Spg002090.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg002090.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 25953154 .. 25959623 (+)
Sequence length519
RNA-Seq ExpressionSpg002090.1
SyntenySpg002090.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAATTAGCTCATGCGAGCAAAACAATACATTGTGTAATACGTCGCAAATGCAAGTCTACCCTGAACCACAGCTTGCTGTGATTTCTCTTTCTCCTTGCTTCCTTGATCTTCGTTCTCTCCTCTCTCGTCTCGTCCCTTTGAGCAGGTGGATTCTATTTATAGGCGAAGGAGACTGATTTCTCCAAGGAATTAGAAAACTTGCTTCAGTCATCTTCTGCCCACTTGCGCGTCAGTTGTGTCAGCATGGTCTTTTCATCCATCTTTTTTGTTCATGATCGTCTCTGGATGTGTGCCTGCGCTGAGAGAAACTTGGGTAACAAACAACTGCATTATTAATGCATTAGCACCTTATATTTTTATAATTTCGTACCGCATCCATAAATATAACCTTCCGCAGAAAACCATCGCATTTTCCTTCCTTATTGCGTTGAAGTAACGCATCAATGTATCTTTTAGCCTTGTTTTAGCTTAAGTTTAAAGGAGAAATAACTTGCTTTTTGCAAGTTATCAGACAACTGAGCATAGCTCATCATAGAATGAACCATGTCTAACCAAGTTCTATTTCTCTTTTATGATACACCATTTTGCTGAGGTGTACCAAGTGCTGAGAGTTGGGATTGGATTCCATGTTCTATCATATAGTCCTGGAATCTTAGATCGAAGTGTTTTTATCGTTTTACCTAACAGGTTATCAACTTCAACCTTATACTTCTTGAATTGTTCAAAGGCTTCAAACTTATGTCCTATTAAGTATAAGTAAGCATACCTCGAATAATCATCTATGAAAGAGATGAAGTGTTCGTACCCTCCTCGAGCTCTTACATTCATTGGACCACAGAGATCCGAATGTATAAGTTTTAAGGGTTCTTTGGCTCTATATCCTTTTCCAGTAAAAGGTCGTTTAGCCATTTTTACCTCAAGACAAGATTCACATGGAGGAAATCAATTGTCTTCTAACTTGTCTAGAAGTCCATTCTTTACCAATCTCCCGGTCCTATCGAGATTAATATGACCTAATTTTAATTGCGAAAGATGAGTATCGTTACTACAAGGAGAAATTCGTTGCCTTTTATTTCTTTGAGTAGTAGCAGTCTTAAACAACTCAGTGTTCATGACTGCTTTACTCTCGATTGGTCTTAAAACATATAAATTATTTTTCAGTTTAGCTGAAGAAATGTTAAAACTCCCTTTCTTGAAATGAACGATTCATTCACTGAGAAAGATATGGAGTAATCTTGTTCAAGCATACAAGATATAGAAATCCAATTCTCTCTTCAACCTCCAAGACTTTTAGCATGCTAGGTTTAATGAGATGGTGGTGGCACCATCTAACGACCAATTGAACGCGGCTGTCAGGGAGGTTGGCATTGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAATGCACATTCCAAGCGGCTTATTTAAAGAGTGAGGCTAACACATGGTTGGGCTTCATCAAACTGCGCTTGCTTTCGACAACCCACGACTCGAAAGTATCCCGAGACTGAGTGCTTCTAGTATTTTCTATTTTGCGTTCTCTGAGTATTGACGTTGGAAAAATTATCTCGAATGAAATCTTTAATTGCTGGCGAAAGAAGGTTGGTAAGCTGTTCTTCCCAAACACAATCACAATGTTGTGCAGTTGGGCAGGAGTGCCCACACGTCCAGAGGATGTTTTTCTACTTGACAAGGGGATCATAAATACACCCAATTTGGCCCGACTTCAGCGCACGCAGGAGGCACGCCAGGGTGGGCTAGTATGTGGTATCCACCAAATTCTAGAGCAACTAGCACTTTCAGCCAGTAGGTAAGAGTATGCTGAAAGGAAGGCTCAAACTTACTAGACTTACGCTAAGAGGAGGGATGCTACACTGAGGAGGGCCTTGCAATCAAAATTTTCAAAACCATATCAGGCCTTCCCTATGTTCCCCGATGACTTGTTTAATCCCTCATTCCACCACTGCCAGTAGAGAGAGAGGAAGAGGAGGAAAATGAGCAGGGTCAGGAGGATTGATGGATATATTGACTTTGGGCGAGCATTATTTTTTTCCTTATGTTTTTGATTGCTTGCGTATTCCTGACCCCAATCTCTTTTGATGTTTATGTTTTCTGTTTTCTTGTTTTTAATTTTCTGCTTCTAGGCCACCAAAAATATCTGCTGATGTAAATTTCTTTTTCTATGTTTTTAATGAAATTTCCAAAGTTGCTTCTGTTCTATAGCACTGAGCATTCCTAACTTAACCATTCTCTTCTGAATTTTTGAAGTTGAACTAGTTAGCTTAAATTAGATCAAGGTATTCTGATCTCCAAAAACCTTTTGCTTGAGCATTTCTTCTAGCCTGGTTGTCGTTGCGGTAAGAAGATTCTGAGGTAGTGTTGACTTATTTGATCCACCTTAAGCTTAATTCTAGTCCCACGCTTAGTTTCAAATTCAGATAGAAAAAGTATTAAGTTTGGGGGTATAATTTATCATGTTCATAATTCATTGGGGACAATGAATAATTCAAGTTTGGGGGACATTTTGCTACGCCACTTATTTTGCTCGAGCATTCCTCTCCTTCATAATTATTTTACTAGGTTGTTGAGTAACCAGGGACATTTGTGCTACCCACAGTTTGTCTTTGTGTCAAAAGATGACCTAGGAAATATTGGAAAAATGAGAAAAATTAATTGCTGAAGAAAAATATTTTGAACATTTTTGCTAAGAAAATTCATGGAGCAAAAGTTTTGAAGGATGAATGATAATCTAGCAGTTTTCTGTCTCCCAGGGCTTAGGTGAGCTTCATCATAAAATGTCGCCATTCTGAGAAGCAAGGGATAGAATAACTAAAGATTTTTGAGCTAGCAATGAGTATTTAGCCTAATTGGTGATGAGTTTGAGGCAAGGGTGGTGCGTCGTCAGCTGAATGGATGAATGTGAGATAAGATGATAAATAAGATAAAGAATAATTCAGCTAACACTTAGTGCAAGTATACAGTGTCGCACGTAGTAATAAAAAAAAACCTTAGAAGTATTCTAAGGGTATCGATCCTACGAGGACTAAATTGGAAATTCAGATTTGATGAAGAAACTGCTCAAATGATTGCTTTTGAAAAGGTAACCAAAGAAAATAAGTTGATTGATTGGGTTTTTGAAAAGATAAATAAAACATACAAATAGCTAAAAGAATAACAATAAGAAATAAACGAGGTATTCAACATGGATTCATCCCTAAGGTAATAACCCTAGTCATGCAATATTTAACTTAAGCCTATTCAATGCATTGGGTCAGATTTAACTCCTATTTGGCCCTTGCTCCCAAGAACCGTTAGAAGGCTAAGCGAGAAGCGTTATGCACATTTCTGTGACTCGACTCCGACATAGATAATTCACGAATGCAACCTATTACCCTATAGTCGATATAGACTGCCTTAGGCAGCTTGCCCTATACCGTCGAACAATCTGTTTCGAGCTTTTTCTCCTATATCACCTTTATGAGAACGAATATCGTTTGTCCCTTTCGAGATCAAACTCACATAGCATGCAAAATCTAAGTGATCAAGTTAAACTCAGCAAGATTAGAGTGATAATCTATAAAGAATGACATGCATTGAACAGAAACTTAAGCAAACAAAACACTTTCAAGCCATTAAACCGTAAGGGAATTCACCATATTGAACCCCTCAACAGAATTTAGCTACTCATGGTGAGATAAAATGCAAATGAATACATTTTCATTGAATAAAGAATGTAATGAATACAAAATAATGAAAAGTAATCACAAGCTGGAAATAAAGGAGATAGCTAAATATTATGGGTTTTTCTATTTACTCAATCCTTCTAGAGTTCGCTAAGACACTCCACTCTCTCGATTTTACAAGTGGGAATGGGTGAAAATCCCTACAAACCCTAAGGTTTGATATCTAACTCAGGTTAGAATTCAATCATCTAAGAAGGACCTCGGGCATCCCTACTCATAGGCATCGAGCCAGGGTTCTGTCACCACCCTTTTCTTCCAATGAGTTCTGCTTGAATTTGACTTCGAATCTCGAGCTTATATAGTGTGGAAAATGGTTGAAGAGCTGCGAAATAGGTGCTGGAAGGTTGCCCAGTCAGTTTCGGGGTCAAAACAACCAATTAGGTGCGAAGAAGACTCGTCAACAATGACCCGCGGACGACTCGGAACGACTTCAATTTTTCTAGAAATGCGGTCGCATTTCTGGGAAATTCCAGCTTTTCCTCTGTTTTTCTGCACAGCACCAAACTAAGTCAAATTCTCTTAAAATCAAGTCTTTTTAAGCTCAAATGAGTACAATTTGACAAAAGTGATTCTCAACAACCTAACTGAACAACTTAAGCATATTTTGAGCTCGGGAACAGTAAATTGATCACAACATACAACATTTGGCCAAGAAATGAGCTAAATATAAGGGTAAAATTGGTATATTTTTTACCCTTATCACAAGGTATACTGCACCATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGACCGTAGGGCTGCTTTAAGTCTGAAGAACAAAAATATAAACCCCTTAAAAATGTGTTTTAATATGTCTGATAATAGAGCTAGGTTGTGGCAAGTTCTTAGGGTTGAGTTAAAGGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGTAGCAGTGCTTGGTTTTGCAGAATGCTCTGGTAAAGGTTGAAGGTAGTGTTGGATTATTTGTTTTGATTGAGTTACACTTTGTCTAATGTTTTGAATTCTCAAGGGAAGGTTAGTTAAGTATTGCTCGGGACTCTCAATAGTTCAAGTTTGGGGGTATGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTGTTCTGTGTGTCTTTTGTGTTAAATAGGGTTGCTTTCAGATGAATATTATATGCTTTAACCCATTTGGAAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAAAATATTGCTGAGCGACTTGAGGGAGCAAAATCCGTGATACAGTAAAGCAAGGAGCAAAACTGCCACGTAGCAGCTCGTAATCCATTTTAATGAAGTGGCGTTAGCTGAATTAGTTTCGGATCTAAGAAGCCTGAAGAGCCTTCCACGTGTACAATTTGACCTAATTAGGGTTTGATCTCACTCTATAAAAGGAAGGAGCCGTCTCAAGTCAAAAATATTCCATTTTTGGGGAATATTCCAATTTTCATATTTGGAAGCCGAATAGAGGAGGAAAGATTGGAGACTTCAAGAAGACCATCAACTACGGATCTAATCAAGAGAATTAATCTTTTCTTGTAATTTCTTATAGTTATGGATGCACATAGTCAGATTGTAGCGTGTGTTATGATGAACCTTATGAACTAAATTTGCTTAGGTGTTGGTTAGGAATTTTGTAATTGTCGTGCTTTATACTCTATGCAATATATGTTGATTTGAGCATCTTGATTATTTGATGTGCATATTCCCATTTTATGCTTGCTTGGCCAGCCGATATGAATATCACTTCTTAGTTTCAGGGATGATTTGAGAAGTGTGTGGCATTTAATCACACTAGACCATTATGTGTTGGTGAACGCCAGTGACTGAGTTAGGGATAACCAGTTGCCTAGTGCTTGATCGGTAGCACGTCATTGGAGTTGAAACACATTCCAAAAAATCCAGAGTTTCGGGAGGATCCTGCTAATAAGACTGCAAGAGAATTGCCTAATTAATAATATTGCTAGAGCATCTTTAAAAACAATAACTAAAACCCTGACCAACGCCTGTTTCCAATCTGTCTGCTTGATCCGTTTACTTTCTGTTCTGTCATTTCATTTGCTTCAGCATTTTATCAAAATCAATCATTTTAACAAACCTTGAAACCATTAAAAAGTTACACAAGATAGGTAAAGTGAGAGCTATTCAGCCCCGTGGATACGATAAATTACTTATCATTTGCTGCGGATTGTGTATGCTTGCACAATATTCTAGAGCTTATTTTTGCTATATTTTTACCCCACTTTAGAAGGCAACACTACTGATCCACTGAATTGAGATAATTCTCAACTAACTCTAATGCCAGAATAACTCATATTCCTATAGACATTAGCCAGCGTTGTTCGGTCAAGGATTCATTAACATATTTAACTCATCCCCGTAAGTGTAACCCTCCCTCTTTCAGATCCCAAAGGTAAGCCCTAACAAGCTAGTATTGAGAAAGACAATGTTGGGACATGAACCTAAGAAACCCTATTGATAGCGAGCAAAAATGTCGCTATTTTAGTCCCAATTTATTAGGCTTTTCTGTGCTTTAATCGTGTTATTAATGAAAATATTTAATGTATTTTGTTATTTGGTCCTTAGGAGCAAAGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCTAATAAAGCCCAAATCCAAGCTTGGATCAAAAGAGGATCCAAAGAGGCCAATCATGATGGAAAAGCTCAAAGAGAAGTGA

mRNA sequence

ATGAAGAAAATTAGCTCATGCGAGCAAAACAATACATTGTGTAATACGTCGCAAATGCAAGTCTACCCTGAACCACAGCTTGCTGTGATTTCTCTTTCTCCTTGCTTCCTTGATCTTCGTTCTCTCCTCTCTCGTCTCGTCCCTTTGAGCAGTTGGGCAGGAGTGCCCACACGTCCAGAGGATGTTTTTCTACTTGACAAGGGGATCATAAATACACCCAATTTGGCCCGACTTCAGCGCACGCAGGAGGCACGCCAGGGTGGGCTAGTATGTGGTATCCACCAAATTCTAGAGCAACTAGCACTTTCAGCCAGACTAAATTGGAAATTCAGATTTGATGAAGAAACTGCTCAAATGATTGCTTTTGAAAAGAATGCTCTGGTAAAGGTTGAAGGAGCAAAGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCTAATAAAGCCCAAATCCAAGCTTGGATCAAAAGAGGATCCAAAGAGGCCAATCATGATGGAAAAGCTCAAAGAGAAGTGA

Coding sequence (CDS)

ATGAAGAAAATTAGCTCATGCGAGCAAAACAATACATTGTGTAATACGTCGCAAATGCAAGTCTACCCTGAACCACAGCTTGCTGTGATTTCTCTTTCTCCTTGCTTCCTTGATCTTCGTTCTCTCCTCTCTCGTCTCGTCCCTTTGAGCAGTTGGGCAGGAGTGCCCACACGTCCAGAGGATGTTTTTCTACTTGACAAGGGGATCATAAATACACCCAATTTGGCCCGACTTCAGCGCACGCAGGAGGCACGCCAGGGTGGGCTAGTATGTGGTATCCACCAAATTCTAGAGCAACTAGCACTTTCAGCCAGACTAAATTGGAAATTCAGATTTGATGAAGAAACTGCTCAAATGATTGCTTTTGAAAAGAATGCTCTGGTAAAGGTTGAAGGAGCAAAGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCTAATAAAGCCCAAATCCAAGCTTGGATCAAAAGAGGATCCAAAGAGGCCAATCATGATGGAAAAGCTCAAAGAGAAGTGA

Protein sequence

MKKISSCEQNNTLCNTSQMQVYPEPQLAVISLSPCFLDLRSLLSRLVPLSSWAGVPTRPEDVFLLDKGIINTPNLARLQRTQEARQGGLVCGIHQILEQLALSARLNWKFRFDEETAQMIAFEKNALVKVEGAKSVILGEKVPKMKLIKPKSKLGSKEDPKRPIMMEKLKEK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..172

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg002090Spg002090gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg002090.1-cdsSpg002090.1-cds-scaffold2:25953154..25953305CDS
Spg002090.1-cdsSpg002090.1-cds-scaffold2:25954808..25954968CDS
Spg002090.1-cdsSpg002090.1-cds-scaffold2:25956204..25956262CDS
Spg002090.1-cdsSpg002090.1-cds-scaffold2:25957832..25957853CDS
Spg002090.1-cdsSpg002090.1-cds-scaffold2:25959499..25959623CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg002090.1Spg002090.1-proteinpolypeptide