Spg006784.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg006784.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 54471109 .. 54473403 (+)
Sequence length447
RNA-Seq ExpressionSpg006784.1
SyntenySpg006784.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAACGCGAGCCGCCGCCTTCCGTCGCACATCGCCGCCGCTCGGCAGTTCTCTCGTAGCCGTAAATCGTCGCGAGCTGCTGGTGAGTTCCCTCTCAGATTTCTCTCTCGTGTGGCTCTCTCTCTCGGTCTCACTCTCTTTCTCCCTCTCTCGGTCTACAGCGCGCCGCCGTCCTTCTCTGTTGCAGATCTGCACGCCGTCGCCCCTCCGCCGTCGCCTTTCGCCGCGCCGCCCACCATTCACGCTCGCCGCCGTCTGCTCTGCCATCGCCGTCGCCACGTTGTGCAAGTGGTGCGGACAACAACGTTTTTGGGTCGTTTTTACAATTTTCCAGCAGCTTTGGCTTTGGGTAAGTGAGATTGAAAGCTTTTCAATTTGATTTTAGTGTTTAATCGTATACCCACTAATGTTTAGAACTTGTTCAGCAAGCCCTTCTTTTGATTTTCAACGTTTCAGACAATGGGTATTTGATTTCCAGTGGACTTGAATATTTCTAGTAGTGGGTAAGAGTTTCTAAGATGAATTTGGGTTGGTTATGGTGTGTAATCAAATGCCCATTGACTTTAGCTATTGATTTTAAGGTACCCATAGTATTTGGAGGCAGATTTGTCGATTTGGAGCGAAATTTAGAACCCGGACAACAAGCTTAAGGTTCTATTTTGGTGAGTTTTGGGTGTGAAATTTATCTCCATGATTATTTCGCTCCTAGTTGTATGCTTGCAATAATCTCCTTTTGGTTTAAGAATTCTTTTCACCTTATGTAGATTGATTAAAGGCCTTGGGAGCTAAGAAGCTAAATTAGCATTTGGCAAACATTATTTGGCTATGTAAGTAACCTTACTACTTGGAAAGCCTTGGCTAGGCTAGGCTATTTATTATGAATTGTTACATGCCTTAAATATTATAAAACAAGAGACATCGATTATGTACGGTTGGAATATGGAATGTGATATTGTGTGTTCTGGTGATACTAAATCTTCTGGTTATGCGTGTGTTTGTCACTATTGAATGCTCGGAATGTTTGTGTTGGTAAGTATGAAATGTTCTGCTTGGGTAAACCTTGAAAGCTTTGAATGCTCTATGTTGGGGAAGATAGGATGTTTTATATGGTTGAGTTGTGGATGTGAGACCTAACTAGCTTTGTTTTGTGGAAGTTCGGAGTCTATTCTATTGATTGGAAGTGTTGTGGAAGTTTGTAGTTGGGCAGTTCTGAATATAGAAGCGTATACTCTTGCTTACAGGTGATAAGAAATTTGAGGTCAGCTATACGAACGTCGTTGTGCTGCCGAATTTTCAGTAGCATTACAGGGAATAACGAGGCTAAGTTTTGTGATATCACTTGGATTACGATGTGCTAATATTGACTGCTGGCTGTTTAAAATATGCATATACCTTTTCTATTTAGTGTTATGGATGTTGGTTATGATATCTATGCTTGAATGAGATGAAAGGCGAGGTAGTTAACACATGTGAAATTAGCCCTTTAGAGACCTTTATGGGAAAGAAACTTGATGGTTAGGTTGCAAGTTAAATCAGACTCTGTTAACAGGGGCCCTAATACGAAATGAGGATAGGTTACTTATTCCAGTAGGGACCGTGGCAATTAAACACCCAGGACTGAAATGTTTATAGACTGAGATGAGGAGCTAAATGGGCGGGACTCAGCTTCGCAGACTAGGTGCCATCTACTATCTGTGGGAGTAAAGTTCCGACTACAAACCCATGGATGCCCCACCAGTGAGTTGGTAGTTATAGTGTTATGCACACATAGGTGCCTTGATGGGTGAGACTTGGCTTCACTGACTGGGTGCCTTCTACCATCAGTAGGAGTAGAGATCTCTCGCGATTCCCACTTGTGTACCTCCAGTGAGTTGGTAAGAATGTGACAGGCTGGTTAATTGTCCACGTGACCCGTACGTCATGATAGATGAAACGAAATGAAATGAAATGACTATCAGGTCCTTTAACAACAACTAACCTCAAGTTATCCATGTAATGCTTGTAAATCTCCTCCCAATAGTAGTGTTACTTACTGAGTATTTTTAATACTCATTCTTTTTAAAATGTTTCCTTTCAGGTACGAGCAAGGACATACAAAGCGTGTGACGGATTGCTGCTGACGAGCCATGGAAAATATGTGAACGTTACTTCCGCGTAGTTTAGTTCCTCATTTTTCTTTTAGTCAGATTTGTAAATTGTGGGTTTTAAGGGTTTAAATATGTCTGTATATTGATTTTAGAAAGCTTCTGTTTTAATGAAGTTTTTGCAAGTTTCTTGTTTTATTTGGGATCCCAG

mRNA sequence

CAGAACGCGAGCCGCCGCCTTCCGTCGCACATCGCCGCCGCTCGGCAGTTCTCTCGTAGCCGTAAATCGTCGCGAGCTGCTGGTGAGTTCCCTCTCAGATTTCTCTCTCGTGTGGCTCTCTCTCTCGGTCTCACTCTCTTTCTCCCTCTCTCGGTCTACAGCGCGCCGCCGTCCTTCTCTGTTGCAGATCTGCACGCCGTCGCCCCTCCGCCGTCGCCTTTCGCCGCGCCGCCCACCATTCACGCTCGCCGCCGTCTGCTCTGCCATCGCCGTCGCCACGTTGTGCAAGTGGTGCGGACAACAACGTTTTTGGGTCGTTTTTACAATTTTCCAGCAGCTTTGGCTTTGGGTGATAAGAAATTTGAGGTACGAGCAAGGACATACAAAGCGTGTGACGGATTGCTGCTGACGAGCCATGGAAAATATGTGAACGTTACTTCCGCGTAG

Coding sequence (CDS)

CAGAACGCGAGCCGCCGCCTTCCGTCGCACATCGCCGCCGCTCGGCAGTTCTCTCGTAGCCGTAAATCGTCGCGAGCTGCTGGTGAGTTCCCTCTCAGATTTCTCTCTCGTGTGGCTCTCTCTCTCGGTCTCACTCTCTTTCTCCCTCTCTCGGTCTACAGCGCGCCGCCGTCCTTCTCTGTTGCAGATCTGCACGCCGTCGCCCCTCCGCCGTCGCCTTTCGCCGCGCCGCCCACCATTCACGCTCGCCGCCGTCTGCTCTGCCATCGCCGTCGCCACGTTGTGCAAGTGGTGCGGACAACAACGTTTTTGGGTCGTTTTTACAATTTTCCAGCAGCTTTGGCTTTGGGTGATAAGAAATTTGAGGTACGAGCAAGGACATACAAAGCGTGTGACGGATTGCTGCTGACGAGCCATGGAAAATATGTGAACGTTACTTCCGCGTAG

Protein sequence

QNASRRLPSHIAAARQFSRSRKSSRAAGEFPLRFLSRVALSLGLTLFLPLSVYSAPPSFSVADLHAVAPPPSPFAAPPTIHARRRLLCHRRRHVVQVVRTTTFLGRFYNFPAALALGDKKFEVRARTYKACDGLLLTSHGKYVNVTSA
Homology
The following BLAST results are available for this feature:
BLAST of Spg006784.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg006784.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg006784.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg006784.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg006784Spg006784gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg006784.1-cdsSpg006784.1-cds-scaffold1:54471109..54471457CDS
Spg006784.1-cdsSpg006784.1-cds-scaffold1:54472350..54472366CDS
Spg006784.1-cdsSpg006784.1-cds-scaffold1:54473186..54473266CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg006784.1-three_prime_utrSpg006784.1-three_prime_utr-scaffold1:54473267..54473403three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg006784.1Spg006784.1-proteinpolypeptide