Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGACCTAAATTCAAGACCGGAACTCAACGCTGGAATTCAGAATCGAGATGCAAGACTCAAGGGTTTACAAGGAACTCAAATGATTTGGAATTTGAGAAGTGGTTCCAATTAAACCTTAAGGTGGAGATGTTCACTGCCAATGTCGTGGACATGAGTTTGTGATTGGTAGACAAACGTGGGACTTCTACACAAATACCCCCTTTGGATCATTTTCGCTTCTAACTCCTCCTAGCTGGAGGATGAGGTAATGTCATTTAGAAGCACAATTGTACTAAGAAAGTGAAGGCTCTAATGTAGACATGGAACCGAAGAACTAATATAGCTCCCTGGATGCAATGTGCAGTGGTAAAAAAAGATTTGGAAGGTAGCCCACCTTCTCATGGGCAGCCCTTTGAAGTCACATAGATGGTGGACTTTTTATACTTTTTCCTTTTCCTTTTTTTTTTTTTACAAGAGAAGACTTTTTGATACTTGAGATAGTCATTTTATCTTCCTGCGCAGTAACATGAGCTTCCAGATGTGGCTCAATGCAGGTGATGCCATCTTGCGGAAGAACATGGTCAGAGCGGAACATGACTTTTATAATTTTTAGAATGCGAATAGACTGGAAGTTGGGTTAGGATACTTTTTTAGCTGCAGCTTCTTTTGTCGAGTTCTTGCTCAAAAGAGATTTGTTATTACTCTCCCTCTTCTATCTCTTCCAACTGGAGAGTTTTTCTTAACTCGTCTGGAATTGGGAGGCTTTCCCTCCTTTAGTTATATAAAAATAATTAAATAAATCAACCTCGACACACGAGGCAGGACAACCATAATTTTATCGAGCAGCAAGCATTTGTAAAGTCATCCCAAGATTACCCATTTAGTTACGAACGACTAAAGTACCGACCAGTCACAACAACATACGTGAGTTCCAAAAGCGGGAGTTCAACTGATATGCAACAGCGAAGTATATTCAATGAAAATCTTGATGATCAAACGCTAGACTAAGTTCAACCGATTTATTAAAAAAAACACACTGAATTAAGTACATAATCGGCATTAGAGCCTAGGTCGAAACAAAAAAAATTCTCCCAACTGATAGAGAAACAGAAAAATCTGATATAACAAATTGCCCATTCTTTCTGTTTTCCCTGGAAAACGAAATAATCGAGTAATTAACATGAGTCTATGATTCGAAGGGAAGGAATCAAAACGTAACAGGAAACCTTATCAACTCGTCGGAGCTTTCTTGATTCCTCTCTTCCTTGGACAGCTCCAGATTGCGAAGATACTTTTGCCCCTTGTCTGGCAATTTGCAAGCAATAGTCTCGTAGAATTTCTTCATTCTGCGAATCTTATCTTCCAGCTCGCCATCGCTAAGCTTCTGGCATTCTTCTCTTACCAAATGTTGGCGATCGGAGTCCATTTCAAAGTGTTTCAGGGGTGGGAGGTTGTGGTGGGGGCTCGATGACTACATCAGGTGGAGGCTCCTCGTCTTTACAGCCCAACAGTTTATCCCAGTCAATATTCAGAGGTCCCTTTGTCGTTTTCTCTTGCTCCATACATATGCATCTGATGCAGCAGAAATTGAAGCTATTATTTCCTCCCTCTCAGTTTACCCTCTCTATTCTTCGCAACACTCCTTTGACAGAAACAAAGTTCCTTGGTGTATTTCTTTGGCACCGGGGACATTTCTTTCCAGTCTCCTATTCCATGCATATCGTATGATTTTTTCCTTTTCTTTTTTTTCTCTTTTCTTACCAAGTTACAAGTGCGTTCCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTGACTGCTTCATAATTTTATTTGTTTTGGAAAGGCCTCTTTTGTTAGGGCTTATCGCTTATGTAGGATTTTTTTTTAAGGGTACTTGGGACACTTTGGTCTCACAACATTACTAAAATGGCTACCGTGAGATTTGAACATATATGTCCGACCCCTTTTATTTTTCCTTTTTCTTTCTATTAGGACTTTTTATTTTTTCACCTACTCCAAATATCTCCATGCAAGGGATACTTTATCTGCCTATATAACATTTTACATTAATACTATTTTGTGTGCTCGATATAATTTTATTTGTTTTGAAAATGAGTCTTTCTTAGGCCTTATCCCGTATGTAGAGGTTTTTAGGGTATGAGGGCCTTTGCCTTGCTGTTGACCTCATTTTCCATCCTCTTCAGCTGGAGACAGACTTTTCTCGAATCTACCATCTCTTACAACATGCAGTTGATGATATATCTGAATTGGGTGTATTGATTTCAGATCTGAAACTTTGGATCCCTCAAGACCATCTCGTGACCTTTAGTTTGACTCGCAAGGAAGGAAACATGGCTGCCCACCAGCTCACACGCTTGGTGCTGGAGCATAATCGAGAATTAGTTTGGCCGGAAGATTGGCGAAGTGAGGTTTCAAATGTGGTTGGAGATGAATGTTCTGTTATTACGTGATTTATTTGTATCTTCGTTTACTTTAATCTAAAAAAAAAAACATCTGTTGCCAATCTGAGAAAGTGGAAAAAATATCTGTTACCATCCCAAATGTCGATGGTTTAATTTCCCACCCCGTAATTGTTGAACAAAAAAAAAATTAAAAGCTATTAATTTTCAATTAATTTATATTAAATGTATAATAAATCGTGTTCAAATTTTTATTACTTACTTTCCATATAATAAAAAAAATATTTGCTAACAAATCATGGGTCAATCAAAACATAACTCACTAGATAATACACTTATTATTATCTCATGATTCAATCCCTGCTCCAAAATCGTTGAATTAAAAAAAAAAATGGAAATCATGGCACAAATGCGTGCAAAACTATGTATGGAGAGATAAATTTAACGAAGAAAAGAAGAAAGACCGTGGAAAACAATATTTATTCTAAAAACCACATCTTTCATGAAAATGCACTAAAAACATTGTTTAAAAAATAGTTATTTGAACATATTTTTATTATATTTTCCACTCTAAAATTAGTTATTTTGAAATTAAATTTTCAACAATCTAAGGTGATGTTTTCATAGCGCTTGAGGGTATGAACACAACTTTTGAATTTTCTCAATCAAAGAAGAAAAATCAGTTTGAAAACATTATAACATGGTATATTGTTTTTATTATAATATTTGTAAGCACGTGTAATCAAAAGTTCAATATTGAATATTCTCAAAAGTCGATGGCCAAGGTCTTCTAAAACAAAAGAAAAAGTGATGCTTGTATAGCTATTTCAACTGATCTAAGTGGTTTAGATTAATCTAAGTGGTTTAGATTAATCTAAGTTGTTGAACAATCTAGATTCATTCTTCAAAATTTGATGATTGGAGTGTATTAAGAAGTTTTTTAGATGCACGAGTGCATAAATCATTTTCTAGTGTACCTTCATTAGACTGTCAAAAGACAATCGAATTTGAACCATATTAATGATGTTACAACATGTAGTTGATCCTTATTCTTTTAAATTGGTCTCTTGATCTCTCATTTAATGCCAATCAACTATTTTTTCTCTTGAACCGCAAATTTACGAGTTTTTAGTCTAAGTTTCTCACATTATAAAATAAAAAAAGAAAATTATAGTTAGATAAAAAATTATTAGATTAATATGATTAGAAATAAATGATTTATTATATTTGTAATTGTTTTTTAGATGTACCTATTGGGCCTTAAGGTCCGAGTTCGACCGACTTCCCCACTATAAAGCCCGTATTGTCCATTACTGGACTCAATCTACTAAAGTACCCATGTAGGGTACGCACTGCACCACGTGGACCAATAATGCGTCACCTGTCTAGACAACCGGCTGAAAGAGAAGCAGGTAATTTCTTCTCCTCAATGCTTCTGTAGGGGTACAGAGATTGTTTCTCCGATTCTTCCCTCCTTCTCCAGTCTTTAGGGCACAAGAGCTCGTTCCGTAGAAAAGCTGCAAGCTAAGCCTGGAAGCTTCGCACTTCCTCTCGATCTTTTTTCTACTTCCATGGCCGACTCTTCCTCTTCCCCTGCAACCCTTGATTCAAATCCTCAAGTTGCCGAGCCCGAAAACCCCAATTCCCAGACAAATCAACCCCAATCTGCCGCTTCTTCTTATCCTCCACCGCAATCGTTACCATCAACATCGGTATCTGTCGGAATAAACCCTACTTTGCATTCGCCGTTAGTGTCAACGCCACAACCACCTCTTTCTCTATCATATGCCCCGCCGCCCTTATCCGGTACGGTGGCCGTTCCTCCGACGGCTCCGTCTTTTCGGCCGGTGCCTCTCTCAGCTCATCAGTTCTTGCCCATGCCCAGCACTGGCATGCTGAACCCGAGCTATCCAAACCCTGTGGTTCAGCCTCCGGGTGTTAGCTCGGTGGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGTACAGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGCGTTGAGGCCGTACGCCACCATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTGCTCCTCAAGGAGCCTTTCCTCCCCCTGGTGGGTTTTCTTTATCCCTATTATTTCTAACCCTTCAATTGCCAATGTGATTGTGTTATAATTTTAGTACGTCATTGTTCTGATTGTCACTGTGCTGTTTGCAATGGTTAAACATTATGTTTGTTGTTGTTGTCAATTACACCAGACACATTCATTTTGAGTTCGTTATCAACTGAAGTACAGTTGAATGTTGACGAAAATTTTACTTTGGTTTTCGTGTGGTCTTGACCTGAAAGTATTTTTTCTAATCGTTGACGCAAAGTAAAAGTTCCGCGTATATTATGATGCCTGGGATTGGAAAGAGTTTGCTAAAATAAGTTCGGAGTCTATTAAAAATTTTCGTGTTGGTTAGATGAAGGGTATCGATGACAGGATGTTTTCTCCTACAGCGTCTTGTCTCTTGATTGAATACGGTGAGAAAGGTTGGAAGGCTTCATATTGCTTAGAGAACTCCCATCTACAACTCCTTGTTTGGTATGCTCATTCATATTTGCCTGTTATTCTTGTTTGATTTCAGCATCATTTTTTTAAAATGGGATTCTATTACTAAGCCCAAAGAGAACTTGGTATTTATAATACAAGCAGTATTCAAGAGTCCTTCCTTTTGCCCTACTACATAATATACGGCTGCGTCATGTTTATTTACTAGAATTTTACTGGTAGTTATATTGGATACTGTCCCTGGATATTTGAATTGCCAGAAGCAGACCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGGTATCAAATTCTCTTAATTAAATTTTTGTTGACGTTTTCTTTGATTCTTTATGCTACACCATCAACATCTAACCATTGGAGATTTGAGAGTGAATTTTGAGAACATGTAAACTTGTCCCTTTTTCAATCGATTATCTGTGTGTATGAGATGCTCAAAGTGTTGTGCTTCTTAAATCTTAAAATTCTGCTATTGATGGACGGGATATTTTGAGAAGGCTGCAGTTCAAGAGTAAGGTAAGACAAATTTACATAACAGTTAAAGGAATTTGGTGCTATCATTTGAATGTTTTCATCAGGTTATCTATTCATTCAGCTGGTGATAGTTTCCATTCCTATGCTGCCATCATTTATATGCTTTGGATTTTGGTAATGGCATTCATGATTCCTCATCAATTATTCTTCTATATACTTTTAGCACCATTAGATGGTTAGCTGTGAGTAGTCTGCCAACATTTTCTGATGCATTGGCAAGATATTTTTCTTCATTTATGCAGGAGTTCCTCGTTTTCCTTCTCCATATCATGGTATGATTCGGACTCCTTTTCCTCCGCGGCCACCTGGTGCTGTTGGCATGGTTCAAGCGATGCCACGCCCTCCTATTCCAGGGATGCCTGGTGTTCGTCCCATCATCCCTCCTGTGGTTAGGCCAGCTGTTCTCCCAAGTGTTACACCTGCAGAAAAACCACAAACGACAATTTATATTGGCCGAATTGCACAATCAGTGGAAAATGATTTTATGCTGTCCCTTCTTCAGGTAGATTAATCATTCTCTATGTTGCATTTGTTCTGTTATTTTGCTTCAATTTTAGTGGGCTATAATCAATCTCCATCTGTTTCTTTTAGCTCTGTGGACCAGTGAAGAGTTGGAAACGAGCTCAAGATCCTACAGATGGAACTCCTAGAACCTTTGGATTCTGTGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTTGTGGTATGGTGGGATTTGTTACAATTTTTGTAGATATCCTGTTTGATCTTATTAATATTCAAAGCTTGATCTTTATAACTGGTTATGTTTGTATTAACATCTTCCCAATCATTATACTTTTATTTTCTAAATGTGTCATGGCATTTCAATTGTGGGTCAATAAATGTTAATGTTTATTTAAAATTTTTCTGTTTCTTAAATGTTAATCTTCTTCCATATTCTTACTTTTTAAAAAATTATTACAGAACATATTAGTATACTCTTGCTCTACCATCCAAGACTTTTATTTAAAGATTTATTTAATCTCGACATTCCTTCCCAAGAGGGGACATTACAATTAAGTGTATGTATGTTTTTTCGGTTGTTCTATCTCGTCTTTATTGTGACTTTAAGATTAAAATTTCAACCCAAGAAGAAGTGTCATGGGTTCTACTCTATATTTGGCCTAATTGTATAACGTGGTTCTCATATTTTAAAGTTATGTTAATGCTTAGATATTTTATAAGGTGGCCTAGTTTTTGAAGCCACTCTCAAGTTTTACTTTAGTCATACCTTTTTCCCTTCTAGAGGCAAATGTTAGAATCATAGATGGTCTAATTTTCTTGATTTGATATATCTTGTTGTGATCTGATGTTAAAAGCCGAAATTTTAGTCATAAACAAGGTTGACCTCTGAACCACCATGGGTTGGCCCAGTGGTCATGGAGCTAGAGAAAAAGTAAAGAGACTTGGAGGGAATGGGTTCAAACCCCATGGTGGACACCTACATAGGATTTTAAAATCCTGTGAGTTTTCTAACAACAAAATGTTGTAAGGTCAGGTATTTATCTTGTGAGATTAGTCGAAGTGCACACAAGCTGGTGTAGACACTCATAGATAATAAAAAAATAAAAAATAAATAAAAGTCAAGGTTGACCTCTTTGTTGCTCCTTTTTTTTCCTGCCAAGATTTTGTTCATTATGGGTCGATTGTTTTCATTTTGGATGACAGACATTACTTTTTTTCAACCTAGAAACCGTATGGACGTTTATTTTGTTTGGTATCATTGTAAATAAAAAGTTATACTTTTTTCTGATAGAGAATGAACAAAACAGTAATTTAATGTAGTCTGTTTTTCTTCCCTTTCTTTCTTTTGATATCACATCAAGTATCAACTACAGTGTTCTACATTCACCTTTCAACTTATTTTTTATATAAATTTATCATTATTTTAAAAATAAACAGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCAGAGAATTCAAAGAAACTGAAAGAAACAAAAGTTTCAGAGACTAAGGAAGAAGAAGCAGAGACAGCAAATGTGGCTAAAAATGAAGGTTCAAAGCCCCCTGTAGCGGATTCAAAGGAGGACCATGATTCAGGGGAAAAAGAAGATCATGACATTGCCAATTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCAAGAGGCATCAGAAAAGCTTACAAATGCACTGGAGGAGAGATTAAAGTCTAGACCTCTGCCGCCGCCTCCTGTACTGACAACAACTGATGTCTCTGGTAATTCAAATGCAGAACCATCTAGTAAATTGAAAGATGGTGAATCTGACGCTGATATTTTGAAAAGTGGTGAGTGTTTATAAGTTGGTTGTTCAAATCTTCTCTTTGTAGCATGAGAATAAGTTTGCACGGGAGATATACAATAAAGTTTACAGTTCGGTCCTTAGTTTATTGCAAACAGTTTATGTTTCTTCCTAAAATTTAAGTGTGGAAGTGCTAGGTTGCTTAATTGTCTTAACCTCCTGCAGATGCAGCTGATGATAGAAATGATGACGACACAACTAGTGACAATAAACAAACTAGCGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAAAGAGACAGGGAGCGAGATCTGAAAAGGGAGAAGGAGCGAGAAATTGAGAGATATGAAAGAGAGACAGAACGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGATTGAGGAGGCTGAGCGACAGTATGAAGAATGTCTTAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAACGTAAAAGGAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGATGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTTGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAACAGAAAGATCCACTGAAACTTCTATCTGGTCAGCTGATGAATGTCAATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACATGGTTCTGAGCTTGACTCTAGCAGTGAGAACCATATAGGTATTATCTTACATGTCAACTGTAGAAAGTCTTTTTTTCCGCATATTTATTACCTTGTGCTCTTGTATTCTATTATTTGACTGACATATCTGGTATGTGACAGGGGATGGGATTTTACAAAATGGTAGTGGTGATGAATTAAGTACGATACCATCGTCAGAAACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTAGGATCTGGAAAACGGACTGCTGTACCTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAGGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGTTGAGGAACTCCAGGCTGTGCACCCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGTTGCAGCAGCCGAGTTTGCAAAACGTATATCAAATGCTAATTCCAAAGAAGAGAAGCCTGAAAGTGAAAGGGAGCGAGGAAGGCGTTCTAGTGAAAAGTCTAGTCAGCGTGATAGAGACCGAAATGATGAGGATACCTATCGCACCAAAGATGAGAACAAGCCAATAGACAGAGATAGAGAGCGAGACCATGTTTCAGATAAAGTAAAAACACCAGATAACAAAAAGCTGTTGGATGCAAAACAGTTGATTGATATGATTCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAATTGGGCTATTTATGAAAAGGTACGGAGTCTCATTGAATTTTTTTAATTTTAACTATTTCATGGGCATTTAAATTTGAAACTGTGTGCTACATGAATAACTTGGGTGAAATATGTTTTTAGGAGATGCTCAAATGCCTCATTTTTTTGGATGAATGAACCATCTTTTCTTGTGCCCGTATGCTTGGTTATTGTGCAGGTCTTTCTGATCTAGCGAGAGGATTAATGTTTATTTTATAGTTCTTACAAGATATTTGTCCTTCAATAAACTTGTTGAAGATTAACTGAAATTTCTAGTTACCAACTCAATACTGTCTTTTTCACTTTTTCCCCCTATTTTCTTTCGATAAGAAAACTTACCCCAGGAAAATTGCTTGAAACCTACTACTTAAGAGGGAGGGAAGATAAGATATCAGCCCATAAGCAAAAGCTTTTGGTAAAAAGCACTTCTACACTGCATTTTTCATTAAAAGTTTACTCCAATCGGAGATTAATAATAATAATAAAAAAAAGCTAGTCCCCATTCTTTGCAGGATAATGTGTGTGTTGAGTTGTAATTGCAATCTCGATGCTTGTTGTGTATTAGTGCATTGCATTAGTAATACTGCAAACAAGCAAATATCTGCATCTCATTGTCTGCGAAATTAATGAAGATGCTAGTCAACCTAGATTGTAGAGAAGTCTTTTCTCGTTTCATTCACTTTACCTTGAGTTTTCCATGTCAGCACATGGCGAAAAATCTTTTTTTTAACATTTTTCTATTAAATTCCCCTTCCCAAAAACAAGGGGAAAAACGCTGCTGATTAGAACCCTGTGTAGAGTTGGCCACTGCATGTTCTGATTCCTGCTGCTCTTTGGTTCTGAATAATTAATCTTTTATCAGTTCGGATGGAGTCTTTGGAAAAAGAATGTTCTTAGGTAACTTTTTCTTGAAATATAACGCATTATTATGCTTGTTCGCAGCATGCACTACATGAGAGAATGAGACCATGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTTGTCGATTACATTGTTTCAAGTACTCAGGAACACGTGAAGGCATCTCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTTATCTTTGAAATAAAGAAGGTCGAGACTGGTCTAGCTTTCAGATCAAAAGCATGA
mRNA sequence
ATGGCCAGACCTAAATTCAAGACCGGAACTCAACGCTGGAATTCAGAATCGAGATGCAAGACTCAAGGGTTTACAAGGAACTCAAATGATTTGGAATTTGAGAAGTGGTTCCAATTAAACCTTAAGGTGGAGATGTTCACTGCCAATGTCGTGGACATGAGTTTCTCGCCATCGCTAAGCTTCTGGCATTCTTCTCTTACCAAATGTTGGCGATCGGAGTCCATTTCAAAGTGTTTCAGGGGTGGGAGGTTGTGGTGGGGGCTCGATGACTACATCAGGTGGAGGCTCCTCGTCTTTACAGCCCAACAGTTTATCCCAGTCAATATTCAGAGGTCCCTTTGTCGTTTTCTCTTGCTCCATACATATGCATCTGATGCAGCAGAAATTGAAGCTATTATTTCCTCCCTCTCAGTTTACCCTCTCTATTCTTCGCAACACTCCTTTGACAGAAACAAAGTTCCTTGGTGTATTTCTTTGGCACCGGGGACATTTCTTTCCAGTCTCCTATTCCATGCATATCGTCCGAGTTCGACCGACTTCCCCACTATAAAGCCCGTATTGTCCATTACTGGACTCAATCTACTAAAGTACCCATGTAGGGTACGCACTGCACCACGTGGACCAATAATGCGTCACCTGTCTAGACAACCGGCTGAAAGAGAAGCAGAAAAGCTGCAAGCTAAGCCTGGAAGCTTCGCACTTCCTCTCGATCTTTTTTCTACTTCCATGGCCGACTCTTCCTCTTCCCCTGCAACCCTTGATTCAAATCCTCAAGTTGCCGAGCCCGAAAACCCCAATTCCCAGACAAATCAACCCCAATCTGCCGCTTCTTCTTATCCTCCACCGCAATCGTTACCATCAACATCGGTATCTGTCGGAATAAACCCTACTTTGCATTCGCCGTTAGTGTCAACGCCACAACCACCTCTTTCTCTATCATATGCCCCGCCGCCCTTATCCGGTACGGTGGCCGTTCCTCCGACGGCTCCGTCTTTTCGGCCGGTGCCTCTCTCAGCTCATCAGTTCTTGCCCATGCCCAGCACTGGCATGCTGAACCCGAGCTATCCAAACCCTGTGGTTCAGCCTCCGGGTGTTAGCTCGGTGGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGTACAGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGCGTTGAGGCCGTACGCCACCATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTGCTCCTCAAGGAGCCTTTCCTCCCCCTGGAGTTCCTCGTTTTCCTTCTCCATATCATGGTATGATTCGGACTCCTTTTCCTCCGCGGCCACCTGGTGCTGTTGGCATGGTTCAAGCGATGCCACGCCCTCCTATTCCAGGGATGCCTGGTGTTCGTCCCATCATCCCTCCTGTGGTTAGGCCAGCTGTTCTCCCAAGTGTTACACCTGCAGAAAAACCACAAACGACAATTTATATTGGCCGAATTGCACAATCAGTGGAAAATGATTTTATGCTGTCCCTTCTTCAGCTCTGTGGACCAGTGAAGAGTTGGAAACGAGCTCAAGATCCTACAGATGGAACTCCTAGAACCTTTGGATTCTGTGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTTGTGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCAGAGAATTCAAAGAAACTGAAAGAAACAAAAGTTTCAGAGACTAAGGAAGAAGAAGCAGAGACAGCAAATGTGGCTAAAAATGAAGGTTCAAAGCCCCCTGTAGCGGATTCAAAGGAGGACCATGATTCAGGGGAAAAAGAAGATCATGACATTGCCAATTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCAAGAGGCATCAGAAAAGCTTACAAATGCACTGGAGGAGAGATTAAAGTCTAGACCTCTGCCGCCGCCTCCTGTACTGACAACAACTGATGTCTCTGGTAATTCAAATGCAGAACCATCTAGTAAATTGAAAGATGGTGAATCTGACGCTGATATTTTGAAAAGTGATGCAGCTGATGATAGAAATGATGACGACACAACTAGTGACAATAAACAAACTAGCGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAAAGAGACAGGGAGCGAGATCTGAAAAGGGAGAAGGAGCGAGAAATTGAGAGATATGAAAGAGAGACAGAACGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGATTGAGGAGGCTGAGCGACAGTATGAAGAATGTCTTAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAACGTAAAAGGAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGATGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTTGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAACAGAAAGATCCACTGAAACTTCTATCTGGTCAGCTGATGAATGTCAATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACATGGTTCTGAGCTTGACTCTAGCAGTGAGAACCATATAGGGGATGGGATTTTACAAAATGGTAGTGGTGATGAATTAAGTACGATACCATCGTCAGAAACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTAGGATCTGGAAAACGGACTGCTGTACCTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAGGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGTTGAGGAACTCCAGGCTGTGCACCCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGTTGCAGCAGCCGAGTTTGCAAAACGTATATCAAATGCTAATTCCAAAGAAGAGAAGCCTGAAAGTGAAAGGGAGCGAGGAAGGCGTTCTAGTGAAAAGTCTAGTCAGCGTGATAGAGACCGAAATGATGAGGATACCTATCGCACCAAAGATGAGAACAAGCCAATAGACAGAGATAGAGAGCGAGACCATGTTTCAGATAAAGTAAAAACACCAGATAACAAAAAGCTGTTGGATGCAAAACAGTTGATTGATATGATTCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAATTGGGCTATTTATGAAAAGCATGCACTACATGAGAGAATGAGACCATGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTTGTCGATTACATTGTTTCAAGTACTCAGGAACACGTGAAGGCATCTCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTTATCTTTGAAATAAAGAAGGTCGAGACTGGTCTAGCTTTCAGATCAAAAGCATGA
Coding sequence (CDS)
ATGGCCAGACCTAAATTCAAGACCGGAACTCAACGCTGGAATTCAGAATCGAGATGCAAGACTCAAGGGTTTACAAGGAACTCAAATGATTTGGAATTTGAGAAGTGGTTCCAATTAAACCTTAAGGTGGAGATGTTCACTGCCAATGTCGTGGACATGAGTTTCTCGCCATCGCTAAGCTTCTGGCATTCTTCTCTTACCAAATGTTGGCGATCGGAGTCCATTTCAAAGTGTTTCAGGGGTGGGAGGTTGTGGTGGGGGCTCGATGACTACATCAGGTGGAGGCTCCTCGTCTTTACAGCCCAACAGTTTATCCCAGTCAATATTCAGAGGTCCCTTTGTCGTTTTCTCTTGCTCCATACATATGCATCTGATGCAGCAGAAATTGAAGCTATTATTTCCTCCCTCTCAGTTTACCCTCTCTATTCTTCGCAACACTCCTTTGACAGAAACAAAGTTCCTTGGTGTATTTCTTTGGCACCGGGGACATTTCTTTCCAGTCTCCTATTCCATGCATATCGTCCGAGTTCGACCGACTTCCCCACTATAAAGCCCGTATTGTCCATTACTGGACTCAATCTACTAAAGTACCCATGTAGGGTACGCACTGCACCACGTGGACCAATAATGCGTCACCTGTCTAGACAACCGGCTGAAAGAGAAGCAGAAAAGCTGCAAGCTAAGCCTGGAAGCTTCGCACTTCCTCTCGATCTTTTTTCTACTTCCATGGCCGACTCTTCCTCTTCCCCTGCAACCCTTGATTCAAATCCTCAAGTTGCCGAGCCCGAAAACCCCAATTCCCAGACAAATCAACCCCAATCTGCCGCTTCTTCTTATCCTCCACCGCAATCGTTACCATCAACATCGGTATCTGTCGGAATAAACCCTACTTTGCATTCGCCGTTAGTGTCAACGCCACAACCACCTCTTTCTCTATCATATGCCCCGCCGCCCTTATCCGGTACGGTGGCCGTTCCTCCGACGGCTCCGTCTTTTCGGCCGGTGCCTCTCTCAGCTCATCAGTTCTTGCCCATGCCCAGCACTGGCATGCTGAACCCGAGCTATCCAAACCCTGTGGTTCAGCCTCCGGGTGTTAGCTCGGTGGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGTACAGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGCGTTGAGGCCGTACGCCACCATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTGCTCCTCAAGGAGCCTTTCCTCCCCCTGGAGTTCCTCGTTTTCCTTCTCCATATCATGGTATGATTCGGACTCCTTTTCCTCCGCGGCCACCTGGTGCTGTTGGCATGGTTCAAGCGATGCCACGCCCTCCTATTCCAGGGATGCCTGGTGTTCGTCCCATCATCCCTCCTGTGGTTAGGCCAGCTGTTCTCCCAAGTGTTACACCTGCAGAAAAACCACAAACGACAATTTATATTGGCCGAATTGCACAATCAGTGGAAAATGATTTTATGCTGTCCCTTCTTCAGCTCTGTGGACCAGTGAAGAGTTGGAAACGAGCTCAAGATCCTACAGATGGAACTCCTAGAACCTTTGGATTCTGTGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTTGTGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCAGAGAATTCAAAGAAACTGAAAGAAACAAAAGTTTCAGAGACTAAGGAAGAAGAAGCAGAGACAGCAAATGTGGCTAAAAATGAAGGTTCAAAGCCCCCTGTAGCGGATTCAAAGGAGGACCATGATTCAGGGGAAAAAGAAGATCATGACATTGCCAATTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCAAGAGGCATCAGAAAAGCTTACAAATGCACTGGAGGAGAGATTAAAGTCTAGACCTCTGCCGCCGCCTCCTGTACTGACAACAACTGATGTCTCTGGTAATTCAAATGCAGAACCATCTAGTAAATTGAAAGATGGTGAATCTGACGCTGATATTTTGAAAAGTGATGCAGCTGATGATAGAAATGATGACGACACAACTAGTGACAATAAACAAACTAGCGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAAAGAGACAGGGAGCGAGATCTGAAAAGGGAGAAGGAGCGAGAAATTGAGAGATATGAAAGAGAGACAGAACGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGATTGAGGAGGCTGAGCGACAGTATGAAGAATGTCTTAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAACGTAAAAGGAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGATGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTTGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAACAGAAAGATCCACTGAAACTTCTATCTGGTCAGCTGATGAATGTCAATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACATGGTTCTGAGCTTGACTCTAGCAGTGAGAACCATATAGGGGATGGGATTTTACAAAATGGTAGTGGTGATGAATTAAGTACGATACCATCGTCAGAAACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTAGGATCTGGAAAACGGACTGCTGTACCTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAGGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGTTGAGGAACTCCAGGCTGTGCACCCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGTTGCAGCAGCCGAGTTTGCAAAACGTATATCAAATGCTAATTCCAAAGAAGAGAAGCCTGAAAGTGAAAGGGAGCGAGGAAGGCGTTCTAGTGAAAAGTCTAGTCAGCGTGATAGAGACCGAAATGATGAGGATACCTATCGCACCAAAGATGAGAACAAGCCAATAGACAGAGATAGAGAGCGAGACCATGTTTCAGATAAAGTAAAAACACCAGATAACAAAAAGCTGTTGGATGCAAAACAGTTGATTGATATGATTCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAATTGGGCTATTTATGAAAAGCATGCACTACATGAGAGAATGAGACCATGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTTGTCGATTACATTGTTTCAAGTACTCAGGAACACGTGAAGGCATCTCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTTATCTTTGAAATAAAGAAGGTCGAGACTGGTCTAGCTTTCAGATCAAAAGCATGA
Protein sequence
MARPKFKTGTQRWNSESRCKTQGFTRNSNDLEFEKWFQLNLKVEMFTANVVDMSFSPSLSFWHSSLTKCWRSESISKCFRGGRLWWGLDDYIRWRLLVFTAQQFIPVNIQRSLCRFLLLHTYASDAAEIEAIISSLSVYPLYSSQHSFDRNKVPWCISLAPGTFLSSLLFHAYRPSSTDFPTIKPVLSITGLNLLKYPCRVRTAPRGPIMRHLSRQPAEREAEKLQAKPGSFALPLDLFSTSMADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPLVSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQPPGVSSVAAPAPGMASGGTGAVPVPVPQPMMYQVPPGQVPNPALRPYATMPNGFAAVPTAAPQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSETKEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTNALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSDNKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMNVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGGLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKPIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRSKA
Homology
BLAST of Sgr029144.1 vs. NCBI nr
Match:
XP_022151264.1 (RNA-binding protein 25 isoform X1 [Momordica charantia])
HSP 1 Score: 1603.2 bits (4150), Expect = 0.0e+00
Identity = 897/973 (92.19%), Postives = 923/973 (94.86%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQVA+PENPNSQTNQP+SAA SYPPPQSLP TS+S+GINPTLHS L
Sbjct: 1 MADSSSSPATLDSNPQVADPENPNSQTNQPESAAPSYPPPQSLPPTSISLGINPTLHSSL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VSTPQPP SLSYAPPPLSGTVAVPPTAPSFRPVPL AHQF PMP+TGMLNPSYPNP VQP
Sbjct: 61 VSTPQPPPSLSYAPPPLSGTVAVPPTAPSFRPVPLPAHQFSPMPNTGMLNPSYPNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMYQVPPGQVPNPALRPYATMPNGFAAVPTAA 422
PGV SVAAPAPGM SGGTGAVPVP P M YQ+PPGQVPNPALRPY TMPNGFAA+PTA
Sbjct: 121 PGVGSVAAPAPGMPSGGTGAVPVPQPM-MAYQIPPGQVPNPALRPYGTMPNGFAAMPTAG 180
Query: 423 PQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVRP 482
PQGAFPPPGVPR+PSPY MIRTPFPPRPPGA+GMV MPRPPIPG+PGVRPIIPPVVRP
Sbjct: 181 PQGAFPPPGVPRYPSPYPAMIRTPFPPRPPGALGMVPGMPRPPIPGIPGVRPIIPPVVRP 240
Query: 483 AVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC 542
+VLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC
Sbjct: 241 SVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC 300
Query: 543 EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSETK 602
EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET+VSETK
Sbjct: 301 EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSETK 360
Query: 603 EEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTNA 662
EEEA+T VAKNE SKPPV DSKEDHDSGEKEDHDIANSAVLSDEDRDAD+EASEKLTNA
Sbjct: 361 EEEADTTKVAKNETSKPPVEDSKEDHDSGEKEDHDIANSAVLSDEDRDADREASEKLTNA 420
Query: 663 LEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSDN 722
LEERLKSRPLPPPP LT DVSGNS+AEPS+KLKD ESDADILKSDAADDRNDDDTTSDN
Sbjct: 421 LEERLKSRPLPPPPPLTAADVSGNSSAEPSAKLKDSESDADILKSDAADDRNDDDTTSDN 480
Query: 723 KQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR 782
KQTSEH+KPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR
Sbjct: 481 KQTSEHEKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR 540
Query: 783 RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK 842
RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK
Sbjct: 541 RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK 600
Query: 843 WRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMNV 902
WRRGALEEKRKKRSREKEDD VDR KEEEEI EAKRK EEEQLQKQKD LKLLS Q MNV
Sbjct: 601 WRRGALEEKRKKRSREKEDDLVDRHKEEEEIVEAKRKTEEEQLQKQKDTLKLLSDQTMNV 660
Query: 903 NEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGGL 962
NEKTVLAEESAN+I VMASE SEL+SS ENHIGDGILQNGSGDE +T+ SETRQSGGL
Sbjct: 661 NEKTVLAEESANDI-VMASERDSELNSSCENHIGDGILQNGSGDESNTVLLSETRQSGGL 720
Query: 963 PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGAL 1022
PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQK+KKMRPLVPIDYS EELQAV PASTGAL
Sbjct: 721 PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKDKKMRPLVPIDYSAEELQAVQPASTGAL 780
Query: 1023 PPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKPI 1082
PPNLVAAAEFAKRISN N+KEEKP+SERERGRRS EKSSQRDRDRNDED YRTK+ENK I
Sbjct: 781 PPNLVAAAEFAKRISNVNAKEEKPDSERERGRRSGEKSSQRDRDRNDEDAYRTKEENKAI 840
Query: 1083 DRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW 1142
DRDRERDHV DK KTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW
Sbjct: 841 DRDRERDHVLDKAKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW 900
Query: 1143 ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEI 1202
ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQ+ILDEEAEMFVLKMWRMLIFEI
Sbjct: 901 ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQTILDEEAEMFVLKMWRMLIFEI 960
Query: 1203 KKVETGLAFRSKA 1216
KKVETGLA RSKA
Sbjct: 961 KKVETGLASRSKA 971
BLAST of Sgr029144.1 vs. NCBI nr
Match:
XP_038893392.1 (RNA-binding protein 25 isoform X1 [Benincasa hispida])
HSP 1 Score: 1561.2 bits (4041), Expect = 0.0e+00
Identity = 882/974 (90.55%), Postives = 916/974 (94.05%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQ AEPENPNSQ N+P+SAASS+PPPQSLP TS+S+GINPTLH PL
Sbjct: 1 MADSSSSPATLDSNPQAAEPENPNSQANKPESAASSFPPPQSLPPTSLSIGINPTLHPPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VSTPQP SLSYAP PLSGTVAVPPTAPSFRPVPL AH F PMP +GMLNPSY NP VQP
Sbjct: 61 VSTPQPHPSLSYAPSPLSGTVAVPPTAPSFRPVPLPAHHFSPMPGSGMLNPSYSNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQP-MMYQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSVAAPAPGMASGGT AVPVPVPQP M YQVPPGQVPNP +RPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMASGGTVAVPVPVPQPRMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAFP PGVPRFPSPY MIRTPFPPRPPGA+GMV AMPRPPIPG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFPLPGVPRFPSPYPAMIRTPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PAVLPSVTPAEKPQTTIYIGRIAQSV+NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET++SET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQISET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+T NVAKNE SKP DSKED+DSGEK D DIA SAVLSDEDRDAD+EA+EKLTN
Sbjct: 361 KEEEADTTNVAKNETSKPSAEDSKEDNDSGEK-DLDIACSAVLSDEDRDADREATEKLTN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTT DVSGNS+AEPS+KLKDGE+D + LK DAADDRND+DTTSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEADGNTLKPDAADDRNDEDTTSD 480
Query: 723 NKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQ 782
+KQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKEREQ
Sbjct: 481 HKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 540
Query: 783 RRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 842
RRK EEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR
Sbjct: 541 RRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 600
Query: 843 KWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMN 902
KWRRGALEEKRKKRSREKEDDS DRQKEEEEIAEAKRKAEEEQLQKQKDPLKLL GQ M+
Sbjct: 601 KWRRGALEEKRKKRSREKEDDSFDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLPGQTMS 660
Query: 903 VNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGG 962
V EKTVLAEESANE+KVMASE SE DSS +NHIGDGILQNGSGDEL+TIP SETRQSGG
Sbjct: 661 VIEKTVLAEESANEVKVMASERESEPDSSCDNHIGDGILQNGSGDELNTIP-SETRQSGG 720
Query: 963 LPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGA 1022
LPAKRLGFGLVGSGKRTAV SVFHEEEDDEAQKEKKMRPLVPIDYS EELQAV PASTG+
Sbjct: 721 LPAKRLGFGLVGSGKRTAVRSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGS 780
Query: 1023 LPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKP 1082
LPPNL AAAEFAKR+S NSKEEKP+ ERERGRRSSEKS RDRNDEDTYR+KDENK
Sbjct: 781 LPPNLAAAAEFAKRLSTVNSKEEKPDGERERGRRSSEKSGH--RDRNDEDTYRSKDENKT 840
Query: 1083 IDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 1142
DRDRERDHV DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP
Sbjct: 841 TDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 900
Query: 1143 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 1202
WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE
Sbjct: 901 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 960
Query: 1203 IKKVETGLAFRSKA 1216
IKKVETGLAFR+KA
Sbjct: 961 IKKVETGLAFRTKA 970
BLAST of Sgr029144.1 vs. NCBI nr
Match:
KAG6573745.1 (RNA-binding protein 25, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1551.6 bits (4016), Expect = 0.0e+00
Identity = 881/995 (88.54%), Postives = 916/995 (92.06%), Query Frame = 0
Query: 223 EKLQAKPGSFALPLDLFSTSMADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPP 282
+ L+ GS LP DLFS+SMADSSS PATLDSNPQ AEPENPN Q +P+SAASS+PP
Sbjct: 157 DNLKDWSGSLRLPPDLFSSSMADSSSPPATLDSNPQAAEPENPNPQAKKPESAASSFPPT 216
Query: 283 QSLPSTSVSVGINPTLHSPLVSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQF 342
QSLP +SVGINPTLHSPLVSTPQPP SL Y PPP GTVAVPPTAPSFRPVPL HQF
Sbjct: 217 QSLPPAPISVGINPTLHSPLVSTPQPPPSLPYGPPP--GTVAVPPTAPSFRPVPLGVHQF 276
Query: 343 LPMPSTGMLNPSYPNPVVQPPGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVP 402
PMP TGMLNPSYPNP VQPPGVSSV APAPGMASG TGAVPVP PQ MM YQVPPGQVP
Sbjct: 277 SPMPGTGMLNPSYPNPGVQPPGVSSVPAPAPGMASGVTGAVPVPAPQQMMAYQVPPGQVP 336
Query: 403 NPALRPYATMPNGFAAVPTAAPQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAM 462
NPA+RPYATMPNGFAA A PQGAF PPGVPRF SP+ GMIRTPFPPRPPGA+GM+ M
Sbjct: 337 NPAMRPYATMPNGFAA---ATPQGAFLPPGVPRFASPFPGMIRTPFPPRPPGAMGMMPGM 396
Query: 463 PRPPIPGMPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGP 522
PRPP+PG+PGVRPIIPPVVRPA+LPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGP
Sbjct: 397 PRPPVPGIPGVRPIIPPVVRPAILPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGP 456
Query: 523 VKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKR 582
VKSWKRAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKR
Sbjct: 457 VKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKR 516
Query: 583 YVEKKAENSKKLKETKVSETKEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANS 642
YVEKKAENSKKLKET+VSETKEEEA+ ANVAKNE SKPP DSKED DSGEKEDHDIA S
Sbjct: 517 YVEKKAENSKKLKETQVSETKEEEADAANVAKNETSKPPAEDSKEDRDSGEKEDHDIACS 576
Query: 643 AVLSDEDRDADQEASEKLTNALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESD 702
AVLSDEDR+AD+EASEKLTNALEERLKSRPLPPPP+LTT DVSGNS+AEPS+KLKDGE D
Sbjct: 577 AVLSDEDREADREASEKLTNALEERLKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEYD 636
Query: 703 ADILKSDAADDRNDDDTTSDNKQTSE-HDKPETSSPDRSRRYDRRSRERDRERDLKREKE 762
DILKSDAADDRNDDD+TSDNKQTSE HDKPETSSPDRSRRYDRRSRERDRERDLKR+KE
Sbjct: 637 VDILKSDAADDRNDDDSTSDNKQTSEQHDKPETSSPDRSRRYDRRSRERDRERDLKRDKE 696
Query: 763 REIERYERETERERARKEREQRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEK 822
REIERYERETERERARKEREQRRKIEE ERQYEECLKEWEYREREREKQRQYEKEREKEK
Sbjct: 697 REIERYERETERERARKEREQRRKIEEIERQYEECLKEWEYREREREKQRQYEKEREKEK 756
Query: 823 ERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKA 882
ERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQ+EEEEIAEAKRKA
Sbjct: 757 ERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQREEEEIAEAKRKA 816
Query: 883 EEEQLQKQKDPLKLLSGQLMNVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGIL 942
EEEQLQK +DP KLL Q+MN+NEK VL EE ANEIK + SE SELDS ENHIGDG L
Sbjct: 817 EEEQLQKLRDPPKLLPVQMMNINEKIVLPEEPANEIKFLTSERDSELDSGRENHIGDGFL 876
Query: 943 QNGSGDELSTIPSSETRQSGGLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRP 1002
QNGSGDEL+ IP SETRQS GLPAKRLGFG+VGSGKRT VPSVFH EEDDEAQKEKKMRP
Sbjct: 877 QNGSGDELNIIP-SETRQSEGLPAKRLGFGIVGSGKRTTVPSVFH-EEDDEAQKEKKMRP 936
Query: 1003 LVPIDYSVEELQAVHPASTGALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKS 1062
LVPIDYS EELQAV P+STGALPPNL AAAEFAKRISN NSKEEKP+SERERGRR SE+S
Sbjct: 937 LVPIDYSAEELQAVQPSSTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSERS 996
Query: 1063 SQRDRDRNDEDTYRTKDENKPIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEEL 1122
SQRDRDRNDEDTYR+KDENK DRDRERD V DKVKTPDNKKLLDAKQLIDMIPKTKEEL
Sbjct: 997 SQRDRDRNDEDTYRSKDENKTTDRDRERDRVLDKVKTPDNKKLLDAKQLIDMIPKTKEEL 1056
Query: 1123 FSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQ 1182
FSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQ
Sbjct: 1057 FSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQ 1116
Query: 1183 SILDEEAEMFVLKMWRMLIFEIKKVETGLAFRSKA 1216
SILDEEAEMFVLKMWRMLIFEIKKVETGLAFRSKA
Sbjct: 1117 SILDEEAEMFVLKMWRMLIFEIKKVETGLAFRSKA 1144
BLAST of Sgr029144.1 vs. NCBI nr
Match:
XP_008446214.1 (PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo] >KAA0034320.1 RNA-binding protein 25 isoform X1 [Cucumis melo var. makuwa] >TYK15599.1 RNA-binding protein 25 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 877/974 (90.04%), Postives = 908/974 (93.22%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQ AEPENPNSQ +P+SAASS+PPPQSLP TS+SVGINPTLH PL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VST QPP LSYAP PLSGT AVPPTAPSFRPVPLSAH F PMP TGMLNPSY NP VQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSVAAPAPGM SGGTGAVPVPVPQPMM YQVPPGQVPNP +RPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAFP PGVPRFPSPY MIR PFPPRPPGA+GMV AMPRPPIPG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFPLPGVPRFPSPYPAMIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PAVLPSVTPAEKPQTTIYIGRIAQSV+NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKKAENSKKLKET++SET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+TANVAK E SKP DSKEDHDSGEK D DIA SAVLSDEDRDAD+EA EK+TN
Sbjct: 361 KEEEADTANVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTTTDVS NS+ EPS+KLKDGE+D D LK DAADDRND+DTTSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSD 480
Query: 723 NKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQ 782
+KQ SEHDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKEREQ
Sbjct: 481 HKQASEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 540
Query: 783 RRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 842
RRK EEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR
Sbjct: 541 RRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 600
Query: 843 KWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMN 902
KWRRGALEEKRKKRSREKEDDS DR+KEEEEIAEAKRKAEEEQLQK +DP KLL GQ +
Sbjct: 601 KWRRGALEEKRKKRSREKEDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTS 660
Query: 903 VNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGG 962
+NEKTV+AEES NEIKVMASE SELDSS +NHIGDGI QNGSGDEL+TIP SETRQSGG
Sbjct: 661 INEKTVIAEESTNEIKVMASERESELDSSCDNHIGDGISQNGSGDELNTIP-SETRQSGG 720
Query: 963 LPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGA 1022
LP KRLGFGLVGSGKRTAVPSVFHEEEDDEA KEKKMRPLVPIDYS EELQAV PASTGA
Sbjct: 721 LPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGA 780
Query: 1023 LPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKP 1082
LPPNL AAAEFAKRISNANSKEEKP+SERERGRR SEKS RDRNDEDTYR+KDENK
Sbjct: 781 LPPNLAAAAEFAKRISNANSKEEKPDSERERGRRPSEKSGH--RDRNDEDTYRSKDENKA 840
Query: 1083 IDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 1142
DRDRERDHV DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP
Sbjct: 841 TDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 900
Query: 1143 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 1202
WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE
Sbjct: 901 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 960
Query: 1203 IKKVETGLAFRSKA 1216
IKKVETGLAFR+KA
Sbjct: 961 IKKVETGLAFRTKA 968
BLAST of Sgr029144.1 vs. NCBI nr
Match:
KAG7012819.1 (RNA-binding protein 25 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 871/975 (89.33%), Postives = 903/975 (92.62%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSS PATLDSNPQ AEPENPN Q +P+SAASS+PP QSLP +SVGINPTLHSPL
Sbjct: 1 MADSSSPPATLDSNPQAAEPENPNPQAKKPESAASSFPPTQSLPPAPISVGINPTLHSPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VSTPQPP SL Y PPP GTVAVPPTAPSFRPVPL HQF PMP TGMLNPSYPNP VQP
Sbjct: 61 VSTPQPPPSLPYGPPP--GTVAVPPTAPSFRPVPLGVHQFSPMPGTGMLNPSYPNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSV APAPGMASG TGAVPVP PQ MM YQVPPGQVPNPA+RPYATMPNGFAA A
Sbjct: 121 PGVSSVPAPAPGMASGVTGAVPVPAPQQMMAYQVPPGQVPNPAMRPYATMPNGFAA---A 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAF PPGVPRF SP+ GMIRTPFPPRPPGA+GM+ MPRPP+PG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFLPPGVPRFASPFPGMIRTPFPPRPPGAMGMMPGMPRPPVPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PA+LPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAILPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET+VSET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+ ANVAKNE SKPP DSKED DSGEKEDHDIA SAVLSDEDR+AD+EASEKLTN
Sbjct: 361 KEEEADAANVAKNETSKPPAEDSKEDRDSGEKEDHDIACSAVLSDEDREADREASEKLTN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTT DVSGNS+AEPS+KLKDGE D DILKSDAADDRNDDD+TSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEYDVDILKSDAADDRNDDDSTSD 480
Query: 723 NKQTSE-HDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKERE 782
NKQTSE HDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKERE
Sbjct: 481 NKQTSEQHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKERE 540
Query: 783 QRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 842
QRRKIEE ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR
Sbjct: 541 QRRKIEEIERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 600
Query: 843 RKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLM 902
RKWRRGALEEKRKKRSREKEDDSVDRQ+EEEEIAEAKRKAEEEQLQK +DP KLL Q+M
Sbjct: 601 RKWRRGALEEKRKKRSREKEDDSVDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPVQMM 660
Query: 903 NVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSG 962
N+NEK VL EE ANEIK + SE SELDS ENHIGDG LQNGSGDEL+ IP SETRQS
Sbjct: 661 NINEKIVLPEEPANEIKFLTSERDSELDSGRENHIGDGFLQNGSGDELNIIP-SETRQSE 720
Query: 963 GLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTG 1022
GLPAKRLGFG+VGSGKRT VPSVFH EEDDEAQKEKKMRPLVPIDYS EELQAV P+STG
Sbjct: 721 GLPAKRLGFGIVGSGKRTTVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPSSTG 780
Query: 1023 ALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENK 1082
ALPPNL AAAEFAKRISN NSKEEKP+SERERGRR SE+SSQRDRDRNDEDTYR+KDENK
Sbjct: 781 ALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSERSSQRDRDRNDEDTYRSKDENK 840
Query: 1083 PIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR 1142
DRDRERD V DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR
Sbjct: 841 TTDRDRERDRVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR 900
Query: 1143 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 1202
PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF
Sbjct: 901 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 960
Query: 1203 EIKKVETGLAFRSKA 1216
EIKKVETGLAFRSKA
Sbjct: 961 EIKKVETGLAFRSKA 968
BLAST of Sgr029144.1 vs. ExPASy Swiss-Prot
Match:
B2RY56 (RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2)
HSP 1 Score: 128.6 bits (322), Expect = 4.7e-28
Identity = 237/900 (26.33%), Postives = 379/900 (42.11%), Query Frame = 0
Query: 412 PNGFAAVPTAAPQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPG 471
P G A+P PPP P FP PP PPG P IP
Sbjct: 11 PMGIPALPP-----GIPPPQFPGFP-----------PPVPPGT---------PMIPVPMS 70
Query: 472 VRPIIPPVVRPAVL------------PSVTPAEK-----PQTTIYIGRIAQSVENDFMLS 531
+ P V+ P V P + E P TT+++G I++ + +
Sbjct: 71 IMAPAPTVLVPTVSMVGKHLGARKDHPGLKLKENDENCGPTTTVFVGNISEKASDMLIRQ 130
Query: 532 LLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQA 591
LL CG V SWKR Q G + FGFCE++ E LRALRLL L I ++L++K
Sbjct: 131 LLAKCGLVLSWKRVQG-ASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAK 190
Query: 592 TRDYLKRYVEKKAENSKKLKETKVSETKE----------------------EEAETANVA 651
T+ L + KK N ET ++ +E E + N
Sbjct: 191 TKAQLDEWKAKKKANGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAP 250
Query: 652 KNEGSKPPVADSKEDHD-------------------------SGEKEDHDIANSAVLS-- 711
E P KE + E++ D+ + +
Sbjct: 251 SQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 310
Query: 712 ------DEDRDADQEASEKLTNALEERLKSRPLPPPPVLTTTDVSGNSNAE-PSSKLKDG 771
+E++ ++ +++ ER + R + E + ++
Sbjct: 311 DTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERER 370
Query: 772 ESDADILKSDAADDRNDDDTTSDNKQTSEHDKPETSSPDRSRRYDR-RSRERDRERDLKR 831
E D D ++ D + D D +++S+ +K + S ++SR +R R RER+RER+ +R
Sbjct: 371 ERDRDRDRTKERDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER 430
Query: 832 EKEREIERYERETERERARKEREQR--------------RKIEEAERQYEECLKEWEYRE 891
E+ERE ER ERE ERER + ++ R RK+ E E Y+E LK WE RE
Sbjct: 431 ERERERER-EREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRE 490
Query: 892 R------EREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSR 951
R E+E +R+ E+ RE KE KR KE L D DD+ DD + +R AL+++ + R +
Sbjct: 491 RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDP-KYYRGSALQKRLRDREK 550
Query: 952 EKEDDSVDRQKEEEEIAEAKRKAEEE-------QLQKQKDPLKLLSGQLMNVNEKTVLAE 1011
E E D DR++E+EE+ E +++ E +LQ+ + + + ++ E
Sbjct: 551 EMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEE 610
Query: 1012 ESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGGLPAKRLGFG 1071
E E + E E + + L+ +S+ PS + P
Sbjct: 611 EEKQEKEEKREEPVEEEEEPEQKPCLKPTLR-----PISSAPSVSSASGNATPNT----- 670
Query: 1072 LVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGALPPNLVAAA 1131
G + + E + Q+ ++ RP + + + AS PN V
Sbjct: 671 ---PGDESPCGIIIPHENSPDQQQPEEHRPKIGLSLKL-------GASNSPGQPNSVKRK 730
Query: 1132 EF-AKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKPIDRDRERD 1191
+ + N E+ + R+R D ++D TK ++ + +R
Sbjct: 731 KLPVDSVFNKFEDEDSDDVPRKR--------KLVPLDYGEDDKNATKG---TVNTEEKRK 790
Query: 1192 HVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKITE 1210
H+ K LI+ IP K ELF+Y ++W+I + + R+RPWI+KKI E
Sbjct: 791 HI---------------KSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIE 836
BLAST of Sgr029144.1 vs. ExPASy Swiss-Prot
Match:
P49756 (RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3)
HSP 1 Score: 128.3 bits (321), Expect = 6.1e-28
Identity = 239/905 (26.41%), Postives = 382/905 (42.21%), Query Frame = 0
Query: 412 PNGFAAVPTAAPQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPG 471
P G A+P PPP P FP PP PPG P IP
Sbjct: 11 PMGIPALPP-----GIPPPQFPGFP-----------PPVPPGT---------PMIPVPMS 70
Query: 472 VRPIIPPVVRPAVL------------PSVTPAEK-----PQTTIYIGRIAQSVENDFMLS 531
+ P V+ P V P + E P TT+++G I++ + +
Sbjct: 71 IMAPAPTVLVPTVSMVGKHLGARKDHPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQ 130
Query: 532 LLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQA 591
LL CG V SWKR Q G + FGFCE++ E LRALRLL L I ++L++K
Sbjct: 131 LLAKCGLVLSWKRVQG-ASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAK 190
Query: 592 TRDYLKRY-VEKKAENSKKLKETKVSETKE----------------------EEAETANV 651
T+ L + +KKA N ET ++ +E E + N
Sbjct: 191 TKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNA 250
Query: 652 AKNEGSKPPVADSKEDHD-------------------------SGEKEDHDIANSAVLS- 711
E P KE + E++ D+ + +
Sbjct: 251 PSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKF 310
Query: 712 -------DEDRDADQEASEKLTNALEERLKSRPLPPPPVLTTTDVSGNSNAEPS---SKL 771
+E++ ++ +++ ER + R + E +
Sbjct: 311 RDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERE 370
Query: 772 KDGESDADILKSDAADDRNDDDTTSDNKQTSEHDKPETSSPDRSRRYDR-RSRERDRERD 831
++ + D D K D + D D +++S+ +K + S ++SR +R R RER+RER+
Sbjct: 371 RERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERE 430
Query: 832 LKREKEREIERYERETERERARKEREQR----------------RKIEEAERQYEECLKE 891
+RE+ERE ER ERE ERER R++ ++R RK+ E E Y+E LK
Sbjct: 431 RERERERERER-EREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKN 490
Query: 892 WEYRER------EREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKR 951
WE RER E+E +R+ E+ RE KE KR KE L D DD+ DD + +R AL+++
Sbjct: 491 WEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDP-KYYRGSALQKRL 550
Query: 952 KKRSREKEDDSVDRQKEEEEIAEAKRKAEEE-------QLQKQKDPLKLLSGQLMNVNEK 1011
+ R +E E D DR++E+EE+ E +++ E +LQ+ + + + +
Sbjct: 551 RDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPE 610
Query: 1012 TVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGGLPAK 1071
+ EE E + E E + + L+ +S+ PS + P
Sbjct: 611 SEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLR-----PISSAPSVSSASGNATPNT 670
Query: 1072 RLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGALPPN 1131
G + + E + Q+ ++ RP + + + AS PN
Sbjct: 671 --------PGDESPCGIIIPHENSPDQQQPEEHRPKIGLSLKL-------GASNSPGQPN 730
Query: 1132 LVAAAEF-AKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKPIDR 1191
V + + N E+ + R+R D ++D TK ++
Sbjct: 731 SVKRKKLPVDSVFNKFEDEDSDDVPRKR--------KLVPLDYGEDDKNATKG---TVNT 790
Query: 1192 DRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWIS 1210
+ +R H+ K LI+ IP K ELF+Y ++W+I + + R+RPWI+
Sbjct: 791 EEKRKHI---------------KSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWIN 841
BLAST of Sgr029144.1 vs. ExPASy TrEMBL
Match:
A0A6J1DCH4 (RNA-binding protein 25 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019228 PE=4 SV=1)
HSP 1 Score: 1603.2 bits (4150), Expect = 0.0e+00
Identity = 897/973 (92.19%), Postives = 923/973 (94.86%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQVA+PENPNSQTNQP+SAA SYPPPQSLP TS+S+GINPTLHS L
Sbjct: 1 MADSSSSPATLDSNPQVADPENPNSQTNQPESAAPSYPPPQSLPPTSISLGINPTLHSSL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VSTPQPP SLSYAPPPLSGTVAVPPTAPSFRPVPL AHQF PMP+TGMLNPSYPNP VQP
Sbjct: 61 VSTPQPPPSLSYAPPPLSGTVAVPPTAPSFRPVPLPAHQFSPMPNTGMLNPSYPNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMYQVPPGQVPNPALRPYATMPNGFAAVPTAA 422
PGV SVAAPAPGM SGGTGAVPVP P M YQ+PPGQVPNPALRPY TMPNGFAA+PTA
Sbjct: 121 PGVGSVAAPAPGMPSGGTGAVPVPQPM-MAYQIPPGQVPNPALRPYGTMPNGFAAMPTAG 180
Query: 423 PQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVRP 482
PQGAFPPPGVPR+PSPY MIRTPFPPRPPGA+GMV MPRPPIPG+PGVRPIIPPVVRP
Sbjct: 181 PQGAFPPPGVPRYPSPYPAMIRTPFPPRPPGALGMVPGMPRPPIPGIPGVRPIIPPVVRP 240
Query: 483 AVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC 542
+VLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC
Sbjct: 241 SVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFC 300
Query: 543 EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSETK 602
EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET+VSETK
Sbjct: 301 EFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSETK 360
Query: 603 EEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTNA 662
EEEA+T VAKNE SKPPV DSKEDHDSGEKEDHDIANSAVLSDEDRDAD+EASEKLTNA
Sbjct: 361 EEEADTTKVAKNETSKPPVEDSKEDHDSGEKEDHDIANSAVLSDEDRDADREASEKLTNA 420
Query: 663 LEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSDN 722
LEERLKSRPLPPPP LT DVSGNS+AEPS+KLKD ESDADILKSDAADDRNDDDTTSDN
Sbjct: 421 LEERLKSRPLPPPPPLTAADVSGNSSAEPSAKLKDSESDADILKSDAADDRNDDDTTSDN 480
Query: 723 KQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR 782
KQTSEH+KPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR
Sbjct: 481 KQTSEHEKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQR 540
Query: 783 RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK 842
RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK
Sbjct: 541 RKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRK 600
Query: 843 WRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMNV 902
WRRGALEEKRKKRSREKEDD VDR KEEEEI EAKRK EEEQLQKQKD LKLLS Q MNV
Sbjct: 601 WRRGALEEKRKKRSREKEDDLVDRHKEEEEIVEAKRKTEEEQLQKQKDTLKLLSDQTMNV 660
Query: 903 NEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGGL 962
NEKTVLAEESAN+I VMASE SEL+SS ENHIGDGILQNGSGDE +T+ SETRQSGGL
Sbjct: 661 NEKTVLAEESANDI-VMASERDSELNSSCENHIGDGILQNGSGDESNTVLLSETRQSGGL 720
Query: 963 PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGAL 1022
PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQK+KKMRPLVPIDYS EELQAV PASTGAL
Sbjct: 721 PAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKDKKMRPLVPIDYSAEELQAVQPASTGAL 780
Query: 1023 PPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKPI 1082
PPNLVAAAEFAKRISN N+KEEKP+SERERGRRS EKSSQRDRDRNDED YRTK+ENK I
Sbjct: 781 PPNLVAAAEFAKRISNVNAKEEKPDSERERGRRSGEKSSQRDRDRNDEDAYRTKEENKAI 840
Query: 1083 DRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW 1142
DRDRERDHV DK KTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW
Sbjct: 841 DRDRERDHVLDKAKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPW 900
Query: 1143 ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEI 1202
ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQ+ILDEEAEMFVLKMWRMLIFEI
Sbjct: 901 ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQTILDEEAEMFVLKMWRMLIFEI 960
Query: 1203 KKVETGLAFRSKA 1216
KKVETGLA RSKA
Sbjct: 961 KKVETGLASRSKA 971
BLAST of Sgr029144.1 vs. ExPASy TrEMBL
Match:
A0A5A7STL6 (RNA-binding protein 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00960 PE=4 SV=1)
HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 877/974 (90.04%), Postives = 908/974 (93.22%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQ AEPENPNSQ +P+SAASS+PPPQSLP TS+SVGINPTLH PL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VST QPP LSYAP PLSGT AVPPTAPSFRPVPLSAH F PMP TGMLNPSY NP VQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSVAAPAPGM SGGTGAVPVPVPQPMM YQVPPGQVPNP +RPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAFP PGVPRFPSPY MIR PFPPRPPGA+GMV AMPRPPIPG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFPLPGVPRFPSPYPAMIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PAVLPSVTPAEKPQTTIYIGRIAQSV+NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKKAENSKKLKET++SET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+TANVAK E SKP DSKEDHDSGEK D DIA SAVLSDEDRDAD+EA EK+TN
Sbjct: 361 KEEEADTANVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTTTDVS NS+ EPS+KLKDGE+D D LK DAADDRND+DTTSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSD 480
Query: 723 NKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQ 782
+KQ SEHDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKEREQ
Sbjct: 481 HKQASEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 540
Query: 783 RRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 842
RRK EEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR
Sbjct: 541 RRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 600
Query: 843 KWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMN 902
KWRRGALEEKRKKRSREKEDDS DR+KEEEEIAEAKRKAEEEQLQK +DP KLL GQ +
Sbjct: 601 KWRRGALEEKRKKRSREKEDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTS 660
Query: 903 VNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGG 962
+NEKTV+AEES NEIKVMASE SELDSS +NHIGDGI QNGSGDEL+TIP SETRQSGG
Sbjct: 661 INEKTVIAEESTNEIKVMASERESELDSSCDNHIGDGISQNGSGDELNTIP-SETRQSGG 720
Query: 963 LPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGA 1022
LP KRLGFGLVGSGKRTAVPSVFHEEEDDEA KEKKMRPLVPIDYS EELQAV PASTGA
Sbjct: 721 LPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGA 780
Query: 1023 LPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKP 1082
LPPNL AAAEFAKRISNANSKEEKP+SERERGRR SEKS RDRNDEDTYR+KDENK
Sbjct: 781 LPPNLAAAAEFAKRISNANSKEEKPDSERERGRRPSEKSGH--RDRNDEDTYRSKDENKA 840
Query: 1083 IDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 1142
DRDRERDHV DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP
Sbjct: 841 TDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 900
Query: 1143 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 1202
WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE
Sbjct: 901 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 960
Query: 1203 IKKVETGLAFRSKA 1216
IKKVETGLAFR+KA
Sbjct: 961 IKKVETGLAFRTKA 968
BLAST of Sgr029144.1 vs. ExPASy TrEMBL
Match:
A0A1S3BEI5 (RNA-binding protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489014 PE=4 SV=1)
HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 877/974 (90.04%), Postives = 908/974 (93.22%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQ AEPENPNSQ +P+SAASS+PPPQSLP TS+SVGINPTLH PL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VST QPP LSYAP PLSGT AVPPTAPSFRPVPLSAH F PMP TGMLNPSY NP VQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSVAAPAPGM SGGTGAVPVPVPQPMM YQVPPGQVPNP +RPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAFP PGVPRFPSPY MIR PFPPRPPGA+GMV AMPRPPIPG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFPLPGVPRFPSPYPAMIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PAVLPSVTPAEKPQTTIYIGRIAQSV+NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKKAENSKKLKET++SET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+TANVAK E SKP DSKEDHDSGEK D DIA SAVLSDEDRDAD+EA EK+TN
Sbjct: 361 KEEEADTANVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTTTDVS NS+ EPS+KLKDGE+D D LK DAADDRND+DTTSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSD 480
Query: 723 NKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQ 782
+KQ SEHDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKEREQ
Sbjct: 481 HKQASEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 540
Query: 783 RRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 842
RRK EEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR
Sbjct: 541 RRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 600
Query: 843 KWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLMN 902
KWRRGALEEKRKKRSREKEDDS DR+KEEEEIAEAKRKAEEEQLQK +DP KLL GQ +
Sbjct: 601 KWRRGALEEKRKKRSREKEDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTS 660
Query: 903 VNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSGG 962
+NEKTV+AEES NEIKVMASE SELDSS +NHIGDGI QNGSGDEL+TIP SETRQSGG
Sbjct: 661 INEKTVIAEESTNEIKVMASERESELDSSCDNHIGDGISQNGSGDELNTIP-SETRQSGG 720
Query: 963 LPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTGA 1022
LP KRLGFGLVGSGKRTAVPSVFHEEEDDEA KEKKMRPLVPIDYS EELQAV PASTGA
Sbjct: 721 LPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGA 780
Query: 1023 LPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENKP 1082
LPPNL AAAEFAKRISNANSKEEKP+SERERGRR SEKS RDRNDEDTYR+KDENK
Sbjct: 781 LPPNLAAAAEFAKRISNANSKEEKPDSERERGRRPSEKSGH--RDRNDEDTYRSKDENKA 840
Query: 1083 IDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 1142
DRDRERDHV DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP
Sbjct: 841 TDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRP 900
Query: 1143 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 1202
WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE
Sbjct: 901 WISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFE 960
Query: 1203 IKKVETGLAFRSKA 1216
IKKVETGLAFR+KA
Sbjct: 961 IKKVETGLAFRTKA 968
BLAST of Sgr029144.1 vs. ExPASy TrEMBL
Match:
A0A6J1HQ55 (RNA-binding protein 25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466362 PE=4 SV=1)
HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 870/975 (89.23%), Postives = 904/975 (92.72%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSSSPATLDSNPQVAEPENPN Q +P+SAA+S+PP QSLP +SVGINPTLHSPL
Sbjct: 1 MADSSSSPATLDSNPQVAEPENPNPQAKKPESAAASFPPTQSLPPAPISVGINPTLHSPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VST QPP LSY PPP GTVAVPPTAPSFRPVPL HQF PMP TGMLNPSYPNP VQP
Sbjct: 61 VSTLQPP-PLSYGPPP--GTVAVPPTAPSFRPVPLGVHQFSPMPGTGMLNPSYPNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSV APAPGMASG TGAVPVP PQ MM YQVPPGQVPNPA+RPYATMPNGFAA A
Sbjct: 121 PGVSSVPAPAPGMASGVTGAVPVPAPQQMMAYQVPPGQVPNPAMRPYATMPNGFAA---A 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAF PPGVPRF SP+HGMIRTPFPPRPPGA+GM+ MPRPP+PG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFLPPGVPRFASPFHGMIRTPFPPRPPGAMGMMPGMPRPPVPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PA+LPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF
Sbjct: 241 PAILPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET+VSET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+TANVAKNE SKPP DSKED DSGEKEDHDIA SAVLSDEDR+AD+EA EKLTN
Sbjct: 361 KEEEADTANVAKNETSKPPAEDSKEDRDSGEKEDHDIACSAVLSDEDREADREALEKLTN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LT+ DVS NS+AEPS+KLKDGE D DILKSDAADDRNDDD+TSD
Sbjct: 421 ALEERLKSRPLPPPPLLTSADVSRNSSAEPSAKLKDGEYDVDILKSDAADDRNDDDSTSD 480
Query: 723 NKQTSE-HDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKERE 782
NKQTSE HDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKERE
Sbjct: 481 NKQTSEQHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKERE 540
Query: 783 QRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 842
QRRKIEE ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR
Sbjct: 541 QRRKIEEIERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 600
Query: 843 RKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLM 902
RKWRRGALEEKRKKRSREKEDDSVDRQ+EEEEIAEAKRKAEEEQLQKQ+DP KLL GQ+M
Sbjct: 601 RKWRRGALEEKRKKRSREKEDDSVDRQREEEEIAEAKRKAEEEQLQKQRDPPKLLPGQMM 660
Query: 903 NVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSG 962
N+NEK VL EE AN+IK SE SELDS ENHIGDG LQNGSGDEL+ IP +ETRQS
Sbjct: 661 NINEKIVLPEEPANDIKFFTSECDSELDSGRENHIGDGFLQNGSGDELNIIP-AETRQSE 720
Query: 963 GLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTG 1022
GLPAKRLGFG+VGSGKRT VPSVFH EEDDEAQKEKKMRPLVPIDYS EELQAV P+STG
Sbjct: 721 GLPAKRLGFGIVGSGKRTTVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPSSTG 780
Query: 1023 ALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENK 1082
ALPPNL AAAEFAKRISN NSKEEKP+SERERGRR SE+SSQRDRDRNDEDTYR+KDENK
Sbjct: 781 ALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSERSSQRDRDRNDEDTYRSKDENK 840
Query: 1083 PIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR 1142
DRDRERD V DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINW IYEKHALHERMR
Sbjct: 841 TTDRDRERDRVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWVIYEKHALHERMR 900
Query: 1143 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 1202
PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF
Sbjct: 901 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 960
Query: 1203 EIKKVETGLAFRSKA 1216
EIKKVETGLAFRSKA
Sbjct: 961 EIKKVETGLAFRSKA 967
BLAST of Sgr029144.1 vs. ExPASy TrEMBL
Match:
A0A6J1G083 (RNA-binding protein 25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449522 PE=4 SV=1)
HSP 1 Score: 1531.5 bits (3964), Expect = 0.0e+00
Identity = 871/975 (89.33%), Postives = 902/975 (92.51%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MADSSS PATLDSNPQ AEPENPN Q +P+SAASS+PP QSLP +SVGINPTLHSPL
Sbjct: 1 MADSSSPPATLDSNPQAAEPENPNPQAKKPESAASSFPPTQSLPPAPISVGINPTLHSPL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVPPTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPVVQP 362
VSTPQPP SLSY PPP GTVAVPPTAPSFRPVPL HQF PMP TGMLNPSYPNP VQP
Sbjct: 61 VSTPQPPPSLSYGPPP--GTVAVPPTAPSFRPVPLGVHQFSPMPGTGMLNPSYPNPGVQP 120
Query: 363 PGVSSVAAPAPGMASGGTGAVPVPVPQPMM-YQVPPGQVPNPALRPYATMPNGFAAVPTA 422
PGVSSV APA GMASG TGAVPVP PQ MM YQVPPGQVPNPA+RPYATMPNGFAA A
Sbjct: 121 PGVSSVPAPASGMASGVTGAVPVPAPQQMMAYQVPPGQVPNPAMRPYATMPNGFAA---A 180
Query: 423 APQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPVVR 482
PQGAF PPGVPRF SP+ GMIRTPFPPRPPGA+GM+ MPRPPIPG+PGVRPIIPPVVR
Sbjct: 181 TPQGAFLPPGVPRFASPFPGMIRTPFPPRPPGAMGMMPGMPRPPIPGIPGVRPIIPPVVR 240
Query: 483 PAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 542
PA+LPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 241 PAILPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 300
Query: 543 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVSET 602
CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKET+VSET
Sbjct: 301 CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSET 360
Query: 603 KEEEAETANVAKNEGSKPPVADSKEDHDSGEKEDHDIANSAVLSDEDRDADQEASEKLTN 662
KEEEA+ ANVAKNE SKPP DSKED DSGEKEDHDIA SAVLSDEDR+AD+EASEKLTN
Sbjct: 361 KEEEADAANVAKNETSKPPAEDSKEDRDSGEKEDHDIACSAVLSDEDREADREASEKLTN 420
Query: 663 ALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDDTTSD 722
ALEERLKSRPLPPPP+LTT DVSGNS+AEPS+KLKDGE D DILKSDAADDRNDDD+TSD
Sbjct: 421 ALEERLKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEYDVDILKSDAADDRNDDDSTSD 480
Query: 723 NKQTSE-HDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARKERE 782
NKQTSE HDKPETSSPDRSRRYDRRSRERDRERDLKR+KEREIERYERETERERARKERE
Sbjct: 481 NKQTSEQHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKERE 540
Query: 783 QRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 842
QRRKIEE ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR
Sbjct: 541 QRRKIEEIERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSR 600
Query: 843 RKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLSGQLM 902
RKWRRGALEEKRKKRSREKEDDSVDRQ+EEEEIAEAKRKAEEEQLQK +DP KLL Q+M
Sbjct: 601 RKWRRGALEEKRKKRSREKEDDSVDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPVQMM 660
Query: 903 NVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSSETRQSG 962
N+NEK VL EE ANEIK + SE SELDS ENHIGDG LQNGSGDEL+ IP SETRQS
Sbjct: 661 NINEKIVLPEEPANEIKFLTSERDSELDSGRENHIGDGFLQNGSGDELNIIP-SETRQSE 720
Query: 963 GLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAVHPASTG 1022
LPAKRLGFG+VGSGKRT VPSVFH EEDDEAQKEKKMRPLVPIDYS EELQAV P+STG
Sbjct: 721 CLPAKRLGFGIVGSGKRTTVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPSSTG 780
Query: 1023 ALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDRNDEDTYRTKDENK 1082
ALPPNL AAAEFAKRISN NSKEEKP+SERERGRR SE+SSQRDRDRNDEDTYR+KDENK
Sbjct: 781 ALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSERSSQRDRDRNDEDTYRSKDENK 840
Query: 1083 PIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR 1142
DRDRERD V DKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR
Sbjct: 841 TTDRDRERDRVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMR 900
Query: 1143 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 1202
PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF
Sbjct: 901 PWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIF 960
Query: 1203 EIKKVETGLAFRSKA 1216
EIKKVETGLAFRSKA
Sbjct: 961 EIKKVETGLAFRSKA 968
BLAST of Sgr029144.1 vs. TAIR 10
Match:
AT1G60200.1 (splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 749.2 bits (1933), Expect = 5.2e-216
Identity = 529/984 (53.76%), Postives = 667/984 (67.78%), Query Frame = 0
Query: 243 MADSSSSPATLDSNPQVAEPENPNSQTNQPQSAASSYPPPQSLPSTSVSVGINPTLHSPL 302
MAD SSSPAT D N Q E P S N + + + PPPQ V +PL
Sbjct: 1 MADESSSPATGDPNSQKPESTTPISIPNPNPNPSLTPPPPQQHSQPPV---------APL 60
Query: 303 VSTPQPPLSLSYAPPPLSGTVAVP---PTAPSFRPVPLSAHQFLPMPSTGMLNPSYPNPV 362
V P PP YAPP + +P P P FRP QF P + N P+
Sbjct: 61 V-PPGPP----YAPPAQIPSSLLPTNLPPPPPFRP----GMQFTP-----VANFQNPSSG 120
Query: 363 VQPPGVSSVAAPAPGMASGGTGAVPVPVPQPMMYQVPPGQVPNPALRPYATMPNGFAAVP 422
V PPG +PQ YQ P P +RP+ M NG+ +
Sbjct: 121 VPPPG---------------------SMPQ---YQ------PQPGMRPFQPMANGYPGIH 180
Query: 423 TAAPQGAFPPPGVPRFPSPYHGMIRTPFPPRPPGAVGMVQAMPRPPIPGMPGVRPIIPPV 482
AP GA PP G+ R+PSPY M+R F RPPG +G VQ PRP IPGMPG+RP++PP+
Sbjct: 181 GVAPPGAMPPHGLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGLRPVMPPM 240
Query: 483 VRPAVLPSVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPTDGTPRTF 542
VRPA LP VTPAEKPQTTIYIG+IA +VENDFM+S+L+ CG VKS RA+DPT P+ F
Sbjct: 241 VRPASLPFVTPAEKPQTTIYIGKIA-TVENDFMMSILEFCGHVKSCLRAEDPTTKKPKGF 300
Query: 543 GFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETKVS 602
GF EFESAEG+LRA+RLLT+ IDGQEL++ QAT++YL +YVEKK E +KK KE++
Sbjct: 301 GFYEFESAEGILRAIRLLTQRTIDGQELLVNVNQATKEYLLKYVEKKIETAKKAKESQ-- 360
Query: 603 ETKEEEAETANVAKNEGSKPPVADSK--EDHDSGEKEDHDIANSAVLSDEDRDADQEASE 662
TKE +AE ++E K AD++ +D +S KE+ DIANSAVL+DE+R+AD+EA E
Sbjct: 361 GTKENQAEG---PESEQDKLESADNETGKDGESKIKENIDIANSAVLTDEEREADREAME 420
Query: 663 KLTNALEERLKSRPLPPPPVLTTTDVSGNSNAEPSSKLKDGESDADILKSDAADDRNDDD 722
K+ A+EERLKS PLPPPP + S E + K KDG+S+ D+ +SDAA
Sbjct: 421 KIETAIEERLKSNPLPPPP----PPPADGSGMEFAFKSKDGDSNTDVARSDAA------- 480
Query: 723 TTSDNKQTSEHDKPETSSPDRSRRYDRRSRERDRERDLKREKEREIERYERETERERARK 782
+D + + EH++P+TSSPD S+R DRRSRER EKE+E++RYERE ERER+RK
Sbjct: 481 -ANDVETSGEHNRPDTSSPDWSKRNDRRSRERG-------EKEQEMDRYEREAERERSRK 540
Query: 783 EREQRRKIEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDE-- 842
EREQRRK+E+AER Y+ L++WE RERE+EK+RQYEKE+EKEKERKRKKEI Y+E++E
Sbjct: 541 EREQRRKLEDAERAYQTRLRQWERREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEED 600
Query: 843 DDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQLQKQK-DPLKL 902
DDDSRR+W R AL+E+R+++ REKEDD DR KEEEE+AEAKR AEE+ LQ+Q+ D L++
Sbjct: 601 DDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALRI 660
Query: 903 LSGQLMNVNEKTVLAEESANEIKVMASEHGSELDSSSENHIGDGILQNGSGDELSTIPSS 962
LSGQ + +TV N+ K G +S++E+H D +NGSG+E I ++
Sbjct: 661 LSGQAA-IGSETVQTSPIENDHKATLQTVG---ESANEHHAAD-FEENGSGNESMAIDNN 720
Query: 963 ETRQSGGLPAKRLGFGLVGSGKRTAVPSVFHEEEDDEAQKEKKMRPLVPIDYSVEELQAV 1022
++ P+K+LGFGLVGSGKRT+VPSVF+EE++DEA+K KKM+PLVPIDYS EE +AV
Sbjct: 721 SGSEAHA-PSKKLGFGLVGSGKRTSVPSVFYEEDEDEARKAKKMKPLVPIDYSTEEQEAV 780
Query: 1023 HPASTGALPPNLVAAAEFAKRISNANSKEEKPESERERGRRSSEKSSQRDRDR---NDED 1082
+G PP+L AAEFAKRIS+ N KEE E+E++R RRS +K+S RDR+R D D
Sbjct: 781 AHGGSGNTPPHLALAAEFAKRISSTNPKEETIETEKQRSRRSHDKASHRDRERERERDRD 840
Query: 1083 TYRTKDENKPIDRDRERDHVSDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYE 1142
R +D + S K K D K LDAKQLID IPKTKE+LFSY+INWA+Y+
Sbjct: 841 RDRVRDRGDGHSGPTKDAKESGKAKIIDT-KFLDAKQLIDTIPKTKEDLFSYEINWAMYD 899
Query: 1143 KHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFV 1202
KH +HERMRPWISKKI EFLGEEE TLVD+IVS+TQ+HV+ASQMLELLQSILDEEAEMFV
Sbjct: 901 KHQVHERMRPWISKKIMEFLGEEEATLVDFIVSNTQQHVQASQMLELLQSILDEEAEMFV 899
Query: 1203 LKMWRMLIFEIKKVETGLAFRSKA 1216
LKMWRMLIFEIK+VE G+ +SKA
Sbjct: 961 LKMWRMLIFEIKRVEAGVPVKSKA 899
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022151264.1 | 0.0e+00 | 92.19 | RNA-binding protein 25 isoform X1 [Momordica charantia] | [more] |
XP_038893392.1 | 0.0e+00 | 90.55 | RNA-binding protein 25 isoform X1 [Benincasa hispida] | [more] |
KAG6573745.1 | 0.0e+00 | 88.54 | RNA-binding protein 25, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_008446214.1 | 0.0e+00 | 90.04 | PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo] >KAA0034320.1 RNA-bi... | [more] |
KAG7012819.1 | 0.0e+00 | 89.33 | RNA-binding protein 25 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
B2RY56 | 4.7e-28 | 26.33 | RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 | [more] |
P49756 | 6.1e-28 | 26.41 | RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DCH4 | 0.0e+00 | 92.19 | RNA-binding protein 25 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019228... | [more] |
A0A5A7STL6 | 0.0e+00 | 90.04 | RNA-binding protein 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S3BEI5 | 0.0e+00 | 90.04 | RNA-binding protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489014 PE=4 S... | [more] |
A0A6J1HQ55 | 0.0e+00 | 89.23 | RNA-binding protein 25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114663... | [more] |
A0A6J1G083 | 0.0e+00 | 89.33 | RNA-binding protein 25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144... | [more] |
Match Name | E-value | Identity | Description | |
AT1G60200.1 | 5.2e-216 | 53.76 | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-cont... | [more] |