Homology
BLAST of Sgr029061.1 vs. NCBI nr
Match:
XP_022151060.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 522/572 (91.26%), Postives = 546/572 (95.45%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPD 289
LF + +S ELKQIQAFTIKTNL NDISVLTK+INFCTLNP+TSSMDHAHHLFDQIPD
Sbjct: 32 LFLLSKCTSLRELKQIQAFTIKTNLQNDISVLTKIINFCTLNPSTSSMDHAHHLFDQIPD 91
Query: 290 KDIVLFNLLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQL 349
KDIVLFN++ARGYARSNTPYLAFSLF+Q+LCSGLLPDDYTFSSLLKACASSKA EGRQL
Sbjct: 92 KDIVLFNIMARGYARSNTPYLAFSLFSQVLCSGLLPDDYTFSSLLKACASSKAFSEGRQL 151
Query: 350 HCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQP 409
HCFAIKLGLNHNIY+CP+LIN+YAECNDMNAAR VFD M+ PCIVSYN+IITG+ARSSQP
Sbjct: 152 HCFAIKLGLNHNIYICPSLINLYAECNDMNAARGVFDEMEAPCIVSYNAIITGHARSSQP 211
Query: 410 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTAL 469
NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTAL
Sbjct: 212 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTAL 271
Query: 470 IDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDE 529
IDMYAKCGSL DAISIFE M VRDTQAWSAMIVAYATHGDGLKAIS+F+EMKRAGVRPDE
Sbjct: 272 IDMYAKCGSLVDAISIFEDMRVRDTQAWSAMIVAYATHGDGLKAISMFEEMKRAGVRPDE 331
Query: 530 ITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFID 589
ITFLGLLYACSHAGLVEEG GYF SMSK +GI PGIKHYGCMVDLLGRTG LDEAYKFID
Sbjct: 332 ITFLGLLYACSHAGLVEEGRGYFNSMSKYYGIAPGIKHYGCMVDLLGRTGHLDEAYKFID 391
Query: 590 GLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWED 649
G EIKPTPILWRTLLSACSN GNVDLAK+VIERIFELDDSHGGDYVILSNLCARVGRWED
Sbjct: 392 GSEIKPTPILWRTLLSACSNRGNVDLAKRVIERIFELDDSHGGDYVILSNLCARVGRWED 451
Query: 650 VNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGY 709
VNH+RKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELIKEIKLVGY
Sbjct: 452 VNHIRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLVGY 511
Query: 710 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAK 769
VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLN+PPGT IRVVKNLRICGDCHTAAK
Sbjct: 512 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNSPPGTPIRVVKNLRICGDCHTAAK 571
Query: 770 LISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
LIS IFGRQI+IRDVQRFHRF+DGKCSCCDFW
Sbjct: 572 LISFIFGRQIVIRDVQRFHRFEDGKCSCCDFW 603
BLAST of Sgr029061.1 vs. NCBI nr
Match:
XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 517/565 (91.50%), Postives = 541/565 (95.75%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
SS ELKQIQA+TIKTNLHNDISVLTKLINFCT NPT SSMDHAHHLFD++ DKDIVLFN
Sbjct: 34 SSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFN 93
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
++ARGYARSN+PYL FSLFAQ+LCSGLLPDDYTFSSLLKACA SKAL+EGRQLHCFAIKL
Sbjct: 94 IMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKL 153
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
GL HNIY+CPTLINMYA CNDMNAAR VFDGM+ PCIVSYN+IITGYARSSQPNEALSLF
Sbjct: 154 GLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLF 213
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTALIDMYAKC
Sbjct: 214 RELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKC 273
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GS+ DAISIFEGM VRDTQAWSAMIVA+ATHGDGLKAIS+F+EMK+AGVRPDEITFLGLL
Sbjct: 274 GSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLL 333
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
YACSHAGLVEEG GYFYSM KNHGI PGIKHYGCMVDLLGRTGRLDEAYKFID L IKPT
Sbjct: 334 YACSHAGLVEEGRGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPT 393
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
PILWRTLLSACSNHGNVDLAK+VIERIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKL
Sbjct: 394 PILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKL 453
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELIKEIKL GYVPDTSLV
Sbjct: 454 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLAGYVPDTSLV 513
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
YHADMEEE KELVLRYHSEKLA+AFGLLNTPPGTTIRVVKNLRICGDCH AAKLISLIFG
Sbjct: 514 YHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFG 573
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
RQI+IRDVQRFHRF+DG+CSCCDFW
Sbjct: 574 RQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Sgr029061.1 vs. NCBI nr
Match:
KAG7013140.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1074.7 bits (2778), Expect = 6.2e-310
Identity = 522/601 (86.86%), Postives = 553/601 (92.01%), Query Frame = 0
Query: 201 CVDTSGSVFIKCPVLPKGRCKQLQSAAYRLFASAAVSSAMELKQIQAFTIKTNLHNDISV 260
C+ TS K PK K+ + + L + +S ELKQIQA+TIKTNLHNDISV
Sbjct: 5 CIPTSQFALTK----PK---KEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISV 64
Query: 261 LTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGYARSNTPYLAFSLFAQILC 320
LTKLINFCT NPTTSSMDHAHHLFD++ DKDIVLFN++ARGYARSN+PYL FSLFAQ+LC
Sbjct: 65 LTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLC 124
Query: 321 SGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNIYLCPTLINMYAECNDMNA 380
SGLLPDDYTFSSLLKACA SKAL+EGRQLHCFAIKLGL HNIY+CPTLINMYA CNDMNA
Sbjct: 125 SGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNA 184
Query: 381 AREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL 440
AR VFDGM+ PCIVSYN+IITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL
Sbjct: 185 ARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL 244
Query: 441 LGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVRDTQAWSAM 500
LGALD+GRWIHEYVKK GFDK+VKVNTALIDMYAKCGS+ DAISIFEGM VRDTQAWSAM
Sbjct: 245 LGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAM 304
Query: 501 IVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHG 560
IVA+ATHGDGLKAIS+F+EMK+AGVRPDEITFLGLLYACSHAGLV+EG GYFYSM KNHG
Sbjct: 305 IVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHG 364
Query: 561 IVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVI 620
I PGIKHYGCMVDLLGRTGRLDEAYKFID L IKPTPILWRTLLSACSNHGNVDLAK+VI
Sbjct: 365 ITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVI 424
Query: 621 ERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEF 680
ERIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGV KVPGCSSVEVNNVVHEF
Sbjct: 425 ERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVGKVPGCSSVEVNNVVHEF 484
Query: 681 FSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIA 740
FSGDGVHSISVEL RALDELIKEIKL GY PDTSLVYHADMEEE KELVLRYHSEKLA+A
Sbjct: 485 FSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMA 544
Query: 741 FGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDF 800
FGLLNTPPGTTIRVVKNLRICGDCH AAKLISLIFGRQI+IRDVQRFHRF+DG+CSCCDF
Sbjct: 545 FGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDF 598
Query: 801 W 802
W
Sbjct: 605 W 598
BLAST of Sgr029061.1 vs. NCBI nr
Match:
KAG6574081.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1073.2 bits (2774), Expect = 1.2e-309
Identity = 522/600 (87.00%), Postives = 553/600 (92.17%), Query Frame = 0
Query: 201 CVDTSGSVFIKCPVLPKGRCKQLQSAAYRLFASAAVSSAMELKQIQAFTIKTNLHNDISV 260
C+ TS K PK K+ + + L + +S ELKQIQA+TIKTNLHNDISV
Sbjct: 5 CIPTSQFALTK----PK---KEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISV 64
Query: 261 LTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGYARSNTPYLAFSLFAQILC 320
LTKLINFCT NPTTSSMDHAHHLFD++ DKDIVLFN++ARGYARSN+PYL FSLFAQ+LC
Sbjct: 65 LTKLINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLC 124
Query: 321 SGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNIYLCPTLINMYAECNDMNA 380
SGLLPDDYTFSSLLKACA SKAL+EGRQLHCFAIKLGL HNIY+CPTLINMYA CNDMNA
Sbjct: 125 SGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNA 184
Query: 381 AREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL 440
AR VFDGM+ PCIVSYN+IITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL
Sbjct: 185 ARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCAL 244
Query: 441 LGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVRDTQAWSAM 500
LGALD+GRWIHEYVKK GFDK+VKVNTALIDMYAKCGS+ DAISIFEGM VRDTQAWSAM
Sbjct: 245 LGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWSAM 304
Query: 501 IVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHG 560
IVA+ATHGDGLKAIS+F+EMK+AGVRPDEITFLGLLYACSHAGLV+EG GYFYSM KNHG
Sbjct: 305 IVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVDEGRGYFYSMYKNHG 364
Query: 561 IVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVI 620
I PGIKHYGCMVDLLGRTGRLDEAYKFID L IKPTPILWRTLLSACSNHGNVDLAK+VI
Sbjct: 365 ITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKRVI 424
Query: 621 ERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEF 680
ERIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGVVKVPGCSSVEVNNVVHEF
Sbjct: 425 ERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVHEF 484
Query: 681 FSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIA 740
FSGDGVHSISVEL RALDELIKEIKL GY PDTSLVYHADMEEE KELVLRYHSEKLA+A
Sbjct: 485 FSGDGVHSISVELRRALDELIKEIKLAGYAPDTSLVYHADMEEEAKELVLRYHSEKLAMA 544
Query: 741 FGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDF 800
FGLLNTPPGTTIRVVKNLRICGDCH AAKLISLIFGRQI+IRDVQRFHRF+DG+CSCCDF
Sbjct: 545 FGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSCCDF 597
BLAST of Sgr029061.1 vs. NCBI nr
Match:
XP_022968061.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1072.8 bits (2773), Expect = 1.2e-309
Identity = 517/572 (90.38%), Postives = 543/572 (94.93%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPD 289
LF+ A S ELKQIQA+TIKTNLHNDISVLTKLINFCT PTTSSMDHAHHLFD++ D
Sbjct: 29 LFSKCA--SLRELKQIQAYTIKTNLHNDISVLTKLINFCTRYPTTSSMDHAHHLFDKMLD 88
Query: 290 KDIVLFNLLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQL 349
KDIVLFN++ARGYARSN+PYL FSLFAQ+LCSGLLPDDYTFSSLLKACA SKAL+EGRQL
Sbjct: 89 KDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQL 148
Query: 350 HCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQP 409
HCFAIKLG HNIY+CPTLINMYA CNDMNAAR VFDGM+ PCIVSYN+IITGYARSSQP
Sbjct: 149 HCFAIKLGFGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQP 208
Query: 410 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTAL 469
NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTAL
Sbjct: 209 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTAL 268
Query: 470 IDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDE 529
IDMYAKCGS+ DAISIFEGM VRDTQAWSAMIVAYATHGDGLKAIS+F+EMK+AGVRPDE
Sbjct: 269 IDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAYATHGDGLKAISMFEEMKKAGVRPDE 328
Query: 530 ITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFID 589
ITFLGLLYACSHAGLVEEG GYFYSM KNHG+ PGIKHYGCMVDLLGRTGRLDEAYKFID
Sbjct: 329 ITFLGLLYACSHAGLVEEGRGYFYSMYKNHGMTPGIKHYGCMVDLLGRTGRLDEAYKFID 388
Query: 590 GLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWED 649
L IKPTPILWRTLLSACSNHGNVDLAK+VIERIFELDDSHGGDYVILSNLCAR+GRWED
Sbjct: 389 ELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWED 448
Query: 650 VNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGY 709
VN LRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELI+EIKL GY
Sbjct: 449 VNRLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIQEIKLAGY 508
Query: 710 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAK 769
VPDTSLVYHADMEEE KELVLRYHSEKLA+AFGLLNTPPGTTIRVVKNLRICGDCH AAK
Sbjct: 509 VPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAK 568
Query: 770 LISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
LISLIFGRQI+IRDVQRFHRF+DG+CSCCDFW
Sbjct: 569 LISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Sgr029061.1 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 810.4 bits (2092), Expect = 1.8e-233
Identity = 381/565 (67.43%), Postives = 465/565 (82.30%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
+S EL QIQA+ IK+++ D+S + KLINFCT +PT SSM +A HLF+ + + DIV+FN
Sbjct: 40 NSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFN 99
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
+ARGY+R P FSLF +IL G+LPD+YTF SLLKACA +KAL+EGRQLHC ++KL
Sbjct: 100 SMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 159
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
GL+ N+Y+CPTLINMY EC D+++AR VFD + PC+V YN++ITGYAR ++PNEALSLF
Sbjct: 160 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 219
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RE+Q L+P ++T+LS++ SCALLG+LD+G+WIH+Y KK+ F KYVKVNTALIDM+AKC
Sbjct: 220 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 279
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GSL DA+SIFE M +DTQAWSAMIVAYA HG K++ +F+ M+ V+PDEITFLGLL
Sbjct: 280 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 339
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
ACSH G VEEG YF M GIVP IKHYG MVDLL R G L++AY+FID L I PT
Sbjct: 340 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT 399
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
P+LWR LL+ACS+H N+DLA++V ERIFELDDSHGGDYVILSNL AR +WE V+ LRK+
Sbjct: 400 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 459
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDR VKVPGCSS+EVNNVVHEFFSGDGV S + +LHRALDE++KE+KL GYVPDTS+V
Sbjct: 460 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 519
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
HA+M ++ KE+ LRYHSEKLAI FGLLNTPPGTTIRVVKNLR+C DCH AAKLISLIFG
Sbjct: 520 VHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFG 579
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
R++++RDVQRFH F+DGKCSC DFW
Sbjct: 580 RKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Sgr029061.1 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 492.3 bits (1266), Expect = 1.1e-137
Identity = 235/549 (42.81%), Postives = 356/549 (64.85%), Query Frame = 0
Query: 255 HNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGYARSNTPYLAFSL 314
H D+ T LI + +++A LFD+IP KD+V +N + GYA + A L
Sbjct: 197 HRDVVSYTALIKGYA---SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 256
Query: 315 FAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNIYLCPTLINMYAE 374
F ++ + + PD+ T +++ ACA S +++ GRQ+H + G N+ + LI++Y++
Sbjct: 257 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 316
Query: 375 CNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSI 434
C ++ A +F+ + ++S+N++I GY + EAL LF+E+ S P DVTMLSI
Sbjct: 317 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 376
Query: 435 IMSCALLGALDIGRWIHEYVKK--NGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVR 494
+ +CA LGA+DIGRWIH Y+ K G + T+LIDMYAKCG + A +F + +
Sbjct: 377 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 436
Query: 495 DTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYF 554
+W+AMI +A HG + LF M++ G++PD+ITF+GLL ACSH+G+++ G F
Sbjct: 437 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 496
Query: 555 YSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGN 614
+M++++ + P ++HYGCM+DLLG +G EA + I+ +E++P ++W +LL AC HGN
Sbjct: 497 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 556
Query: 615 VDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVE 674
V+L + E + +++ + G YV+LSN+ A GRW +V R L+ D+G+ KVPGCSS+E
Sbjct: 557 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 616
Query: 675 VNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRY 734
+++VVHEF GD H + E++ L+E+ ++ G+VPDTS V +MEEE KE LR+
Sbjct: 617 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRH 676
Query: 735 HSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKD 794
HSEKLAIAFGL++T PGT + +VKNLR+C +CH A KLIS I+ R+II RD RFH F+D
Sbjct: 677 HSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRD 736
Query: 795 GKCSCCDFW 802
G CSC D+W
Sbjct: 737 GVCSCNDYW 741
BLAST of Sgr029061.1 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 488.0 bits (1255), Expect = 2.0e-136
Identity = 238/596 (39.93%), Postives = 360/596 (60.40%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
S ELKQI A +KT L D +TK ++FC + ++ + +A +FD D L+N
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
L+ RG++ S+ P + L+ ++LCS + YTF SLLKAC++ A +E Q+H KL
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPN------ 416
G +++Y +LIN YA + A +FD + P VS+NS+I GY ++ + +
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 417 -------------------------EALSLFRELQASNLEPTDVTMLSIIMSCALLGALD 476
EAL LF E+Q S++EP +V++ + + +CA LGAL+
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 477 IGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYA 536
G+WIH Y+ K + LIDMYAKCG + +A+ +F+ + + QAW+A+I YA
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 537 THGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGI 596
HG G +AIS F EM++ G++P+ ITF +L ACS+ GLVEEG FYSM +++ + P I
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 597 KHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFE 656
+HYGC+VDLLGR G LDEA +FI + +KP ++W LL AC H N++L +++ E +
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 657 LDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDG 716
+D HGG YV +N+ A +W+ R+LMK++GV KVPGCS++ + HEF +GD
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 717 VHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLN 776
H ++ + ++++ GYVP+ + ++++ +E ++ HSEKLAI +GL+
Sbjct: 505 SHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIK 564
Query: 777 TPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
T PGT IR++KNLR+C DCH KLIS I+ R I++RD RFH F+DGKCSC D+W
Sbjct: 565 TKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of Sgr029061.1 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 485.0 bits (1247), Expect = 1.7e-135
Identity = 242/576 (42.01%), Postives = 372/576 (64.58%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLH-NDISVLTKLINFCTLNPTTSSMDHAHHLFDQIP 289
L + VSS +L+QI AF+I+ + +D + LI + P+ M +AH +F +I
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80
Query: 290 DK-DIVLFNLLARGYARSNTPYLAFSLFAQILCSGLL-PDDYTFSSLLKACASSKALKEG 349
++ ++N L RGYA AFSL+ ++ SGL+ PD +T+ L+KA + ++ G
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 350 RQLHCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARS 409
+H I+ G IY+ +L+++YA C D+ +A +VFD M +V++NS+I G+A +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 410 SQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVN 469
+P EAL+L+ E+ + ++P T++S++ +CA +GAL +G+ +H Y+ K G + + +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 470 TALIDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRA-GV 529
L+D+YA+CG + +A ++F+ M +++ +W+++IV A +G G +AI LF M+ G+
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 530 RPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAY 589
P EITF+G+LYACSH G+V+EG YF M + + I P I+H+GCMVDLL R G++ +AY
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 590 KFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVG 649
++I + ++P ++WRTLL AC+ HG+ DLA+ +I +L+ +H GDYV+LSN+ A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 650 RWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIK 709
RW DV +RK M GV KVPG S VEV N VHEF GD H S ++ L E+ ++
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Query: 710 LVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCH 769
GYVP S VY D+EEE KE + YHSEK+AIAF L++TP + I VVKNLR+C DCH
Sbjct: 501 SEGYVPQISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 560
Query: 770 TAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
A KL+S ++ R+I++RD RFH FK+G CSC D+W
Sbjct: 561 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Sgr029061.1 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 1.1e-134
Identity = 234/558 (41.94%), Postives = 353/558 (63.26%), Query Frame = 0
Query: 245 IQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGYAR 304
+ A +++ +DI + L+N + S++ A +F+++P +D V + L GY++
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLN---MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 141
Query: 305 SNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNIYL 364
+ P A F Q+L G P+++T SS++KA A+ + G QLH F +K G + N+++
Sbjct: 142 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 201
Query: 365 CPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQASNL 424
L+++Y M+ A+ VFD ++ VS+N++I G+AR S +AL LF+ +
Sbjct: 202 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 261
Query: 425 EPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADAIS 484
P+ + S+ +C+ G L+ G+W+H Y+ K+G L+DMYAK GS+ DA
Sbjct: 262 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 321
Query: 485 IFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGL 544
IF+ + RD +W++++ AYA HG G +A+ F+EM+R G+RP+EI+FL +L ACSH+GL
Sbjct: 322 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 381
Query: 545 VEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLL 604
++EG ++Y + K GIVP HY +VDLLGR G L+ A +FI+ + I+PT +W+ LL
Sbjct: 382 LDEG-WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 441
Query: 605 SACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVK 664
+AC H N +L E +FELD G +VIL N+ A GRW D +RK MK+ GV K
Sbjct: 442 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 501
Query: 665 VPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTS-LVYHADMEE 724
P CS VE+ N +H F + D H E+ R +E++ +IK +GYVPDTS ++ H D +E
Sbjct: 502 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 561
Query: 725 EGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRD 784
+E+ L+YHSEK+A+AF LLNTPPG+TI + KN+R+CGDCHTA KL S + GR+II+RD
Sbjct: 562 --REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 621
Query: 785 VQRFHRFKDGKCSCCDFW 802
RFH FKDG CSC D+W
Sbjct: 622 TNRFHHFKDGNCSCKDYW 633
BLAST of Sgr029061.1 vs. ExPASy TrEMBL
Match:
A0A6J1DA68 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019083 PE=3 SV=1)
HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 522/572 (91.26%), Postives = 546/572 (95.45%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPD 289
LF + +S ELKQIQAFTIKTNL NDISVLTK+INFCTLNP+TSSMDHAHHLFDQIPD
Sbjct: 32 LFLLSKCTSLRELKQIQAFTIKTNLQNDISVLTKIINFCTLNPSTSSMDHAHHLFDQIPD 91
Query: 290 KDIVLFNLLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQL 349
KDIVLFN++ARGYARSNTPYLAFSLF+Q+LCSGLLPDDYTFSSLLKACASSKA EGRQL
Sbjct: 92 KDIVLFNIMARGYARSNTPYLAFSLFSQVLCSGLLPDDYTFSSLLKACASSKAFSEGRQL 151
Query: 350 HCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQP 409
HCFAIKLGLNHNIY+CP+LIN+YAECNDMNAAR VFD M+ PCIVSYN+IITG+ARSSQP
Sbjct: 152 HCFAIKLGLNHNIYICPSLINLYAECNDMNAARGVFDEMEAPCIVSYNAIITGHARSSQP 211
Query: 410 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTAL 469
NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTAL
Sbjct: 212 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTAL 271
Query: 470 IDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDE 529
IDMYAKCGSL DAISIFE M VRDTQAWSAMIVAYATHGDGLKAIS+F+EMKRAGVRPDE
Sbjct: 272 IDMYAKCGSLVDAISIFEDMRVRDTQAWSAMIVAYATHGDGLKAISMFEEMKRAGVRPDE 331
Query: 530 ITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFID 589
ITFLGLLYACSHAGLVEEG GYF SMSK +GI PGIKHYGCMVDLLGRTG LDEAYKFID
Sbjct: 332 ITFLGLLYACSHAGLVEEGRGYFNSMSKYYGIAPGIKHYGCMVDLLGRTGHLDEAYKFID 391
Query: 590 GLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWED 649
G EIKPTPILWRTLLSACSN GNVDLAK+VIERIFELDDSHGGDYVILSNLCARVGRWED
Sbjct: 392 GSEIKPTPILWRTLLSACSNRGNVDLAKRVIERIFELDDSHGGDYVILSNLCARVGRWED 451
Query: 650 VNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGY 709
VNH+RKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELIKEIKLVGY
Sbjct: 452 VNHIRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLVGY 511
Query: 710 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAK 769
VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLN+PPGT IRVVKNLRICGDCHTAAK
Sbjct: 512 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNSPPGTPIRVVKNLRICGDCHTAAK 571
Query: 770 LISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
LIS IFGRQI+IRDVQRFHRF+DGKCSCCDFW
Sbjct: 572 LISFIFGRQIVIRDVQRFHRFEDGKCSCCDFW 603
BLAST of Sgr029061.1 vs. ExPASy TrEMBL
Match:
A0A6J1HTT7 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467412 PE=3 SV=1)
HSP 1 Score: 1072.8 bits (2773), Expect = 6.0e-310
Identity = 517/572 (90.38%), Postives = 543/572 (94.93%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPD 289
LF+ A S ELKQIQA+TIKTNLHNDISVLTKLINFCT PTTSSMDHAHHLFD++ D
Sbjct: 29 LFSKCA--SLRELKQIQAYTIKTNLHNDISVLTKLINFCTRYPTTSSMDHAHHLFDKMLD 88
Query: 290 KDIVLFNLLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQL 349
KDIVLFN++ARGYARSN+PYL FSLFAQ+LCSGLLPDDYTFSSLLKACA SKAL+EGRQL
Sbjct: 89 KDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQL 148
Query: 350 HCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQP 409
HCFAIKLG HNIY+CPTLINMYA CNDMNAAR VFDGM+ PCIVSYN+IITGYARSSQP
Sbjct: 149 HCFAIKLGFGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQP 208
Query: 410 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTAL 469
NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTAL
Sbjct: 209 NEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTAL 268
Query: 470 IDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDE 529
IDMYAKCGS+ DAISIFEGM VRDTQAWSAMIVAYATHGDGLKAIS+F+EMK+AGVRPDE
Sbjct: 269 IDMYAKCGSIVDAISIFEGMRVRDTQAWSAMIVAYATHGDGLKAISMFEEMKKAGVRPDE 328
Query: 530 ITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFID 589
ITFLGLLYACSHAGLVEEG GYFYSM KNHG+ PGIKHYGCMVDLLGRTGRLDEAYKFID
Sbjct: 329 ITFLGLLYACSHAGLVEEGRGYFYSMYKNHGMTPGIKHYGCMVDLLGRTGRLDEAYKFID 388
Query: 590 GLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWED 649
L IKPTPILWRTLLSACSNHGNVDLAK+VIERIFELDDSHGGDYVILSNLCAR+GRWED
Sbjct: 389 ELAIKPTPILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWED 448
Query: 650 VNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGY 709
VN LRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELI+EIKL GY
Sbjct: 449 VNRLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIQEIKLAGY 508
Query: 710 VPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAK 769
VPDTSLVYHADMEEE KELVLRYHSEKLA+AFGLLNTPPGTTIRVVKNLRICGDCH AAK
Sbjct: 509 VPDTSLVYHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAK 568
Query: 770 LISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
LISLIFGRQI+IRDVQRFHRF+DG+CSCCDFW
Sbjct: 569 LISLIFGRQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Sgr029061.1 vs. ExPASy TrEMBL
Match:
A0A6J1FZ61 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449232 PE=3 SV=1)
HSP 1 Score: 1072.0 bits (2771), Expect = 1.2e-309
Identity = 514/565 (90.97%), Postives = 541/565 (95.75%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
+S ELKQIQA+TIKTNLHNDISVLTKLINFCT +PTTSSMDHAHHLFD++ DKDIVLFN
Sbjct: 34 TSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRSPTTSSMDHAHHLFDKMLDKDIVLFN 93
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
++ARGYARSN+PYL FSLFAQ+L SGLLPDDYTFSSLLKACA SKAL+EGRQLHCFAIKL
Sbjct: 94 IMARGYARSNSPYLIFSLFAQVLFSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKL 153
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
G HNIY+CPTLINMYA CNDMNAAR VFDGM+ PCIVSYN+IITGYARSSQPNEALSLF
Sbjct: 154 GFGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLF 213
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RELQASNLEPTDVTMLSIIMSCALLGALD+GRWIHEYVKK GFDK+VKVNTALIDMYAKC
Sbjct: 214 RELQASNLEPTDVTMLSIIMSCALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKC 273
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GS+ DAISIFEGM VRDTQAWSAMIVA+ATHGDGLKAIS+F+EMK+AGVRPDEITFLGLL
Sbjct: 274 GSIVDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLL 333
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
YACSHAGLV+EGTGYFYSM KNHGI PGIKHYGCMVDLLGRTGRLDEAYKFID L IKPT
Sbjct: 334 YACSHAGLVDEGTGYFYSMYKNHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPT 393
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
PILWRTLLSACSNHGNVDLAK+VIERIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKL
Sbjct: 394 PILWRTLLSACSNHGNVDLAKRVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKL 453
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVEL RALDELIKEIKL GYVPDTSLV
Sbjct: 454 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELRRALDELIKEIKLAGYVPDTSLV 513
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
YHADMEEE KELVLRYHSEKLA+AFGLLNTPPGTTIRVVKNLRICGDCH AAKLISLIFG
Sbjct: 514 YHADMEEEAKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFG 573
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
RQI+IRDVQRFHRF+DG+CSCCDFW
Sbjct: 574 RQIVIRDVQRFHRFEDGQCSCCDFW 598
BLAST of Sgr029061.1 vs. ExPASy TrEMBL
Match:
A0A5A7STH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00400 PE=3 SV=1)
HSP 1 Score: 1048.1 bits (2709), Expect = 1.8e-302
Identity = 498/565 (88.14%), Postives = 538/565 (95.22%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
+S ELKQIQA+TIKTNL +DISVLTKLINFCTLNPTTS MDHAHHLFDQI DKDI+LFN
Sbjct: 40 TSLKELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFN 99
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
++ARGYARSN+PYLAFSLFAQ+LCSGLLPDDYTFSSLLKACASSKAL++G LHCFA+KL
Sbjct: 100 IMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKL 159
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
GLNHNIY+CPTLINMYAECNDMNAAR VFD M+ PCIVSYN+IITGYARSSQPNEALSLF
Sbjct: 160 GLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLF 219
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RELQAS++EPTDVTMLS+IMSCALLGALD+G+WIHEYVKK GFDKYVKVNTALIDM+AKC
Sbjct: 220 RELQASDIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKC 279
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GSL DAISIFEGM VRDTQAWSAMIVA+ATHGDGLK+IS+F+EMKRAGVRPDEITFLGLL
Sbjct: 280 GSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLL 339
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
YACSHAGLVE+G GYFYSMS+ +GI PGIKHYGCMVDLLGRTG LDEAY F+D LEIKPT
Sbjct: 340 YACSHAGLVEQGRGYFYSMSRTYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPT 399
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
PILWRTLLSACS HGNV++AK+VIERIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKL
Sbjct: 400 PILWRTLLSACSTHGNVEMAKRVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKL 459
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVH +SVEL RALDEL+KEIKLVGY+PDTSLV
Sbjct: 460 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLV 519
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
YHADM+EEGKELVLRYHSEKLA+AFGLLNTPPGTTIRV KNLRICGDCH AAKLIS IFG
Sbjct: 520 YHADMDEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFG 579
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
R+I+IRDVQRFH+F+DGKCSC DFW
Sbjct: 580 RKIVIRDVQRFHQFEDGKCSCGDFW 604
BLAST of Sgr029061.1 vs. ExPASy TrEMBL
Match:
A0A1S3BFK0 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=3 SV=1)
HSP 1 Score: 1048.1 bits (2709), Expect = 1.8e-302
Identity = 498/565 (88.14%), Postives = 538/565 (95.22%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
+S ELKQIQA+TIKTNL +DISVLTKLINFCTLNPTTS MDHAHHLFDQI DKDI+LFN
Sbjct: 40 TSLKELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFN 99
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
++ARGYARSN+PYLAFSLFAQ+LCSGLLPDDYTFSSLLKACASSKAL++G LHCFA+KL
Sbjct: 100 IMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKL 159
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
GLNHNIY+CPTLINMYAECNDMNAAR VFD M+ PCIVSYN+IITGYARSSQPNEALSLF
Sbjct: 160 GLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLF 219
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RELQAS++EPTDVTMLS+IMSCALLGALD+G+WIHEYVKK GFDKYVKVNTALIDM+AKC
Sbjct: 220 RELQASDIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKC 279
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GSL DAISIFEGM VRDTQAWSAMIVA+ATHGDGLK+IS+F+EMKRAGVRPDEITFLGLL
Sbjct: 280 GSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLL 339
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
YACSHAGLVE+G GYFYSMS+ +GI PGIKHYGCMVDLLGRTG LDEAY F+D LEIKPT
Sbjct: 340 YACSHAGLVEQGRGYFYSMSRTYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPT 399
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
PILWRTLLSACS HGNV++AK+VIERIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKL
Sbjct: 400 PILWRTLLSACSTHGNVEMAKRVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKL 459
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVH +SVEL RALDEL+KEIKLVGY+PDTSLV
Sbjct: 460 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLV 519
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
YHADM+EEGKELVLRYHSEKLA+AFGLLNTPPGTTIRV KNLRICGDCH AAKLIS IFG
Sbjct: 520 YHADMDEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFG 579
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
R+I+IRDVQRFH+F+DGKCSC DFW
Sbjct: 580 RKIVIRDVQRFHQFEDGKCSCGDFW 604
BLAST of Sgr029061.1 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 810.4 bits (2092), Expect = 1.2e-234
Identity = 381/565 (67.43%), Postives = 465/565 (82.30%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
+S EL QIQA+ IK+++ D+S + KLINFCT +PT SSM +A HLF+ + + DIV+FN
Sbjct: 40 NSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFN 99
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
+ARGY+R P FSLF +IL G+LPD+YTF SLLKACA +KAL+EGRQLHC ++KL
Sbjct: 100 SMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 159
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLF 416
GL+ N+Y+CPTLINMY EC D+++AR VFD + PC+V YN++ITGYAR ++PNEALSLF
Sbjct: 160 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 219
Query: 417 RELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKC 476
RE+Q L+P ++T+LS++ SCALLG+LD+G+WIH+Y KK+ F KYVKVNTALIDM+AKC
Sbjct: 220 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 279
Query: 477 GSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLL 536
GSL DA+SIFE M +DTQAWSAMIVAYA HG K++ +F+ M+ V+PDEITFLGLL
Sbjct: 280 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 339
Query: 537 YACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPT 596
ACSH G VEEG YF M GIVP IKHYG MVDLL R G L++AY+FID L I PT
Sbjct: 340 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT 399
Query: 597 PILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKL 656
P+LWR LL+ACS+H N+DLA++V ERIFELDDSHGGDYVILSNL AR +WE V+ LRK+
Sbjct: 400 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 459
Query: 657 MKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLV 716
MKDR VKVPGCSS+EVNNVVHEFFSGDGV S + +LHRALDE++KE+KL GYVPDTS+V
Sbjct: 460 MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMV 519
Query: 717 YHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFG 776
HA+M ++ KE+ LRYHSEKLAI FGLLNTPPGTTIRVVKNLR+C DCH AAKLISLIFG
Sbjct: 520 VHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFG 579
Query: 777 RQIIIRDVQRFHRFKDGKCSCCDFW 802
R++++RDVQRFH F+DGKCSC DFW
Sbjct: 580 RKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Sgr029061.1 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 492.3 bits (1266), Expect = 7.5e-139
Identity = 235/549 (42.81%), Postives = 356/549 (64.85%), Query Frame = 0
Query: 255 HNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGYARSNTPYLAFSL 314
H D+ T LI + +++A LFD+IP KD+V +N + GYA + A L
Sbjct: 197 HRDVVSYTALIKGYA---SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 256
Query: 315 FAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNIYLCPTLINMYAE 374
F ++ + + PD+ T +++ ACA S +++ GRQ+H + G N+ + LI++Y++
Sbjct: 257 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 316
Query: 375 CNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSI 434
C ++ A +F+ + ++S+N++I GY + EAL LF+E+ S P DVTMLSI
Sbjct: 317 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 376
Query: 435 IMSCALLGALDIGRWIHEYVKK--NGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVR 494
+ +CA LGA+DIGRWIH Y+ K G + T+LIDMYAKCG + A +F + +
Sbjct: 377 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 436
Query: 495 DTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYF 554
+W+AMI +A HG + LF M++ G++PD+ITF+GLL ACSH+G+++ G F
Sbjct: 437 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 496
Query: 555 YSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGN 614
+M++++ + P ++HYGCM+DLLG +G EA + I+ +E++P ++W +LL AC HGN
Sbjct: 497 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 556
Query: 615 VDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVE 674
V+L + E + +++ + G YV+LSN+ A GRW +V R L+ D+G+ KVPGCSS+E
Sbjct: 557 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 616
Query: 675 VNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRY 734
+++VVHEF GD H + E++ L+E+ ++ G+VPDTS V +MEEE KE LR+
Sbjct: 617 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRH 676
Query: 735 HSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKD 794
HSEKLAIAFGL++T PGT + +VKNLR+C +CH A KLIS I+ R+II RD RFH F+D
Sbjct: 677 HSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRD 736
Query: 795 GKCSCCDFW 802
G CSC D+W
Sbjct: 737 GVCSCNDYW 741
BLAST of Sgr029061.1 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 488.0 bits (1255), Expect = 1.4e-137
Identity = 238/596 (39.93%), Postives = 360/596 (60.40%), Query Frame = 0
Query: 237 SSAMELKQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFN 296
S ELKQI A +KT L D +TK ++FC + ++ + +A +FD D L+N
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 297 LLARGYARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKL 356
L+ RG++ S+ P + L+ ++LCS + YTF SLLKAC++ A +E Q+H KL
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 357 GLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPN------ 416
G +++Y +LIN YA + A +FD + P VS+NS+I GY ++ + +
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 417 -------------------------EALSLFRELQASNLEPTDVTMLSIIMSCALLGALD 476
EAL LF E+Q S++EP +V++ + + +CA LGAL+
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 477 IGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYA 536
G+WIH Y+ K + LIDMYAKCG + +A+ +F+ + + QAW+A+I YA
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 537 THGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGI 596
HG G +AIS F EM++ G++P+ ITF +L ACS+ GLVEEG FYSM +++ + P I
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 597 KHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFE 656
+HYGC+VDLLGR G LDEA +FI + +KP ++W LL AC H N++L +++ E +
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 657 LDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDG 716
+D HGG YV +N+ A +W+ R+LMK++GV KVPGCS++ + HEF +GD
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 717 VHSISVELHRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLN 776
H ++ + ++++ GYVP+ + ++++ +E ++ HSEKLAI +GL+
Sbjct: 505 SHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIK 564
Query: 777 TPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
T PGT IR++KNLR+C DCH KLIS I+ R I++RD RFH F+DGKCSC D+W
Sbjct: 565 TKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of Sgr029061.1 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 485.0 bits (1247), Expect = 1.2e-136
Identity = 242/576 (42.01%), Postives = 372/576 (64.58%), Query Frame = 0
Query: 230 LFASAAVSSAMELKQIQAFTIKTNLH-NDISVLTKLINFCTLNPTTSSMDHAHHLFDQIP 289
L + VSS +L+QI AF+I+ + +D + LI + P+ M +AH +F +I
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80
Query: 290 DK-DIVLFNLLARGYARSNTPYLAFSLFAQILCSGLL-PDDYTFSSLLKACASSKALKEG 349
++ ++N L RGYA AFSL+ ++ SGL+ PD +T+ L+KA + ++ G
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 350 RQLHCFAIKLGLNHNIYLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARS 409
+H I+ G IY+ +L+++YA C D+ +A +VFD M +V++NS+I G+A +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 410 SQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVN 469
+P EAL+L+ E+ + ++P T++S++ +CA +GAL +G+ +H Y+ K G + + +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 470 TALIDMYAKCGSLADAISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRA-GV 529
L+D+YA+CG + +A ++F+ M +++ +W+++IV A +G G +AI LF M+ G+
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 530 RPDEITFLGLLYACSHAGLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAY 589
P EITF+G+LYACSH G+V+EG YF M + + I P I+H+GCMVDLL R G++ +AY
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 590 KFIDGLEIKPTPILWRTLLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVG 649
++I + ++P ++WRTLL AC+ HG+ DLA+ +I +L+ +H GDYV+LSN+ A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 650 RWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIK 709
RW DV +RK M GV KVPG S VEV N VHEF GD H S ++ L E+ ++
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Query: 710 LVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCH 769
GYVP S VY D+EEE KE + YHSEK+AIAF L++TP + I VVKNLR+C DCH
Sbjct: 501 SEGYVPQISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 560
Query: 770 TAAKLISLIFGRQIIIRDVQRFHRFKDGKCSCCDFW 802
A KL+S ++ R+I++RD RFH FK+G CSC D+W
Sbjct: 561 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Sgr029061.1 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 478.4 bits (1230), Expect = 1.1e-134
Identity = 232/559 (41.50%), Postives = 355/559 (63.51%), Query Frame = 0
Query: 243 KQIQAFTIKTNLHNDISVLTKLINFCTLNPTTSSMDHAHHLFDQIPDKDIVLFNLLARGY 302
K+I + +++ + +++ T L++ + S++ A LFD + ++++V +N + Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 315
Query: 303 ARSNTPYLAFSLFAQILCSGLLPDDYTFSSLLKACASSKALKEGRQLHCFAIKLGLNHNI 362
++ P A +F ++L G+ P D + L ACA L+ GR +H +++LGL+ N+
Sbjct: 316 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 375
Query: 363 YLCPTLINMYAECNDMNAAREVFDGMDGPCIVSYNSIITGYARSSQPNEALSLFRELQAS 422
+ +LI+MY +C +++ A +F + +VS+N++I G+A++ +P +AL+ F ++++
Sbjct: 376 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 435
Query: 423 NLEPTDVTMLSIIMSCALLGALDIGRWIHEYVKKNGFDKYVKVNTALIDMYAKCGSLADA 482
++P T +S+I + A L +WIH V ++ DK V V TAL+DMYAKCG++ A
Sbjct: 436 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 495
Query: 483 ISIFEGMHVRDTQAWSAMIVAYATHGDGLKAISLFDEMKRAGVRPDEITFLGLLYACSHA 542
IF+ M R W+AMI Y THG G A+ LF+EM++ ++P+ +TFL ++ ACSH+
Sbjct: 496 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 555
Query: 543 GLVEEGTGYFYSMSKNHGIVPGIKHYGCMVDLLGRTGRLDEAYKFIDGLEIKPTPILWRT 602
GLVE G FY M +N+ I + HYG MVDLLGR GRL+EA+ FI + +KP ++
Sbjct: 556 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 615
Query: 603 LLSACSNHGNVDLAKQVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGV 662
+L AC H NV+ A++ ER+FEL+ GG +V+L+N+ WE V +R M +G+
Sbjct: 616 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 675
Query: 663 VKVPGCSSVEVNNVVHEFFSGDGVHSISVELHRALDELIKEIKLVGYVPDTSLVYHADME 722
K PGCS VE+ N VH FFSG H S +++ L++LI IK GYVPDT+LV +E
Sbjct: 676 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV--LGVE 735
Query: 723 EEGKELVLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRICGDCHTAAKLISLIFGRQIIIR 782
+ KE +L HSEKLAI+FGLLNT GTTI V KNLR+C DCH A K ISL+ GR+I++R
Sbjct: 736 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 795
Query: 783 DVQRFHRFKDGKCSCCDFW 802
D+QRFH FK+G CSC D+W
Sbjct: 796 DMQRFHHFKNGACSCGDYW 809
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022151060.1 | 0.0e+00 | 91.26 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... | [more] |
XP_023541252.1 | 0.0e+00 | 91.50 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
KAG7013140.1 | 6.2e-310 | 86.86 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6574081.1 | 1.2e-309 | 87.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022968061.1 | 1.2e-309 | 90.38 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q8LK93 | 1.8e-233 | 67.43 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 1.1e-137 | 42.81 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 2.0e-136 | 39.93 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
A8MQA3 | 1.7e-135 | 42.01 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q9LIQ7 | 1.1e-134 | 41.94 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DA68 | 0.0e+00 | 91.26 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... | [more] |
A0A6J1HTT7 | 6.0e-310 | 90.38 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... | [more] |
A0A6J1FZ61 | 1.2e-309 | 90.97 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... | [more] |
A0A5A7STH8 | 1.8e-302 | 88.14 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BFK0 | 1.8e-302 | 88.14 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02980.1 | 1.2e-234 | 67.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 7.5e-139 | 42.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 1.4e-137 | 39.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21065.1 | 1.2e-136 | 42.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 1.1e-134 | 41.50 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |