Spg000108.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg000108.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CASP-like protein
Location	scaffold6: 23180966 .. 23182008 (+)
Sequence length	558
RNA-Seq Expression	Spg000108.1
Synteny	Spg000108.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCCTCCCCAAATTCCCTCTCCCAAAGCCCAAAACAAAGCCTTATATTTACATCCCCTTCTCCCACTCTCACAGAGCTCTGTGAGAGCTTCTTCAATCAATCAAGCAAGCTTCAGCAAATCAAAAATGGCAGAAACCAATAACTCCTCCATTATTTCCAGCCACCGCCCTCCACTCCTCAAACTCATCGACTTCTCTCTAAGACTATTCTCCGTTCCTCTCAGCGTCGCATCCATCTGGCTCACTGTCACCAACCGACAAGACAACCCCGATTACGGCACCTTAGAGTTTCACAATCTCACTGGCCTCAAGTAACCTTCAAAAAACAGAGCATCAATTTTTGTCCCCTCGGTTTCCTCCAACTCTTCTCATTGACTGAATTGGGCTGATTTTTGATTCATTATCAGGTACATGGTCTGCATATCCGCCATCGCCGCCGCATACGCTTTGTTCGCCGCCGCGTTTTCTTGGGTCCGCCGCTTCGCCGCCAAGGCATGGGTGTTCTTCGTTTCTGACCAGGTTCATCAATTTCCCTTGCATTCAATTCGAGTGAAATTAAATGTAGAGTAGTGCATCAGGGTTTTGGGTAATTTATTGGGAATTTCATGTTTGAATTTGTAAATGTTGTGGGTGGTTCAGATAGTGGCATATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTGTGTATTTGGCATACAATGGAGACAGAGAGGTTTCGTGGAGTGAAGCTTGCAGCTCGTATGGGAAGTTCTGCAACAAGATGAAACTGGCTCTGATTTTTCAAGCTCTGGGATTTGGATGCATTTTTGTGGTGGCTCTCATCTCTGCTTTTAGAGCTTTTAGTATCTTCGACCCTCCCCTTTCCTCTCAACAGATTCAACACCAAACCAATTAGATCTTTAATTTCTAACATCTGTAATGCCTTTACCAAATAACTTTTATGTTATTGTTCTACAAGGAAAAAGTAAACTTTTAAATACTTGTAAGAAATGAGATTTGTTTTAAAGATATATATTGGTGCTTCTTTTGTTCGGTG

mRNA sequence

ATGGCAGAAACCAATAACTCCTCCATTATTTCCAGCCACCGCCCTCCACTCCTCAAACTCATCGACTTCTCTCTAAGACTATTCTCCGTTCCTCTCAGCGTCGCATCCATCTGGCTCACTGTCACCAACCGACAAGACAACCCCGATTACGGCACCTTAGAGTTTCACAATCTCACTGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCATACGCTTTGTTCGCCGCCGCGTTTTCTTGGGTCCGCCGCTTCGCCGCCAAGGCATGGGTGTTCTTCGTTTCTGACCAGATAGTGGCATATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTGTGTATTTGGCATACAATGGAGACAGAGAGGTTTCGTGGAGTGAAGCTTGCAGCTCGTATGGGAAGTTCTGCAACAAGATGAAACTGGCTCTGATTTTTCAAGCTCTGGGATTTGGATGCATTTTTGTGGTGGCTCTCATCTCTGCTTTTAGAGCTTTTAGTATCTTCGACCCTCCCCTTTCCTCTCAACAGATTCAACACCAAACCAATTAG

Coding sequence (CDS)

ATGGCAGAAACCAATAACTCCTCCATTATTTCCAGCCACCGCCCTCCACTCCTCAAACTCATCGACTTCTCTCTAAGACTATTCTCCGTTCCTCTCAGCGTCGCATCCATCTGGCTCACTGTCACCAACCGACAAGACAACCCCGATTACGGCACCTTAGAGTTTCACAATCTCACTGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCATACGCTTTGTTCGCCGCCGCGTTTTCTTGGGTCCGCCGCTTCGCCGCCAAGGCATGGGTGTTCTTCGTTTCTGACCAGATAGTGGCATATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTGTGTATTTGGCATACAATGGAGACAGAGAGGTTTCGTGGAGTGAAGCTTGCAGCTCGTATGGGAAGTTCTGCAACAAGATGAAACTGGCTCTGATTTTTCAAGCTCTGGGATTTGGATGCATTTTTGTGGTGGCTCTCATCTCTGCTTTTAGAGCTTTTAGTATCTTCGACCCTCCCCTTTCCTCTCAACAGATTCAACACCAAACCAATTAG

Protein sequence

MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQIQHQTN

Homology

[Close]

BLAST of Spg000108.1 vs. NCBI nr
Match: XP_022942434.1 (CASP-like protein 2D1 [Cucurbita moschata])

HSP 1 Score: 297.7 bits (761), Expect = 6.7e-77
Identity = 152/185 (82.16%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+N        PP+LKL+D SLRLFSVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNP------HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVCISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC+KMK+AL+FQALGFGC FVVA++SAFRAFSIFDPPL SQ +
Sbjct: 121 YGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. NCBI nr
Match: KAG6600786.1 (CASP-like protein 2D1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031424.1 CASP-like protein 2D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 152/185 (82.16%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+N        PP+LKL+D SLRLFSVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNP------HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVCISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC KMK+AL+FQALGFGC FVVA++SAFRAFSIFDPPL SQ +
Sbjct: 121 YGDREVSWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. NCBI nr
Match: XP_022984776.1 (CASP-like protein 2D1 [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 151/185 (81.62%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+NS       PP+LKL+D SLRL SVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNS------HPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVCISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC+KMK+AL+FQALGFGC FVVA++SAFRAFSIFDPPL S  +
Sbjct: 121 YGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. NCBI nr
Match: XP_023545873.1 (CASP-like protein 2D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 4.8e-75
Identity = 150/185 (81.08%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+N        PP+LKL+D SLRLFSVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNP------HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMV ISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVSISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC KMK+AL+FQALGFGC FVVA++SAFRAF IFDPPL SQ +
Sbjct: 121 YGDREVSWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. NCBI nr
Match: XP_038903731.1 (CASP-like protein 2D1 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 141/185 (76.22%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           MAE NNSS I        KL+DFSLRL SVPLS+A++WLTVTNRQDNPDYG LEFHNL+G
Sbjct: 1   MAEPNNSSPI--------KLVDFSLRLCSVPLSIAALWLTVTNRQDNPDYGNLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKY+VCISAIAA YA  AA  S  R F  KAWVFFVSDQIVAYLMVTS AAVGEI+YLAY
Sbjct: 61  LKYLVCISAIAATYAFLAAVVSCFRWFLVKAWVFFVSDQIVAYLMVTSGAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
           NGDREVSWSEACSSYGKFCN MK+ALIFQALGF C F++A+ISAFRAFS+F PPL S Q 
Sbjct: 121 NGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFILAIISAFRAFSVFHPPLISSQ- 174

Query: 181 QHQTN 186
             QTN
Sbjct: 181 --QTN 174

[Close]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot
Match: A7P0P3 (CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.3e-58
Identity = 117/183 (63.93%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M+    ++ ISS   P LKLID SLRL  +PLSVA+IWLTVTN+QDN  YG LEF NLTG
Sbjct: 1   MSNLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCIS I+A YAL A   SWVR    KAW+FFVSDQI+AYLMVTS AAV EI+YLAY
Sbjct: 61  LKYMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDR VSWSEACSSYG+FC+++ LAL   AL   C  V+A+ISA+R FS+F+PP+SS+++
Sbjct: 121 KGDRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEV 180

Query: 181 QHQ 184
           + +
Sbjct: 181 EEE 183

[Close]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot
Match: B9HTL5 (CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55
Identity = 109/164 (66.46%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 17  LLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAYAL 76
           +LKL+DFSLRL  +PLSVA+IWLTVTN+QDN  YG L++ +LTGLKYMV IS I A+YA 
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 77  FAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSSYG 136
            AA  +W+R    K W+FFVSDQIVAYLMVTS  AV EI+YLAYNGDREVSWSEAC+SYG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 137 KFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 181
           KFC +MKLA+I  AL   C  ++A+ISA+RAFSIF+PPL   ++
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSKV 164

[Close]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot
Match: C6T2J5 (CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55
Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 5   NNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYM 64
           ++S+   +H  P+L   D SLRL ++PLSVA++W+TVTN++DN  YG L+++NL+ LKYM
Sbjct: 6   DDSASGKNHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYM 65

Query: 65  VCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDR 124
           V +SA+ A YAL AAA S VR F +KAW+FFVSDQIVAYL +TSVAAV E+ YLAYNG +
Sbjct: 66  VLVSALCACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAK 125

Query: 125 EVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPP-LSSQQIQ 182
           E SWSEACSSYG FC+K+KLALI   + F C FV+A+ISAFRAFS+FDPP ++SQ++Q
Sbjct: 126 EDSWSEACSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQEVQ 183

[Close]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot
Match: B9SV84 (CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-53
Identity = 104/164 (63.41%), Postives = 130/164 (79.27%), Query Frame = 0


Query: 16  PLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAYA 75
           PLLKL+D SLR+  +PLS A+IWLTVTN QDN  YG L++ N+ GLKYMVCISAI A+YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 76  LFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSSY 135
             AA   W++    K W+FFVSDQI+AYLMVTSVAA  EI+Y+AYNGD++V+WSEAC+SY
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 136 GKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQ 180
           GKFCN MK ALI  AL      V+A+ISA+RAFS++ PP+SS++
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSKE 166

[Close]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot
Match: Q9FFT2 (CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-43
Identity = 90/164 (54.88%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 15  PPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAY 74
           P  LK+ID  LRL  VPLSVA+IWLTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 75  ALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSS 134
           AL +   SWV    +KAW+FF+ DQ++AY+M TSVA   EIVYL   GD+ V+WSE CSS
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 135 YGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQ 179
           Y  +C+K+ +AL            +++ISA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]

BLAST of Spg000108.1 vs. ExPASy TrEMBL
Match: A0A6J1FRA5 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447478 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.3e-77
Identity = 152/185 (82.16%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+N        PP+LKL+D SLRLFSVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNP------HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVCISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC+KMK+AL+FQALGFGC FVVA++SAFRAFSIFDPPL SQ +
Sbjct: 121 YGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. ExPASy TrEMBL
Match: A0A6J1J679 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482956 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.5e-77
Identity = 151/185 (81.62%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ET+NS       PP+LKL+D SLRL SVPL++ASI LTVTNRQDNPDYGTLEFHNL+G
Sbjct: 1   MEETHNS------HPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKYMVCISAIAAAYALFAAAFSW+R FAAKAWVFFVSDQIVAYLMVTSVAAVGEI+YLAY
Sbjct: 61  LKYMVCISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQI 180
            GDREVSWSEA S+YGKFC+KMK+AL+FQALGFGC FVVA++SAFRAFSIFDPPL S  +
Sbjct: 121 YGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHL 179

Query: 181 QHQTN 186
           QHQ+N
Sbjct: 181 QHQSN 179

[Close]

BLAST of Spg000108.1 vs. ExPASy TrEMBL
Match: A0A5D3BS29 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00020 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 134/177 (75.71%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           MAETNN        P L K +DFSLRL SVP S+A++WLTVTNRQDNPDYG LEFHNL+G
Sbjct: 1   MAETNN--------PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKY+VCISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEI+Y+AY
Sbjct: 61  LKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSS 178
           NGDREVSWSEACSSYGKFCN MK+ALIFQALGFGC F++A+ISAFRAFS+F PPL S
Sbjct: 121 NGDREVSWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLIS 169

[Close]

BLAST of Spg000108.1 vs. ExPASy TrEMBL
Match: A0A1S3CJM6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 134/177 (75.71%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           MAETNN        P L K +DFSLRL SVP S+A++WLTVTNRQDNPDYG LEFHNL+G
Sbjct: 1   MAETNN--------PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKY+VCISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEI+Y+AY
Sbjct: 61  LKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSS 178
           NGDREVSWSEACSSYGKFCN MK+ALIFQALGFGC F++A+ISAFRAFS+F PPL S
Sbjct: 121 NGDREVSWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLIS 169

[Close]

BLAST of Spg000108.1 vs. ExPASy TrEMBL
Match: A0A0A0L6A1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.3e-65
Identity = 132/179 (73.74%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MAETNNSSIISSHRPPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTG 60
           M ETN+        P L K +DFSLRL SVP +VA++WLTVTNRQDNPDYG LEFHNL+G
Sbjct: 1   MTETNS--------PSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSG 60

Query: 61  LKYMVCISAIAAAYALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 120
           LKY+VCISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEI+Y+AY
Sbjct: 61  LKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAY 120

Query: 121 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQQ 180
           NGDREVSWSEACSSYGKFCN MK+ALIFQALGF C F +A+ISAFRAFS+F PPL S Q
Sbjct: 121 NGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

[Close]

BLAST of Spg000108.1 vs. TAIR 10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 175.6 bits (444), Expect = 3.6e-44
Identity = 90/164 (54.88%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 15  PPLLKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAY 74
           P  LK+ID  LRL  VPLSVA+IWLTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 75  ALFAAAFSWVRRFAAKAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSS 134
           AL +   SWV    +KAW+FF+ DQ++AY+M TSVA   EIVYL   GD+ V+WSE CSS
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 135 YGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPPLSSQ 179
           Y  +C+K+ +AL            +++ISA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]

BLAST of Spg000108.1 vs. TAIR 10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 57/160 (35.62%), Postives = 101/160 (63.12%), Query Frame = 0


Query: 18  LKLIDFSLRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAYALF 77
           ++  +  LRL  V L VA++ + + + + N ++G++ + NLT  +Y+V  + I A Y+L 
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 89

Query: 78  AAAFSWVRRFAA---KAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSS 137
           +AA + + R ++   + W FF  DQ++ YL++ + A   E++YLAYNGD  ++WS+ACSS
Sbjct: 90  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 149

Query: 138 YGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPP 175
           YG FC++   ++I          V++LIS+++ F+ FDPP
Sbjct: 150 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 188

[Close]

BLAST of Spg000108.1 vs. TAIR 10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 81.6 bits (200), Expect = 7.1e-16
Identity = 49/153 (32.03%), Postives = 90/153 (58.82%), Query Frame = 0


Query: 25  LRLFSVPLSVASIWLTVTNRQDNPDYGTLEFHNLTGLKYMVCISAIAAAYALFAA-AFSW 84
           LR+ S+ LS+  + + + N   N ++G++ + N+    Y+V  + + AAY+L +A A   
Sbjct: 27  LRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLSALAILA 86

Query: 85  VRRFAAKAWV--FFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSEACSSYGKFCNK 144
           +    +K  V   F+ DQ+V Y+++ + A   E VYLAY G+  ++WS AC SYG FC+ 
Sbjct: 87  LPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCHN 146

Query: 145 MKLALIFQALGFGCIFVVALISAFRAFSIFDPP 175
             ++++F  +      +++LIS++R F+ F+ P
Sbjct: 147 ALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of Spg000108.1 vs. TAIR 10
Match: AT1G17200.2 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 81.3 bits (199), Expect = 9.2e-16
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 74  YALFAAAFSWVRRFAA---KAWVFFVSDQIVAYLMVTSVAAVGEIVYLAYNGDREVSWSE 133
           Y+L +AA + + R ++   + W FF  DQ++ YL++ + A   E++YLAYNGD  ++WS+
Sbjct: 16  YSLLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSD 75

Query: 134 ACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIFDPP 175
           ACSSYG FC++   ++I          V++LIS+++ F+ FDPP
Sbjct: 76  ACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 119

[Close]

BLAST of Spg000108.1 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 68.6 bits (166), Expect = 6.2e-12
Identity = 50/171 (29.24%), Postives = 85/171 (49.71%), Query Frame = 0


Query: 18  LKLIDFSLRLFSVPL-------SVASIWLTVTNRQDNPDY---GTLEFHNLTGLKYMVCI 77
           +KLID  +RL  + L       ++ ++ L VT+ +    +    T ++ ++  + ++V  
Sbjct: 1   MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query: 78  SAIAAAYALFAAAFSWVRRFAAK-------AWVFFVSDQIVAYLMVTSVAAVGEIVYLAY 137
           + IAA Y+L  +    V     K       AW FF  DQ +AYL V ++AA  E   +A 
Sbjct: 61  NGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query: 138 NGDREVSWSEACSSYGKFCNKMKLALIFQALGFGCIFVVALISAFRAFSIF 172
            G+ ++ W   C+ YGKFCN+M + +    L    +  V+ ISAF  F ++
Sbjct: 121 EGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

The following BLAST results are available for this feature:

BLAST of Spg000108.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942434.1	6.7e-77	82.16	CASP-like protein 2D1 [Cucurbita moschata]	[more]
KAG6600786.1	2.0e-76	82.16	CASP-like protein 2D1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70314...	[more]
XP_022984776.1	2.0e-76	81.62	CASP-like protein 2D1 [Cucurbita maxima]	[more]
XP_023545873.1	4.8e-75	81.08	CASP-like protein 2D1 [Cucurbita pepo subsp. pepo]	[more]
XP_038903731.1	1.3e-67	76.22	CASP-like protein 2D1 [Benincasa hispida]	[more]

BLAST of Spg000108.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7P0P3	7.3e-58	63.93	CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1	[more]
B9HTL5	1.5e-55	66.46	CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 S...	[more]
C6T2J5	2.0e-55	61.80	CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9SV84	3.2e-53	63.41	CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1	[more]
Q9FFT2	5.1e-43	54.88	CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1	[more]

BLAST of Spg000108.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRA5	3.3e-77	82.16	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447478 PE=3 SV=1	[more]
A0A6J1J679	9.5e-77	81.62	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482956 PE=3 SV=1	[more]
A0A5D3BS29	1.5e-66	75.71	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00...	[more]
A0A1S3CJM6	1.5e-66	75.71	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1	[more]
A0A0A0L6A1	8.3e-65	73.74	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1	[more]

BLAST of Spg000108.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54980.1	3.6e-44	54.88	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	1.2e-23	35.63	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	7.1e-16	32.03	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.2	9.2e-16	39.42	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	6.2e-12	29.24	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 24..166 e-value: 1.2E-21 score: 75.1
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 18..154 e-value: 3.0E-35 score: 121.2
None	No IPR available	PANTHER	PTHR11615:SF143	CASP-LIKE PROTEIN 2D1	coord: 5..183
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 5..183

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg000108	Spg000108	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg000108.1-five_prime_utr	Spg000108.1-five_prime_utr-scaffold6:23180966..23181093	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg000108.1-cds	Spg000108.1-cds-scaffold6:23181094..23181278	CDS
Spg000108.1-cds	Spg000108.1-cds-scaffold6:23181375..23181486	CDS
Spg000108.1-cds	Spg000108.1-cds-scaffold6:23181607..23181867	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg000108.1-three_prime_utr	Spg000108.1-three_prime_utr-scaffold6:23181868..23182008	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg000108.1	Spg000108.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding