Spg002412.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg002412.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	polyadenylate-binding protein-interacting protein 12
Location	scaffold6: 251604 .. 255708 (-)
Sequence length	1371
RNA-Seq Expression	Spg002412.1
Synteny	Spg002412.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGGGAAGGGAAGGATGGGGTGTACGAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAAAACAAAAGCCACTCCACCGCAATCCGACGATCCGATTCTCAACGCCCGACGTACACTCTTCTCTCTCTCTTTCTACACTAGCATCGCCACCATAACTTTTTTTTTTCTTTTTCTTTGAATTTGTTTAATTTTGATTTTGATTCAAGCGGAAACTCAGACTTGGGCTTTACTTTTGTTCATTCGCAGAGAGGGTTTTTCGTTTTCGTTTCGATCCTCTGCAATTTCATTTTTGCTCTCTTACTTCTTCTACTCCACGATCTCCTGCTGGGTTTGGTCGTTTACCAATGGAAATGTATTAGATAACCCCTGCCCCTCTCAGGTAACAGGCAACCACTTCTTTGACCGCTCTTTTTCTTTCTTTTTTTTTTTTTGTTTTGTCTTTCCCATGAAAATCTTGATCATTCGATTCATTTGATTTTTCAGAATAAGATTGGAAAATAACGATCTTGATATCCCAAACCTGTCTCTCATCATGGCCGTTCCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAATAACATGGTTCCCTCCGATTCTAATGAGCCCAAGGATGTTGAAAATCAGAAGCCCAAGAACGATTCTACGGTTCCGATGAATGGAGAACCCGACTTTCATCCCAACGGTAATGATCAGAATATACAGAAGAAGGCGCAGCTTCAGGAGAGAGCTGCTGCTGCAACTTCCTTTTCACTTCCTTCAGCCAATTTCAAGGCTCAAATGGGCCAGATGCCGAACGGCTTTGACGCTAATGGCCAGTCGCTGATGGTCAAGTCTGCAGCCGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAATGGAGCGGATGGAGGTGAAAACTTTAAGAGGGACATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCGCTTGCCAAAAATTTCTCTGGTTACTTCGGCGCCGGTGGGCTTGGGTATACTAACGACTTTCTGTTGCAAGCTAATTCTGTCAACAACGAAGGGAATAATAATCGAAGGGTATGTCGAGATTTTGGTTGTTTTGAAAAAAGTGGAAATGTTATTTATACGATTATTAAGCTTTGAATGCCGTGCACTTTATTTTGATTTCTGGAGAACAAAACCCCTCAGACTAAACACGTCTGATGGTTTTGTAGGGTGAAGTGTTGGAGTTTTTGTATGTTTTAGGTGTTCTGTCTTTAGGTTTGTAGGGTTGTGAAGTGCCGTAAACCTGCTAGAACAGCAGCTGTATTATGTATTATTTGATTGCAGATTCACATTTTAGGATCAATGGATTGTAGAGAAATCTATTCTATTTCTTTCTTTTATGTTGAATGAGTCTCCTGTTGATTTGGATTCTTTTGTTTCCTTTATTCTTTTCGATTAGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGAATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAACAGGCAAGAGCCCTCCCCTAAAAGAAAAAAACTCCTGATTATATGCATTGCCCTTGTCCTTTCTTGACCTATTCATTTTTTGATAATGGAATTGCCATGTTCTGATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTAACGGGTTATTCTTTTTTCCTTTTTTACCCATTTGATATGATTCTTGGCATTTTACTGCTAGCTTAATGTCATGTCTTTTTCAAAAGGTTGTTGACTGTCGCATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATCGAGTTCACCGATGAAGGTACAATCCCAAGCTCAAGCTCATCTATATATTCATAGATGCATTTCCTACTTGCTATCATATCTAATTTGCTTCATGCTAGCAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTTAATCCTGACTTTTTACCCAGGGTAATTAACCATCCTCAATGTCATTCATCTATTTTTACTGCATTCTAATTTGAACCTAGGATGCCCAAACCTACTACATTCTAATTTGTTGTTGTTGGTTATCAATTTACTCAACTTCTTTCCTTGAAACTGGTTTTCTTGTGTTTTATTGCATTTAGTCGGACGACGAACGGGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTATGTTTGGAAGTGAAAAATCTTCCGAATGTATTTGAGAACTGTGTTTCTTTGAAGAGGAGAAGATGAAAGAACTTCAATATGTTCAATTGCTATATTGACTGTTTTCATGTCATGTCATGTAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGCACTTCCTCTTATAACAAATGCCACATTTTTCAGACTTTTATTTGAATGTCTTTACAGTCCTTTTATGTTCTCTGGTTGTGACTTAATGCATGTCATCTGATAACCTTGTGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAATTTACAATGGTAATCTTGTTCTCTTCCGTTGATTTTGTTACTTTCCTTTTATGTAACCTTTTCTCCGGCTATGCTTACACCTTTTTCTTTTCTTTGGGGATGAGGGAAAGATATAGGATAATATAGAGGGGCAGTGAGGCTGGATGTGGTTTGCCTTATTAACCAGTCTGTTGCATTTCTGGAATTTACCGTTCACTAATACATCTTTGCTTTTGTGGTGTTGGTGTATAGTATGCATTCAGAGTATCTGCTTTCTATTCGTAAACTTAGTAATGGGCAGCACTTGATTGATAGCGCTTTAAGATGCATTTCACTCCTTTCGAGCAATGCCAAATATCTTTGCAATGCATGTTTCATCTTTTAAAATCATCTAATATGTGATTCTTTTCATTCGAGGTACTAGTGTTTGTGAATAACAACGCATTAGCTATGCCCTAAAAGTCTTTCTAGAGAACAGTTACATGAATGTTCTTGTGTTTGGCTGTAACTTCACCATAGCTTTGCGTAACCATATTAGCATTTGTTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTATTATAGCTCATTCTTGTTTCCTTTTCTGGTATCCAGTATTTTGAAAAATGCATCGTGTTTTTGTTTGAAAAAGTATAACCATTCTGATTCTTATGGGTTTGTTTTCAGGGTGAGCCCATCAAAGACCCCGGTTCGTCCTCGCTCTCCTCGTGCTCAGCTGAATTGAATGCTTCCTGCATCTATCCCATGTCGGCCTGGTGCCCGATAGATATATTTATATATATTGCATATATATATTATGGTTATAGAGATATGTCCAGAAGGGGTTGTGGGCTTTGGTGATGCATGATCCTCCGCAGTGGAGTTGGTACCTTTTGGTACCTAGAACTAGAAGGTGTTGTTGGTCAATGAGATATTTGTTTAGTTTTTTATAGAGTGGATGGCATTTTGAGGCTCGTAGTCGTTTATCTCTGATGATGTTATGATGGATGGACAGCCGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTGCTTTCAATGTTTCTAACTGGAAACTCTCTTAATCAACTCTCCTCTCTTTAGTCTCTTCCTTTGAGCGAGTCTTTCATCATCATCTGCATTCTGGATGCTCTCTGTTTGTTTTGTTCATTCTTCTTCTGCCTGCTACATAGATACTAGATGTTGATAAATGACCCATGTGAAAGAAGTTGATTGTCAGTCTGCCCATGTTGAAAGTTCCCATCATTGTTTTCCCTTTCCAACAGCTGAATCGTTCGGTGGTTTGGAATATTTTGAAGCGAGGGTGGAGGAGGAGGCCGGTATTGATATTAAAAACTTGATCTTTGTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGTTGAGGGGAAGGGAAGGATGGGGTGTACGAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAAAACAAAAGCCACTCCACCGCAATCCGACGATCCGATTCTCAACGCCCGACAATAAGATTGGAAAATAACGATCTTGATATCCCAAACCTGTCTCTCATCATGGCCGTTCCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAATAACATGGTTCCCTCCGATTCTAATGAGCCCAAGGATGTTGAAAATCAGAAGCCCAAGAACGATTCTACGGTTCCGATGAATGGAGAACCCGACTTTCATCCCAACGGTAATGATCAGAATATACAGAAGAAGGCGCAGCTTCAGGAGAGAGCTGCTGCTGCAACTTCCTTTTCACTTCCTTCAGCCAATTTCAAGGCTCAAATGGGCCAGATGCCGAACGGCTTTGACGCTAATGGCCAGTCGCTGATGGTCAAGTCTGCAGCCGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAATGGAGCGGATGGAGGTGAAAACTTTAAGAGGGACATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCGCTTGCCAAAAATTTCTCTGGTTACTTCGGCGCCGGTGGGCTTGGGTATACTAACGACTTTCTGTTGCAAGCTAATTCTGTCAACAACGAAGGGAATAATAATCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGAATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGCATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATCGAGTTCACCGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTTAATCCTGACTTTTTACCCAGGTCGGACGACGAACGGGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAATTTACAATGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCATCAAAGACCCCGGTTCGTCCTCGCTCTCCTCGTGCTCAGCTGAATTGA

Coding sequence (CDS)

ATGTTGAGGGGAAGGGAAGGATGGGGTGTACGAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAAAACAAAAGCCACTCCACCGCAATCCGACGATCCGATTCTCAACGCCCGACAATAAGATTGGAAAATAACGATCTTGATATCCCAAACCTGTCTCTCATCATGGCCGTTCCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAATAACATGGTTCCCTCCGATTCTAATGAGCCCAAGGATGTTGAAAATCAGAAGCCCAAGAACGATTCTACGGTTCCGATGAATGGAGAACCCGACTTTCATCCCAACGGTAATGATCAGAATATACAGAAGAAGGCGCAGCTTCAGGAGAGAGCTGCTGCTGCAACTTCCTTTTCACTTCCTTCAGCCAATTTCAAGGCTCAAATGGGCCAGATGCCGAACGGCTTTGACGCTAATGGCCAGTCGCTGATGGTCAAGTCTGCAGCCGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAATGGAGCGGATGGAGGTGAAAACTTTAAGAGGGACATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCGCTTGCCAAAAATTTCTCTGGTTACTTCGGCGCCGGTGGGCTTGGGTATACTAACGACTTTCTGTTGCAAGCTAATTCTGTCAACAACGAAGGGAATAATAATCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGAATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGCATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATCGAGTTCACCGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTTAATCCTGACTTTTTACCCAGGTCGGACGACGAACGGGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAATTTACAATGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCATCAAAGACCCCGGTTCGTCCTCGCTCTCCTCGTGCTCAGCTGAATTGA

Protein sequence

MLRGREGWGVRKFHLIGHFWDAVKGGPKNKSHSTAIRRSDSQRPTIRLENNDLDIPNLSLIMAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

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BLAST of Spg002412.1 vs. NCBI nr
Match: KAG6574264.1 (Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 752.7 bits (1942), Expect = 1.9e-213
Identity = 399/483 (82.61%), Postives = 414/483 (85.71%), Query Frame = 0


Query: 1   MLRGR-EGWGVRK--FHLIGHFWDAVKGGPKNKSHSTAIRRSDSQRP------------- 60
           MLR R +G G RK  FHLIGHFWDAV      +S    +    +  P             
Sbjct: 1   MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGIHNP 60

Query: 61  ----TIRLENNDLDIPNLSLIMAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPK 120
                I L+NN L  P LSLIMAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP 
Sbjct: 61  CPPLRITLQNNRLFTPTLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPN 120

Query: 121 NDSTVPMNGEPDFHPNGNDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANG 180
           +DSTVPMNGEPDFH NGND ++Q KAQLQERAA A SFSLPSANFK QM QMPNGF+AN 
Sbjct: 121 SDSTVPMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMPNGFEANA 180

Query: 181 QSLMVKSAAGYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNF 240
           Q+LMVKSAAGYGMNQRPNGVINGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSLAKN 
Sbjct: 181 QTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNL 240

Query: 241 SGYFGAGGLGYTNDFLLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTV 300
           SGYFGAGGLGYTNDFLLQANSVNNEG+ NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTV
Sbjct: 241 SGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTV 300

Query: 301 Y-------VTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTV 360
           Y       VTEELLATVFA CGEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTV
Sbjct: 301 YVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTV 360

Query: 361 LGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCG 420
           LGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCG
Sbjct: 361 LGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCG 420

Query: 421 EVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 457
           EVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA
Sbjct: 421 EVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 480

[Close]

BLAST of Spg002412.1 vs. NCBI nr
Match: XP_038900938.1 (polyadenylate-binding protein-interacting protein 12 [Benincasa hispida])

HSP 1 Score: 729.2 bits (1881), Expect = 2.2e-206
Identity = 373/402 (92.79%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAV ENVGPKIGSPSQSLEN MV SDSN+PKDVENQKPKNDST+PMN EPDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQSLENTMVSSDSNDPKDVENQKPKNDSTLPMNAEPDFHPNANDQN 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
           +QKK  LQERAAAATSFSLPS NFKAQMGQM NGF+ NGQSLMVKSA+GYGMNQRPNGVI
Sbjct: 61  MQKKVHLQERAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYFG  GLGYT+DFLLQANS
Sbjct: 121 NGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTSDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           VNNEGNN+RRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY       VTEELLATVFASC
Sbjct: 181 VNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. NCBI nr
Match: XP_023542023.1 (polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726.5 bits (1874), Expect = 1.4e-205
Identity = 375/418 (89.71%), Postives = 386/418 (92.34%), Query Frame = 0


Query: 46  IRLENNDLDIPNLSLIMAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTV 105
           I L+NN L    LSLIMAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP +DSTV
Sbjct: 217 ITLQNNHLFTTTLSLIMAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTV 276

Query: 106 PMNGEPDFHPNGNDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMV 165
           PMNGEPDFH NGND ++Q KAQLQERAA A SFSLPSANFK QM QM NGF+AN Q+LMV
Sbjct: 277 PMNGEPDFHSNGNDHDVQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMV 336

Query: 166 KSAAGYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFG 225
           KSAAGYGMNQRPNGVINGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSL KN SGYFG
Sbjct: 337 KSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFG 396

Query: 226 AGGLGYTNDFLLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY---- 285
           AGGLGYTNDFLLQANSVNNEG+ NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY    
Sbjct: 397 AGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDI 456

Query: 286 ---VTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYP 345
              VTEELLATVFA CGEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYP
Sbjct: 457 DQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYP 516

Query: 346 VRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRL 405
           VRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRL
Sbjct: 517 VRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRL 576

Query: 406 RLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           RLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 577 RLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 634

[Close]

BLAST of Spg002412.1 vs. NCBI nr
Match: XP_022945958.1 (polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata] >XP_022945959.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 717.2 bits (1850), Expect = 8.8e-203
Identity = 367/402 (91.29%), Postives = 377/402 (93.78%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP +DSTVPMNGEPDFH NGND +
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
           +Q KAQLQERAA A SFSLPS NFK QM QMPNGF+AN Q+LMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSLAKN SGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           VNNEG+ NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY       VTEELLATVFA C
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. NCBI nr
Match: XP_022922600.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_022922601.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata])

HSP 1 Score: 716.5 bits (1848), Expect = 1.5e-202
Identity = 368/402 (91.54%), Postives = 376/402 (93.53%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAV ENVGPKIGSPSQS EN MV SDSN+PKDVENQKPKNDS V +N EPDFHPNG DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
            QKKA LQERAAAATSF+LPS NFKAQMGQM NGF+ N QSLMVKSAA YGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFG   LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           +NNEGNNNRRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVY       VTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.0e-105
Identity = 199/284 (70.07%), Postives = 225/284 (79.23%), Query Frame = 0


Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAK------NFSGYFGAGGLGYTNDF 241
           +G DGGE+FKRDMR+L++L SKLNPMAEEFVPPSL K      N   +  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 242 LLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLA 301
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVY       VTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 302 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 361
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 362 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 421
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 422 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 453
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 4.1e-102
Identity = 194/295 (65.76%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 170 GYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGL 229
           G G++      +  +DGGE+FKRDMR+L +LLSKLNPMA+EF+PPSL K     F  G  
Sbjct: 42  GNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFF 101

Query: 230 GYTNDFLLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------V 289
              N F+   N   NE  + RRKK+   QG+RRMN + +  +R+E+ RRTVY       V
Sbjct: 102 AVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQV 161

Query: 290 TEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVL 349
           TEE LA +F   G+VVDCRICGDPNS+L FAFIEFTDE GAR +LNLSGT+LGFYPV+V+
Sbjct: 162 TEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVM 221

Query: 350 PSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLG 409
           PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+TQ ++KLFFES+CGEV RLRLLG
Sbjct: 222 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLG 281

Query: 410 DYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS-PRAQLN 457
           DYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 282 DYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.1e-99
Identity = 215/404 (53.22%), Postives = 268/404 (66.34%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNE----PKDVENQKPKNDSTVPMNGEPDFHPNG 121
           MAV EN G K+ S  Q+L+NN   + + E    P   ++Q PK+DS+ P+    D  P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--IDSTPET 60

Query: 122 NDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRP 181
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 182 NGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLL 241
           N   NG         +++DL D  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 242 QANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATV 301
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVY       VTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 302 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 361
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 362 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 421
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 422 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 455
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.0e-81
Identity = 158/274 (57.66%), Postives = 202/274 (73.72%), Query Frame = 0


Query: 193 DMRDLEDLLSKLNPMAEEFVPP-------SLAKNFSGYFGAGGLGYTNDFLLQANSVNNE 252
           DM  L  +  KLNP+A+EF P        +     + +  A     T     +   ++ +
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 253 GNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASCGEVV 312
            ++N RK+  +SQGRRR+  +++  +R++  RRTVY       VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 313 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 372
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 373 SDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 432
           S+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVEF +A
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALA 288

Query: 433 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 453
           +SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 DSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-80
Identity = 159/271 (58.67%), Postives = 200/271 (73.80%), Query Frame = 0


Query: 194 MRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANSVNNEGNN---NR 253
           M+ L  +  KLNP A+EF  PS  +N            ++DF++       +      NR
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 254 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASCGEVVDCRI 313
           R++N ++QGRR R+  + +  +R++  RRTVY       VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 314 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 373
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 374 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 433
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 434 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 454
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of Spg002412.1 vs. ExPASy TrEMBL
Match: A0A6J1G2E6 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 4.3e-203
Identity = 367/402 (91.29%), Postives = 377/402 (93.78%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP +DSTVPMNGEPDFH NGND +
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
           +Q KAQLQERAA A SFSLPS NFK QM QMPNGF+AN Q+LMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSLAKN SGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           VNNEG+ NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY       VTEELLATVFA C
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. ExPASy TrEMBL
Match: A0A6J1E992 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430559 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 7.3e-203
Identity = 368/402 (91.54%), Postives = 376/402 (93.53%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAV ENVGPKIGSPSQS EN MV SDSN+PKDVENQKPKNDS V +N EPDFHPNG DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
            QKKA LQERAAAATSF+LPS NFKAQMGQM NGF+ N QSLMVKSAA YGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFG   LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           +NNEGNNNRRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVY       VTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. ExPASy TrEMBL
Match: A0A6J1HZR5 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467705 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.6e-202
Identity = 365/402 (90.80%), Postives = 377/402 (93.78%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP +DSTVPMNGEPDFH NG+D +
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
           +QKKAQL+ER A A SFSLPSANFK QM QMPNGF+AN Q+LMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSL KN SGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           VNNEG+ NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY       VTEELLATVFA C
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 8.0e-202
Identity = 365/402 (90.80%), Postives = 375/402 (93.28%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAV ENVGPKIGSPSQS EN M+ SDSN+PKDVENQKPKNDS V +N EPDFHPNG DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
            QKKA LQERAAAA SF+LPS NFK+QMGQM NGF+ N QSLMVKSA GYGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFG   LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           +NNEGNNNRRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVY       VTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Spg002412.1 vs. ExPASy TrEMBL
Match: A0A6J1G2G9 (polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 3.0e-201
Identity = 366/402 (91.04%), Postives = 376/402 (93.53%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNEPKDVENQKPKNDSTVPMNGEPDFHPNGNDQN 121
           MAVPENVGPKIGSPSQ+LEN MV SDSN+P DVE QKP +DSTVPMNGEPDFH NGND +
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 122 IQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRPNGVI 181
           +Q KAQLQERAA A SFSLPS NFK QM QMPNGF+AN Q+LMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLLQANS 241
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSLAKN SGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 242 VNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATVFASC 301
           VNNEG+ NRR KNGFSQGRRRMNNKMNAVKRDEMTRRTVY       VTEELLATVFA C
Sbjct: 181 VNNEGHMNRR-KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 302 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 361
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 362 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 421
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 422 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 457
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of Spg002412.1 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-106
Identity = 199/284 (70.07%), Postives = 225/284 (79.23%), Query Frame = 0


Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAK------NFSGYFGAGGLGYTNDF 241
           +G DGGE+FKRDMR+L++L SKLNPMAEEFVPPSL K      N   +  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 242 LLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLA 301
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVY       VTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 302 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 361
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 362 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 421
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 422 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 453
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Spg002412.1 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 373.2 bits (957), Expect = 2.9e-103
Identity = 194/295 (65.76%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 170 GYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGL 229
           G G++      +  +DGGE+FKRDMR+L +LLSKLNPMA+EF+PPSL K     F  G  
Sbjct: 42  GNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFF 101

Query: 230 GYTNDFLLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------V 289
              N F+   N   NE  + RRKK+   QG+RRMN + +  +R+E+ RRTVY       V
Sbjct: 102 AVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQV 161

Query: 290 TEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVL 349
           TEE LA +F   G+VVDCRICGDPNS+L FAFIEFTDE GAR +LNLSGT+LGFYPV+V+
Sbjct: 162 TEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVM 221

Query: 350 PSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLG 409
           PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+TQ ++KLFFES+CGEV RLRLLG
Sbjct: 222 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLG 281

Query: 410 DYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS-PRAQLN 457
           DYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 282 DYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Spg002412.1 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 365.2 bits (936), Expect = 7.9e-101
Identity = 215/404 (53.22%), Postives = 268/404 (66.34%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNE----PKDVENQKPKNDSTVPMNGEPDFHPNG 121
           MAV EN G K+ S  Q+L+NN   + + E    P   ++Q PK+DS+ P+    D  P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--IDSTPET 60

Query: 122 NDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRP 181
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 182 NGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLL 241
           N   NG         +++DL D  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 242 QANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATV 301
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVY       VTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 302 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 361
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 362 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 421
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 422 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 455
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Spg002412.1 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 365.2 bits (936), Expect = 7.9e-101
Identity = 215/404 (53.22%), Postives = 268/404 (66.34%), Query Frame = 0


Query: 62  MAVPENVGPKIGSPSQSLENNMVPSDSNE----PKDVENQKPKNDSTVPMNGEPDFHPNG 121
           MAV EN G K+ S  Q+L+NN   + + E    P   ++Q PK+DS+ P+    D  P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--IDSTPET 60

Query: 122 NDQNIQKKAQLQERAAAATSFSLPSANFKAQMGQMPNGFDANGQSLMVKSAAGYGMNQRP 181
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 182 NGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGAGGLGYTNDFLL 241
           N   NG         +++DL D  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 242 QANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLATV 301
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVY       VTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 302 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 361
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 362 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 421
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 422 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 455
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Spg002412.1 vs. TAIR 10
Match: AT1G32790.2 (CTC-interacting domain 11 )

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-98
Identity = 186/272 (68.38%), Postives = 212/272 (77.94%), Query Frame = 0


Query: 182 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAK------NFSGYFGAGGLGYTNDF 241
           +G DGGE+FKRDMR+L++L SKLNPMAEEFVPPSL K      N   +  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 242 LLQANSVNNEGNNNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVY-------VTEELLA 301
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVY       VTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 302 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 361
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 362 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 421
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 422 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVS 441
           RIAFVEF MAESAIAALNCSGVVLGSLPIR S
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342

The following BLAST results are available for this feature:

BLAST of Spg002412.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574264.1	1.9e-213	82.61	Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyros...	[more]
XP_038900938.1	2.2e-206	92.79	polyadenylate-binding protein-interacting protein 12 [Benincasa hispida]	[more]
XP_023542023.1	1.4e-205	89.71	polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp....	[more]
XP_022945958.1	8.8e-203	91.29	polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita ...	[more]
XP_022922600.1	1.5e-202	91.54	polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_02...	[more]

BLAST of Spg002412.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	3.0e-105	70.07	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	4.1e-102	65.76	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	1.1e-99	53.22	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	4.0e-81	57.66	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	1.2e-80	58.67	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Spg002412.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2E6	4.3e-203	91.29	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1E992	7.3e-203	91.54	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=36...	[more]
A0A6J1HZR5	3.6e-202	90.80	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1JC04	8.0e-202	90.80	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1G2G9	3.0e-201	91.04	polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbit...	[more]

BLAST of Spg002412.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	2.1e-106	70.07	CTC-interacting domain 11	[more]
AT4G10610.1	2.9e-103	65.76	CTC-interacting domain 12	[more]
AT3G49390.1	7.9e-101	53.22	CTC-interacting domain 10	[more]
AT3G49390.2	7.9e-101	53.22	CTC-interacting domain 10	[more]
AT1G32790.2	1.3e-98	68.38	CTC-interacting domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 279..342 e-value: 0.0079 score: 25.3 coord: 369..440 e-value: 1.9E-11 score: 54.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 281..335 e-value: 3.7E-8 score: 33.1 coord: 370..437 e-value: 7.3E-9 score: 35.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 268..346 score: 9.865582
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 368..444 score: 11.929285
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 202..215 e-value: 3.9E-5 score: 23.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 238..348 e-value: 3.1E-11 score: 45.4 coord: 354..452 e-value: 4.4E-14 score: 54.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..120
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 62..456
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 62..456
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 364..445 e-value: 3.77363E-60 score: 189.245
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 357..450
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 243..347

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg002412	Spg002412	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg002412.1-three_prime_utr	Spg002412.1-three_prime_utr-scaffold6:251604..252252	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg002412.1-cds	Spg002412.1-cds-scaffold6:252253..252310	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:252423..252484	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253013..253081	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253201..253248	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253374..253433	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253592..253704	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253790..253862	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:253952..253996	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:254126..254215	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:254583..255201	CDS
Spg002412.1-cds	Spg002412.1-cds-scaffold6:255575..255708	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg002412.1	Spg002412.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding