Spg000417.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg000417.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Locationscaffold8: 37323864 .. 37331761 (-)
Sequence length615
RNA-Seq ExpressionSpg000417.1
SyntenySpg000417.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCACACCCGGCACAGGCACAGACGACCCTGACGTTGGAAGCTTTGCAGGCGCTCCTGAGCAATGTCGCTGCCAATCAGGCACCTCCGACGAATCAGAACCAGAATTAGGTGGGGTCAACTGAGGGCTCCAGGTTTTTGAAAGATTTCAAGAAGTATGACCCGCTGTCGTTCAACGGGAAGATGGTGGACCCTACTGTTGCGGAGGCTTGGACGGCCACGATGGAGGAGATCTTCCGAAACATGGGGTGCCCTGAGACTCAGCAAGTCCCATGTGCTACATTTATGTTGAGGGAGGATGCGCTGTTTTGGTGGCGGTTTGCAGAGAGATCCATTGATACCTCTGCAGGTCCTATCACATGGCTCCAGTTCAAGGAGACGTTTTTCCAAAAGTACTATTCTGCGATCCTTAGGTACAGGAAGGAGGCAGAGTCCATGGCTTTGAAGCAGGGTGACAAGTCGGTGGAGGAGTACGAGCTGGAGTTCACGCGGTTGTCCCGCTTTGCCCAGAGATGGTGGATACTGAAGCTAAGAAGACTAAGAGGTTCATTCTGGGCATCAGAGATGATGTGCAGCCGGTTGTAGGGGCCCTTGCCCCAGCAGATTATGCCGCAGCCCTTCGAGCGACTATGTTTATGGGTATGCCAGCTGTGAATGCTACCTCGGTGGTTAAGGAGCCAGAGCCCAGTGTAGGCGAGAAAAGGAAGTTTGATTGAGGTTCCTCGAAGTCTCAACGGAATTCTCAGAATCATCGGTCCACGCGCCAGAGTAGTGCTGGCAAGGAGAAACCTTTCTGTCCAAAGTGCGAAGGGCATCATGAAGGTCAGTGCTTAGTCGGCACAAGATTGTGCTTCAGATGTGGAAAGGGCACATGGTGGCAAAGTGTCCTAAAGGCAAAAATTTCGATTCTGGGAGGTCTAATTGCTCTAATTCTATACGGGCTTGCTTAACAAATATATCAGATACGAAAGAATGAGAAGAGCCTGAATCAAAAAGTACACAAGTGTAGTGCCCAAGAACTAACAGTGTACGTGTCACCACCGCACTGGGGTCACCAGCCTTCTTGCTGGTAGTGGCATGAGCTAAACCCTTTTGGCTGCTGGTACTAGCGTGATTGCAACCGAAAGACCTCCTAGAATCAGAATTTTTGCCTTTAGGGCACTTTGCCGCCATGTGCCCTTCCTTTCCACATCTGAAGCACAATCTTGTGCCGGCTAAGCACTGACCTTCATGACGCCCTTCGCACTTTGGATAGAAAGGTTTCTCCTTGCCAGCACTACTCTGGAGCGTGGACCGACGATTCTTAGAATTTCGTTGAGACTTTGAGGAACCTCGATCAAACTTCCTTTTTTGGCCTGCACTGGGCTCTGGCTCCTTAACCACCGGGGTAGCATTCACAGTTGGCATACCCATAACGTAGTCGCTCGAAGGGTTGTATCATAATCGGCTGAGGAAAGGGCCCCTACAACCCGCTGCACATCATCTCTGAGGCCCAGGATGAACCTCTTAGTCTTCTTAGCTTCAGTATCCACTATCTCTGGGGCAAAGCAGGACAACCGCGTGAACTCCAGCTCGTACTCCTCCACCGACTTGTCACCCTGCTTCAAAGCCATGAACTCTGCCTCCTTCCTGTACCTGAGGATCGCAGAGTATTACTTTTGGAAAAACGCCTCCTTGAACTGGAGCCATGTGACATGACCTGTGGTGTATCAATGGATCTCTCTGCAGACAGCCACCACAACGGCGCATCCTCCCTCAACATAAATGCAGCACATGGGACTTACTGAGTCTCGGGGCACCCCATGTATCAGAAGATCTCCTCCATTGTGACCGTCCAAGCCTCCACAGCAGTAGGGTCCACCATCTTCCCGTTGAACGACAGCAGGTCATACTTCTTGAAATCTTTCAAATACCTGGAGCCCTCAGTCGACCCCACCTGATTCTAGTTTTGATTCGCCTGAGATGCCTGATTGGCAGCGACATTGCTTAGGAGCGCCTGCAGAGCTTCCAACGTCAGGGTGACCGTCTGTGCCTATGCAGGTTGTGCAAGCATCTCACCCTCTGGTTGATTGACATCTTGGGGATCTACTTGACCTGGAGGTACATGACCCCCACCACGTCCACATGCTCGACCGTGTGGAGGCATAGTCTAAAAAGAAAAAGGTATCAAATGGTCAAGCTAACATCTTCCAAACTGTGTTCATCCTATCCTAGCTAGCTAGATTGAACTAAGTTAAGTTTCATGCATAACATAAATCATCATTCATACACTCTTTCCTACTTGGTACTCACATACCTGGCGATGACGAGGCTTGATTACTTGCGCTTGGCTATGGGGAGATTTGATGCTTACGATGTAAGCGAGTCTACAGAACCTATAAACTAGGCTCTGATACCAACTGTAACGACCCGACTAGAAGGAAACCAAAATATACATAAGATTGCTACTAAATCATAGACAAATTTTTTTTTTTCTTTTTAAAACAAACACAAGCAGAAGAAATCAATAACTTTCATTTACTAAGAGGGCCCAAAACATAATTTAAGTTCATAAATCTTAAAATGGAATATCTGAAACATAATCCTGAAAAACTCATAGTTTTAAAACATCACATCTAAAACAAGAGTTCGATCCTACGACATCAGAGACTAGAAATAATCAAAGGAATGGAGACGTAAACTGCAGCTGCGATCCCATAGTCAACGAAGTCACAGCTCTCGCCAAGCGTCGGTCATCCTCAAGTACCACCTGAAAAAGAAAGTCATGCAGCATGGGTGAATATATAAGAATATACTCAGTAAGTAGCCCACTTAGGGGTCGAATCATATAATCATAAAATCGGGTAGCATGAAACTTAGCTTCCGGGTTTTAACGTCATAGGAACCTAACTAGAAACATCAATTAGGGTTGCTAACCCCGAGGCCATAATCATGTTCAGGTAATGATCTCCCTAGGGTGGTTTCCTGCCCCCAACCTGTGCCAACTATGGTGTTGTGTGGGTCAGTCAAGTAAGGCGAGTAAACTAGGGACTAGCTGGCAACCTCTAGCAGCACTACACCTATCCCTACACAAAGATGGACAAACATCCTCAAATCAAAAGGAGTTTTATTCCAAACTCACACCTAGAAGCCAAAGTAAATTTTGGGATGTTTTAATGGTTTTGTGTGTTCTGGACACAACTAGAACTTGATGGAAAACCCCCTTTTTCTTAAAAAAAGAAAGAAAGAAAATGAAGATTGAAAAAGAAAAGAAGAAAGGAAGAAGAAAAAGGAGAAAAAGAAAAAAAAACTTGTTGTCGGTGGCTGACTTGCGGCAAGCAGCGGCCGACGGCTTTAACAGTGTGTGGTGGCTGGTGGTGATAGTGATGAAGAAGAAGAAGATGATGGAGAGAGAAAGAAATAAATTTATTAAAAATAATAATATTTTTATTATTTTTATTTAAAAAGAATTTTTTTAATAAAAAAAATCCAAACCTCAGGGACTAGATTGTCAAGTTTGAAAATTCTGAGACCAAAATGAAACCTAATTTAAACCTCAAGGACCAAAAATGTATTTTTCCCTAAAAAAAAGATGGTCAAGAAATGATTTTAAAACATTAATGAAAATAATATAATAATAATAATAATAATAATAATAATAATAAAATCTAAAAATCAAATGCTCAAAATATGATTAATGAGTTACCACATTAGTGTCGATATGTTCATCTAAAACAGATACAATCAATATTTAATATCATTCATTTATATGGAGAACAATATAAACACAATATAAAATACAAAGAAAATAATAAGCGAGCTCTTCTGGTTTCTCGAAAATATTAATAATAATAATACAATATAAAAAATGAACGAGGTCTTCCTTAAATATTCCAATTTTCTGAGCCCAAACCCAAAACATTTCATTAATTGGGCTGGACCGGGAAACCCGTACGTGTTTGAACCGGCTATGGACGTCCCACTTCAACTTTCATGTTTGAATCGACGAAGAAAAAAGGGGCAGTTGCATAGATGGCAAATTGGACCAAATTAATAGCAAATATAGCAAAATTAATTGTACAAGACCAAAAAGCTGTTGTCAGATTCTATCCATGTCTATCATTGATAGACTTTGATTATTCAAAGTATATCAGTGTCTATCGCTGATAGACTTTGATTAATCAAAGTCTATCAGTGACTATCACTGATAGACTTTGATTAATCAGAGCCTATTAGTGATAGTCACTGATAGATTTTGATTAACCAGAGTTCATCAGCGATAGACTCTGAATAATCAGAGTCTATCAGTAGACTGATAGATTCTGATTAATCAGAGTCTATCGCTGATAAACTCTGATAATCGAAGTCTATCAGATAGACTCTGATAGATTTTGCTATATTTGCAATTTTTTTTACATGGTGCTATATTTGCTATTAATTTGGTCCAATTTGCCACCCACTGCAATTTTCCAAGAAAAAACCAGATACTTCTCGTCTTTGTTAATCGTTTCACTGTCTTCAAACCGCGATCAGTGAAGCAAAAACGGAGAAAAGAAAAATCCCGAGCACAAGCACATCGAGAGAAGGGGTAAAATTTCCTATTTGTAGTTTCCATTTCATTTTGATGTTTTGTTAGCTTTCGCTTTGGGCTACTAATGCTTCAATTACTAGGGTCATAGTAGAGGTATAATCTATTCTGTTTATTTTGTGATCCCAATCTTTATCTTGTTAGCTTATGGCCGATAATCTGATTTGAGGAAAAGATAGTCATGATTCGAACAGGGTGTCTTCTTTTCGAGTCCATTTTGCATTCATTTTTTGGCGATTGGCAAGAGCTTCCACTCTCTTGATTGGAATTTCCTTTCGGTTTGGCTTTCGAATGCATTGTTTTTTTCTTTAATGTTTTGCACTTCATTAAAAACTCTATGTTTAGGATTATTAGTAGAAGGGAATCTCAGAGTAGATAAATTTTTTATAGTCTGAATGTATTAGTAAATTTGGCATCTTTTGGTGATTGATTGTTGTCTCTGAAGATGTTATTATAATGTAGTCGTAATTAGCCGATTGGTCTTTTACATTTTTCCTAGATATGCTTTCTTTGTGACATTTTGTTGAGCACCTTTGATAGTTGAATCTGTAAGAGCTTTCATTTTTTTTTCCTCTTGACTGTGACATACTAGAGTTTTCTTGGCGTAGGTAGGTTTAGTTAGTGTCTGTCTCAAGAGACCTCAAGTTGGAGCACAATTGAAACTATCTACTTAGTCAATTTGTTTCTAACCTTTATAGCTTATGCTGTGTGTTACAATATTCGTATATACGCATTATGTTTACCTTTTGACTTAAATTTCCATGGTCCATGGCAAATTTATCTACTGCAGCTTTAGTATTGTAAAATTTTACAAATGAATTATGGGGCACAAATGGTTGCCCTGCCCTGCTGTTTTTACTTGAAATAGGCGTCCAAGTACTGCATTGACTTACTCGTGAGAAAAAAATGGTCGGTGTGTGTGTTTCTAGGCTACCCAAAGGAAGCCTGAGGATATAAGCTTTTGTATTTTTCTGAAAAGGGATGTGTAGTCAATAGGGGGTGTTATATTCAGCAAGAGGAAATGTTCATTGACTCAGAAAAGAAGCAGGAAACTAACAGTCAACTATTGGAAAGGGAGAGAATTGATTTCGAGGTGGAGCTAACATGACCTATACAAACTGAAACAACCACCAGTTAGCCCCAACAAACAGATACTTTGATCGATTAGGCTCCATTTGATAACCATTTGGTTTTTGGTTTTTTATTTTTGAACATTATGTTTGTTTTCTCCTAATTTGCTTACAATGATTTTCATCTTTGTTAAGGAAATATTTGAATTTTTAACCAAATTCCAAAAGAAAAACAAGTTTTTGAAAACTACTCTCTTTTTTTTTTTTTTTTTTTTTAGTTTTCAAAACTTGACTTGGTTTTTTTTTTTTTTTTTTTTTTGAGGAAACTTGACTTGGTTTTTGAAAACATGAGAAGAAGATAGGTAATAAAACAAAGAAGCTTATAGATACAAGCTATGAAGCACGGACACTTACATATAGGGGAGGAATCTGTGTTGGACATGGATACGCCCGGACACGCGTCGGACACGCAAATATATATATTTTTTTTTTAACTAAAGACATGCTGGGACATGCAGTTGGACACGCCAAAGGGACACGGCTGAAATTTTTTGGGAAATTGTGGTAGATGGTTATAAAAAATAAGCCCTTGCGTTTTTTTGGCTAAAAAAGTTTCGTATTTTCAGGTGTGGCTACTGCAAATCAAGGAATGACCAACCAGTTTTTTTCTTCCCATTTTACCCCTGGTATATATGTGTATATACAGACACCGTTTACAATGCCGTTACATGCCCGAGATCCTTTTTTCCAAATTTTATGGGATTCTTGCCGTTTTGGTCTCTAACTGAATTCCATAGATTTCGTTTTCTTCTCCAGTCTAACAATTCGGTTTGGGTCTCATTGGGTCGGGTTGTTTGTACAACTGACCCAACCTGAAAATTTTCACCCCTAGTGGTGGGATCTAAATCTTGACGAACATAAAGAAACTATTTCCATGGAACAACCTGTGGTTTATCAAGAAAAGTACCAAAAAAATCCTGTTTGTTTGCTTAAGAGTCATTTTACAGTCTTGAGCCATCCCCAAGGTGTTGATACCACAGATTTGTTTTTAGGAGCTAGTTGTGGCATTCAAAACAAAAAATAAAATTAAAAATTAAAAATTAAATAAACACAAGGAATAAACAATTAAGGAGTAATTCAAGAGACACCAGTAGTTCTGAATCGAGGTTCCAAAAATCTATCCTATGTTATTTAACTTCAACCTTACTTCCCTATTGAAACCCTTTGCAGCTCACTATCCTTTTATGATCAATTAAATTGGTCCTGCATCTTTCGTGTATGTGAAGTATCAAGTATTGAGGGTCTCTCAATTTTATTTTGTCACCAATATTGGCTTAGAAAGAAGCTTACATGAGGTTAGCCTACTTTCTTTTCTATGTAGTAAGTAGGTAGGCAAGATAGAAGGGGGCTCCAAGAACAATATGTTCAAAACCCTCAAGTTTGAGTGAAATACCTGAAAAAGCTAAAATAATCTTTAGGCTTGAAATCTCAAGAAATAGAAAAAGGATGAATTGTTGATCAACCAAGCGGCATCCTTTAACCTTGACAAAATTCAACATGGACTTTGCAGTGCTAAAGCAGTGAAGGTTCCGCTTGTAACACACCCTTTAGGTATCAGTCACAACCTCATCGGATGAAAAAAAAAACTTAACTTGCTATATGTAGTTCTAAATATTATCTTCTCTTATGTTAAAATGAACTGAAATTAATTTCTTTGTAGCTGAACTTTTTTAAAAAAAATTATATTCCTTTTTCTTTCTTATTATGGTGGTAACTCTGATGCCAGGTTTAAAACCAATGGAACAACAGAAAGAGAAACCCTCAGCTGCTGCAAACCCACCCATCCCCTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTCTTGGAGGACTTGAAGGATCACATCGACGAGTTCATTAACGCATCGATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGGTTTACTTCCATTTCCTACTCTGAGACCTGAAAGAAGTAATCATGTTTCTGATATATGTGGTGGATGTGTTCGTTTACAAATTTCAAAATCTTTTTGGTTGGTTACAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGAATTCAGAGACAAGTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAGTATCAGAATAAATTCTCTTTTTCTTCCTTTGTTCAGGGATAGTCTGTCTGTATCTTGAACCAACTCCATGTGAGATTTTACTTATGTCCATGTGAGA

mRNA sequence

ATGCCTGCACACCCGGCACAGGCACAGACGACCCTGACAGATGATGTGCAGCCGGTTGTAGGGGCCCTTGCCCCAGCAGATTATGCCGCAGCCCTTCGAGCGACTATGTTTATGGGTATGCCAGCTGTGAATGCTACCTCGGTGGTTAAGGAGCCAGAGCCCACGACATTGCTTAGGAGCGCCTGCAGAGCTTCCAACGTCAGGGTGACCGTCTGTGCCTATGCAGGTAATGATCTCCCTAGGGTGGTTTCCTGCCCCCAACCTGTGCCAACTATGGTGTTGTGTGGGTCAGTCAATGCTAAAGCAGTGAAGGTTCCGCTTGTAACACACCCTTTAGGTTTAAAACCAATGGAACAACAGAAAGAGAAACCCTCAGCTGCTGCAAACCCACCCATCCCCTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTCTTGGAGGACTTGAAGGATCACATCGACGAGTTCATTAACGCATCGATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGAATTCAGAGACAAGTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAGTATCAGAATAA

Coding sequence (CDS)

ATGCCTGCACACCCGGCACAGGCACAGACGACCCTGACAGATGATGTGCAGCCGGTTGTAGGGGCCCTTGCCCCAGCAGATTATGCCGCAGCCCTTCGAGCGACTATGTTTATGGGTATGCCAGCTGTGAATGCTACCTCGGTGGTTAAGGAGCCAGAGCCCACGACATTGCTTAGGAGCGCCTGCAGAGCTTCCAACGTCAGGGTGACCGTCTGTGCCTATGCAGGTAATGATCTCCCTAGGGTGGTTTCCTGCCCCCAACCTGTGCCAACTATGGTGTTGTGTGGGTCAGTCAATGCTAAAGCAGTGAAGGTTCCGCTTGTAACACACCCTTTAGGTTTAAAACCAATGGAACAACAGAAAGAGAAACCCTCAGCTGCTGCAAACCCACCCATCCCCTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTCTTGGAGGACTTGAAGGATCACATCGACGAGTTCATTAACGCATCGATGGACGAACACAAATCGTGCTTCAAGAAGACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAGGAATTCAGAGACAAGTGGAGTTGAAAGTTCTCTGCCTCTTCGAACAACAGTATCAGAATAA

Protein sequence

MPAHPAQAQTTLTDDVQPVVGALAPADYAAALRATMFMGMPAVNATSVVKEPEPTTLLRSACRASNVRVTVCAYAGNDLPRVVSCPQPVPTMVLCGSVNAKAVKVPLVTHPLGLKPMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNSETSGVESSLPLRTTVSE
Homology
[Close]
BLAST of Spg000417.1 vs. NCBI nr
Match: KAG6605077.1 (Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-40
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 113 GLKPMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTI 172
           G KPMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTI
Sbjct: 275 GSKPMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTI 334

Query: 173 NKMFRMSKVVADRNSETSGVESSLPLRTTVSE 205
           NKMFRMSKVVAD+NSETSGVESSLPLRTTVSE
Sbjct: 335 NKMFRMSKVVADKNSETSGVESSLPLRTTVSE 366

[Close]
BLAST of Spg000417.1 vs. NCBI nr
Match: KAA0045538.1 (uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 116 PMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKM 175
           PMEQQKEKPS AANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKM
Sbjct: 52  PMEQQKEKPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKM 111

Query: 176 FRMSKVVADRNSETSGVESSLPLRTTVSE 205
           FRMSKVVADRNSET+GVESSLPLRTTVSE
Sbjct: 112 FRMSKVVADRNSETNGVESSLPLRTTVSE 140

[Close]
BLAST of Spg000417.1 vs. NCBI nr
Match: XP_004148843.1 (uncharacterized protein LOC101211034 [Cucumis sativus] >KGN61795.1 hypothetical protein Csa_006035 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPS AANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVADRNSET+GVESSLPLRTTVSE
Sbjct: 61  RMSKVVADRNSETNGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. NCBI nr
Match: XP_023006871.1 (uncharacterized protein LOC111499535 [Cucurbita maxima] >XP_023006872.1 uncharacterized protein LOC111499535 [Cucurbita maxima] >XP_023533150.1 uncharacterized protein LOC111795127 [Cucurbita pepo subsp. pepo] >XP_023533151.1 uncharacterized protein LOC111795127 [Cucurbita pepo subsp. pepo] >XP_023533869.1 uncharacterized protein LOC111795589 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-38
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVAD+NSETSGVESSLPLRTTVSE
Sbjct: 61  RMSKVVADKNSETSGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. NCBI nr
Match: KAG7035086.1 (hypothetical protein SDJN02_01881 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-38
Identity = 85/88 (96.59%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVAD+N+ETSGVESSLPLRTTVSE
Sbjct: 61  RMSKVVADKNTETSGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match: A0A5A7TRS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00290 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.7e-39
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 116 PMEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKM 175
           PMEQQKEKPS AANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKM
Sbjct: 52  PMEQQKEKPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKM 111

Query: 176 FRMSKVVADRNSETSGVESSLPLRTTVSE 205
           FRMSKVVADRNSET+GVESSLPLRTTVSE
Sbjct: 112 FRMSKVVADRNSETNGVESSLPLRTTVSE 140

[Close]
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match: A0A0A0LIQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247070 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.7e-39
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPS AANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVADRNSET+GVESSLPLRTTVSE
Sbjct: 61  RMSKVVADRNSETNGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match: A0A6J1KX05 (uncharacterized protein LOC111499535 OS=Cucurbita maxima OX=3661 GN=LOC111499535 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVAD+NSETSGVESSLPLRTTVSE
Sbjct: 61  RMSKVVADKNSETSGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match: A0A1S3CDL9 (uncharacterized protein LOC103499674 OS=Cucumis melo OX=3656 GN=LOC103499674 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.3e-38
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPS AANPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSTAANPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVADRNSET+GVESSLPLRTTVSE
Sbjct: 61  RMSKVVADRNSETNGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match: A0A6J1G5B9 (uncharacterized protein LOC111450996 OS=Cucurbita moschata OX=3662 GN=LOC111450996 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 9.6e-38
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           MEQQKEKPSAAANPPI SCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMF
Sbjct: 1   MEQQKEKPSAAANPPITSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMF 60

Query: 177 RMSKVVADRNSETSGVESSLPLRTTVSE 205
           RMSKVVAD+NSETSGVESSLPLRTTVSE
Sbjct: 61  RMSKVVADKNSETSGVESSLPLRTTVSE 88

[Close]
BLAST of Spg000417.1 vs. TAIR 10
Match: AT4G39235.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 4.3e-22
Identity = 51/76 (67.11%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 130 PPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMFRMSKVVADRNS-E 189
           P + SCRKK  ++ATF ED+KDHID+FI+ASMDEHKSCF+KTI KMF +SK VA++ + E
Sbjct: 11  PAMTSCRKKVKDDATFFEDVKDHIDDFIHASMDEHKSCFQKTIKKMFGLSKAVAEKQAVE 70

Query: 190 TSGVESSLPLRTTVSE 205
             GVES LPL+TTVSE
Sbjct: 71  AKGVESQLPLQTTVSE 86

[Close]
BLAST of Spg000417.1 vs. TAIR 10
Match: AT3G05570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits to 73 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-22
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 117 MEQQKEKPSAAANPPIPSCRKKKNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKMF 176
           ME QK +      P   SCRKK  ++A FLED+KDHID+FINASMD+HK+CF KTI KMF
Sbjct: 1   METQKTQAENPPKPATSSCRKKTKDDANFLEDVKDHIDDFINASMDDHKNCFNKTIKKMF 60

Query: 177 RMSKVVADRNSETS--GVESSLPLRTTVSE 205
            +SK VAD+    +  GVES LPL+TTVS+
Sbjct: 61  GLSKAVADKQQSEAKGGVESYLPLQTTVSD 90

[Close]
BLAST of Spg000417.1 vs. TAIR 10
Match: AT2G21640.1 (Encodes a protein of unknown function that is a marker for oxidative stress response. )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0 

Query: 129 NPPIP-----SCRKK-KNEEATFLEDLKDHIDEFINASMDEHKSCFKKTINKM---FRMS 188
           NPP P     SCRK+ K++ ATF  +LKDH+DEFI+ASMDEHK+CFK T++K+   F  +
Sbjct: 19  NPPKPQVPASSCRKRVKDDNATFFANLKDHMDEFIHASMDEHKTCFKNTMDKIFGSFSKA 78

Query: 189 KVVADRNSETSG-VESSLPLRTTVSE 205
           + VA++  E    VE   PL+T V++
Sbjct: 79  EAVAEKQIEAKEVVEIHSPLQTAVTK 104

The following BLAST results are available for this feature:
BLAST of Spg000417.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605077.14.3e-4096.74Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAA0045538.11.8e-3896.63uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa][more]
XP_004148843.11.8e-3897.73uncharacterized protein LOC101211034 [Cucumis sativus] >KGN61795.1 hypothetical ... [more]
XP_023006871.12.3e-3897.73uncharacterized protein LOC111499535 [Cucurbita maxima] >XP_023006872.1 uncharac... [more]
KAG7035086.15.2e-3896.59hypothetical protein SDJN02_01881 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Spg000417.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg000417.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TRS78.7e-3996.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LIQ48.7e-3997.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247070 PE=4 SV=1[more]
A0A6J1KX051.1e-3897.73uncharacterized protein LOC111499535 OS=Cucurbita maxima OX=3661 GN=LOC111499535... [more]
A0A1S3CDL93.3e-3896.59uncharacterized protein LOC103499674 OS=Cucumis melo OX=3656 GN=LOC103499674 PE=... [more]
A0A6J1G5B99.6e-3896.59uncharacterized protein LOC111450996 OS=Cucurbita moschata OX=3662 GN=LOC1114509... [more]
BLAST of Spg000417.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39235.14.3e-2267.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G05570.15.6e-2258.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G21640.12.3e-1248.84Encodes a protein of unknown function that is a marker for oxidative stress resp... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..204
NoneNo IPR availablePANTHERPTHR33622:SF10DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPFcoord: 118..204
NoneNo IPR availablePANTHERPTHR33622FAMILY NOT NAMEDcoord: 118..204

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg000417Spg000417gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg000417.1-three_prime_utrSpg000417.1-three_prime_utr-scaffold8:37323864..37323949three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37323950..37324042CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37324151..37324335CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37324511..37324551CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37328750..37328819CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37329719..37329781CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37331072..37331196CDS
Spg000417.1-cdsSpg000417.1-cds-scaffold8:37331724..37331761CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg000417.1Spg000417.1-proteinpolypeptide