Spg002442.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGACCTAAACGACGTCGTTCTTTTCCTCTTCTCCGGACGGCTCGCCGTTCCGCACGCTCCGGCTCCGCATTCTTCTTCCAGCAGTTCATAAATTTCAGGGAAAGAAGAAGAAGAAGAAGAAACGGGAAGAATTAAACATCGAAAGTTCAAAACGAGGGGTTGTCGCCAAAAGGGGTCGTGATTTTTCCACCGTTCATTAATTATTATGGCGGACAAGAACAGGAGAGGCTCTCCGCCATTCGGCCAATTATGGCGTCTCATTTCCCCTTGATTTCCTCACTCGAGTTTTAACCTTTTTTCTATTTATTTTTGAGTCTATGGTGTTTCCCTTTTGAGATGTGTGTGAGTTATGGTTGCGATTGGGGGAATTTCGTTGCCGGGATTTGTGCCGCCGCCGCTCCACCGTCAATCTTTCTCGCCGCCGGCAATTGGGTTCGCGAGGTTTCCCGATCGGGTTAGCTTCAGATCGACGGTGGTTTCAATGGATGGGGTTGAGAAGAAGGGTTCGAGGGCGGTGATTGTTAGTGGGAAGGTTGATGGTTTGGGTAAGAATGAATGTGAGGCTGAGTTCGATGCTAACTTGGGCAATGGACATGCTGGGAACTCTGGTATTGCTTCAATTTTGATGTCTTTTTCTATCTTCTTGATTCAGGGACTTGATTTTGGTTGAATTGGAATATTTGTTTTGTTTTGTTCTTTTTGAAATTATGGGTTTTTGTTTTGGTTCTTGAGATGTTTAATGTAATGTAAGATGTGGGACCTTCTCTTTGAACCATCTCATTGACATTTCTCGTGTTATTGTTGTCTTGCTTGATTCATCAGATAGTGGAAATAAAATCATTGGAATAGCAAGAACCTTATTATTTGTATTTATGTTGATATTGGTTATATTCTTATCGACATTTTCAATATTTTATCTACATATTTACAATATGATGTTGAACTCTTTGATTTATTGAAATTCCTGATTTAGTTGCAGAACATTTGAATTGTTTCTATGTTGACATAGGCTTATAAAGTGGTGGTATCTAATGTTTGTTCTTCATGGTGCGAGTTTCTCTTCTTTGGTTTAAGCTGTCCAGACTACTAACATGCTTTTTAATCAGGAAAAAATCAATCAGTGTTGTCCACAGTAGGAAATTCTACCAATATCAAGTGGCATGAATGTTCAGTTGGAAATGTTGAAAGACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGTTTGTGATTTAATATTTTCCTATTGCTTTTACACCTTAGTTGTTTTTGTTATTATCTAGTAATCATGGTTTAGAGAACCTATAGTTTAGATTGTCTTCAAATGAAATTATTCGTGGAGTTGGGGTATTCATTGGTTAGGCTGGGTTTGAACTCGACTCAATTCTTTTGGTTAAGAAAAAAAAAAGTGAAAAATATGGTTTAAATGTTGGCTTAAAATATTTAAGTTGGGTTTAGGACTTTTTCGACCTGACCCAATATTTCTAAATATGCTTAGCTAACTTGCAGGGAAGAGCTCTGTGGCCTGTGCCTTGAGTCAAAGCTTATACAAAAAGGGAAAGTTGGCTTATGTTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAACATAAGGAGGGTCGGTAAGTCCTGCTTGGGAAGTTCAGTTCATTTACAACACTTTAGATTGAGCTGTTGATGATTGCTAATTGTACCTCTTCCATAAATTAGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCTCCGTATCGAAGGGATCGAGATGCATGTCGTTCCATTTTGCCTGATGGAAATTTTATTGAGGTATTTCTTCATTTATATGCATACCATAGATTTTGAGCAGGCTTCTATTTTACCTTGCTTCTGAAATGTGTATGATAAATATGTGCTAAAAATATATAGGTGTTTATGGATGTTCCTCTTGAAGTTTGCGAAGCAAGAGATGCGAAAGGACTGTATAAGCTTGCACGAGCGGGGAAGATCAAAGGTTACTGCAACTTGTTATCATCTAGAGTTAATTGATGATTTTGTTGATTTTCACTTATTTTGTTAGTATAATTTGAGTATTAGTTTAATCTTATTTTGGCCTTGAACTTTCACAACCTAAATTTTGACTCAAAGTTGTTATCAAGTGGGCTTAACTATTCTCCGAATTATCATAGTTCATCTGAACAAAATCTCATACTTTTGCAGGCTTTACCGGTATTGACGATCCATATGAAGTACCATTGAATTGTGAGGTAATTCCAAATTCTGGAGGATAATGGAACATCTCTTTTAAACAACTTGCAAAAGATCCATGCTTCTACTACATGAGAGTGAATGTTGTTGCAACAAATGCTGATGTTTGGTTAAAGAATGGAGAAGACTAATGAATATAACTGGTTGTGTTGTGAATGATACATTGTTTAGGCTCTTTTGAAATTTTGTGTTTCATTAAAAATGGATCATCTCTTTTAAACAAGTTACAAAAGATTAATGCTTCTACTACTATTTAAGGACTGAAAATTTTTGCAACATATTTTGATGTTTAGTTAAAGAATGAAGAATAATGAAATATAACTAGTTGTGTTATGAATGTTACATTGTTTTTGAAGCTGATTTGAAGACCCTTTTGAACTTTTTGGGTTTCAGATAGTACTGAAACACAATGGAGGTTCCCCATGTGATATGGCTGAGAAAGTGATGAGTTACCTTGAGGAGAAGGGCTTCCTGCAGGCTTAACTCAAACTCTATGAGAAAAGGGGTTTTAACAACTGAAGTTTTGGTTCAAAATTTTACTATATTTTAGAGCAAATCCAGTTAACTAAAGTTTTGGCTTTGCCTTTTGTTTTGTTACGTCTAATTTGCTTCTTCTTTGTCCACATCTTTTTCTGGATACAGATAGGAATGAAGGTTTGGCGTAGAATGTTGTCTGAAAAGGGTTGGATGTGATGATAGATCATCCATTCACTTTGCTATTTTTTGTCTTCTTTGATCTCTGTAATGTAGAGTTGTTTGAAACAGGGTTGAATGTTCTACACAAAGGAATGTATTAAATATTTTTGTTGAAGCCACAAGTCAATCTCTCTCCCTCATATCAAAT ATGGTTGCGATTGGGGGAATTTCGTTGCCGGGATTTGTGCCGCCGCCGCTCCACCGTCAATCTTTCTCGCCGCCGGCAATTGGGTTCGCGAGGTTTCCCGATCGGGTTAGCTTCAGATCGACGGTGGTTTCAATGGATGGGGTTGAGAAGAAGGGTTCGAGGGCGGTGATTGTTAGTGGGAAGGTTGATGGTTTGGGTAAGAATGAATGTGAGGCTGAGTTCGATGCTAACTTGGGCAATGGACATGCTGGGAACTCTGGAAAAAATCAATCAGTGTTGTCCACAGTAGGAAATTCTACCAATATCAAGTGGCATGAATGTTCAGTTGGAAATGTTGAAAGACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGGAAGAGCTCTGTGGCCTGTGCCTTGAGTCAAAGCTTATACAAAAAGGGAAAGTTGGCTTATGTTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAACATAAGGAGGGTCGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCTCCGTATCGAAGGGATCGAGATGCATGTCGTTCCATTTTGCCTGATGGAAATTTTATTGAGGTGTTTATGGATGTTCCTCTTGAAGTTTGCGAAGCAAGAGATGCGAAAGGACTGTATAAGCTTGCACGAGCGGGGAAGATCAAAGGCTTTACCGGTATTGACGATCCATATGAAGTACCATTGAATTGTGAGATAGTACTGAAACACAATGGAGGTTCCCCATGTGATATGGCTGAGAAAGTGATGAGTTACCTTGAGGAGAAGGGCTTCCTGCAGGCTTAA ATGGTTGCGATTGGGGGAATTTCGTTGCCGGGATTTGTGCCGCCGCCGCTCCACCGTCAATCTTTCTCGCCGCCGGCAATTGGGTTCGCGAGGTTTCCCGATCGGGTTAGCTTCAGATCGACGGTGGTTTCAATGGATGGGGTTGAGAAGAAGGGTTCGAGGGCGGTGATTGTTAGTGGGAAGGTTGATGGTTTGGGTAAGAATGAATGTGAGGCTGAGTTCGATGCTAACTTGGGCAATGGACATGCTGGGAACTCTGGAAAAAATCAATCAGTGTTGTCCACAGTAGGAAATTCTACCAATATCAAGTGGCATGAATGTTCAGTTGGAAATGTTGAAAGACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGGAAGAGCTCTGTGGCCTGTGCCTTGAGTCAAAGCTTATACAAAAAGGGAAAGTTGGCTTATGTTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAACATAAGGAGGGTCGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCTCCGTATCGAAGGGATCGAGATGCATGTCGTTCCATTTTGCCTGATGGAAATTTTATTGAGGTGTTTATGGATGTTCCTCTTGAAGTTTGCGAAGCAAGAGATGCGAAAGGACTGTATAAGCTTGCACGAGCGGGGAAGATCAAAGGCTTTACCGGTATTGACGATCCATATGAAGTACCATTGAATTGTGAGATAGTACTGAAACACAATGGAGGTTCCCCATGTGATATGGCTGAGAAAGTGATGAGTTACCTTGAGGAGAAGGGCTTCCTGCAGGCTTAA MVAIGGISLPGFVPPPLHRQSFSPPAIGFARFPDRVSFRSTVVSMDGVEKKGSRAVIVSGKVDGLGKNECEAEFDANLGNGHAGNSGKNQSVLSTVGNSTNIKWHECSVGNVERQSLLKQKGCVIWITGLSGSGKSSVACALSQSLYKKGKLAYVLDGDNVRHGLNRDLGFKAEDRAENIRRVGEVAKLFADAGVICIASLISPYRRDRDACRSILPDGNFIEVFMDVPLEVCEARDAKGLYKLARAGKIKGFTGIDDPYEVPLNCEIVLKHNGGSPCDMAEKVMSYLEEKGFLQA Homology
BLAST of Spg002442.1 vs. NCBI nr
Match: XP_038903366.1 (adenylyl-sulfate kinase 3-like [Benincasa hispida]) HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150 Identity = 265/296 (89.53%), Postives = 278/296 (93.92%), Query Frame = 0
BLAST of Spg002442.1 vs. NCBI nr
Match: XP_022984565.1 (adenylyl-sulfate kinase 3-like [Cucurbita maxima]) HSP 1 Score: 528.9 bits (1361), Expect = 2.9e-146 Identity = 258/297 (86.87%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Spg002442.1 vs. NCBI nr
Match: XP_022943061.1 (adenylyl-sulfate kinase 3-like [Cucurbita moschata]) HSP 1 Score: 525.4 bits (1352), Expect = 3.2e-145 Identity = 256/297 (86.20%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Spg002442.1 vs. NCBI nr
Match: XP_023515167.1 (adenylyl-sulfate kinase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.0 bits (1351), Expect = 4.2e-145 Identity = 258/298 (86.58%), Postives = 275/298 (92.28%), Query Frame = 0
BLAST of Spg002442.1 vs. NCBI nr
Match: XP_022985087.1 (adenylyl-sulfate kinase 3-like [Cucurbita maxima]) HSP 1 Score: 522.7 bits (1345), Expect = 2.1e-144 Identity = 256/296 (86.49%), Postives = 274/296 (92.57%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy Swiss-Prot
Match: Q43295 (Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK1 PE=1 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 3.6e-99 Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy Swiss-Prot
Match: O49204 (Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus OX=4058 GN=AKN PE=2 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 4.2e-92 Identity = 172/245 (70.20%), Postives = 200/245 (81.63%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy Swiss-Prot
Match: O49196 (Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK2 PE=1 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.7e-88 Identity = 152/199 (76.38%), Postives = 174/199 (87.44%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy Swiss-Prot
Match: Q9SRW7 (Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana OX=3702 GN=APK3 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87 Identity = 154/206 (74.76%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy Swiss-Prot
Match: Q84JF0 (Adenylyl-sulfate kinase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK4 PE=1 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 8.9e-82 Identity = 144/217 (66.36%), Postives = 175/217 (80.65%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy TrEMBL
Match: A0A6J1J8X7 (Adenylyl-sulfate kinase OS=Cucurbita maxima OX=3661 GN=LOC111482821 PE=3 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146 Identity = 258/297 (86.87%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy TrEMBL
Match: A0A6J1FQP4 (Adenylyl-sulfate kinase OS=Cucurbita moschata OX=3662 GN=LOC111447912 PE=3 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145 Identity = 256/297 (86.20%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy TrEMBL
Match: A0A6J1J3W8 (Adenylyl-sulfate kinase OS=Cucurbita maxima OX=3661 GN=LOC111483165 PE=3 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 1.0e-144 Identity = 256/296 (86.49%), Postives = 274/296 (92.57%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy TrEMBL
Match: A0A1S3BYH9 (Adenylyl-sulfate kinase OS=Cucumis melo OX=3656 GN=LOC103494812 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 5.0e-144 Identity = 257/296 (86.82%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of Spg002442.1 vs. ExPASy TrEMBL
Match: A0A6J1E450 (Adenylyl-sulfate kinase OS=Cucurbita moschata OX=3662 GN=LOC111430457 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 5.0e-144 Identity = 256/296 (86.49%), Postives = 272/296 (91.89%), Query Frame = 0
BLAST of Spg002442.1 vs. TAIR 10
Match: AT2G14750.1 (APS kinase ) HSP 1 Score: 362.8 bits (930), Expect = 2.5e-100 Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of Spg002442.1 vs. TAIR 10
Match: AT4G39940.1 (APS-kinase 2 ) HSP 1 Score: 327.4 bits (838), Expect = 1.2e-89 Identity = 152/199 (76.38%), Postives = 174/199 (87.44%), Query Frame = 0
BLAST of Spg002442.1 vs. TAIR 10
Match: AT3G03900.1 (adenosine-5'-phosphosulfate (APS) kinase 3 ) HSP 1 Score: 324.7 bits (831), Expect = 7.7e-89 Identity = 154/206 (74.76%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of Spg002442.1 vs. TAIR 10
Match: AT5G67520.1 (adenosine-5'-phosphosulfate (APS) kinase 4 ) HSP 1 Score: 305.1 bits (780), Expect = 6.3e-83 Identity = 144/217 (66.36%), Postives = 175/217 (80.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|