Spg000629.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg000629.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 37500515 .. 37503678 (-)
Sequence length225
RNA-Seq ExpressionSpg000629.1
SyntenySpg000629.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAGCTTCACAAGGCTTACTCCAGGGTTAGAGTCTCGTTCATTTTCCGTTCTTCGTTTCTTTCCCTTTTCTTTAATGTTGATTTTATGATGTGGGATTTTGTTAGATTTGTAATCTTGCCTTTGTCTGAGAATGAATTTGACTTTCTTAGCTTTTCTAGATGTGTTTCCGTTTCTTCTCTTGTTTGTCTTGCTTTGCATTTAAGGTATGCGGTTTTCTTTCTAAATTTCTTCTTATTCTCCATTTTTGGGGTGTGTTCGTTGTGGATCTAATTTGTGAAGAAGCGTTTTGTGTGGAACCCTAATGTGTTGCCTTCGTGAATACGGGAGAATGGTATTTGTTGCTCTATGTTTTAATTATTTGGACCGAGCCTTAGAAAGTTTTCATTGCATGCAGTTTGGTGGAAGCCCCTTGAAGGTTTTTGCTTCCAGGATCCCGAACATTCAATGTATTGGTTTCCTTTTTTCTTTTCAATCATTTTTGGGGGTTAATCTGTATGCGTATTGTGTGAATGTTATGCCAAAAGTACAAGAAGTTGAATAAGTTGTGTGCTCATTTTCAGATAGTGAAGCTTTTAATAATCAATGGACGGGATAGGAGGTGAAACTGCCTCAGCGGCAGCACCCTTGAGCCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTATCTACAGATGGATCGGAACCCTTTTTGTAGTGGCAATTTATGCATTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCATATGGTCTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCGGAGATGGAAGTTTCAGATGGACCTTTGCTGCCAACTAAAGGTTCAGATGAATTCAAGCCATTCATCCGCCGGCTTCCAGAATTTAAGTTCTGGTAACTATGGAATTTCATTCACGAGCTTTTGCATCATTTTCCTGTTTGTATTTGGCTGGTAAATTTTGAAGTTTGCTTTTGTGTTGTTTCATCACTACAAATCCGATTTCAGTATTCTGTTTATCTATTATGTTTAGCCTGGTATTGAAAACTTGTCGAAACTTGGTTGGCTTTGGGCGTGAAAGAGGCATAGGCAGCGGTGAGGGAAACTGACAGTATGGCATGCAACATTTGGTTATATTGTAATCTTTTGTGGCCTTGCTCATTATGATGTGATAATGTTCAACATCCTGAATCCACACAGTCAAGCTTCTTTACCTTGATTGGAGTACTTCTTTTAGTGGGGTTCCTTTTTGTGGGCTGGTTTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGTTGGTCTTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAATCCTGATTCCACACAGTCATGCTTCTTTCTTTTGCACCTGCCCACAGCTTACTTATATAGTTGATATCTCCAGAATTAGAATGTAATGGAACAAGAAGAGGCATTTTCCTCTGGCTCAGTAATTTAAACAAGACAGGGAAAGATACAATTATCGTTCAGATTCAGGAAAAGTTTGCCTATATATTTGTTGGTTCTCATTGAAATTTTGATGGTTTTAGAAGAACCTGGTCTCATTGGGCCTTATTATGTAGTGTAGGTTAATGTTTTCTTTTTACCTTTTATCCCTTTTCTCTTTTAGTTTCTATTCCTTTCTTTTTCTTGGTACATTTAGGAGAAAGTTCCTTGCTATTATAGATGTTACTCAGTATGACAATAGATCTAAAATGGTAACCTCTTTGTTGGGTAACGCTCTCAAATATTTCCTGGAGGCTTAGTGAAGTAGATATGTTTACGGGATAATTGCTACTCTATTTTACACCTTGAGGGAAAGGCACTACTGACCTTCTTCCAGGTTTCCCATCGACAGAAAGACTTCCCTGAATCCTTGGAATTTTCTCCCCTTCTTATATCAATTTGTTTGGAAGAGTTATGCCATCACCTTGAGATCCTGCAAGGGTGTGAAACTTCGGCAACTAATTTTTCTGATATCTTATTTGTGGAATTTTGCTACGGACTTTAGAAATATTCATCTTTGCCTCCTCGTAGTTTATTAATGGATACTGTTACTGCACATTTTACTTGTGTGTTTAGTAGTTCTTTTCGGTTATCTGAATTTGAATGCTTCAATTGATTATATTTGGATTCCCTCATAACACAGTTCCCTTTTGGAAGTTATTAAATTTTTGTTTATTTCTCATATGAATGAAAATTTGTGTTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATATTTGATGTTCCTGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATTCCATTTAGTCTTGGAAAGCAGGTGACTTATCAATTACTTCTAATACATTATGCTGCTGTTTCTTTCTGCTCTGTTTACCTTTCTCCGGCCTTCTAATGTTGTGGTTTACTATTGTGGTCTTGCTTTTTGACAAGTTTTTTTTTTGTCTGAGGAAACAAATATTTAAACGAAACATTTCATATTTTACAGAAGTACGGTGGCAAGAAACCTTCTGCAAGTAGCGGTATCTCCAACGATGATTGATGCATGGCTTATTATTTACAGCAATTAGTACAAGTACTGAATGGAGGGAGAAATCAGAGATTTGAATATTCACAGTAGCAGAAATTTTTTTCATTGAAGTTACTTGTAGTTAAGATTGCTTATGCATTTAATCATTGATGATGCACAGGACATGGTTATGCCAAATCCTTTATGATAACTGAAGAACTGCTGTTGTAGAAATTCTCAGTTTAATACACGTTGTAATCCAGTTCATTCGCAGGGCGTCATTTGAAAATTTTGTTTGCTGTTTCTTATTCCTCCTCCCACCCCTTTTTCTGGCCCTGCTGTGGAAAATTTAAGCTGATAGTTGCAGTGTTCTTGTAGAAATTCCCCAATCACATCTGGGAGGGAACTTTGTGTGTTTATACTGACGATGATGTTGAGAGTATGCTGTCTGAACAGAGTCATGATTGAAAGTGAATGCATCAGAAAGATGTCTGTTGGAAACAAATTTTAGTGAGAAATTTAGGAAGCAA

mRNA sequence

GTTGAGCTTCACAAGGCTTACTCCAGGGTTAGAGTCTCGTTCATTTTCCGTTCTTCGTTTCTTTCCCTTTTCTTTAATGTTGATTTTATGATGTGGGATTTTGTTAGATTTGTAATCTTGCCTTTGTCTGAGAATGAATTTGACTTTCTTAGCTTTTCTAGATGTGTTTCCGTTTCTTCTCTTGTTTGTCTTGCTTTGCATTTAAGTTTGGTGGAAGCCCCTTGA

Coding sequence (CDS)

GTTGAGCTTCACAAGGCTTACTCCAGGGTTAGAGTCTCGTTCATTTTCCGTTCTTCGTTTCTTTCCCTTTTCTTTAATGTTGATTTTATGATGTGGGATTTTGTTAGATTTGTAATCTTGCCTTTGTCTGAGAATGAATTTGACTTTCTTAGCTTTTCTAGATGTGTTTCCGTTTCTTCTCTTGTTTGTCTTGCTTTGCATTTAAGTTTGGTGGAAGCCCCTTGA

Protein sequence

VELHKAYSRVRVSFIFRSSFLSLFFNVDFMMWDFVRFVILPLSENEFDFLSFSRCVSVSSLVCLALHLSLVEAP
Homology
The following BLAST results are available for this feature:
BLAST of Spg000629.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg000629.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg000629.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg000629.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg000629Spg000629gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg000629.1-three_prime_utrSpg000629.1-three_prime_utr-scaffold8:37500515..37501065three_prime_UTR
Spg000629.1-three_prime_utrSpg000629.1-three_prime_utr-scaffold8:37501234..37501414three_prime_UTR
Spg000629.1-three_prime_utrSpg000629.1-three_prime_utr-scaffold8:37502744..37503115three_prime_UTR
Spg000629.1-three_prime_utrSpg000629.1-three_prime_utr-scaffold8:37503230..37503262three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg000629.1-cdsSpg000629.1-cds-scaffold8:37503263..37503281CDS
Spg000629.1-cdsSpg000629.1-cds-scaffold8:37503473..37503678CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg000629.1Spg000629.1-proteinpolypeptide