Spg006841.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg006841.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	histone chaperone ASF1B-like
Location	scaffold10: 38369999 .. 38372117 (+)
Sequence length	696
RNA-Seq Expression	Spg006841.1
Synteny	Spg006841.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCCGTCAACATCACGAACGTCACGGTCTTGGATAATCCTGCCGCGTTTCTAAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTGACTCCGCTTAAAGACGGTAATCTGTTTTATTTTGTTAGATCGTATCGCGTCATCGGTAATCCGGAGTATTATTTTTTGAATGATGGTTTAAACAGTTGATGTTGGGATAATTAGATGTTTGCTTGAATTTCTTTTACTGGATTCATCAGATTAAATTGGAAATGGAAAATAACTTGAGGGATTGCTTCCGATTTGCTTAAGATTGAGTTGAAAGAAAGATTGGTATTTGCAAAATTAGGAGAACCCTAGAAATACATATGTGATTTGGCTTGTTAACTGGATATTTGTGTATGGTTAATGACTTATATGCAATCTTTACTTTGATTTCATTTTCTGGAAGAAAACTTTATGCCTCCCGATATCCTGTATACTACACGGATTTAAAATTCAGTTCAAATCTTGTAACCTAACGCCTGTATTCTAATGATGTGCTTTTTCTTGCTTAAATTTTGGTTCTGATGCTTGGGTCTTGCTAGTTGTGTGAGATCTTTGTTCTTTCTACTGAACTGTTTTGAGATCTTCTTTGAAGGGTATTTGTATGTATAGCTCACTTTTTCTTAAAGAGACTGCCTTTTGGGCCTTTTAACATCCAATGCTTATTCCAAAAGTTCTTACTCATCATCTTTGGATTCTTTTTGCTTTAAATTTTTTGGTAGAGATTGATTTAGAATGACGAATGCTAGATATGGTTAAATGAACACCAACTTTATAAGACTTCAATCTGTCATGCCAAGGTCAATCTCAATCTCTTAATTTGTTTCAATCATGGTCTTTGGATTTTTCTTTTGGGGTTGGGGGGTTGAATGGATTTTTCTTTAGTAGTGGTAGTGATTACATATGGTATTGAAATAAAAAGTTCTATGTCAAAAACTCTTTGCAATATTCTTTCTTTTCGGATTAATATTATGAGTTACTTGTCAAATCTCTTGCCAATTTTTGAGGCTAGATGTGAGGAGAGTATAAAAAAATATAAATATAAGATCAATAACCTATTCCTAATCTATGGCTTGTTAATTTTTAGATTGTAAATTTCTTATGCTATTAGCGCAATAGTTGGTATATTCTATTTTGGTTTTCGACTCAAATAGTACTACTTTCAGAAATCAACTTTACTGACATGTTATCTCTTTGATTATTCTACAGATTTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTCGTTGGACCCGTTAACGTTGGCAATTACCGTTTTGTTCTTCAGGTAATATATGCTGAATCCTTCACCTTCTCTGTGGAGCCTAAATTACATATCAATGTCGACCGAAACATTAGCCTCTTAACCGGAACTGGAAGTCTTGAATTTAGTGATAGTCTAACACAGTTTAAAATGACTTGAGTTCAAATTCTAGTTAATATTTGAGTTCATACATACTATCAACTTAAGTTTAGAAATTTAGTGAAAGAGATATCGTCCTTGTCAAACACTGATTTATAGGAATAACTGAAGAGATTTCATTGTCTTGATTCTAATTTCTGCACAAACTGGAATCTGAGTGGTCTCTCCTGGTACATTTCTTGGGGTTGAATATTTTGCAGGCAGACCCTCCAGATCCCTCAAAAATTAGGGAGGAAGACATCACCGGGGTCACAGTACTGTTATTAACATGCTCATACATGGGACAAGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCCCCAAAAGTTCTGATCGATAGGATCCAAAGAAATATTCTTGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGATAACTCTGAACATGGTGCAGAGCAACAGTCATCTCCACCCCACCACTCAACTGAAATCCCTAATAACGAAGAATTAGAAGAAGAAGAAGAAGAATTGCAGCCATTGCCATCACCATCGGTGGCAGCAAAGGAACCAGCTCTGGATCAGGATGCCATTGATTCTGAACCTCAGCCCTCGGTCACGGCGTGA

mRNA sequence

ATGAGTGCCGTCAACATCACGAACGTCACGGTCTTGGATAATCCTGCCGCGTTTCTAAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTGACTCCGCTTAAAGACGGTAATCTGTTTTATTTTGTTAGATCGTATCGCGTCATCGATTTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTCGTTGGACCCGTTAACGTTGGCAATTACCGTTTTGTTCTTCAGGCAGACCCTCCAGATCCCTCAAAAATTAGGGAGGAAGACATCACCGGGGTCACAGTACTGTTATTAACATGCTCATACATGGGACAAGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCCCCAAAAGTTCTGATCGATAGGATCCAAAGAAATATTCTTGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGATAACTCTGAACATGGTGCAGAGCAACAGTCATCTCCACCCCACCACTCAACTGAAATCCCTAATAACGAAGAATTAGAAGAAGAAGAAGAAGAATTGCAGCCATTGCCATCACCATCGGTGGCAGCAAAGGAACCAGCTCTGGATCAGGATGCCATTGATTCTGAACCTCAGCCCTCGGTCACGGCGTGA

Coding sequence (CDS)

ATGAGTGCCGTCAACATCACGAACGTCACGGTCTTGGATAATCCTGCCGCGTTTCTAAATCCATTTCAGTTCGAGATCTCATATGAGTGCTTGACTCCGCTTAAAGACGGTAATCTGTTTTATTTTGTTAGATCGTATCGCGTCATCGATTTAGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTCGTTGGACCCGTTAACGTTGGCAATTACCGTTTTGTTCTTCAGGCAGACCCTCCAGATCCCTCAAAAATTAGGGAGGAAGACATCACCGGGGTCACAGTACTGTTATTAACATGCTCATACATGGGACAAGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAGCTTCGTGAGGAACCTCCCCCAAAAGTTCTGATCGATAGGATCCAAAGAAATATTCTTGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGATAACTCTGAACATGGTGCAGAGCAACAGTCATCTCCACCCCACCACTCAACTGAAATCCCTAATAACGAAGAATTAGAAGAAGAAGAAGAAGAATTGCAGCCATTGCCATCACCATCGGTGGCAGCAAAGGAACCAGCTCTGGATCAGGATGCCATTGATTCTGAACCTCAGCCCTCGGTCACGGCGTGA

Protein sequence

MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSSPPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA

Homology

[Close]

BLAST of Spg006841.1 vs. NCBI nr
Match: XP_038875350.1 (probable histone chaperone ASF1A [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 7.6e-102
Identity = 200/231 (86.58%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN     EEEELQP PSPS  A EP+LDQ+AIDS PQPSVTA
Sbjct: 181 SPHHSGEALNN-----EEEELQPPPSPS-PADEPSLDQEAIDSGPQPSVTA 212

[Close]

BLAST of Spg006841.1 vs. NCBI nr
Match: XP_008467163.1 (PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa] >TYK30466.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 8.4e-101
Identity = 198/231 (85.71%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDR+QRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN      EEELQP PS S AA EP LDQ+AIDS PQPSVTA
Sbjct: 181 SPHHSAEALNN------EEELQPPPSAS-AADEPPLDQEAIDSGPQPSVTA 211

[Close]

BLAST of Spg006841.1 vs. NCBI nr
Match: XP_004150672.1 (probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical protein Csa_008063 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 7.1e-100
Identity = 196/231 (84.85%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDR+QRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN     EEEELQP PSPS AA EP LD++AIDS  QPSVTA
Sbjct: 181 SPHHSVEALNN-----EEEELQPPPSPS-AADEPPLDKEAIDSGSQPSVTA 212

[Close]

BLAST of Spg006841.1 vs. NCBI nr
Match: KAG6601833.1 (Histone chaperone ASF1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032538.1 Histone chaperone ASF1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 193/235 (82.13%), Postives = 203/235 (86.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVL++RIQRNILADKPRVTKFPINFHP+NSEHG EQ SS
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPS----PSVAAKEPALDQDAIDSEPQPSVTA 232
           PP    E  NNEE EEEE +  PLPS    PS A+ EP+L+QDA+D+E QPSVTA
Sbjct: 181 PP---AEAINNEEEEEEELQASPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVTA 219

[Close]

BLAST of Spg006841.1 vs. NCBI nr
Match: XP_022953035.1 (probable histone chaperone ASF1A [Cucurbita moschata])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 193/235 (82.13%), Postives = 203/235 (86.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVL++RIQRNILADKPRVTKFPINFHP+NSEHG EQ SS
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPS----PSVAAKEPALDQDAIDSEPQPSVTA 232
           PP    E  NNEE EEEE +  PLPS    PS A+ EP+L+QDA+D+E QPSVTA
Sbjct: 181 PP---AEAINNEEEEEEELQASPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVTA 219

[Close]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot
Match: Q9LS09 (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.7e-75
Identity = 145/206 (70.39%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKD             DLEWKL YVGS
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKD-------------DLEWKLIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQ+LESVLVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEF+
Sbjct: 61  AEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPP KVLID++QRNIL DKPRVTKFPINFHP+N +   +  + 
Sbjct: 121 RVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAP 180

Query: 181 PPHHSTEIPNNEE--LEEEEEELQPL 205
               +  + N E     E+ ++LQ +
Sbjct: 181 TEPFADSVVNGEAPVFLEQPQKLQEI 193

[Close]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot
Match: Q9C9M6 (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.1e-74
Identity = 146/212 (68.87%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKD             DLEWKL YVGS
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKD-------------DLEWKLIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFL 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDY+DEQL+EEPP KVLID++QRNIL+DKPRVTKFPI+FHP+  +  A   ++
Sbjct: 121 RVGYYVNNDYEDEQLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAA--TAA 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAK 213
           PP  S     +E+      E Q LP  SV  K
Sbjct: 181 PPEQS-----DEQQPNVNGEAQVLPDQSVEPK 192

[Close]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot
Match: Q9V464 (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-53
Identity = 102/179 (56.98%), Postives = 130/179 (72.63%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           M+ V+ITNV VLDNP++F NPFQFE+++EC+  LK+             DLEWK+ YVGS
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKE-------------DLEWKMIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AE E +DQ+L+++ VGPV  G + FV QADPPD SKI E D  GVT++LLTCSY GQEFV
Sbjct: 61  AESEEHDQVLDTIYVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINF---HPDNSEHGAE 177
           RVGYYVNNDY D ++RE PP K L +++ RNILA KPRVT+F IN+   H + + +G E
Sbjct: 121 RVGYYVNNDYADPEMRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVE 166

[Close]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot
Match: Q2KIG1 (Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 99/183 (54.10%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           M+ V + NV VLDNP+ F NPFQFEI++EC+  L +             DLEWK+ YVGS
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSE-------------DLEWKIIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D  GVTV+L+TC+Y GQEF+
Sbjct: 61  AESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNN+Y + +LRE PP K    ++QRNILA  PRVT+F IN+  DN+E   + +SS
Sbjct: 121 RVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWE-DNTEKLEDAESS 169

Query: 181 PPH 184
            P+
Sbjct: 181 NPN 169

[Close]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot
Match: Q9Y294 (Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 99/183 (54.10%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           M+ V + NV VLDNP+ F NPFQFEI++EC+  L +             DLEWK+ YVGS
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSE-------------DLEWKIIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D  GVTV+L+TC+Y GQEF+
Sbjct: 61  AESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNN+Y + +LRE PP K    ++QRNILA  PRVT+F IN+  DN+E   + +SS
Sbjct: 121 RVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWE-DNTEKLEDAESS 169

Query: 181 PPH 184
            P+
Sbjct: 181 NPN 169

[Close]

BLAST of Spg006841.1 vs. ExPASy TrEMBL
Match: A0A5A7TY70 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00060 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101
Identity = 198/231 (85.71%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDR+QRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN      EEELQP PS S AA EP LDQ+AIDS PQPSVTA
Sbjct: 181 SPHHSAEALNN------EEELQPPPSAS-AADEPPLDQEAIDSGPQPSVTA 211

[Close]

BLAST of Spg006841.1 vs. ExPASy TrEMBL
Match: A0A1S3CSW5 (probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101
Identity = 198/231 (85.71%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDR+QRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN      EEELQP PS S AA EP LDQ+AIDS PQPSVTA
Sbjct: 181 SPHHSAEALNN------EEELQPPPSAS-AADEPPLDQEAIDSGPQPSVTA 211

[Close]

BLAST of Spg006841.1 vs. ExPASy TrEMBL
Match: A0A0A0KUZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.4e-100
Identity = 196/231 (84.85%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV
Sbjct: 61  AEDETYDQLLESVLVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVLIDR+QRNILADKPRVTKFPINFHP+NSEHGAEQQ S
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAKEPALDQDAIDSEPQPSVTA 232
            PHHS E  NN     EEEELQP PSPS AA EP LD++AIDS  QPSVTA
Sbjct: 181 SPHHSVEALNN-----EEEELQPPPSPS-AADEPPLDKEAIDSGSQPSVTA 212

[Close]

BLAST of Spg006841.1 vs. ExPASy TrEMBL
Match: A0A6J1GNK0 (probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 193/235 (82.13%), Postives = 203/235 (86.38%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVL++RIQRNILADKPRVTKFPINFHP+NSEHG EQ SS
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPS----PSVAAKEPALDQDAIDSEPQPSVTA 232
           PP    E  NNEE EEEE +  PLPS    PS A+ EP+L+QDA+D+E QPSVTA
Sbjct: 181 PP---AEAINNEEEEEEELQASPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVTA 219

[Close]

BLAST of Spg006841.1 vs. ExPASy TrEMBL
Match: A0A6J1JNV5 (probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 189/237 (79.75%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD             DLEWKLTYVGS
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKD-------------DLEWKLTYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPPPKVL++RIQRNILADKPRVTKFPINFHP+NSEHG E  SS
Sbjct: 121 RVGYYVNNDYDDEQLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEPNSS 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPS--------PSVAAKEPALDQDAIDSEPQPSV 230
           PP    E  NNE  EEEE +  PLPS        PS A+ EP+L+QDA+D+E QPSV
Sbjct: 181 PP---AETINNE--EEEELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPSV 219

[Close]

BLAST of Spg006841.1 vs. TAIR 10
Match: AT5G38110.1 (anti- silencing function 1b )

HSP 1 Score: 282.7 bits (722), Expect = 2.6e-76
Identity = 145/206 (70.39%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKD             DLEWKL YVGS
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKD-------------DLEWKLIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQ+LESVLVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEF+
Sbjct: 61  AEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFI 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDYDDEQLREEPP KVLID++QRNIL DKPRVTKFPINFHP+N +   +  + 
Sbjct: 121 RVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAP 180

Query: 181 PPHHSTEIPNNEE--LEEEEEELQPL 205
               +  + N E     E+ ++LQ +
Sbjct: 181 TEPFADSVVNGEAPVFLEQPQKLQEI 193

[Close]

BLAST of Spg006841.1 vs. TAIR 10
Match: AT1G66740.1 (ASF1 like histone chaperone )

HSP 1 Score: 279.3 bits (713), Expect = 2.9e-75
Identity = 146/212 (68.87%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDGNLFYFVRSYRVIDLEWKLTYVGS 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKD             DLEWKL YVGS
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKD-------------DLEWKLIYVGS 60

Query: 61  AEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFV 120
           AEDETYDQLLESVLVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+
Sbjct: 61  AEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFL 120

Query: 121 RVGYYVNNDYDDEQLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPDNSEHGAEQQSS 180
           RVGYYVNNDY+DEQL+EEPP KVLID++QRNIL+DKPRVTKFPI+FHP+  +  A   ++
Sbjct: 121 RVGYYVNNDYEDEQLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAA--TAA 180

Query: 181 PPHHSTEIPNNEELEEEEEELQPLPSPSVAAK 213
           PP  S     +E+      E Q LP  SV  K
Sbjct: 181 PPEQS-----DEQQPNVNGEAQVLPDQSVEPK 192

The following BLAST results are available for this feature:

BLAST of Spg006841.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875350.1	7.6e-102	86.58	probable histone chaperone ASF1A [Benincasa hispida]	[more]
XP_008467163.1	8.4e-101	85.71	PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putativ...	[more]
XP_004150672.1	7.1e-100	84.85	probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical prot...	[more]
KAG6601833.1	3.5e-99	82.13	Histone chaperone ASF1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG703...	[more]
XP_022953035.1	3.5e-99	82.13	probable histone chaperone ASF1A [Cucurbita moschata]	[more]

BLAST of Spg006841.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS09	3.7e-75	70.39	Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1	[more]
Q9C9M6	4.1e-74	68.87	Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 S...	[more]
Q9V464	4.0e-53	56.98	Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1	[more]
Q2KIG1	2.4e-50	54.10	Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1	[more]
Q9Y294	2.4e-50	54.10	Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1	[more]

BLAST of Spg006841.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY70	4.0e-101	85.71	Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CSW5	4.0e-101	85.71	probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV...	[more]
A0A0A0KUZ5	3.4e-100	84.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1	[more]
A0A6J1GNK0	1.7e-99	82.13	probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 P...	[more]
A0A6J1JNV5	1.1e-95	79.75	probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=...	[more]

BLAST of Spg006841.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38110.1	2.6e-76	70.39	anti- silencing function 1b	[more]
AT1G66740.1	2.9e-75	68.87	ASF1 like histone chaperone	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017282	Histone deposition protein Asf1	PIRSF	PIRSF037759	Asf1	coord: 1..225 e-value: 1.5E-72 score: 242.1
IPR036747	Histone chaperone ASF1-like superfamily	GENE3D	2.60.40.1490		coord: 1..170 e-value: 5.1E-73 score: 246.0
IPR036747	Histone chaperone ASF1-like superfamily	SUPERFAMILY	101546	ASF1-like	coord: 1..166
IPR006818	Histone chaperone ASF1-like	PFAM	PF04729	ASF1_hist_chap	coord: 1..166 e-value: 4.6E-64 score: 215.0
IPR006818	Histone chaperone ASF1-like	PANTHER	PTHR12040	ANTI-SILENCING PROTEIN 1	coord: 1..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..231
None	No IPR available	PANTHER	PTHR12040:SF18	HISTONE CHAPERONE ASF1B-RELATED	coord: 1..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg006841	Spg006841	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006841.1-cds	Spg006841.1-cds-scaffold10:38369999..38370146	CDS
Spg006841.1-cds	Spg006841.1-cds-scaffold10:38371235..38371350	CDS
Spg006841.1-cds	Spg006841.1-cds-scaffold10:38371686..38372117	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg006841.1	Spg006841.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006333	chromatin assembly or disassembly
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006337	nucleosome disassembly
biological_process	GO:0006335	DNA replication-dependent chromatin assembly
biological_process	GO:0006336	DNA replication-independent chromatin assembly
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding