Spg005020.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGATCTAAGTCTGGCGGACGACTTGGCCCTGAAAAATCCGGATCCAAGCAACAAAAGGGCCCACAGAAGTTTGCTTCCAAGGCCGGTGGCTGATGTGCGTGCCAAGGTCGGATCTAAGGGAAAGATGAGGGCCCGAATGCAGTCAGGAATTGAGCACGACGATGTCGATCGGGGGCTAAAGTTGCCAAAGTTGAGAAGGGCAGATAAAGAAGACCTAGAGGACTTGATAGGACAAGCAGCTCCACCGTATACCAATGACATCATGGAAGCAGAGGTACCCCAAAAGTTCAAGATACCAAATTTTCAGTAGTGCAATGGCAAGAAGGATCCAGTTCAACACTTAGATACCTACAGATCTTGGATGGATTTCCATGGGGTGTCTAAAGCAACCAAGTGTTGAGCTTTCTTCCTTACTCTAACGGGGATAGCCAGACAGTGGTTCAGAAAGCTACCTCGAAAGTCTATAGGGTCGTTCAAGGAGTTGGCACGGGCCTTTGTCACATAATTCCTTGGAGCAAGAGACCGGCGCAAGCCACAAATCAACCTACTGACCATTAAGCAAAGGCCAGGAGAAAGCCTGCGAGAATATATAACAAGACTCGGCAACGAGGTATTACAAGTGGAAGGATATGATGATGGAGTTGCACTAACAGCTGTTATTTCAGGTTTGCAGGACGAGAAACTTCTAAATTCTATTGGTGAAAATCAGCCAAGCACCTATGTGGAGTTCATGTCTAGGGCACAAAGATATATAAGCACTGAAGAGTTGTTGAAATCAAAGCAGATAGAAAGAGAAGCCCAGAGGATGGTTGTTTTTTATCGAAAAAAAATATAGAGGAAAAAAACGCCAGAGTGATGTGGGGAGCCAAGACCGTGCAAGATATTCCTCTAGTCGAGGCCGAGCAGATCCCAAAGAAGGTCGAGGGCAAGGTGACCTAATGATAGCGAGCATAGCTAGCTATTTTTCCTAATTAATTTAGCTAGTCTTTAATAATAAATTGGCCAAATTTATGCTTTTTATTGTTCTATTTGTAGGAAATATGTATTGGAGCTAAATTGAGAAATTGGGAATGATCGGGTGTTCGAGGCATGAAAAAAGGCCAAAGAAACGAAGTTGGATCGAGTTGGAAGCTTATTAGACTAGTGCAAACCGAGGACCAGCGTCGAGACCCTAGATCTTGGGCGTCTCGACGTTGCACACTTTCCTTCTCTAATTTGGGCGGCAGAAGACACAACGTCGGGACGTTGTGTCAATAGCATCTCGACGCTCTCGCATAATTCCTAATCAGAATGGGCGGTATCGCGACAGCGTCACGACGCTGTCGACTTTTTTTTTTTCTATAAATAGAATGTGATTATGGCTGATGAAGGGGACCTCTTTTGATGCAATTTTGGCCTAAATTCCGACTAATACCTTCTGTGGGAGCTGAAGCAAGTTGGAGGAGCGGATTTCGAAGGCTCGGGTTGTGGAGATCGTGACGGGGACGTGCGGTTTCGGCGACTTAGCGTTTAATCTCTTTTCCCTCTTGATTTTAGTTAGTTTTAATGGCTGATTTAGACTTAGTTTATACCGTAACGCGTTGTATGAATAGCTAAGTTCTTAATCTTAGGGATTGATGTAGCCGTTGGGCAATTTTGGATTGATTTATGGATGTATTTTATGCTTTCATTTATGCATAACGTGTTCTTAATGCTTTCAATTTACCGGCCATAAATTGATTGATGATTGTGTTTGAATCTTGCTCGGGAGAGGGGATTTAACTTAGAAATCGTTATGCATGACTAGGATTAATCTTGAGATCAGGAGATAATAGATAATTCTAGAAATCGTTAAAAAAGACTAACCTTAAAGCCTTGCATGTTAATGAATTTAGATAGGGAAATTGGGTTTATTGCATGTGAGAGGATTATGTATGCTCGGGAGAGGTATGTATGATTGTAGTTTTCCTAGATTTATGAATCATAGCATGTTAAGTATCCATTAATTAATCCATAATCCCAATTGGTGAAATCAACTCCCTAAGACTTTTGCCATCAATTGATTGTCACACTTTTAGCTTTGTGTTAATTTTGTTTCCATTCTCATCAAGCTTAATTCCCTAGATAAAATTGGATTAGAGTATTTACGGTAGTTAAATTGATTAGAAACTCAATCCAGAGGACGACATTCGAATTAAAATTCACTATATTATAACTTGACCCGTACACTTGCTGTAAGCAAAATCGCACATCACTTAAAAGGAAGATTTGAGAAGTACACCCCACTGTCCGTCCCGCCTTATCAAGTCTTAGCAGCAGTGCAGAACATAGATCTGTTGAAGCGCCCAGAAAGACTCAAGACTAATCCAGATAGAAGAAATAAGAACAAGTATTGCATGTTCCACTGTGATCATGGGCACACAACGCGAAATTGCATACAGTTACGAGATGAGATAGAAAGTTTAATCAATGAGGGTTACCTGAAGGAGTTTGTTAACGATGGCAACAATAAAAGACCAGCTAGAAGCGAACGAGGCTAA ATGCCAGATCTAAGTCTGGCGGACGACTTGGCCCTGAAAAATCCGGATCCAAGCAACAAAAGGGCCCACAGAAGTTTGCTTCCAAGGCCGGTGGCTGATGTGCGTGCCAAGGTCGGATCTAAGGGAAAGATGAGGGCCCGAATGCAGTCAGGAATTGAGCACGACGATGTCGATCGGGGGCTAAAGTTGCCAAAGTTGAGAAGGGCAGATAAAGAAGACCTAGAGGACTTGATAGGACAAGCAGCTCCACCGTATACCAATGACATCATGGAAGCAGAGAGTGATGTGGGGAGCCAAGACCGTGCAAGATATTCCTCTAGTCGAGGCCGAGCAGATCCCAAAGAAGGTCGAGGGCAAGATAGGGAAATTGGGTTTATTGCATGTGAGAGGATTATGTATGCTCGGGAGAGCAAAATCGCACATCACTTAAAAGGAAGATTTGAGAAGTACACCCCACTGTCCGTCCCGCCTTATCAAGTCTTAGCAGCAGTGCAGAACATAGATCTGTTGAAGCGCCCAGAAAGACTCAAGACTAATCCAGATAGAAGAAATAAGAACAAGTATTGCATGTTCCACTGTGATCATGGGCACACAACGCGAAATTGCATACAGTTACGAGATGAGATAGAAAGTTTAATCAATGAGGGTTACCTGAAGGAGTTTGTTAACGATGGCAACAATAAAAGACCAGCTAGAAGCGAACGAGGCTAA ATGCCAGATCTAAGTCTGGCGGACGACTTGGCCCTGAAAAATCCGGATCCAAGCAACAAAAGGGCCCACAGAAGTTTGCTTCCAAGGCCGGTGGCTGATGTGCGTGCCAAGGTCGGATCTAAGGGAAAGATGAGGGCCCGAATGCAGTCAGGAATTGAGCACGACGATGTCGATCGGGGGCTAAAGTTGCCAAAGTTGAGAAGGGCAGATAAAGAAGACCTAGAGGACTTGATAGGACAAGCAGCTCCACCGTATACCAATGACATCATGGAAGCAGAGAGTGATGTGGGGAGCCAAGACCGTGCAAGATATTCCTCTAGTCGAGGCCGAGCAGATCCCAAAGAAGGTCGAGGGCAAGATAGGGAAATTGGGTTTATTGCATGTGAGAGGATTATGTATGCTCGGGAGAGCAAAATCGCACATCACTTAAAAGGAAGATTTGAGAAGTACACCCCACTGTCCGTCCCGCCTTATCAAGTCTTAGCAGCAGTGCAGAACATAGATCTGTTGAAGCGCCCAGAAAGACTCAAGACTAATCCAGATAGAAGAAATAAGAACAAGTATTGCATGTTCCACTGTGATCATGGGCACACAACGCGAAATTGCATACAGTTACGAGATGAGATAGAAAGTTTAATCAATGAGGGTTACCTGAAGGAGTTTGTTAACGATGGCAACAATAAAAGACCAGCTAGAAGCGAACGAGGCTAA MPDLSLADDLALKNPDPSNKRAHRSLLPRPVADVRAKVGSKGKMRARMQSGIEHDDVDRGLKLPKLRRADKEDLEDLIGQAAPPYTNDIMEAESDVGSQDRARYSSSRGRADPKEGRGQDREIGFIACERIMYARESKIAHHLKGRFEKYTPLSVPPYQVLAAVQNIDLLKRPERLKTNPDRRNKNKYCMFHCDHGHTTRNCIQLRDEIESLINEGYLKEFVNDGNNKRPARSERG Homology
BLAST of Spg005020.1 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia]) HSP 1 Score: 100.5 bits (249), Expect = 2.0e-17 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Spg005020.1 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 3.4e-17 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of Spg005020.1 vs. NCBI nr
Match: XP_024042801.1 (uncharacterized protein LOC112099618 [Citrus clementina]) HSP 1 Score: 99.4 bits (246), Expect = 4.5e-17 Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of Spg005020.1 vs. NCBI nr
Match: MQL77781.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 99.0 bits (245), Expect = 5.9e-17 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Spg005020.1 vs. NCBI nr
Match: MQL93545.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 99.0 bits (245), Expect = 5.9e-17 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Spg005020.1 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 9.8e-18 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Spg005020.1 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of Spg005020.1 vs. ExPASy TrEMBL
Match: A0A6J1DDR5 (uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020115 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16 Identity = 60/178 (33.71%), Postives = 98/178 (55.06%), Query Frame = 0
BLAST of Spg005020.1 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.1e-16 Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Spg005020.1 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.4e-16 Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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