Spg002150.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg002150.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 25543906 .. 25547358 (+)
Sequence length444
RNA-Seq ExpressionSpg002150.1
SyntenySpg002150.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGAGACGAAGCCTCTGGGAAAGAGTTGACGAAAATGGTGTGCGCTGGTAGGGAAGAGACTGATGCATCACGTGGGTGTGTTGTTAAACCCTGATTCAAATCACGAGAAACTAGATGGTTCTAAAAGAGTAGGGGACCATGGGCTATCTGGGTAGGGGTCCAATTGGCTGTTTATAGATAGCTGGAGGGAGGCCCATTCCTTTTCAATGGCAGAAAGTTGGTTGGTAAATGGCAGAAAGTTGGTTGGTTTTACCAGATGGATTGTGGACCGGGCTGTTTTTTGTTTTAAACCCAAAACCCAAATTTGAATGGCAAAACCCTACCCATGAGAAGCCACTAACCTTGGCCACCATGGTGTTCTGTGCTACGAAAATTGGGCAAGCTCATGTTGATGTCACTCACATGTACAACTACTACGTTCCATCAACAGCCACTAAGTTCACTTTTTTTAACCCTAATATGGACTATCGTGAGGATGATGATGATTCTGCAAGTATGTGGGGCTATGAGCTTATTAGCAGTGGGCTGGTCTTGAATAAATTGGATAACAAGCCTATTTCGTTTCAAAAGCAATTTATAAGGGCATGCAACATGATTTTTTTGGGTTGAGTTTTTTTGGTTGCACTCCAGCTGGCCCAATATGACACTAATGGGCCTAGGTGAAGTTCTCAAAGCCAACAATACTGCCGCAAGAAACTTCCAATTATGCTTTTCACTTGCGTTCCTCAACGTTGGCCACCGTCTCTTCCGTACATCGCCAACTATCGACTCCTCTATCACTACCAATTAGGGGTGCAAGGGAAAACCGAAAAAAAACTGCCAAACCGATCGAAAAAACCGATGGTTTGGGTTTAGAACGGTTCGGGTTGGCGGTTTTGGTTTGAAAATATTGAAAACCGTTTAATTTGGTCGGTTTCGGGTTTTGGAATGGTTAGACCAGTTATAGACCGAATCGATCGATTAATATATATATATATTATCAAGCAATGTAATAACCAAACTTCTTAAATGGCTCATGTGGTTAAAACGTCATACCGGCATATGCAAGGGCGTGTGTTCGAATCTTGCCAAGGTCAATTAATTTTTGATATGCATATAATATTCCTCAGACTGCAGGCCCAAAACACACAAGCCCGAAATGCATGCGTACCGCGGCCCAGACCCACGATTCAACTAAACGGTGGTTCGGCTTCGGCTTTACACAGTAACCGAGCCGAACCGACCCATATGCACCCCTACTGCCAATCACCACCGGCCACCACACAGGACTGACGAAGCGTCGACCAGCTGGGTTTTGTCTTTAAGAATGCTTATCTTATTTTTTTTTTTTTTTTTTTGGAAGAATGTTGGTCATGTATTTTCGTTTTCTTGGAAAAAGAATAGTTGCCCAATTTTTGGATTGTGTTTTGTATGTCATTTCGTTCGAGACAAGATCATGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTAACATTTGACCGAACATTAATAAAATGATGTATCATTCATTTATCTTGTTTGTATTGAGTAATCTTGTCTTGTTAACCCTAAAGGTGTCTTTGAAGGGCGGAGTATTGGGAGAGTACTAGTTAGGGATATATTGGGAATAGTAATGGAAGATGAGTAAGGGTATAGTAGTAATTAGATAGGAGTGCTTTGGTTATAAATAGGGGAGTTAAGGTCTTAGAAGGGTATGGAGAATTTTGAGTGGTCTCATAGTGAGGCTTTGGGAGAGAGTTATCCCTCTCGAAAGGCTATCGGTTATATTGTAATTTCTTTTCGGTATTGCAATATATTAGTATTTTTTTTTTTGAGAAAGGCAATATATTAGTATTTGGTATTTTCTTAGTTTGGATACCTAATAGTATTCCCTTACAATATATTGATATTTAGAGGATGAAACAGCCAAAGGCTTTACAAAATCTCCCAGCCAATTTGAGAGGGCTGGTAAATTCTCTTTCTCACACTACAACCACGAATTCAGCATAAACCCTAAAAGGAAACATAAAACAGCTTATATACTACCCTGCCCCCAACGGAAAATGCAGCACAAACCTCTTCACTCTCTCAGGACCACAGTGGTCCCTCCCTCCCTTCAGCACGCCTATCTACATAACTAACTTTCCTGTGAATTCCGTTTCTTACCCCTCTTGTAAACTTTAGTCACTGGAGGTCTAACATTTTGTTTAGAATCATGGCGAAATGCCGGAAAGTTACTGATGAAATACCCAAACAACGGACTGCCAATAACTCAAATCTGAACTGCCTCTCCATCCCTCTTCTTGCTTGCTTTCGAGGCAACTTTCTCCTGTCAAAGACCGTGTTTCTCCATTGCAACTGCTAGCCACAATTCTGCGTGGTTGAGTTAGAAACTCATTCTCTTAATCCTTTTGTTTTTAGGTATAAATTGTATTCTTTTTTGAGTTTGGATTTCTAGTTGTTCATTTTGTTTAGCTTTCTTAATATAAATGTTTGTAACCACCCTGAGTTGGATTTAGTCATTTTGGGTCAGTGAAAAGGGTAAAAAGGGTTTTGGGAGAATGGGTTCAGATCTCCTTGTAGCCATTCACCTAGGATATTAAAATCTTATGAGTTTCTTGACAACCAAAATTTATAGGATTTAAAGATTGCCATGAATAAAAATAAAGTATAAATATCTATTTGCTATGAAGGAAGGTTATTATACTATCTTTTTCCTATGGTTACGATGGTGAGAAAATATTGCCACCACCTAGTTTTGAGGCCTAGTTTTTCTATCATGTTTTGAAGAACTTCTATCACATACTCCTTTCTTCTTCCTTTTATTATTCTTTTTTTTTGGGTTTGTGTATCCAATGTACATGGGAAGTTTCTGCTTGCTGCTCATGCCATTTTGACTGGCTGTTTTCTTTTGATCTTGGTATTTTGCAGTCCTTCCTTGGTGCAAAAGCATGATTTGCTCAGGCGCTTAAAGGTCTCTTGCAGCCAGTTGAGTCTACAAAACTTGGAAGTTTAACTTCTGGAGGAAACTATAGGATCGATCATTTGATTCTAAACTTAAAGTTGAAAATTGTAAAAAAAAAAAAAAAAAATTGTAAGGTGAAATTCAAAATGATTACAAATATTGTTTTCCTCGATACGAATTTGAGTTATCGAAGATGGTAGGCTGCAAAAACCTGCTCTTCTTCCTTGTACACTAATTGGCAGCACCATCAGTTCGATGGGTGCTACGAGTTTACTGTATGTGTTGCACATTTAATTATGCGTCTCGTTTTTCTTTCCTTTTCTTTTTCTGTTCATCAAGATGTTCGTGTCACTCCTTTTTTTGATGGTCGCTGCAAATGATGGCCAAAATTTACCATGTTATCATGAAATGATCCATCCATCATAAATCATCATATCCCTTCTTCTTAGTCAGAAAAAAGAAGTCCTTTCTGTCTCGTAGTTCCCTCAATCATCATT

mRNA sequence

ATGGGTAGAGACGAAGCCTCTGGGAAAGAGTTGACGAAAATGGTGTGCGCTGATGGATTGTGGACCGGGCTGTTTTTTGTTTTAAACCCAAAACCCAAATTTGAATGGCAAAACCCTACCCATGAGAAGCCACTAACCTTGGCCACCATGGTGTTCTGTGCTACGAAAATTGGGCAAGCTCATGTTGATGTCACTCACATGTACAACTACTACGTTCCATCAACAGCCACTAAGTTCACTTTTTTTAACCCTAATATGGACTATCGTGAGGATGATGATGATTCTGCAAGTGTCTTTGAAGGGCGGAGTATTGGGAGAGTACTAGTTAGGGATATATTGGGAATAGTAATGGAAGATGATCCTTCCTTGGTGCAAAAGCATGATTTGCTCAGGCGCTTAAAGGTCTCTTGCAGCCAGTTGAGTCTACAAAACTTGGAAGTTTAA

Coding sequence (CDS)

ATGGGTAGAGACGAAGCCTCTGGGAAAGAGTTGACGAAAATGGTGTGCGCTGATGGATTGTGGACCGGGCTGTTTTTTGTTTTAAACCCAAAACCCAAATTTGAATGGCAAAACCCTACCCATGAGAAGCCACTAACCTTGGCCACCATGGTGTTCTGTGCTACGAAAATTGGGCAAGCTCATGTTGATGTCACTCACATGTACAACTACTACGTTCCATCAACAGCCACTAAGTTCACTTTTTTTAACCCTAATATGGACTATCGTGAGGATGATGATGATTCTGCAAGTGTCTTTGAAGGGCGGAGTATTGGGAGAGTACTAGTTAGGGATATATTGGGAATAGTAATGGAAGATGATCCTTCCTTGGTGCAAAAGCATGATTTGCTCAGGCGCTTAAAGGTCTCTTGCAGCCAGTTGAGTCTACAAAACTTGGAAGTTTAA

Protein sequence

MGRDEASGKELTKMVCADGLWTGLFFVLNPKPKFEWQNPTHEKPLTLATMVFCATKIGQAHVDVTHMYNYYVPSTATKFTFFNPNMDYREDDDDSASVFEGRSIGRVLVRDILGIVMEDDPSLVQKHDLLRRLKVSCSQLSLQNLEV
Homology
The following BLAST results are available for this feature:
BLAST of Spg002150.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg002150.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg002150.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg002150.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg002150Spg002150gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg002150.1-cdsSpg002150.1-cds-scaffold2:25543906..25543957CDS
Spg002150.1-cdsSpg002150.1-cds-scaffold2:25544167..25544403CDS
Spg002150.1-cdsSpg002150.1-cds-scaffold2:25545471..25545540CDS
Spg002150.1-cdsSpg002150.1-cds-scaffold2:25546828..25546912CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg002150.1-three_prime_utrSpg002150.1-three_prime_utr-scaffold2:25546913..25547358three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg002150.1Spg002150.1-proteinpolypeptide