Sgr027308.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027308.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153048: 2965178 .. 2965962 (-)
Sequence length	693
RNA-Seq Expression	Sgr027308.1
Synteny	Sgr027308.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACACCGATCTCTTGTTTTACTGTCTTCAAAACTCTCTTCCCCGAACGCAAACTCAGGCACTCTTTACCCTCAGGACTTTCATCCATAAATTCCCCAGCGGGAAAATCGATAGTGGGGATCAATTTTCTCTTCCCATTAACCTTGTCACTCTTCGACCCTGTACATCCGAAATCAATACTCCGCCTCGGTTCACTCAAGCCCTCGGCTCCCTCATTAACTTCCAAACCCTCAACTCCGCTACAAATTGAAGGAACCCCCAACTTCCCATTCGAGGGCAGGCCCGAATCCCGATTGTCCACCGTCTCCGCTTTCATCTCAGAAGAGGCCCGGGTACTCCGTCCAGACAAAGCCTTCGTCCTGGGGGAGTTATCAAGAACGCGGTCAACAGCAGAATGCTCGGCGCTTTGCCCTTTCGCAGCAAGACGGGAGCTCCGCCTCCGAAGACCTCCGGGAGTGGAGACGCAATCGGAGGGAAACCCAGTAGAATCAGTGATAGAAGCGGCGGGGGAAGGAGAGGAAAGAAGGGGAGGAGAGTGAGGAGGGTGGGTTTCACGAAGTTGAGAAGGCGTAGAGGGCTGGAGAGCGTTGGAAGGGGTTTTTAGGGATTTGGGAGTGGGCGTGGGAGGGAGAACTTCCCGAGACCTCAGAACCGTCATTATGAGGAAGCGCGTAGTGGAGTGGAGTGGAGTGGAGCGGAGCGGAGCGGAGGACTAGTGGCCGGAAAACTGGTGGCGCCGTGTCAGAGAGAATCAGAGAGAGAAGAGTTGGTGGTTCGTTAG

mRNA sequence

ATGTCCACACCGATCTCTTGTTTTACTGTCTTCAAAACTCTCTTCCCCGAACGCAAACTCAGGCACTCTTTACCCTCAGGACTTTCATCCATAAATTCCCCAGCGGGAAAATCGATAGTGGGGATCAATTTTCTCTTCCCATTAACCTTGTCACTCTTCGACCCTGTACATCCGAAATCAATACTCCGCCTCGGTTCACTCAAGCCCTCGGCTCCCTCATTAACTTCCAAACCCTCAACTCCGCTACAAATTGAAGGAACCCCCAACTTCCCATTCGAGGGCAGGCCCGAATCCCGATTGTCCACCGTCTCCGCTTTCATCTCAGAAGAGGCCCGGGTACTCCGTCCAGACAAAGCCTTCGTCCTGGGGGAGTTATCAAGAACGCGGTCAACAGCAGAATGCTCGGCGCTTTGCCCTTTCGCAGCAAGACGGGAGCTCCGCCTCCGAAGACCTCCGGGAGTGGAGACGCAATCGGAGGGAAACCCAGTAGAATCAGTGATAGAAGCGGCGGGGGAAGGAGAGGAAAGAAGGGGAGGAGAGGAGAACTTCCCGAGACCTCAGAACCGTCATTATGAGGAAGCGCGTAGTGGAGTGGAGTGGAGTGGAGCGGAGCGGAGCGGAGGACTAGTGGCCGGAAAACTGGTGGCGCCGTGTCAGAGAGAATCAGAGAGAGAAGAGTTGGTGGTTCGTTAG

Coding sequence (CDS)

ATGTCCACACCGATCTCTTGTTTTACTGTCTTCAAAACTCTCTTCCCCGAACGCAAACTCAGGCACTCTTTACCCTCAGGACTTTCATCCATAAATTCCCCAGCGGGAAAATCGATAGTGGGGATCAATTTTCTCTTCCCATTAACCTTGTCACTCTTCGACCCTGTACATCCGAAATCAATACTCCGCCTCGGTTCACTCAAGCCCTCGGCTCCCTCATTAACTTCCAAACCCTCAACTCCGCTACAAATTGAAGGAACCCCCAACTTCCCATTCGAGGGCAGGCCCGAATCCCGATTGTCCACCGTCTCCGCTTTCATCTCAGAAGAGGCCCGGGTACTCCGTCCAGACAAAGCCTTCGTCCTGGGGGAGTTATCAAGAACGCGGTCAACAGCAGAATGCTCGGCGCTTTGCCCTTTCGCAGCAAGACGGGAGCTCCGCCTCCGAAGACCTCCGGGAGTGGAGACGCAATCGGAGGGAAACCCAGTAGAATCAGTGATAGAAGCGGCGGGGGAAGGAGAGGAAAGAAGGGGAGGAGAGGAGAACTTCCCGAGACCTCAGAACCGTCATTATGAGGAAGCGCGTAGTGGAGTGGAGTGGAGTGGAGCGGAGCGGAGCGGAGGACTAGTGGCCGGAAAACTGGTGGCGCCGTGTCAGAGAGAATCAGAGAGAGAAGAGTTGGTGGTTCGTTAG

Protein sequence

MSTPISCFTVFKTLFPERKLRHSLPSGLSSINSPAGKSIVGINFLFPLTLSLFDPVHPKSILRLGSLKPSAPSLTSKPSTPLQIEGTPNFPFEGRPESRLSTVSAFISEEARVLRPDKAFVLGELSRTRSTAECSALCPFAARRELRLRRPPGVETQSEGNPVESVIEAAGEGEERRGGEENFPRPQNRHYEEARSGVEWSGAERSGGLVAGKLVAPCQRESEREELVVR

Homology

The following BLAST results are available for this feature:

BLAST of Sgr027308.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr027308.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr027308.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr027308.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr027308	Sgr027308	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr027308.1.exon2	Sgr027308.1.exon2	exon
Sgr027308.1.exon1	Sgr027308.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr027308.1	cds.Sgr027308.1_2	CDS
cds.Sgr027308.1	cds.Sgr027308.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr027308.1	Sgr027308.1-protein	polypeptide