Spg002662.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg002662.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SWIM-type domain-containing protein
Location	scaffold6: 794283 .. 796608 (-)
Sequence length	1398
RNA-Seq Expression	Spg002662.1
Synteny	Spg002662.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTGTTGCTTGCGATTATGCGAAAGCTATAATGAGAATTACTAACAAGATGCACTGCACGCCGCGTGATATAATTGAATACGCTAAGAAAACCCACGGTGTCATTCTCAGTTACGACAAAGCATGGAGGGGGAGGGAGAAGGCACTGACTGAGTTAAGAGGTTCCCCCGAAGAGTCGTATGCCCGTATTCCAGCATTTGCAGCTAAGTTGATCGAAAAAAACCCAGGTATTTCTCGCTTTTACCTGGATAGTACTACCAGTAAATACTGGTATTTACCAATAGTTTGTTTTCCAACATTTTGTTTCCCCAAAGAGTAGCAATATTAGTAAATACTTATATTTACTAACATTCTGTTTTTCAGGGACGTATACTGCTCAGGAGGTTGATTTGAACGACAGGTTCAAATTCTTTTTTATGAGTATTGCAGCGTCCATCGAGGGTTGGAAATATTGCCTGCCAGTCATTTCGGTGGATGGCACATCACTCAAAAACAGGTTCAATGGTACGCTCCTAACAGCCTGCACATTCGATGGCAACTTACAGATATTCCCACTGGCGTTCTCTATTGTTGACTCCGAAAACGACGCGTCGTGGGAGTGGTTTTTTCAAAATTTGAAAGCAGCTTTTGGAGAACCGAATGATCTTGTTATAGTGTCTAACAGGCACAAGAGCATTGGTAATGGGGTGAGGAAGGTATATACGTCAACGCACCATGGCGTGTGTATCTATCATTTGCTAAGGAACATCAAGTCAGACCATAAGTCGAAGGGGATTGACGAACTGTTTTACAAGTGTGCTAAACCGTACACCATTGGTGAGTTTGAATACTATATGAGGCAGATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATGTATGCACTTTACAATGTTTTTTGGTAAAGTAGTTTTATATTTACGTATACACAGCTAATAATGTCTGGTATTTTGGCGTTAATACGCAGATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAATCCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGACGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

mRNA sequence

GTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAATCCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGACGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

Coding sequence (CDS)

GTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAATCCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGACGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

Protein sequence

VTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTLFRSWSNNPINIIISEDRDVFWMVNGFQNGTYRGCCVVVDIPGVNTGIHPVGTDAGPSRGVWNFDFITADGIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATAAMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGSMRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTPIAR

Homology

[Close]

BLAST of Spg002662.1 vs. NCBI nr
Match: XP_022157216.1 (uncharacterized protein LOC111023978 [Momordica charantia])

HSP 1 Score: 266.9 bits (681), Expect = 3.2e-67
Identity = 124/242 (51.24%), Postives = 170/242 (70.25%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           +EQ++P IR EL+E+GY +W+RAFST  R+ LMTTN+SES+N+   EAR LP+I LL+ I
Sbjct: 4   LEQVVPEIREELQEIGYEKWARAFSTKNRHGLMTTNISESINSTFSEARELPVICLLQNI 63

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           RD +QRWFYERR+  ++Q   IT + A  +R +LK SRTMDIYPVD+  + VH+ ++ F 
Sbjct: 64  RDLMQRWFYERRSFYSYQQIDITPWTANALRSSLKESRTMDIYPVDQYLYDVHNDDRHFN 123

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI + +C  ++W+ D IPC+HAC+AI R+GL + +FVH+FY    LQ +YS NVHPIG 
Sbjct: 124 VNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHPIGQ 183

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           +   +  +  +   + PP  KR AGRP+KKR+  R E   T RCGRC +LGHN+R C  P
Sbjct: 184 IENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRCKNP 243

Query: 463 IA 465
            A
Sbjct: 244 PA 245

[Close]

BLAST of Spg002662.1 vs. NCBI nr
Match: KAA0064137.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 6.2e-63
Identity = 192/700 (27.43%), Postives = 271/700 (38.71%), Query Frame = 0


Query: 1   VTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTLFRSWS 60
           V  +F   W     Y +++   V V   S+ QEF  C+   L       ++RLTL+  + 
Sbjct: 6   VKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFANCIQHRLFPNSEVSVSRLTLYWKYC 65

Query: 61  NNPINIIISEDRDVFWMVNGFQNGTYRGCCVVVD-IPGVNTGIHPVGTDAGPSRGVWNFD 120
           NN   I I +D+DV W++            +VVD  P  + G  P  +   P       +
Sbjct: 66  NNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSDLPRTEDSRSE 125

Query: 121 FITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCV 180
            I  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN   F + C 
Sbjct: 126 NIIIDLNAFESPNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFNIRCK 185

Query: 181 DVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA---------------- 240
           D +CPWY+RA     S I+  RKF++ H CS D V NDH+QAT+                
Sbjct: 186 DPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDK 245

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 246 APCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPG 305

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 306 TYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQ 365

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 366 IVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNVVYEIAEHGLC 425

Query: 421 --------------------------------------AMEQIIPSIRSELEEVGYARWS 464
                                                  ++Q+ PS+R ELE VG  +W+
Sbjct: 426 AFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHELEAVGRHKWA 485

[Close]

BLAST of Spg002662.1 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-60
Identity = 182/649 (28.04%), Postives = 250/649 (38.52%), Query Frame = 0


Query: 52  RLTLFRSWSNNPINIIISEDRDVFWMVNGFQNGTYRGCCVVVD-IPGVNTGIHPVGTDAG 111
           +LTL+    NN   I I +D+DV W++            VV+D  P  + G  P  +   
Sbjct: 50  KLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDIGNTPYMSSEL 109

Query: 112 PSRGVWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSN 171
           P       + +  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN
Sbjct: 110 PRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSN 169

Query: 172 NKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA------- 231
              F + C D SCPWY+RAS +  S IWIVRKF   H CS D V NDH+QAT+       
Sbjct: 170 RTSFDIRCKDPSCPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECT 229

Query: 232 ------------------------------------------------------------ 291
                                                                       
Sbjct: 230 KLIFKTNDKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFS 289

Query: 292 ------------------------------------------------------------ 351
                                                                       
Sbjct: 290 DALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLIS 349

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 350 TCTIDGNSQIVPLPFAVVDSENDLSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAV 409

Query: 412 -----------------------------------------------AMEQIIPSIRSEL 464
                                                           +EQ+ PS+R EL
Sbjct: 410 YEIAEHGLCAFHLLKNLKKNHKSLPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHEL 469

[Close]

BLAST of Spg002662.1 vs. NCBI nr
Match: TYK09853.1 (uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-59
Identity = 118/241 (48.96%), Postives = 163/241 (67.63%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           +EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+ + L E R LP+I LLE I
Sbjct: 209 LEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESMKSTLKEQRELPVIGLLESI 268

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           R  +Q+WFYERR   +FQ T ++ YA   IR++L  SR+M+IYPVD+ +F+VH + +QF 
Sbjct: 269 RSLIQKWFYERRTKWSFQYTQLSIYAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFV 328

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI NR+C+CR+W+ DLIPC+HACIA+  + LN+  +  +FY  S L  +Y     PIG+
Sbjct: 329 VNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGT 388

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           + Q  +T     + + PP  KR AGRPKKKR     E+  + RC RCG+ GHN R+C  P
Sbjct: 389 VNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCKEP 448

Query: 463 I 464
           I
Sbjct: 449 I 449

[Close]

BLAST of Spg002662.1 vs. NCBI nr
Match: XP_008444294.1 (PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-57
Identity = 116/241 (48.13%), Postives = 163/241 (67.63%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           ++Q+ PS+R ELE VG  +W+RAF   KRY +MTTN+SES+N+ L E R LP+I LLE +
Sbjct: 120 LKQLSPSMRHELEAVGRHKWARAFFKRKRYQVMTTNISESMNSTLKEQRELPVIGLLESV 179

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           R  +++WFYERR   +FQ T ++ YA   IR++L+ SR+M+IYPVD+ +F+VH + +QF 
Sbjct: 180 RSLIKKWFYERRTKWSFQRTQLSIYAEDVIRESLRQSRSMNIYPVDQHEFEVHHRKEQFF 239

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI NR+C+CR+W+ DLIPC+HACIA+    LN+  +  +FY  S L  +Y     PIG+
Sbjct: 240 VNILNRTCSCRQWDLDLIPCSHACIALSTGNLNLHLYTDKFYYVSNLINLYKKGTRPIGT 299

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           + Q  +T     + + P   KR AGRPKKKR     E+  T RC RCG+ GH+ R+C  P
Sbjct: 300 VNQIRNTHQGGNDGILPSQVKRPAGRPKKKRFTSFLEKKATVRCSRCGKKGHSCRSCKEP 359

Query: 463 I 464
           I
Sbjct: 360 I 360

[Close]

BLAST of Spg002662.1 vs. ExPASy TrEMBL
Match: A0A6J1DXB4 (uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023978 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-67
Identity = 124/242 (51.24%), Postives = 170/242 (70.25%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           +EQ++P IR EL+E+GY +W+RAFST  R+ LMTTN+SES+N+   EAR LP+I LL+ I
Sbjct: 4   LEQVVPEIREELQEIGYEKWARAFSTKNRHGLMTTNISESINSTFSEARELPVICLLQNI 63

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           RD +QRWFYERR+  ++Q   IT + A  +R +LK SRTMDIYPVD+  + VH+ ++ F 
Sbjct: 64  RDLMQRWFYERRSFYSYQQIDITPWTANALRSSLKESRTMDIYPVDQYLYDVHNDDRHFN 123

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI + +C  ++W+ D IPC+HAC+AI R+GL + +FVH+FY    LQ +YS NVHPIG 
Sbjct: 124 VNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHPIGQ 183

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           +   +  +  +   + PP  KR AGRP+KKR+  R E   T RCGRC +LGHN+R C  P
Sbjct: 184 IENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRCKNP 243

Query: 463 IA 465
            A
Sbjct: 244 PA 245

[Close]

BLAST of Spg002662.1 vs. ExPASy TrEMBL
Match: A0A5A7VAU3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00150 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-63
Identity = 192/700 (27.43%), Postives = 271/700 (38.71%), Query Frame = 0


Query: 1   VTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTLFRSWS 60
           V  +F   W     Y +++   V V   S+ QEF  C+   L       ++RLTL+  + 
Sbjct: 6   VKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFANCIQHRLFPNSEVSVSRLTLYWKYC 65

Query: 61  NNPINIIISEDRDVFWMVNGFQNGTYRGCCVVVD-IPGVNTGIHPVGTDAGPSRGVWNFD 120
           NN   I I +D+DV W++            +VVD  P  + G  P  +   P       +
Sbjct: 66  NNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSDLPRTEDSRSE 125

Query: 121 FITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCV 180
            I  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN   F + C 
Sbjct: 126 NIIIDLNAFESPNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFNIRCK 185

Query: 181 DVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA---------------- 240
           D +CPWY+RA     S I+  RKF++ H CS D V NDH+QAT+                
Sbjct: 186 DPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDK 245

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 246 APCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPG 305

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 306 TYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQ 365

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 366 IVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNVVYEIAEHGLC 425

Query: 421 --------------------------------------AMEQIIPSIRSELEEVGYARWS 464
                                                  ++Q+ PS+R ELE VG  +W+
Sbjct: 426 AFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHELEAVGRHKWA 485

[Close]

BLAST of Spg002662.1 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.8e-61
Identity = 182/649 (28.04%), Postives = 250/649 (38.52%), Query Frame = 0


Query: 52  RLTLFRSWSNNPINIIISEDRDVFWMVNGFQNGTYRGCCVVVD-IPGVNTGIHPVGTDAG 111
           +LTL+    NN   I I +D+DV W++            VV+D  P  + G  P  +   
Sbjct: 50  KLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDIGNTPYMSSEL 109

Query: 112 PSRGVWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSN 171
           P       + +  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN
Sbjct: 110 PRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSN 169

Query: 172 NKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA------- 231
              F + C D SCPWY+RAS +  S IWIVRKF   H CS D V NDH+QAT+       
Sbjct: 170 RTSFDIRCKDPSCPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECT 229

Query: 232 ------------------------------------------------------------ 291
                                                                       
Sbjct: 230 KLIFKTNDKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFS 289

Query: 292 ------------------------------------------------------------ 351
                                                                       
Sbjct: 290 DALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLIS 349

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 350 TCTIDGNSQIVPLPFAVVDSENDLSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAV 409

Query: 412 -----------------------------------------------AMEQIIPSIRSEL 464
                                                           +EQ+ PS+R EL
Sbjct: 410 YEIAEHGLCAFHLLKNLKKNHKSLPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHEL 469

[Close]

BLAST of Spg002662.1 vs. ExPASy TrEMBL
Match: A0A5D3CDB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00210 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.0e-59
Identity = 118/241 (48.96%), Postives = 163/241 (67.63%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           +EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+ + L E R LP+I LLE I
Sbjct: 209 LEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESMKSTLKEQRELPVIGLLESI 268

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           R  +Q+WFYERR   +FQ T ++ YA   IR++L  SR+M+IYPVD+ +F+VH + +QF 
Sbjct: 269 RSLIQKWFYERRTKWSFQYTQLSIYAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFV 328

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI NR+C+CR+W+ DLIPC+HACIA+  + LN+  +  +FY  S L  +Y     PIG+
Sbjct: 329 VNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGT 388

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           + Q  +T     + + PP  KR AGRPKKKR     E+  + RC RCG+ GHN R+C  P
Sbjct: 389 VNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCKEP 448

Query: 463 I 464
           I
Sbjct: 449 I 449

[Close]

BLAST of Spg002662.1 vs. ExPASy TrEMBL
Match: A0A5A7T2S1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00270 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.0e-58
Identity = 118/241 (48.96%), Postives = 162/241 (67.22%), Query Frame = 0


Query: 223 MEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFI 282
           +EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+N+ L E R LPII LLE I
Sbjct: 180 LEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESMNSTLKEQRELPIIGLLESI 239

Query: 283 RDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFE 342
           R  +Q+WFYE R   +FQ T ++  A   IR++L  SR+M+IYPVD+ +F+VH + +QF 
Sbjct: 240 RSLIQKWFYECRTKWSFQRTQLSISAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFV 299

Query: 343 VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSILQKMYSANVHPIGS 402
           VNI NR+C+CR+W+ DLIPC+HACIA+  + LN+  +  +FY  S L  +Y     PIG+
Sbjct: 300 VNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGT 359

Query: 403 MRQDMSTLAVETNIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTP 462
           + Q  +T     + + PP  KR AGRPKKKR     E+  + RC RCG+ GHN R+C  P
Sbjct: 360 VNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCKEP 419

Query: 463 I 464
           I
Sbjct: 420 I 420

The following BLAST results are available for this feature:

BLAST of Spg002662.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157216.1	3.2e-67	51.24	uncharacterized protein LOC111023978 [Momordica charantia]	[more]
KAA0064137.1	6.2e-63	27.43	MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transpo...	[more]
XP_008455803.1	1.0e-60	28.04	PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]	[more]
TYK09853.1	4.2e-59	48.96	uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]	[more]
XP_008444294.1	1.0e-57	48.13	PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]	[more]

BLAST of Spg002662.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg002662.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXB4	1.6e-67	51.24	uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5A7VAU3	3.0e-63	27.43	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3C300	4.8e-61	28.04	uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=...	[more]
A0A5D3CDB8	2.0e-59	48.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T2S1	5.0e-58	48.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Spg002662.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 348..375 e-value: 8.4E-4 score: 27.5
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 134..197 e-value: 1.7E-10 score: 40.7
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 342..365 e-value: 5.2E-4 score: 19.6
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 341..373 score: 9.383839
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..438
None	No IPR available	PANTHER	PTHR31973:SF137	OS02G0192200 PROTEIN	coord: 240..463
None	No IPR available	PANTHER	PTHR31973:SF137	OS02G0192200 PROTEIN	coord: 112..220
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 240..463
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 112..220
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 445..459 score: 8.762648

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg002662	Spg002662	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg002662.1-cds	Spg002662.1-cds-scaffold6:794283..794711	CDS
Spg002662.1-cds	Spg002662.1-cds-scaffold6:794802..795104	CDS
Spg002662.1-cds	Spg002662.1-cds-scaffold6:795943..796608	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg002662.1	Spg002662.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding