTCTGCAGGGTGTCATTCCAAACATTTGAGAACCAGTGGCTTGAGAGGCATTTGTTATTTACAGCTCTGATGCCAAATGAAACTTAGATTTTTGGCTTGAGAGGCTTGGAGTGTCCCCTTAACAGTGGGATTTTTGCATTTCATTGTTACTTAATACCCAAATAAATCGAGTAATTAAGAGAAGTAACATTAAGTTGTTGAGATAGAATTATGGATCATTGATAGTTGGTTGAGTTTTTTAACTAAGAGAAGTCCATCTATGAAATTGAATTGGAAATATTTCTTAGTTTATAACTTTATACAGATTGCCATTGAGCCTTATCACCTTATGTCTTTATTCTGTGTGAATGATATATTTTACTGGACAGTAGTCACTTTCTCTTTTATGTTGTAAACTTTTTAGTGACCATATGATATCAAATAACAATTTTTTATGACTTATTTAAAACTATATTGTTAATATCCAATTCTCCAGTTGTTTTGGTGGCATATATCTTTGTAAGGCCTGTTTTTGTAATCTTTCACTCTTCTCAATGAAGGTAGTTTTATTTATATGTATGTATTCCATGTACGAGCATTTGAGTGCATAGATTTGAACATTTTTGTTGTTAACTACATTTCTCTTTTCTGTTTGCAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGTGAGTGCTGAAGTGTAATATCAATCTTGTTCTTGATGATAACTCATATAATTGTTATTATTTCAATATTTAGTATAGATCCAATAAATGTTGCCAGATGGCACAAATGATCAAAGATACAGGATTACATCCATGCCTATCATGCAACGATTAAGATTCATGCTTATTCAGCTCTTTTACTACAGGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGGTGAGACTATTTTTTTTTAACTTTTTACCCATAAGCATTGCATTGAAATTTGTTAATTAATTCAATATTGAGTATCCAAATCAGGTTTAGTATTTAACACAAGATTGTAAATTTTTTCTTCTCTTTTCTGGGAATTTTATCGTTGATTGTCATGCAGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGTAATTATCCTTATGGTCCACTGTAAACTTTCTATTACTTGTTTTTCTTTTTCAAATCACTGATATATTGTTCAATAGGGTGAAATTTACAATATAACTTTGAACAAGTGTTTTTCAATCAACTGTAATTTCACATGCTCTTAAGTGTGGGGTGGGTGGGGTATTCAGTATGTTGTGCTATATCAAGTCTAGTGGTAATGGCAATCTGTAACCCTTGAACCTTGATTAATGCACTATTCTGAAAACCCTGAAAAACATGTGCCTAAAAGGAGCATGGAAATGAAACAAAAGACAAAGATGTCGAGGGCTATTAGTCTAATGACAAGAAAAATGAGGATGAGGACATATTTAGTATTTAGTGTTGAGTTATAATTTTAAGTGTTTGCATGACTGTTTACTCTTTGTTGTTAAGAGATCCATAATACTTGGATTTTGTTTGTATTTCTATATTTCTTATATCTCATGTACTGTTTCTTTTATCTTGTTTGCTTCAACTCACTGAAATCATCACTTCTTATTGGTGCATTACACTTGAGCTTCAGAGCGTTGTTGCACATCAATGCACTTCGTGTTTAAAGAACATCGGAACAATGTAACAATTTATTAAATGTTTGTATAGTAGTGGCAACAGCTGAACCATGATCTTACTCTAGAGTCTAGATATATTACTGCAGAAGAGATCATCATTGTAGCATCTGAGTTTATTAGTCATCTCTAGCATTGATATAGCTCCAGATTAACAAGCACTGAAAAAATGATGGCTGTTCTTCAGTGGGTTTAGGGTCATGAAGGAAGTCCACATCAAGTGGAACAAGTTACCAATTCAAGTGCCAGTGTTTCCCTTGTAAGTGATTAGATGCAGCAGCATCAAGAATGTTGCTTGTAGCCTCAGTGTTGGTTATGGAGATTTCCTGTGACTCTTTATACTTCAATTATTTATCACGATGAGACAGTCTTTTTTTGCAACAATTTGTTAATAACTGATGAAAGTTGCAGAAAAATGGACATCTACCTGTAGGAACAGTAGGAACATTTTTCTTACCAATATAAATAATCAATTTGCACGCTTGTAATTCTGTTTTAGGTTGCCTGTTGCTTTCTGCTTAGTGATATTACTTGTTCACAATGTACATGAATACTACACGCAAGTGCCCACTTTTGAGTTTCTTCTCAAGCACTGTTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCCCCGGCTCCAGCAGCTCAGGTTGGTTTAGTTCAAATTCTACGCGCTTCCGGTAACTTTTGGTGCGGGTAGCCACATCATGAACGATCAATCTATAATTCCGGTACTGAAATGCATTACTATTGACAAAAAGACATCACAGATTCCTACATTATTTGGTGTTTTGTTGGAATGTGAAGTGTGCTAAGTGGTGCCTAGCTTGTGTCTCACATGATTTCTATCTAATGTATTTGTACATACAAGGGTGTGAGTACATTCATCGTCGTCACGGTCTGTTCTGTTCTTTTTGGTCGAGACCTGATCGAGCTGCTGTAATGAAGTTTCTGTTATATCAATGGCCACCTGATGTGGACCCTCAACTGTTTGCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCGCAGGCGAAGAAAGCAAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGATGCTAAAGCAGAGGAGCCTTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAGCGAGTCGATTTGGCTGTTAGAATTTCAGAAACAATCACCATATTGTATTCAATTTTTTGTGCTGAGGTTCTGAAGCAATGAATCCTTTTTTGTTAGCTTGATTTATATATATACATGTTCTAACCGTTCATTGTTAAAATGTTTTAAACAAGCCTCAAACTGTGCTTGTGATAATTTAGGATGC

mRNA sequence

ATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGGTCATGAAGGAAGTCCACATCAAGTGGAACAAGTTACCAATTCAAGTGCCAGTGTTTCCCTTGTAATGATATTACTTGTTCACAATGTACATGAATACTACACGCAAGTGCCCACTTTTGAGTTTCTTCTCAAGCACTGTTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCCCCGGCTCCAGCAGCTCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCGCAGGCGAAGAAAGCAAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGATGCTAAAGCAGAGGAGCCTTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG

Coding sequence (CDS)

ATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGGTCATGAAGGAAGTCCACATCAAGTGGAACAAGTTACCAATTCAAGTGCCAGTGTTTCCCTTGTAATGATATTACTTGTTCACAATGTACATGAATACTACACGCAAGTGCCCACTTTTGAGTTTCTTCTCAAGCACTGTTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCCCCGGCTCCAGCAGCTCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCGCAGGCGAAGAAAGCAAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGATGCTAAAGCAGAGGAGCCTTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG

Protein sequence

MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSASVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTADTVSDRPLEAVATGLVSYSDESEDED

Homology

[Close]

BLAST of Spg007011.1 vs. NCBI nr
Match: XP_023549588.1 (protein FAM192A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-83
Identity = 189/266 (71.05%), Postives = 203/266 (76.32%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+L+E++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLSEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKAPVR+ETPVTRPPSMII+VKPQAKKARIEPRSPE+AG +A++P+AKAEE SES +T D
Sbjct: 181 EKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEIPNAKAEEDSESVRTHD 213

Query: 241 TVSDRPLEAVAT-GLVSYSDESEDED 266
           T SDRPLEA  T GLVSYSDESEDED
Sbjct: 241 TSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. NCBI nr
Match: XP_008466362.1 (PREDICTED: protein FAM192A [Cucumis melo] >KAA0050273.1 protein FAM192A [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 190/266 (71.43%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKA VRRETPV+RPPSMII+VKPQAKKARIEPRSP+ AG   ++P AKAEEPS+S KT D
Sbjct: 181 EKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPSKSVKTLD 213

Query: 241 TVSDRPLEAVA-TGLVSYSDESEDED 266
           T SDRPLEA A TGLVSYSDESEDED
Sbjct: 241 TNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. NCBI nr
Match: TYJ98134.1 (protein FAM192A [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 190/266 (71.43%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS                   
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS------------------- 150

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 151 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 210

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKA VRRETPV+RPPSMII+VKPQAKKARIEPRSP+ AG   ++P AKAEEPS+S KT D
Sbjct: 211 EKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPSKSVKTLD 243

Query: 241 TVSDRPLEAVA-TGLVSYSDESEDED 266
           T SDRPLEA A TGLVSYSDESEDED
Sbjct: 271 TNSDRPLEAAAITGLVSYSDESEDED 243

[Close]

BLAST of Spg007011.1 vs. NCBI nr
Match: XP_022993730.1 (protein FAM192A [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 188/266 (70.68%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKAPVR+ETPVTRPPSMII+VKPQAKKARIEPRSPE+A  +A++P+AKAEE SES +T D
Sbjct: 181 EKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESSESVRTHD 213

Query: 241 TVSDRPLEAVAT-GLVSYSDESEDED 266
           T +DRPLEA  T GLVSYSDESEDED
Sbjct: 241 TSNDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. NCBI nr
Match: XP_022938625.1 (uncharacterized protein LOC111444804 [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 188/266 (70.68%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+L+E++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLSEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKAPVR+ETPVTRPPSMII+VKPQAKKARIEPRSPE+AG +A++ +AKAEE SES +T D
Sbjct: 181 EKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESSESVRTHD 213

Query: 241 TVSDRPLEAVAT-GLVSYSDESEDED 266
           T SDRPLEA  T GLVSYSDESEDED
Sbjct: 241 TSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. ExPASy Swiss-Prot
Match: Q91WE2 (PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 2   EDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENK 61
           ED+S   I+   FVSE +LDE +K R E  E      D           R LYE L+E K
Sbjct: 4   EDDSNLVIK-KRFVSEAELDERRKRRQEEWEKVRKPEDPKECPEEAYDPRSLYERLQEQK 63

Query: 62  DKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGH 106
           D++  E+ E+FK +   + LDEDET FLD++   +   E+Q  + E +EL+ ++ +
Sbjct: 64  DRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELEELKEYRSN 118

[Close]

BLAST of Spg007011.1 vs. ExPASy Swiss-Prot
Match: Q9GZU8 (PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 4   ESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENKDK 63
           + G  I    FVSE +LDE +K R E  E      D           R LYE L+E KD+
Sbjct: 5   DDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQEQKDR 64

Query: 64  RDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGH 106
           +  E+ E+FK +   + LDEDET FLD++   +   E+Q  + E +EL+ ++ +
Sbjct: 65  KQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNN 118

[Close]

BLAST of Spg007011.1 vs. ExPASy TrEMBL
Match: A0A5D3BGC9 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00120 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.7e-83
Identity = 190/266 (71.43%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS                   
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS------------------- 150

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 151 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 210

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKA VRRETPV+RPPSMII+VKPQAKKARIEPRSP+ AG   ++P AKAEEPS+S KT D
Sbjct: 211 EKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPSKSVKTLD 243

Query: 241 TVSDRPLEAVA-TGLVSYSDESEDED 266
           T SDRPLEA A TGLVSYSDESEDED
Sbjct: 271 TNSDRPLEAAAITGLVSYSDESEDED 243

[Close]

BLAST of Spg007011.1 vs. ExPASy TrEMBL
Match: A0A5A7U2Y6 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G001250 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.7e-83
Identity = 190/266 (71.43%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKA VRRETPV+RPPSMII+VKPQAKKARIEPRSP+ AG   ++P AKAEEPS+S KT D
Sbjct: 181 EKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPSKSVKTLD 213

Query: 241 TVSDRPLEAVA-TGLVSYSDESEDED 266
           T SDRPLEA A TGLVSYSDESEDED
Sbjct: 241 TNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. ExPASy TrEMBL
Match: A0A1S3CR24 (protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.7e-83
Identity = 190/266 (71.43%), Postives = 201/266 (75.56%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKA VRRETPV+RPPSMII+VKPQAKKARIEPRSP+ AG   ++P AKAEEPS+S KT D
Sbjct: 181 EKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPSKSVKTLD 213

Query: 241 TVSDRPLEAVA-TGLVSYSDESEDED 266
           T SDRPLEA A TGLVSYSDESEDED
Sbjct: 241 TNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. ExPASy TrEMBL
Match: A0A6J1JZC4 (protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.4e-83
Identity = 188/266 (70.68%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+LNE++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLNEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKAPVR+ETPVTRPPSMII+VKPQAKKARIEPRSPE+A  +A++P+AKAEE SES +T D
Sbjct: 181 EKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESSESVRTHD 213

Query: 241 TVSDRPLEAVAT-GLVSYSDESEDED 266
           T +DRPLEA  T GLVSYSDESEDED
Sbjct: 241 TSNDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. ExPASy TrEMBL
Match: A0A6J1FKA5 (uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC111444804 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.4e-83
Identity = 188/266 (70.68%), Postives = 202/266 (75.94%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRS                   
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRS------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKEITPPAPAAQ 180
                                             FQAAVAAQSI+L+E++EITPPAPAAQ
Sbjct: 121 ----------------------------------FQAAVAAQSILLSEVREITPPAPAAQ 180

Query: 181 EKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKTAD 240
           EKAPVR+ETPVTRPPSMII+VKPQAKKARIEPRSPE+AG +A++ +AKAEE SES +T D
Sbjct: 181 EKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESSESVRTHD 213

Query: 241 TVSDRPLEAVAT-GLVSYSDESEDED 266
           T SDRPLEA  T GLVSYSDESEDED
Sbjct: 241 TSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Spg007011.1 vs. TAIR 10
Match: AT3G62140.1 (CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 195.3 bits (495), Expect = 6.3e-50
Identity = 132/269 (49.07%), Postives = 161/269 (59.85%), Query Frame = 0


Query: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR LYEILKENKDK+DAEFNER
Sbjct: 1   MVDETEKPIRLLNFVSEEQLDESKKERGERVEDGTFQRDRALYEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQGHEGSPHQVEQVTNSSA 120
           FKHRPPKALDEDETEFLDKLE SKREYERQ+A+ E+++LR+                   
Sbjct: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQLANEEDEQLRN------------------- 120

Query: 121 SVSLVMILLVHNVHEYYTQVPTFEFLLKHCFLVFFQAAVAAQSIMLNELKE--ITPPAPA 180
                                             FQAAVAA+S +L+E KE  + PPAP 
Sbjct: 121 ----------------------------------FQAAVAARSAILHEPKEAALPPPAPV 180

Query: 181 AQEKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPDAKAEEPSESAKT 240
            +E+ P+ +  P TRP   IIKVKPQ KKA+   +  +   G  +      +   +S K 
Sbjct: 181 TKEQKPIGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK- 214

Query: 241 ADTVSDRPLEAVATG--LVSYSDESEDED 266
              V+ +  E + TG  LVSYSDESED+D
Sbjct: 241 -GNVTGKTTEGLQTGLALVSYSDESEDDD 214

The following BLAST results are available for this feature:

BLAST of Spg007011.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549588.1	1.1e-83	71.05	protein FAM192A [Cucurbita pepo subsp. pepo]	[more]
XP_008466362.1	1.2e-82	71.43	PREDICTED: protein FAM192A [Cucumis melo] >KAA0050273.1 protein FAM192A [Cucumis...	[more]
TYJ98134.1	1.2e-82	71.43	protein FAM192A [Cucumis melo var. makuwa]	[more]
XP_022993730.1	1.5e-82	70.68	protein FAM192A [Cucurbita maxima]	[more]
XP_022938625.1	1.5e-82	70.68	uncharacterized protein LOC111444804 [Cucurbita moschata]	[more]

BLAST of Spg007011.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WE2	1.1e-06	36.21	PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1	[more]
Q9GZU8	2.4e-06	35.09	PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1	[more]

BLAST of Spg007011.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGC9	5.7e-83	71.43	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G0012...	[more]
A0A5A7U2Y6	5.7e-83	71.43	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G0012...	[more]
A0A1S3CR24	5.7e-83	71.43	protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1	[more]
A0A6J1JZC4	7.4e-83	70.68	protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1	[more]
A0A6J1FKA5	7.4e-83	70.68	uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]

BLAST of Spg007011.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62140.1	6.3e-50	49.07	CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..265
None	No IPR available	PANTHER	PTHR13495:SF1	BNAC06G18360D PROTEIN	coord: 1..104
None	No IPR available	PANTHER	PTHR13495:SF1	BNAC06G18360D PROTEIN	coord: 154..209
IPR019331	FAM192A/Fyv6, N-terminal	PFAM	PF10187	FAM192A_Fyv6_N	coord: 22..102 e-value: 3.7E-16 score: 59.4
IPR039845	PSME3-interacting protein	PANTHER	PTHR13495	NEFA-INTERACTING NUCLEAR PROTEIN NIP30	coord: 1..104 coord: 154..209

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg007011	Spg007011	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007011.1-five_prime_utr	Spg007011.1-five_prime_utr-scaffold10:39884172..39884300	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39884301..39884357	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39884461..39884535	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39885727..39885784	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39885970..39886025	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39886183..39886245	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39887027..39887093	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39887353..39887516	CDS
Spg007011.1-cds	Spg007011.1-cds-scaffold10:39887865..39888122	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg007011.1-three_prime_utr	Spg007011.1-three_prime_utr-scaffold10:39888123..39888306	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg007011.1	Spg007011.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus