Spg005348.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg005348.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 36080338 .. 36081916 (-)
Sequence length504
RNA-Seq ExpressionSpg005348.1
SyntenySpg005348.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCGCACGTCTCCCTCTCCGACCGCCGCAGCACGCCACGACGCCGGCGCCCCCTTCTCCGGTGACTCGCGGTACACACGGCGGCAACAACTCGTTTTCGGCCAGCCATCACAGCAGGTTCGTTTTTCCTTTTTCGTCTGTGTGGCTTGTGGTTATGCATCTCCTCTCTCGTCGATCTCTCACGCCCATACCCTCCCTTCTCTGTCTCATGTTGTAGTAGCGTGGATGCGCGTTCTTAGCGTTGTTTCCGGCAGCAACACTGTAGGCGCGAACAGCAGCGAGGGGGGACCATTTTTCCGCGTTTTCGGGTGTTTTAGGTGAGTTCTCGCAGTGGGTAAGTTGGTTTGAGGCTTATGTGGGTTAGTTCTTGCATTTAAACAATTACCCATTCACTTTCCTTTCCATTCAGCAGGCGTTTCTTTTCATAACCGACGTTCTAGTAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGGTAAGTGAATTAAGTCAAGTTTTCGAATGATTTATGTGTGTTAGATGAATACCCATTGATTTTTGCCATTGAATTTAAGATGCCCATTGCGTTTGGTGATTAAATTGTTGGATTTAGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTCTGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGTCGATCAAGGATTTGTTGGGCTAAGGTAAGTAGTTTTTTTGGTTTATGTCGTATGCTTTGGACCCATGTATTCATTATGTCACTATGCTAGTATGAGATAAGTATGAATGGTTAGCCTTAGAATTGGGGAACATGATTGTTTTACTCTTTTGGAAGCATGAGTTGGATTTAAAATCTAAGTCTTACCCTTGGGTTCCAATAAGCATGATTGATTCACTTTGAAGCAAGAGGATAGTATGAAAATGTTAAGGTTGGTTGTAGCATGTTGAGTTAGCCTTAATGTAAGTAGCCGTTGGAATAAATTATCTGCTTTAAATTCATTTATGTTGAGTATGGTTTGCGATAGCATGCTCTGGGTTAAATCCTAAAGTTGCCCCTTGGAATTTAAGTAGCTAATTGTATTCAAAATTCCATGTTTTAAGTGCAATGCATGATAGATGAACATGGTAAGTAACAAGCTGCATTGGAATGAAATGTGTATGTTTGGAATGATTTGGTTACTCCTGGCATGGAAATGTGTATAAGTGGTTCGGATTGAGACTGAGGTGATACGTTGCGTTAATTTCGAGAATATGGCTACTACATGTATAGTTGTGTTGTGTGATAGAAGCGAGTGTATGACTGATGTACATTTTATAGCTGACTGACATTGTTGTGGGCAACTGGGGGTTTGTGTTTTTTTCTACTTAGGAGGGTTGTCGTTAAAAAAAAAATAGCAAGAGTTAAGGGGTCCAAAAAGGGAAAGGATTAAGAAAGGGAAAGGAATAGGCTAGTGCCTTAGAAGAGGGGTCGTGTCAATTAAACACCTAGGACTTAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCAGGACTTGGCTTCGCAGTCCCACCAGTGAAATGGTAGTTTAG

mRNA sequence

TGCCGCACGTCTCCCTCTCCGACCGCCGCAGCACGCCACGACGCCGGCGCCCCCTTCTCCGGTGACTCGCGGTACACACGGCGGCAACAACTCGTTTTCGGCCAGCCATCACAGCAGGTTCGTTTTTCCTTTTTCGTCTGTGTGGCTTGTGGTTATGCATCTCCTCTCTCGTCGATCTCTCACGCCCATACCCTCCCTTCTCTGTCTCATGTTGTAGTAGCGTGGATGCGCGTTCTTAGCGTTGCGTTTCTTTTCATAACCGACGTTCTAGTAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGATGCCCATTGCGTTTGGTGATTAAATTGTTGGATTTAGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTCTGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGTCGATCAAGGATTTGTTGGGCTAAGGACTTGGCTTCGCAGTCCCACCAGTGAAATGGTAGTTTAG

Coding sequence (CDS)

TGCCGCACGTCTCCCTCTCCGACCGCCGCAGCACGCCACGACGCCGGCGCCCCCTTCTCCGGTGACTCGCGGTACACACGGCGGCAACAACTCGTTTTCGGCCAGCCATCACAGCAGGTTCGTTTTTCCTTTTTCGTCTGTGTGGCTTGTGGTTATGCATCTCCTCTCTCGTCGATCTCTCACGCCCATACCCTCCCTTCTCTGTCTCATGTTGTAGTAGCGTGGATGCGCGTTCTTAGCGTTGCGTTTCTTTTCATAACCGACGTTCTAGTAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGATGCCCATTGCGTTTGGTGATTAAATTGTTGGATTTAGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTCTGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGTCGATCAAGGATTTGTTGGGCTAAGGACTTGGCTTCGCAGTCCCACCAGTGAAATGGTAGTTTAG

Protein sequence

CRTSPSPTAAARHDAGAPFSGDSRYTRRQQLVFGQPSQQVRFSFFVCVACGYASPLSSISHAHTLPSLSHVVVAWMRVLSVAFLFITDVLVADLQVSASLSEFVIGCPLRLVIKLLDLGGFESPDSKLSFCFGCLKSWNLKENWLEVDQGFVGLRTWLRSPTSEMVV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg005348Spg005348gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg005348.1-cdsSpg005348.1-cds-scaffold6:36080338..36080377CDS
Spg005348.1-cdsSpg005348.1-cds-scaffold6:36081205..36081351CDS
Spg005348.1-cdsSpg005348.1-cds-scaffold6:36081431..36081504CDS
Spg005348.1-cdsSpg005348.1-cds-scaffold6:36081674..36081916CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg005348.1Spg005348.1-proteinpolypeptide