Spg005285.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg005285.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold11: 34874500 .. 34881649 (+)
Sequence length	3438
RNA-Seq Expression	Spg005285.1
Synteny	Spg005285.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGTTTTTGGGGATTCACATTGCTGATTCAAAAATGGAATGTTTGACAGCAAAATTTGGTTGTAAGCAGGGTTCATGGCCTTCTAAATATCTGGGGATTCCTTGGGGGGCAGTTCGAAAGGTTCTCAGTTTTGGCAGCCAGTTATCGAAAGAATCCAACATAAGCTTCATAACTGGAAATACTCTTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAATGTTTGCAAAATCTCTGGATAAGCTTATTCGAGATTTTTTTTTGGAGGGCTCCAAAGGCGAGGGCGTCGTGCAAAATGAAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCATTGGAAATCCCCATCGCCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGGTAATACCCTTTGGCAGCAGCTTATTATTGCTAAATATTATTACTCAAAATCAACTTGTATTTGGCCTAAACATATTCAGAGAGGATCTTTTAAATCTCCTGGGCGCTTTATTTGTTCTACCAGAGATCTTGTTGCTAGTCGTATTCAGAGACGGCTTGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGCGGAGTCTTGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGTTCGGAAGGTACAGTTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTCTTCGTCGAAATTTAAATGATTCGAAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTTCTATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCACTTATGGGAGATATGGTTGGTGATTCTTACCCTAGATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTATTCTTGGAGCTATTTATACGTCTGATCGACTTCAAAGACAAAAGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATCCTTATCATCTATTTGTGCATTGCTCCTTTGCTTTCCGTTATTGGTCTACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTTTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATAGTGTGAAGAAGATCTTTTGGCTTGCTCTTAACCGGGTCTTCCTCTGGTTTCTTTGGGGCGAAAGGAATGGTCGAATTTTCAGGGATTCATTCTCATCTTTTGATAACTTTATGGATTTGATCCTTTTTTATGCTTCATATTGGTGCAAATGTAAACATCCCTTTTCTGATTATAGTCTTTCTTCTTTAATTCTTAATTGGAGATCATTCTTGTAATCACCTTCTTAGGTGTTGGAGTTTTACTCCTTTTATTTCATTTATCAATGAAATTTGTTTCCCTTCTCTAGAAAAGAATGTTACTATTTTTAACTATTTTTTTTATCTTCCTATAAAAAAGGAAGTAACTCCACTCCCCTATTATTTCTCTCCCCCTCCCTCCTATAAATCTTCATCTTCTTCGGTTACCATATACTACTCATCCCTATTATTTTTAATTATTTGAGTTTTTTTCTTTTGAGTTCAACAACATTTGGGGTGGGAGATTCGAACCTCTAACCTCTGGGTCAAGAGTGCATGCCAATAATACTTTCAAAATTGTAATTCATAATAAACAAATAATATAATTATTATTTGTAAATACTTTCAAATTGTATGTATGGTTAAAATTAAATTTTAAAATAGGAAAACCACGTGCGTGGAAAATCTAGTTTTATCCAAAAAAAAAAATTGAACACCATCAAGAGAAAACACACAGTCAAAAGATACAAACCTCCACAGTTGTCCTTGCTACTTCTGCAGCAGTGAGTTCAGTATTCCGCACTCTTTTGCAAACTTTCAGATCTTCAAGAGGATGATAACCTTTGTTATTCAAATAACTTGATGAATCTGGAACTGAATCTGGGTAATCAGCAGCAACTGAAACTTTTGACAAGCAAAGGTCACGTCCCTTAGATAACCAATGCAATTCTGTTGATCCGAATATTGGATTTCTGCCACTAAAAATTACCATAGAAACAAGAAACAAATATTCAATTCAAAAAAACTCAAAATGATAAGTTAAAGTCATAATATCAAAAGACCTCTTGGCTGAAACCACAAAAACAAAATGTAAATAAGGAAATACATTCTGATTTTTTTCACTACCAAAAAATTAACTCCATGAGACTTGATTGTTGTTTTCTTTTCTTCTTTTCTCTTTTTCTTTTTCCTTCTTTTTTTAAAACAAGAAGCGAAACTTTTCACACTGAAAAAAGACTAATGTTCCAAGGATATAAACTCCACACCGGAGCAAAAAAAGAAAGACAACCCAAACCACCAAGGGACAATAAATTAAAGAGGAAAGACTATGAGTTTTAAATGAGTCTGAACCATTACACCAATCTAAAGGATTAAAAATAACCAAATCCTTGAAACTTTCAAAGGTTGAGTACTTATCATTAAAAATCCTTCTGTTCCTTTCACACCAAAGGGACAATAGAAAAGGGCAATTAAGTGAAAATCACAGAATCTCCTTGTCATTCTTTATTTTTTTATAAGAAACCTCAAAAGGCAATATATTCCCAAAAAAAGGCCGAACGACCTAAGGACTAGGGGTGGAGATCACCCCTCTCGAAACCTATCTCAAAAAGTTTGTCAATCGTTAATAATCATCAACAGACTATTATTACAAAAGACCTTTTGGTGTAAAGTAATCCACCATGAGACCGTATTTTATACATAGTTACAAAAGAAATCGATACAAGATGACTTATGTTCAAATACCATAAAGTCAAAGCGCAACTAGCTATCACCTTGGCCTTCCTCTTCAGATTCCAAGCTTGTAAACTTTCAGAAAGCCAATCATCAACCTTTCTAGGAATAAAAATGAGATCCCTAACGGGCCAGCTACATAGCTCCACACCTTATAGGCAAACTCGCAATGGAGAAAGATGTGGCCAAGGTGTAAGACCTCCTATTACGCGCGTTTGCATAAGGAAGGGCAATCTTGGAAGAAGGGAAAAACAGTTAGAGGATGTGAGGACCACTGGAAATGTGGGAGTGAGTGCTTGATGTATTTGGGTAGCAGGGAATGTGGGGAGGTAGGAACCTTTTGCCTTCAACTGAGAGTGGTCTGAAAGGGAGAAAACCAGCCTCTCGAATTGTTGGGTTTCTTGTTCTTTCTGTATTTTGGGAGATTATCAATAGTATTATCAGATGAATAGCCCCTCTAACTATTGAAGAATTCTCAATAGGTCTTTGCTCTCCATATTTGTGTGTTGTTTGTAGCTTTTTTCTAGGTCTCTTTTAGGCATAGCCTTCACCTAGAAGGAGAGAGGCCAATCTTTGAACTTTCTATGCAATCTCTCATCCGTATTTAGGTTATGATAAGCTAAGGACCAAAGAAAAAATTTTACTTTCTTTGGACTTTTATGCTTCCATATTAAGCCGGATATTGTCGAATTTATCTTGGAGGATCTACTTAAGAGTTTTTGGAACACCGACTTGCTAGAGTACGGCCCTAATCCTCCCAACTGCCAAATAATTTAGTCCATACCCGAATTCAAGTGCACTGCATTGAGCTTCTCTATCAAGGCTACCCGGCCACCAATCTCTCTATCAAACAAAGCTCTTCATATGCCCAAATTCCAAGTTTGATTGTTATTATCCCAACAATTGTGAATGGCAGCGCCCTTTTTATGTGATATCGAGAATACATCAGGGAAGCTACTTTGTAAGGGTTGACAAAATCTAATGTTTTTCCCGTAGATGGCTTGAAACATGGTAAAACACTCAAAAAAAAGGATAGGTTGTAGCAATATCCGTCCACAACCTAAGCCTCCACTTCCATTCTCAAACGCCGCTTTTCTCCCCTCCACCTTCGTTCCTAGCCTTCACAGCCGTTTGAGTTCCCCTTGGTTTCTCTAGCCTCCAATCACCTTTCTTTTTCGTCTTCAAACTCCTACCGTTTGAGTTCTCCTTGGTTTTTGTCTTTAGACTCCATTTGTTTGAGTTCCGACATTCAGAACATCCTATTTTCGGTAAACTATGGAGGTGAGAAGTTCTAAGATTCTTAATTCTTTCTACTGTATCTGGTTTGAAGAGAACAATATTTTTGTAGAAGATTTGGCTTTCAGTAAGAAGATTTCTCTTTCATTCTCTCATCTAAGTTGGTTGGAGCACTCTTTGATTGAATTATTACAACAGCCGATTCAAAGTTTCTTTCGAAAGCAAATTCAAGATGGCTTTGGTGTAATCCGCCTAGGAAAACTTCGGTCTGCTTCAAAGTGGTTCTTCTGTTGTGTCATTTGGCCTTCCTCAGGTGGACGTCAGTTTATTCATGTGCCAAATGGGATCTTCCAAGAAAGGTTGGTTATCTTTTTGGGAGCTGATAGATGATTTCCTCAAGAGTATTAAAGTCCCATTACCATTATCTCATACTTCATCTAAATTTTCATCATCTCTGGTAATGGAAAACATTCCCAAGGCATGTGTACAAAAATCAGATGATGTTGTTTCACTAGAAAAGAATTCAATTTCTGGCTTTCCTTAGGTATCTTATTGGATTAGAAAAGATCATGAGGTTTCAAACATCAATTTTGAAGAACTTTGGGTGGTATCTAGATTATTTGCTCATAATAATTGGAAGGATATAATTGAGTCTCTGAAAGTTCATTTCAAATCCAAGATTTCGTTAAATCCACTTTTTGTTGACAAGGCTTTGGTCAAATTTGAAGATGATAATGTTTCTAAATCTTTAGACTCTGTTGGAAAATGGAAGGCATTTGGAGACTATCATCTGCTCATTGAAAAATGGTCTAGCAAGATTCATAGTCACCTAAGATTCTTGGAAGGGTATAGTGGATGGATTGCGATCAAGAATTTGAGTTTAAATTTTTGGTGTCGAAAATCTTTTGAAGCAATTGGAGCTTATTTTGGAGGATTAGAGTGTATTTCATATGAAACTCTTAATATGACCGTTATCTCAAAAGCTAAAATTAAGGTCAAGAGAAATTTATGTGGTTTTATGCCGGCGACTATAGAACTCAAGGACTTAAGTAGAGGGACTATTTATTTCCACTTTGAGGATGTGATTGCTTTAGATTCTCCAAATATTACCCATCGGAATCTTAAGTGATTTTTCAAATCCAATGGCTCTTTTTAGAGTCAAACAAGCAATGGAAGATGAAGGGTTTGATTTTCCAATTAAAGATTCACAAGTTGATTATTATGCAGAGATCCAGGAGATTCATTCAATTTCAAGGGATCCTAAGGTGATTTACAAAAAGGTTAGTTTACCTTGTGATATTTATAATTTGAAAGAGCATTCAGTTCCGTCAAATATTCCTCAGGTTGATGCCTCTTCAGTTGCCCAGCTTCCAAAAATTATTTCAGAAGAAAATTTACTAGTGAGAAATCAGTCTTTTGAAGTCCCTTTAATTGAACATGATGTCTGGATGGGTGTGAATGGGGAAAATTTCTAGTACTACCATAGTACATACTCCCTCCATTCGGCATTTGACACATCATTTATTGAGCATTTCATGATAAAATATTTTATCTCATGGGTCCCACACAATTCTTAAATACTTCTTTCATGGCAAACAATGAATGGAGGTAGTATGAAAAATTTTCCATACTACGGTAGTATTAGAAATTTTCCCAGTGTGAATGTTAGTGGTGGATTTCCAAGGCTGGTAATAAATGAGAAAGAGAAGGATTCATTAATTTCAAATGGGCTGCATGAAAAGGAAATGTTTTCTGTCGGAAATGTAGATTCCAAGATTCCTTTGCATGATGTATCTTTTGGGAATGATGGTTTTATTGGTGAGCTTTCTAATGGTAATTTGAAAAGTGACTCCAATTTTTCAAAAAATAAGGCTAAACCCTTGATTCCAGTGCAATCCTTGGTTACACTAATTGAAGAACTAAACTCCTCGGTTCTGGAAAATAATGAGGGTACAGTAATTGAAGCCTCCATTCTTCCCAATTACTTGAATTCGTTGATTCCATCAAGTGTTAAATAAGTTCGTGATCATTTTTGCAAATCTTATACAAACATTTATGTACGTAAGAAAGGAACAGCCTCTAAAGATGTTTCCGAGTTGAATGCTGATGTTCTGGAAAAAGCTGCCTCTAAGACACTGGTACCTCAGGTTGAAAATTATCAGGACAAAGACATAAGTCAGCAAAAACTTCTGTCCAAGCAACAGTTACATTTACCTCCATTTAAATCTTTCAGCCAATTAGATGTCCCTATACCAGGCTCAAATATCAGTTTAATTAAAGGGGTTATTAGGCCTTCTTCTCCAAAGGAAATGCCATCTACTTTAGAATCAGATGGGAAATCAGACATCAGTATAAGCAGTGAGGATTTGGAAGATCAAATAGTAGAAGAAGAGCCTAACAAAATTGTACTAGAAGAGTCTTTTACGGAAGCCTTTGAAATTCTTTTTTCTGATGTTGTTAATGAACAAGTCATTGATTCCTCTCATTTAGTGGTGCTAGAAGTAAATCCTCCTTCCATTCCCTCCAAATTTTCTTCTCTTATCGAGGTTTGTGGCCTACAGATGTGTGAAATTCCTTCTTTGTCACCACAAGTTAAAGTCTAATTGGGTTTCTTTATTCAGATTAGCAATGAAAATAATTTCTTCAAAAACTAGAGGCCTGGGGATAGCTCTAAACGAGTTGCTTTAAAGAAATTTTTTCAAAACCAATACCCTGATTTGGTGATATTTTAGGAGACGAAAGAGAGCAAAGTTTGTTATTCCAGAAAATTCAACCTATCTTGAGGGATCCTTCTTTCAAGTCCAAGCTTTTTGTTCAGATGATTGGAAAGCTTGATGTAACCAGCCCAATTGTTCCAAATGAGTTGATTGTCCTCGAGCAAAAGGCAGATAAATCAAATACTGAGTGTGAGCACAGCAGTTAG

mRNA sequence

ATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGTTTTTGGGGATTCACATTGCTGATTCAAAAATGGAATGTTTGACAGCAAAATTTGGTTGTAAGCAGGGTTCATGGCCTTCTAAATATCTGGGGATTCCTTGGGGGGCAGTTCGAAAGGTTCTCAGTTTTGGCAGCCAGTTATCGAAAGAATCCAACATAAGCTTCATAACTGGAAATACTCTTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAATGTTTGCAAAATCTCTGGATAAGCTTATTCGAGATTTTTTTTTGGAGGGCTCCAAAGGCGAGGGCGTCGTGCAAAATGAAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCATTGGAAATCCCCATCGCCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGGTAATACCCTTTGGCAGCAGCTTATTATTGCTAAATATTATTACTCAAAATCAACTTGTATTTGGCCTAAACATATTCAGAGAGGATCTTTTAAATCTCCTGGGCGCTTTATTTGTTCTACCAGAGATCTTGTTGCTAGTCGTATTCAGAGACGGCTTGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGCGGAGTCTTGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGTTCGGAAGGTACAGTTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTCTTCGTCGAAATTTAAATGATTCGAAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTTCTATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCACTTATGGGAGATATGGTTGGTGATTCTTACCCTAGATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTATTCTTGGAGCTATTTATACGTCTGATCGACTTCAAAGACAAAAGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATCCTTATCATCTATTTGTGCATTGCTCCTTTGCTTTCCGTTATTGGTCTACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTTTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATAGTGTGAAGAAGATCTTTTGGCTTGCTCTTAACCGGGTCTTCCTCTGGTTTCTTTGGGGCGAAAGGAATGGTCGAATTTTCAGGGATTCATTCTCATCTTTTGATAACTTTATGGATTTGATCCTTTTTTATGCTTCATATTGGTGCAAATATCTTCAAGAGGATGATAACCTTTGTTATTCAAATAACTTGATGAATCTGGAACTGAATCTGGGTAATCAGCAGCAACTGAAACTTTTGACAAGCAAAGTCAAAGCGCAACTAGCTATCACCTTGGCCTTCCTCTTCAGATTCCAAGCTTGTAAACTTTCAGAAAGCCAATCATCAACCTTTCTAGGAATAAAAATGAGATCCCTAACGGGCCAGCTACATAGCTCCACACCTTATAGGCAAACTCGCAATGGAGAAAGATGTGGCCAAGGTGTAAGACCTCCTATTACGCGCGTTTGCATAAGGAAGGGCAATCTTGGAAGAAGGGAAAAACAGTTAGAGGATGTGAGGACCACTGGAAATGTGGGAGTGGACGTCAGTTTATTCATGTGCCAAATGGGATCTTCCAAGAAAGGTTGGTTATCTTTTTGGGAGCTGATAGATGATTTCCTCAAGAGTATTAAAGTCCCATTACCATTATCTCATACTTCATCTAAATTTTCATCATCTCTGGTATCTTATTGGATTAGAAAAGATCATGAGGTTTCAAACATCAATTTTGAAGAACTTTGGGTGGTATCTAGATTATTTGCTCATAATAATTGGAAGGATATAATTGAGTCTCTGAAAGTTCATTTCAAATCCAAGATTTCGTTAAATCCACTTTTTGTTGACAAGGCTTTGGTCAAATTTGAAGATGATAATGTTTCTAAATCTTTAGACTCTGTTGGAAAATGGAAGGCATTTGGAGACTATCATCTGCTCATTGAAAAATGGTCTAGCAAGATTCATAGTCACCTAAGATTCTTGGAAGGGTATAGTGGATGGATTGCGATCAAGAATTTGAGTTTAAATTTTTGGTGTCGAAAATCTTTTGAAGCAATTGGAGCTTATTTTGGAGGATTAGAAGTCAAACAAGCAATGGAAGATGAAGGGTTTGATTTTCCAATTAAAGATTCACAAGTTGATTATTATGCAGAGATCCAGGAGATTCATTCAATTTCAAGGGATCCTAAGGTTGATGCCTCTTCAGTTGCCCAGCTTCCAAAAATTATTTCAGAAGAAAATTTACTAGTGAGAAATCATATTAGAAATTTTCCCAGTGTGAATGTTAGTGGTGGATTTCCAAGGCTGGTAATAAATGAGAAAGAGAAGGATTCATTAATTTCAAATGGGCTGCATGAAAAGGAAATGTTTTCTGTCGGAAATGTAGATTCCAAGATTCCTTTGCATGATGTATCTTTTGGGAATGATGGTTTTATTGGTGAGCTTTCTAATGGTAATTTGAAAAGTGACTCCAATTTTTCAAAAAATAAGGCTAAACCCTTGATTCCAGTGCAATCCTTGGTTACACTAATTGAAGAACTAAACTCCTCGGTTCTGGAAAATAATGAGGGTACAAAAGGAACAGCCTCTAAAGATGTTTCCGAGTTGAATGCTGATGTTCTGGAAAAAGCTGCCTCTAAGACACTGGTACCTCAGGTTGAAAATTATCAGGACAAAGACATAAGTCAGCAAAAACTTCTGTCCAAGCAACAGTTACATTTACCTCCATTTAAATCTTTCAGCCAATTAGATGTCCCTATACCAGGCTCAAATATCAGTTTAATTAAAGGGGTTATTAGGCCTTCTTCTCCAAAGGAAATGCCATCTACTTTAGAATCAGATGGGAAATCAGACATCAGTATAAGCAGTGAGGATTTGGAAGATCAAATAGTAGAAGAAGAGCCTAACAAAATTGTACTAGAAGAGTCTTTTACGGAAGCCTTTGAAATTCTTTTTTCTGATGTTGTTAATGAACAAGTCATTGATTCCTCTCATTTAGTGGTGCTAGAAGTAAATCCTCCTTCCATTCCCTCCAAATTTTCTTCTCTTATCGAGATGATTGGAAAGCTTGATGTAACCAGCCCAATTGTTCCAAATGAGTTGATTGTCCTCGAGCAAAAGGCAGATAAATCAAATACTGAGTGTGAGCACAGCAGTTAG

Coding sequence (CDS)

ATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGTTTTTGGGGATTCACATTGCTGATTCAAAAATGGAATGTTTGACAGCAAAATTTGGTTGTAAGCAGGGTTCATGGCCTTCTAAATATCTGGGGATTCCTTGGGGGGCAGTTCGAAAGGTTCTCAGTTTTGGCAGCCAGTTATCGAAAGAATCCAACATAAGCTTCATAACTGGAAATACTCTTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAATGTTTGCAAAATCTCTGGATAAGCTTATTCGAGATTTTTTTTTGGAGGGCTCCAAAGGCGAGGGCGTCGTGCAAAATGAAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCATTGGAAATCCCCATCGCCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGGTAATACCCTTTGGCAGCAGCTTATTATTGCTAAATATTATTACTCAAAATCAACTTGTATTTGGCCTAAACATATTCAGAGAGGATCTTTTAAATCTCCTGGGCGCTTTATTTGTTCTACCAGAGATCTTGTTGCTAGTCGTATTCAGAGACGGCTTGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGCGGAGTCTTGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGTTCGGAAGGTACAGTTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTCTTCGTCGAAATTTAAATGATTCGAAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTTCTATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCACTTATGGGAGATATGGTTGGTGATTCTTACCCTAGATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTATTCTTGGAGCTATTTATACGTCTGATCGACTTCAAAGACAAAAGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATCCTTATCATCTATTTGTGCATTGCTCCTTTGCTTTCCGTTATTGGTCTACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTTTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATAGTGTGAAGAAGATCTTTTGGCTTGCTCTTAACCGGGTCTTCCTCTGGTTTCTTTGGGGCGAAAGGAATGGTCGAATTTTCAGGGATTCATTCTCATCTTTTGATAACTTTATGGATTTGATCCTTTTTTATGCTTCATATTGGTGCAAATATCTTCAAGAGGATGATAACCTTTGTTATTCAAATAACTTGATGAATCTGGAACTGAATCTGGGTAATCAGCAGCAACTGAAACTTTTGACAAGCAAAGTCAAAGCGCAACTAGCTATCACCTTGGCCTTCCTCTTCAGATTCCAAGCTTGTAAACTTTCAGAAAGCCAATCATCAACCTTTCTAGGAATAAAAATGAGATCCCTAACGGGCCAGCTACATAGCTCCACACCTTATAGGCAAACTCGCAATGGAGAAAGATGTGGCCAAGGTGTAAGACCTCCTATTACGCGCGTTTGCATAAGGAAGGGCAATCTTGGAAGAAGGGAAAAACAGTTAGAGGATGTGAGGACCACTGGAAATGTGGGAGTGGACGTCAGTTTATTCATGTGCCAAATGGGATCTTCCAAGAAAGGTTGGTTATCTTTTTGGGAGCTGATAGATGATTTCCTCAAGAGTATTAAAGTCCCATTACCATTATCTCATACTTCATCTAAATTTTCATCATCTCTGGTATCTTATTGGATTAGAAAAGATCATGAGGTTTCAAACATCAATTTTGAAGAACTTTGGGTGGTATCTAGATTATTTGCTCATAATAATTGGAAGGATATAATTGAGTCTCTGAAAGTTCATTTCAAATCCAAGATTTCGTTAAATCCACTTTTTGTTGACAAGGCTTTGGTCAAATTTGAAGATGATAATGTTTCTAAATCTTTAGACTCTGTTGGAAAATGGAAGGCATTTGGAGACTATCATCTGCTCATTGAAAAATGGTCTAGCAAGATTCATAGTCACCTAAGATTCTTGGAAGGGTATAGTGGATGGATTGCGATCAAGAATTTGAGTTTAAATTTTTGGTGTCGAAAATCTTTTGAAGCAATTGGAGCTTATTTTGGAGGATTAGAAGTCAAACAAGCAATGGAAGATGAAGGGTTTGATTTTCCAATTAAAGATTCACAAGTTGATTATTATGCAGAGATCCAGGAGATTCATTCAATTTCAAGGGATCCTAAGGTTGATGCCTCTTCAGTTGCCCAGCTTCCAAAAATTATTTCAGAAGAAAATTTACTAGTGAGAAATCATATTAGAAATTTTCCCAGTGTGAATGTTAGTGGTGGATTTCCAAGGCTGGTAATAAATGAGAAAGAGAAGGATTCATTAATTTCAAATGGGCTGCATGAAAAGGAAATGTTTTCTGTCGGAAATGTAGATTCCAAGATTCCTTTGCATGATGTATCTTTTGGGAATGATGGTTTTATTGGTGAGCTTTCTAATGGTAATTTGAAAAGTGACTCCAATTTTTCAAAAAATAAGGCTAAACCCTTGATTCCAGTGCAATCCTTGGTTACACTAATTGAAGAACTAAACTCCTCGGTTCTGGAAAATAATGAGGGTACAAAAGGAACAGCCTCTAAAGATGTTTCCGAGTTGAATGCTGATGTTCTGGAAAAAGCTGCCTCTAAGACACTGGTACCTCAGGTTGAAAATTATCAGGACAAAGACATAAGTCAGCAAAAACTTCTGTCCAAGCAACAGTTACATTTACCTCCATTTAAATCTTTCAGCCAATTAGATGTCCCTATACCAGGCTCAAATATCAGTTTAATTAAAGGGGTTATTAGGCCTTCTTCTCCAAAGGAAATGCCATCTACTTTAGAATCAGATGGGAAATCAGACATCAGTATAAGCAGTGAGGATTTGGAAGATCAAATAGTAGAAGAAGAGCCTAACAAAATTGTACTAGAAGAGTCTTTTACGGAAGCCTTTGAAATTCTTTTTTCTGATGTTGTTAATGAACAAGTCATTGATTCCTCTCATTTAGTGGTGCTAGAAGTAAATCCTCCTTCCATTCCCTCCAAATTTTCTTCTCTTATCGAGATGATTGGAAAGCTTGATGTAACCAGCCCAATTGTTCCAAATGAGTTGATTGTCCTCGAGCAAAAGGCAGATAAATCAAATACTGAGTGTGAGCACAGCAGTTAG

Protein sequence

MASGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMFAKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIWPKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSLRRNLNDSKTNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRDSFSSFDNFMDLILFYASYWCKYLQEDDNLCYSNNLMNLELNLGNQQQLKLLTSKVKAQLAITLAFLFRFQACKLSESQSSTFLGIKMRSLTGQLHSSTPYRQTRNGERCGQGVRPPITRVCIRKGNLGRREKQLEDVRTTGNVGVDVSLFMCQMGSSKKGWLSFWELIDDFLKSIKVPLPLSHTSSKFSSSLVSYWIRKDHEVSNINFEELWVVSRLFAHNNWKDIIESLKVHFKSKISLNPLFVDKALVKFEDDNVSKSLDSVGKWKAFGDYHLLIEKWSSKIHSHLRFLEGYSGWIAIKNLSLNFWCRKSFEAIGAYFGGLEVKQAMEDEGFDFPIKDSQVDYYAEIQEIHSISRDPKVDASSVAQLPKIISEENLLVRNHIRNFPSVNVSGGFPRLVINEKEKDSLISNGLHEKEMFSVGNVDSKIPLHDVSFGNDGFIGELSNGNLKSDSNFSKNKAKPLIPVQSLVTLIEELNSSVLENNEGTKGTASKDVSELNADVLEKAASKTLVPQVENYQDKDISQQKLLSKQQLHLPPFKSFSQLDVPIPGSNISLIKGVIRPSSPKEMPSTLESDGKSDISISSEDLEDQIVEEEPNKIVLEESFTEAFEILFSDVVNEQVIDSSHLVVLEVNPPSIPSKFSSLIEMIGKLDVTSPIVPNELIVLEQKADKSNTECEHSS

Homology

[Close]

BLAST of Spg005285.1 vs. NCBI nr
Match: VVA25489.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 261.5 bits (667), Expect = 3.3e-65
Identity = 155/491 (31.57%), Postives = 234/491 (47.66%), Query Frame = 0


Query: 3    SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
            SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 527  SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 586

Query: 63   ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
            +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 587  K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 646

Query: 123  FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
            F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 647  FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 706

Query: 183  IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
            I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 707  I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 766

Query: 243  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
              GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 767  RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 826

Query: 303  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
             +R+     D   W  D S  FT  SL   +       +   Y  +WK   P K+KIF+W
Sbjct: 827  GVRLFTSRLDKRIWKFDPSGLFTCHSLCSHIQNCGEGETFPPYTQIWKAKTPLKVKIFVW 886

Query: 363  ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
            + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 887  QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 946

Query: 423  SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
               +P   +++ +            KI W +L +  +W LW ERN RIF +         
Sbjct: 947  VWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFENYKGVGVAEL 1006

[Close]

BLAST of Spg005285.1 vs. NCBI nr
Match: VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 261.2 bits (666), Expect = 4.3e-65
Identity = 157/493 (31.85%), Postives = 234/493 (47.46%), Query Frame = 0


Query: 3    SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
            S + IN +K   +GI++ D  +  L   +GC+ G WP  YLG+P G   + + F   + +
Sbjct: 527  SSMKINKSKCSLVGINLDDGLVNELAGAWGCEVGVWPMLYLGLPLGGNPRAIKFWDPVVE 586

Query: 63   ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
            +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 587  K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 646

Query: 123  FFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQ 182
            F  EG  G+   +N   +WE     KF GG+G+G+   R+  L +KW+WRF +E + LW 
Sbjct: 647  FLWEGLDGK---RNHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRFPNEPHALWH 706

Query: 183  QLIIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDS 242
            ++I  +  Y   T  W  K   RGS +SP R I S  +L        +G G    FW D 
Sbjct: 707  KVI--RSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVRVRFWEDD 766

Query: 243  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL 302
            W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  L
Sbjct: 767  WSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITEVARLLDL 826

Query: 303  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIF 362
            L  +R+     D   W +D S  FT  SL   +           Y  +WK   P K+KIF
Sbjct: 827  LEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIF 886

Query: 363  IWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAF 422
            +W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+    
Sbjct: 887  VWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLWETLLQEV 946

Query: 423  EWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFD 482
                 +P   +++ +            KI W +L +  +W LW ERN RIF D       
Sbjct: 947  NTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFEDYKGVGVA 1006

[Close]

BLAST of Spg005285.1 vs. NCBI nr
Match: BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis])

HSP 1 Score: 260.8 bits (665), Expect = 5.7e-65
Identity = 157/510 (30.78%), Postives = 239/510 (46.86%), Query Frame = 0


Query: 3   SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
           SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 470 SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 529

Query: 63  ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
           +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 530 K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 589

Query: 123 FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
           F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 590 FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 649

Query: 183 IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
           I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 650 I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 709

Query: 243 SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
             GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 710 RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 769

Query: 303 SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
            +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W
Sbjct: 770 GVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVW 829

Query: 363 ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
           + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 830 QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 889

Query: 423 SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
              +P   +++ +            K+ W +L +  +W LW ERN RIF D         
Sbjct: 890 VWVIPEGCFELFSIRIDALGRGKKAKVLWGSLMQAVVWNLWLERNRRIFEDYKGVGVAEL 949

Query: 483 MDLILFYASYWCKYLQEDDNLCYSNNLMNL 502
            D + F+A+ W        ++ Y + + NL
Sbjct: 950 WDRVKFWAALWASTSPAFKDVPYPSIMRNL 970

[Close]

BLAST of Spg005285.1 vs. NCBI nr
Match: BBG98819.1 (VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protein 2 [Prunus dulcis])

HSP 1 Score: 260.8 bits (665), Expect = 5.7e-65
Identity = 157/510 (30.78%), Postives = 239/510 (46.86%), Query Frame = 0


Query: 3   SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
           SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 403 SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 462

Query: 63  ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
           +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 463 K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 522

Query: 123 FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
           F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 523 FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 582

Query: 183 IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
           I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 583 I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 642

Query: 243 SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
             GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 643 RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 702

Query: 303 SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
            +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W
Sbjct: 703 GVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVW 762

Query: 363 ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
           + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 763 QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 822

Query: 423 SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
              +P   +++ +            K+ W +L +  +W LW ERN RIF D         
Sbjct: 823 VWVIPEGCFELFSIRIDALGRGKKAKVLWGSLMQAVVWNLWLERNRRIFEDYKGVGVAEL 882

Query: 483 MDLILFYASYWCKYLQEDDNLCYSNNLMNL 502
            D + F+A+ W        ++ Y + + NL
Sbjct: 883 WDRVKFWAALWASTSPAFKDVPYPSIMRNL 903

[Close]

BLAST of Spg005285.1 vs. NCBI nr
Match: BBN67784.1 (VIRB2-interacting protein 2 [Prunus dulcis])

HSP 1 Score: 258.5 bits (659), Expect = 2.8e-64
Identity = 150/471 (31.85%), Postives = 225/471 (47.77%), Query Frame = 0


Query: 3    SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
            SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 1177 SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 1236

Query: 63   ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
            +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 1237 K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 1296

Query: 123  FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
            F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 1297 FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 1356

Query: 183  IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
            I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 1357 I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 1416

Query: 243  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
              GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 1417 RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 1476

Query: 303  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
             +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W
Sbjct: 1477 GVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVW 1536

Query: 363  ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
            + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 1537 QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 1596

Query: 423  SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD 464
               +P   +++ +            K+ W +L +  +W LW ERN RIF D
Sbjct: 1597 VWVIPEGCFELFSIRIDALGRGKKAKVLWGSLMQAVVWNLWLERNRRIFED 1638

[Close]

BLAST of Spg005285.1 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-22
Identity = 103/376 (27.39%), Postives = 156/376 (41.49%), Query Frame = 0


Query: 110 LDKLIRDFFLEGSKGEGVVQN-ENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHE 169
           LD+L R  FL GS  E   Q+   W     PK  GG+G+      N AL+SK  WR L E
Sbjct: 66  LDQLSRT-FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQE 125

Query: 170 GNTLWQQLIIAKYYYSK---STCIWPKHIQRGSFKSPGRFIC-STRDLVASRIQRRLGNG 229
            N+LW  ++  KY+  +   S  + PK    GS+ S  R I    RD+V+  +    G+G
Sbjct: 126 KNSLWTLVLQKKYHVGEIRDSRWLIPK----GSWSSTWRSIAIGLRDVVSHGVGWIPGDG 185

Query: 230 CSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSL--RRNLNDSKT 289
               FW D W+S   L E      R ++       D W+     WD +       N+++ 
Sbjct: 186 QQIRFWTDRWVSGKPLLE-LDNGERPTDCDTVVAKDLWIP-GRGWDFAKIDPYTTNNTRL 245

Query: 290 NEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDSYPR--SSKLYNVVWK 349
              A +  L++  R     D  SW       F+V+S    +  D  PR   +  +N +WK
Sbjct: 246 ELRAVVLDLVTGAR-----DRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWK 305

Query: 350 DVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPS-WCVMCCSDAENPYHLFVHCSFA 409
              P+++K F+W +   A+ T +   R+    HLS S  C +C    E+  H+   C   
Sbjct: 306 VRVPERVKTFLWLVGNQAVMTEEERHRR----HLSASNVCQVCKGGVESMLHVLRDCPAQ 365

Query: 410 FRYWSTIF-----------NAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVF 465
              W  +            + FEW       +YD L            + I W  +  V 
Sbjct: 366 LGIWVRVVPQRRQQGFFSKSLFEW-------LYDNLGD------RSGCEDIPWSTIFAVI 412

[Close]

BLAST of Spg005285.1 vs. ExPASy TrEMBL
Match: M5WJI4 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 9.4e-66
Identity = 155/492 (31.50%), Postives = 234/492 (47.56%), Query Frame = 0


Query: 5   LNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKES 64
           + IN +K   +GI++ D  +  L   +GC+ G+WP  YLG+P G   + + F   + ++ 
Sbjct: 1   MKINKSKCSLVGINLDDGLLNELAGAWGCEVGAWPMSYLGLPLGGNPRAIKFWDPVVEK- 60

Query: 65  NISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRDFF 124
                  N L   K         L+ +   +    + Y+ +F      A  ++KL+RDF 
Sbjct: 61  -----VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFL 120

Query: 125 LEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 184
            EG  G+   +N   +WE     KF GG+G+G+   R+ AL +KW+WRF +E + LW ++
Sbjct: 121 WEGLDGK---RNHAVSWEVVGKAKFCGGLGVGSLRARSAALRAKWLWRFPNEPHALWHKV 180

Query: 185 IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 244
           I  +  Y   T  W  K   RGS +SP R I S  +L        +G G    FW D W 
Sbjct: 181 I--RSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWS 240

Query: 245 SCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSLRRNLNDSKTNEWASLSHLL 304
             GVL E FPRL+ LS +    ++ F   L+    +WD   RRNLN+ +  E A L  LL
Sbjct: 241 RGGVLKEVFPRLFNLSRKQNHNISSF-TGLDGFPLSWDFGFRRNLNELEITEAARLLDLL 300

Query: 305 SSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFI 364
             +R+     D   W +D    FT  S    +           Y  +WK   P K+KIF+
Sbjct: 301 EGVRVFSSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKTPPKVKIFV 360

Query: 365 WELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFE 424
           W+ +LG + T D LQR+ PYL +SP WC +C    E+  H+ +HC F+ + W T+     
Sbjct: 361 WQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHILIHCPFSLKLWETLLKEVN 420

Query: 425 WSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDN 483
               +P   +++ +  F         KI W +L +  +W LW ERN RIF D        
Sbjct: 421 SVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERNRRIFEDYKGVGVAE 480

[Close]

BLAST of Spg005285.1 vs. ExPASy TrEMBL
Match: A0A5E4FED8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035166 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.6e-65
Identity = 155/491 (31.57%), Postives = 234/491 (47.66%), Query Frame = 0


Query: 3    SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
            SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 527  SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 586

Query: 63   ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
            +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 587  K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 646

Query: 123  FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
            F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 647  FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 706

Query: 183  IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
            I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 707  I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 766

Query: 243  SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
              GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 767  RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 826

Query: 303  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
             +R+     D   W  D S  FT  SL   +       +   Y  +WK   P K+KIF+W
Sbjct: 827  GVRLFTSRLDKRIWKFDPSGLFTCHSLCSHIQNCGEGETFPPYTQIWKAKTPLKVKIFVW 886

Query: 363  ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
            + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 887  QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 946

Query: 423  SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
               +P   +++ +            KI W +L +  +W LW ERN RIF +         
Sbjct: 947  VWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFENYKGVGVAEL 1006

[Close]

BLAST of Spg005285.1 vs. ExPASy TrEMBL
Match: A0A5E4GJ11 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035891 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.1e-65
Identity = 157/493 (31.85%), Postives = 234/493 (47.46%), Query Frame = 0


Query: 3    SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
            S + IN +K   +GI++ D  +  L   +GC+ G WP  YLG+P G   + + F   + +
Sbjct: 527  SSMKINKSKCSLVGINLDDGLVNELAGAWGCEVGVWPMLYLGLPLGGNPRAIKFWDPVVE 586

Query: 63   ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
            +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 587  K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 646

Query: 123  FFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQ 182
            F  EG  G+   +N   +WE     KF GG+G+G+   R+  L +KW+WRF +E + LW 
Sbjct: 647  FLWEGLDGK---RNHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRFPNEPHALWH 706

Query: 183  QLIIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDS 242
            ++I  +  Y   T  W  K   RGS +SP R I S  +L        +G G    FW D 
Sbjct: 707  KVI--RSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVRVRFWEDD 766

Query: 243  WLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL 302
            W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  L
Sbjct: 767  WSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITEVARLLDL 826

Query: 303  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIF 362
            L  +R+     D   W +D S  FT  SL   +           Y  +WK   P K+KIF
Sbjct: 827  LEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIF 886

Query: 363  IWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAF 422
            +W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+    
Sbjct: 887  VWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLWETLLQEV 946

Query: 423  EWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFD 482
                 +P   +++ +            KI W +L +  +W LW ERN RIF D       
Sbjct: 947  NTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFEDYKGVGVA 1006

[Close]

BLAST of Spg005285.1 vs. ExPASy TrEMBL
Match: A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.7e-65
Identity = 157/510 (30.78%), Postives = 239/510 (46.86%), Query Frame = 0


Query: 3   SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
           SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 403 SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 462

Query: 63  ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
           +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 463 K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 522

Query: 123 FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
           F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 523 FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 582

Query: 183 IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
           I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 583 I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 642

Query: 243 SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
             GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 643 RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 702

Query: 303 SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
            +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W
Sbjct: 703 GVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVW 762

Query: 363 ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
           + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 763 QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 822

Query: 423 SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
              +P   +++ +            K+ W +L +  +W LW ERN RIF D         
Sbjct: 823 VWVIPEGCFELFSIRIDALGRGKKAKVLWGSLMQAVVWNLWLERNRRIFEDYKGVGVAEL 882

Query: 483 MDLILFYASYWCKYLQEDDNLCYSNNLMNL 502
            D + F+A+ W        ++ Y + + NL
Sbjct: 883 WDRVKFWAALWASTSPAFKDVPYPSIMRNL 903

[Close]

BLAST of Spg005285.1 vs. ExPASy TrEMBL
Match: A0A5H2Y6K0 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_1151S000200 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.7e-65
Identity = 157/510 (30.78%), Postives = 239/510 (46.86%), Query Frame = 0


Query: 3   SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSK 62
           SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + +
Sbjct: 470 SGMTINKSKCSLVGINLDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVE 529

Query: 63  ESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMF------AKSLDKLIRD 122
           +        N L   K         L+ +   +    + Y+ +F      A  ++KL+RD
Sbjct: 530 K------VENRLQKWKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRD 589

Query: 123 FFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQL 182
           F  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++
Sbjct: 590 FLWEGLDGKS-NHAVSWEVVGKAKFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKV 649

Query: 183 IIAKYYYSKSTCIW-PKHIQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWL 242
           I  +  Y   T  W  K   RGS + P R I S  +L        +G+G    FW D W 
Sbjct: 650 I--RSIYGMDTNGWDAKPATRGSCRCPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWG 709

Query: 243 SCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS 302
             GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Sbjct: 710 RGGVLKEVFPRLFNLSRKQNHNISSFASSDGLLLSWDFGFRRNLNELEITEVARLLDLLE 769

Query: 303 SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIW 362
            +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W
Sbjct: 770 GVRLFTSRLDKRIWKFDPSGLFTCHSFCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVW 829

Query: 363 ELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEW 422
           + +LG + T D LQR+ PYL +SP WC +C    ++  HL +HC F+ + W T+      
Sbjct: 830 QAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMAGDSVNHLLLHCPFSLKLWETLLQEVNT 889

Query: 423 SLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNF 482
              +P   +++ +            K+ W +L +  +W LW ERN RIF D         
Sbjct: 890 VWVIPEGCFELFSIRIDALGRGKKAKVLWGSLMQAVVWNLWLERNRRIFEDYKGVGVAEL 949

Query: 483 MDLILFYASYWCKYLQEDDNLCYSNNLMNL 502
            D + F+A+ W        ++ Y + + NL
Sbjct: 950 WDRVKFWAALWASTSPAFKDVPYPSIMRNL 970

[Close]

BLAST of Spg005285.1 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 64.3 bits (155), Expect = 7.2e-10
Identity = 64/266 (24.06%), Postives = 111/266 (41.73%), Query Frame = 0


Query: 206 ICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS- 265
           +C  R +    I   +G+G +  FWHD+W+  G L E    +  L  R+ G   D  V  
Sbjct: 1   MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEV---IGPLGPRTVGLPIDAVVRD 60

Query: 266 --LNSAWDLSLRRNLNDSKTNEWASLSHLLSSIRIRV---IDDTWSWPID---SSNAFTV 325
               ++W ++  R+ N         L +LL   +  +    DD++ W  D    SN F+ 
Sbjct: 61  ALRGTSWWIASSRSRNPI----IVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSA 120

Query: 326 KSLMGDMVGDSYPRSSKL--YNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHL 385
                 +    +P+S  +  +  VW   +  K     W +    ++T DRLQ     +  
Sbjct: 121 PRTWSAL----HPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSI-- 180

Query: 386 SPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFH 445
            P+ C++C +  ++  HLF  C F+   W   F     +L  P  + D L  +       
Sbjct: 181 -PAECLLCNAHDDSRAHLFFECQFSGVVWR--FFTASTNLNPPAQLMDCLNWLLSPSREK 240

Query: 446 SVKKIFWLALNRVFLWFLWGERNGRI 461
           ++  I  LA +   ++ +W ERN R+
Sbjct: 241 NICLIIRLAFHSC-VYAIWRERNQRL 249

[Close]

BLAST of Spg005285.1 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.8e-08
Identity = 46/193 (23.83%), Postives = 77/193 (39.90%), Query Frame = 0


Query: 329 PRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAEN 388
           P  +++   +WK     KIK F+W+L+ GA+ T D L+R+    H     C  CC + E 
Sbjct: 9   PGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNH---PQCHRCCQEDET 68

Query: 389 PYHLFVHCSFAFRYWSTIFNAFE----WSLALPNNIYDVLASIFVGHPFHSVKKIFWLAL 448
             HLF  C +A + W       +      + +   +  +L+S              W+  
Sbjct: 69  SQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWI-- 128

Query: 449 NRVFLWFLWGERNGRIFRDSFSSFDNFMDLILFYASYWCKYLQEDDNLCYSNNLMNLELN 508
               LW LW  RN  +F+    S+ N +         W     ED N    +  +N +++
Sbjct: 129 ----LWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEW-----EDTNTYVQS--LNQQVH 185

Query: 509 LGNQQQLKLLTSK 518
               QQ  +  +K
Sbjct: 189 SSRHQQPTMARTK 185

The following BLAST results are available for this feature:

BLAST of Spg005285.1 vs. NCBI nr


Match Name	E-value	Identity	Description
VVA25489.1	3.3e-65	31.57	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
VVA39726.1	4.3e-65	31.85	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
BBN69746.1	5.7e-65	30.78	VIRB2-interacting protein 2 [Prunus dulcis]	[more]
BBG98819.1	5.7e-65	30.78	VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protei...	[more]
BBN67784.1	2.8e-64	31.85	VIRB2-interacting protein 2 [Prunus dulcis]	[more]

BLAST of Spg005285.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.6e-22	27.39	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg005285.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5WJI4	9.4e-66	31.50	zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg ...	[more]
A0A5E4FED8	1.6e-65	31.57	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]
A0A5E4GJ11	2.1e-65	31.85	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]
A0A4Y1R3V4	2.7e-65	30.78	VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1	[more]
A0A5H2Y6K0	2.7e-65	30.78	VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_1151S000200 PE=4 S...	[more]

BLAST of Spg005285.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04650.1	7.2e-10	24.06	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G25270.1	8.8e-08	23.83	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 315..403 e-value: 3.0E-12 score: 47.1
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 698..786 e-value: 6.7E-7 score: 28.9
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 2..179
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 2..179
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 215..425
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 215..425

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg005285	Spg005285	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34874500..34875952	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34876580..34876678	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34877510..34877778	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34879040..34879183	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34879271..34879665	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34879883..34879991	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34880070..34880137	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34880366..34880681	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34880793..34881272	CDS
Spg005285.1-cds	Spg005285.1-cds-scaffold11:34881545..34881649	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg005285.1	Spg005285.1-protein	polypeptide