Sgr024577.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr024577.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	U6 snRNA phosphodiesterase
Location	tig00001291: 4521796 .. 4525317 (+)
Sequence length	832
RNA-Seq Expression	Sgr024577.1
Synteny	Sgr024577.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTCTGAGAGCCTCGTATGGAGGCACGTCCTCAGGCTCAGATGAAGAAGCGGACACAGTCTACCCTTCATCAGCTGCTGCTGCACCATCACAAGTTTCCGACAATGGGAGCCCTCCGCCTCTGCCTCCGCCGCCGCTCTTACTTCTCGATCTTCCCAATTCCATCTGTATCGCTCGTCCCCTTACATTTACTTTCTGGTTTTGATTCCTCTTAATTTCTTTCTACATAGCTTCACTTATCAAGTGCATCAATATTTTCTTGCTCAGCCGCTTTAGATGATTTACCGATCGGCCAGTCCAGTAGAGTTCGGAGCTTCCCTCACGTTGAAGGAAACTATGCGCTACACGTGTATATCCCAGGTCCTTCCCATTTACTCAATTTGATTCTTAAACCTACTTTTCTTTTTTCCATTTTAATCTTACTGAAGGGGCTTTTTGTTTTGTTGCATATTCTGAAATCCTAGTTACTGTTTGTTGGCATATTGTTAGTTGGAAGTACGGCTACGATTCTAGGGAGCTTCTCTTTGGTTGAACATTGTTAGGCAGTTTGTTTGAGTCGAGCATGGAATGAATGTCTAACAATTATGCCATGAGCTCTTGTTTATGGCTACTTTTACGGTGCTGGTTTCTTTTTCCTTAAAGAAGACAAGGAATAAATATACGTTGATTTCAATTTGGTTTTTGCCCCTGAACTCTTCCCTTGTGTAAAGTTTAAAACTTGACCACCTAAACCTGCTATATTGCCTCTTACACAAAGTCTACATGAGTAGTAATAGCTATCACTTGCCTGTATTTGAGTACAACTATAGTTTTGCTTTTTATTGTAGTTATGAAATCCTGGAATGTCAGATAGAACCAACTAAGAAAATCGATAATATCTATGATAAGGTTTCAATAATACATACAATGTCGGATAGTGGCTACTTCCATAGTGTTGGCTTTTTAAATCTTGAATTAGATCTTTTCTCTGAGCTTTCTTCAATATCAACATTTTCACAGTGACAAAAACCTGTGATCAATGTATCCACAATCATCTAAATGTTCGTACTTGTCGCGGAAAAGCAGCTAAAGTAGACATTACTTATTTGAAAGAAATATAAATATTTCTTTTTGGTATAAGGTAAACATTCTCAATGCTGAATTTGAACAACATGACCTTATAATTGTTGTTTATGCCATTCCCCCCTCCTCTTTCTTCTCCCCCACCTTCCTCTTCTCATTCTTTGGGAAAGGAACCACTATAATTTTGCTCCCGGGAAATTAAGTTTGATGCAATATTGATTGTTTAACTTATTGGCTGCTGTAACTATCTCTGTGAAGATCCAAGTGAAATAGGGATTTTTTATCCTCCTTCGAGGGGAATTTCTTCTATCATTGGTGATGAGCACGAATATTCGAAAGCTTCAAAGGAATTTTTAGATATTATTGAGGACCTTTCTAATTTTTTCGAGTATGCAGTAGGTCCCTCGTCTGATTTGGGGTTTTGTTTTCAATGGTTCTTAGTGGTGTTTAGAAGCTTTGATGGTTGTTGGAGCAGTTTCTCCTCTTGGAATCTTCATTGTTCTCTCTTCTAGTGTTTTGTCCTTTAGAAAGTGGGTTAGGTGCTGTTTTTCGATGGATAGGGCTTTAGCTTTAGTGGCTCTTTGGTTTTTGTGGTTCTACTTCTGGAATATTTTTGTTTGTTTGTAGGCCACTTTGTTCTTCAATGCTTTATTTTGGCTTTTGTAATTCTTGGAGATTGTTCTTTTCACTCCCTTAGGAGTTTGTATTCTTGAACCATTTTCTTTCTTTTCATATATCAATGAAAAGTTTGTTTTTGGTTCAAAAATATTGATTGTTTAACATTTTTGTTTTTCTCAATTAATTTCAATGGTAGATGCCAGGTTTTTACTGTGCTACCTACTCGTACATTTAGAATGCAGTAAAATGAGGGGAAGCACACACAAACTCGTTTATTTCTGAGTTTTCTTTATTTTCGTCCCTGTGGTCAATCTTATTTAATTGGACTCGAGCAACTTTTACTGTTAGTGATTTTCTATTTGTTCTATGTAATACAATGACCTTTCATATGGATGCTACATATGGCTATAATATTTGGTTTTTCATGTTCCCAGTTTATATTCCAACTACAACAAGGAAGGAGGTGGCCCTGTTTCTGAAGAAAGTCTCCTCACGTGTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTGAACTTTTTATGTAAAGATGACCACAAGCTTGAGCAAGCGTTGGCCAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATTCGAGTGCACCAGATTGACTCAATAGTGTCAATGCTTTGTCAGAAGCTTCAGTTTCAAAGGCGGTAAGTTAGAAACTCTACATTTGGTTAGTGACTTGTCGAATTTCCAATTTGTTTTTTACGCTATGCATAGTTTGGTTTTGAGCAGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGACCTCTCTCGGACCTTTCTGTCAATGGAAATTGTTGCTGGAGGGCTAATGGAGGTGAGTCAGATTTGATGGATTACCATTTCCATCATCTTTGCATTTTTGGCATCGAAGATTCTTTTACATTGTGAAATTATGGGCTGATAATATGGAAGCTTCCACTTCTCCTAAATTTTCTTTTAAGCTCATGTTAGTTTCTATTAAATTATCACAGTATGACTAGTCCAAAAACTCCAAGGAATTAGGTTAATGGTTAACTCTTTGCCTCACATTGTGGTTTGGTCTTTAAATTGATTTTCAAAGGCTGATGTATGGACTAGAAGTTTTGAATTAGGATATATGACAATGATTTGAACTTAAAATCTTCTGCTCTGCTATGCTGAATATTGTAAGATGGTACAATTGTTTCTGTAGAATTTGTCGAGACATTATCATATATATACATATGTGCATGCATGGTCATACGTGTGTTTTGCTTACATGTTGTCCAACTGATGAAATATTGGAAAATAGGATTAACTTGCCAAAACATTATGCAACAATAATTTGTTGATACGCTGGTGGTATGTTATTCTCTTTAACACTCTCATGTCATCTTTTGAAATTACAATAAGTTGTATAGTTGTATATAATTGAGATCCTTTGACATAGATTATGATGATTTCATCTGAGTTTTACATGGCTGAGATTGAAAATATTCCATTGAAGCAAGAGTGATCCATTTATTTTCAATTGGTTGCAGATAAGAAAACAAATTCAAGCTGTTGATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGTTAGTCGTATTGATATTTCGTTTCCTTTTCCATCTATATCTGAAAAGATGACCTTCTGGACTTCTATTATGTAGGAAGGGAGACCACATATATCCTTAGCCTGGGCATTGGGTGACCTTAGCAAATTATTGAGTCGAGCAGTTGGTGACGAAATGAAGTGGTCCGCAGTTAAGGCACCATTGAAGAGATGTATGTTCACCACTAAATTCAGTGGCATTGAAT

mRNA sequence

ATGGATGCTCTGAGAGCCTCGTATGGAGGCACGTCCTCAGGCTCAGATGAAGAAGCGGACACAGTCTACCCTTCATCAGCTGCTGCTGCACCATCACAAGTTTCCGACAATGGGAGCCCTCCGCCTCTGCCTCCGCCGCCGCTCTTACTTCTCGATCTTCCCAATTCCATCTGTATCGCTCCCGCTTTAGATGATTTACCGATCGGCCAGTCCAGTAGAGTTCGGAGCTTCCCTCACGTTGAAGGAAACTATGCGCTACACGTGTATATCCCAGTTTATATTCCAACTACAACAAGGAAGGAGGTGGCCCTGTTTCTGAAGAAAGTCTCCTCACGTGTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTGAACTTTTTATGTAAAGATGACCACAAGCTTGAGCAAGCGTTGGCCAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATTCGAGTGCACCAGATTGACTCAATAGTGTCAATGCTTTGTCAGAAGCTTCAGTTTCAAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGACCTCTCTCGGACCTTTCTGTCAATGGAAATTGTTGCTGGAGGGCTAATGGAGATAAGAAAACAAATTCAAGCTGTTGATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGGGAGACCACATATATCCTTAGCCTGGGCATTGGGTGACCTTAGCAAATTATTGAGTCGAGCAGTTGGTGACGAAATGAAGTGGTCCGCAGTTAAGGCACCATTGAAGAGATGTATGTTCACCACTAAATTCAGTGGCATTGAAT

Coding sequence (CDS)

ATGGATGCTCTGAGAGCCTCGTATGGAGGCACGTCCTCAGGCTCAGATGAAGAAGCGGACACAGTCTACCCTTCATCAGCTGCTGCTGCACCATCACAAGTTTCCGACAATGGGAGCCCTCCGCCTCTGCCTCCGCCGCCGCTCTTACTTCTCGATCTTCCCAATTCCATCTGTATCGCTCCCGCTTTAGATGATTTACCGATCGGCCAGTCCAGTAGAGTTCGGAGCTTCCCTCACGTTGAAGGAAACTATGCGCTACACGTGTATATCCCAGTTTATATTCCAACTACAACAAGGAAGGAGGTGGCCCTGTTTCTGAAGAAAGTCTCCTCACGTGTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTGAACTTTTTATGTAAAGATGACCACAAGCTTGAGCAAGCGTTGGCCAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATTCGAGTGCACCAGATTGACTCAATAGTGTCAATGCTTTGTCAGAAGCTTCAGTTTCAAAGGCGATATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGACCTCTCTCGGACCTTTCTGTCAATGGAAATTGTTGCTGGAGGGCTAATGGAGATAAGAAAACAAATTCAAGCTGTTGATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGGGAGACCACATATATCCTTAGCCTGGGCATTGGGTGACCTTAGCAAATTATTGAGTCGAGCAGTTGGTGACGAAATGAAGTGGTCCGCAGTTAAGGCACCATTGAAGAGATGTATGTTCACCACTAAATTCAGTGGCATTGAAT

Protein sequence

MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSICIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIEX

Homology

[Close]

BLAST of Sgr024577.1 vs. NCBI nr
Match: XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 2.5e-115
Identity = 219/278 (78.78%), Postives = 242/278 (87.05%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNG-SPPPLPPPPLLLLDLPNSICI 60
           MDALRASYGG+S  SDEE DTV PSSA+ +  Q  D   S  PLPPPPL LL+ PNS C+
Sbjct: 1   MDALRASYGGSS--SDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCV 60

Query: 61  APALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLV 120
              LDDLPI Q++RVRSFPHV+GNYALHVYIPVY+PT  RKEVALF+KK+SS VPALHLV
Sbjct: 61  ---LDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLV 120

Query: 121 DIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDF 180
           DIDIPL+ LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKLQ  RRYWIDF
Sbjct: 121 DIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDF 180

Query: 181 SKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWA 240
           SKWETFVNDDLSRTFLSMEI+ GGLMEIRKQIQ V+EVYKLHNLPEFYKE RPHISLAWA
Sbjct: 181 SKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWA 240

Query: 241 LGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           LGD+S++ S+AV +E+K SAVK P KRC+FTTKF+GIE
Sbjct: 241 LGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]

BLAST of Sgr024577.1 vs. NCBI nr
Match: XP_023549871.1 (U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.9 bits (1086), Expect = 2.1e-114
Identity = 224/282 (79.43%), Postives = 244/282 (86.52%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS----QVSD-NGSPPPLPPPPLLLLDLPN 60
           M+AL ASYGG+S  SDE+ DTV PSSA+A+ S    Q+SD   S  PLPPPPL LLD PN
Sbjct: 1   MEALMASYGGSS--SDEDVDTVSPSSASASASASLPQLSDETESFLPLPPPPLSLLDFPN 60

Query: 61  SICIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPA 120
           S     ALDDLPIGQ++RVRSFPHV+GNYA+H+YIPVYIPT  RKEVALFLKK+S  VPA
Sbjct: 61  S---TSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPA 120

Query: 121 LHLVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRY 180
           LHLVDIDIPL+ LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKLQ QRRY
Sbjct: 121 LHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRY 180

Query: 181 WIDFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHIS 240
           WIDFSKWETFVNDDLSRTFLSMEI+AGGLMEIRK IQ V+EVYKLHNLPEFYKEGRPHIS
Sbjct: 181 WIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHIS 240

Query: 241 LAWALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           LAWALGDLSKLLS++V DEMK S VK   KRC+FT KF+GIE
Sbjct: 241 LAWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIE 277

[Close]

BLAST of Sgr024577.1 vs. NCBI nr
Match: XP_038875355.1 (U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.9e-113
Identity = 223/280 (79.64%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS--QVSDNG-SPPPLPPPPLLLLDLPNSI 60
           MDALRASYGG+S  SDEEADTV PSSA+ + S  Q+SD   S  PLPPP   LL  PNS 
Sbjct: 1   MDALRASYGGSS--SDEEADTVSPSSASTSASTPQLSDETVSFLPLPPPSPSLLHFPNST 60

Query: 61  CIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALH 120
            I   LDDLPI Q++RVRSFPHV+GNYALH+YIPVY+PT  RKEVALFLKKVSS VPALH
Sbjct: 61  SI---LDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPALH 120

Query: 121 LVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWI 180
           LVDID+PL+ LCKDDHKLEQALAREFH+SLSRTVPIRVHQIDSIV+ML QKLQ QRRYWI
Sbjct: 121 LVDIDVPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWI 180

Query: 181 DFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLA 240
           DFSKWETFVNDDLSRTFLSMEI+ GGLMEIRKQIQ V+EVYKLHNLPEFYKE RPHISLA
Sbjct: 181 DFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISLA 240

Query: 241 WALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           WA+GDLSKLLS+AV +EMK SAV   LKRC+FTTKF GIE
Sbjct: 241 WAIGDLSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIE 275

[Close]

BLAST of Sgr024577.1 vs. NCBI nr
Match: XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.9e-113
Identity = 223/280 (79.64%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS--QVSDNG-SPPPLPPPPLLLLDLPNSI 60
           MDALRASYGG+S  SDEEADTV PSSA+ + S  Q+SD   S  PLPPP   LL  PNS 
Sbjct: 1   MDALRASYGGSS--SDEEADTVSPSSASTSASTPQLSDETVSFLPLPPPSPSLLHFPNST 60

Query: 61  CIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALH 120
            I   LDDLPI Q++RVRSFPHV+GNYALH+YIPVY+PT  RKEVALFLKKVSS VPALH
Sbjct: 61  SI---LDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPALH 120

Query: 121 LVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWI 180
           LVDID+PL+ LCKDDHKLEQALAREFH+SLSRTVPIRVHQIDSIV+ML QKLQ QRRYWI
Sbjct: 121 LVDIDVPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWI 180

Query: 181 DFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLA 240
           DFSKWETFVNDDLSRTFLSMEI+ GGLMEIRKQIQ V+EVYKLHNLPEFYKE RPHISLA
Sbjct: 181 DFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISLA 240

Query: 241 WALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           WA+GDLSKLLS+AV +EMK SAV   LKRC+FTTKF GIE
Sbjct: 241 WAIGDLSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIE 275

[Close]

BLAST of Sgr024577.1 vs. NCBI nr
Match: KAG6579639.1 (U6 snRNA phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.9 bits (1073), Expect = 6.7e-113
Identity = 224/288 (77.78%), Postives = 243/288 (84.38%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS----------QVSD-NGSPPPLPPPPLL 60
           M+AL ASYGG+S  SDE+ DTV PSSA+A+ S          Q+SD   S  PLPPPPL 
Sbjct: 1   MEALMASYGGSS--SDEDVDTVSPSSASASASASASASASLPQLSDETESFLPLPPPPLS 60

Query: 61  LLDLPNSICIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKV 120
           LLD PNS     ALDDLPIGQ++RVRSFPHV+GNYALH+YIPVYIPT  RKEVALFLKK+
Sbjct: 61  LLDFPNS---TSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYIPTNARKEVALFLKKL 120

Query: 121 SSRVPALHLVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKL 180
           S  VPALHLVDIDIPL+ LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKL
Sbjct: 121 SKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKL 180

Query: 181 QFQRRYWIDFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKE 240
           Q QRRYWIDFSKWETFVNDDLSRTFLSMEI+AGGLMEIRK IQ V+EVYKLHNLPEFYKE
Sbjct: 181 QSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKE 240

Query: 241 GRPHISLAWALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           GRPHISLAWALGDLSKLLS++V DEMK S VK   KR +FT KF+GIE
Sbjct: 241 GRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIE 283

[Close]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot
Match: Q91W78 (U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 72/241 (29.88%), Postives = 118/241 (48.96%), Query Frame = 0


Query: 9   GGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSI-CIAPALDDLP 68
           G +SSGS++EA+ V     AA  S+           P P   L +P+S+  + P+ ++ P
Sbjct: 8   GYSSSGSEDEAEAV-----AAGRSKPGTGFHRCGQNPVPSEKLPVPDSVLSMFPSTEEGP 67

Query: 69  IGQSS----RVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDI 128
              S+    R+R+FPH  GN+A H+YIP       R  +   L +    VP L L++   
Sbjct: 68  EDDSAKHGGRIRTFPHERGNWATHIYIPYEAKEDFRDLLDALLPRAQMFVPRLVLME--- 127

Query: 129 PLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKWE 188
                             EFH+SLS++V +R H I   V +L  ++   +R++   ++ +
Sbjct: 128 ------------------EFHVSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVK 187

Query: 189 TFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGDL 245
            + N + +RTF+ +E V+ G  +    +  VD   K  +L  FY++   HISLAW +GD 
Sbjct: 188 IYTNQEKTRTFIGLE-VSSGHAQFLDLVSEVDRAMKEFDLTTFYQDPSFHISLAWCVGDA 221

[Close]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot
Match: Q6DEF6 (U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.5e-17
Identity = 64/180 (35.56%), Postives = 93/180 (51.67%), Query Frame = 0


Query: 73  RVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDIPLNFLCKDD 132
           R+RSF H  GN+A +V+ P Y P     EV   L K+ +   A      DIPL       
Sbjct: 81  RLRSFQHERGNWATYVFFP-YDPEEAFLEV---LNKMMAAAEA-----HDIPL------- 140

Query: 133 HKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKWETFVNDDLSR 192
                 ++ EFH+SLS+TV +R H I   V  +   L   ++++    K + + N + +R
Sbjct: 141 -----TVSEEFHLSLSKTVVLRHHWIQPFVQSIRTSLTHFQKFYCVAYKLKVYSNAEKTR 200

Query: 193 TFLSMEIVAG--GLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSRA 251
           TFL ME+  G   L+E+ K    VDE  K  NL  FY++   HISLAW +GD ++ L +A
Sbjct: 201 TFLGMEVSTGTPHLLELSK---IVDETMKEFNLSTFYEDPSFHISLAWCVGDQTERLKKA 236

[Close]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot
Match: Q5I0I5 (U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 68/238 (28.57%), Postives = 114/238 (47.90%), Query Frame = 0


Query: 9   GGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLP----PPPLLLLDLPNSICIAPALD 68
           G +SSGS++EA+ V  ++  + P          PLP    P P  +L++  S    P  D
Sbjct: 8   GYSSSGSEDEAEAV--AAGRSKPGSGLHRCGQNPLPSQRFPVPDSVLNMFPSTEEGPEDD 67

Query: 69  DLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDIP 128
               G   R+R+FPH  GN+A H+YIP       +  + + L +     P L  ++    
Sbjct: 68  SARHG--GRIRTFPHERGNWATHIYIPYEANEEFQDLLDVLLPRAQMFAPRLVQME---- 127

Query: 129 LNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKWET 188
                            EFH+SLS++V +R H I   V +L  ++   +R++   ++ + 
Sbjct: 128 -----------------EFHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKI 187

Query: 189 FVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGD 243
           + N + +RTF+ +E V+ G  +    +  VD V K  +L  FY++   H+SLAW +GD
Sbjct: 188 YTNQEKTRTFIGLE-VSSGHAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAWCVGD 219

[Close]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot
Match: Q0II50 (U6 snRNA phosphodiesterase OS=Bos taurus OX=9913 GN=USB1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.7e-15
Identity = 71/240 (29.58%), Postives = 115/240 (47.92%), Query Frame = 0


Query: 9   GGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSIC-IAPALDDLP 68
           G +SSGS++EA+    + A   P     +    PLP      L +P+S+  + P+ ++ P
Sbjct: 8   GYSSSGSEDEAE----AGARVRPGAEGRSRGQSPLPGQ---RLPVPDSVLHMFPSTEEGP 67

Query: 69  IGQSS----RVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDI 128
           +  S+    RVR+FPH  GN+A HVYIP                   +R   L L+D   
Sbjct: 68  VDDSAKHGGRVRTFPHERGNWATHVYIP-----------------YEAREEFLDLLDA-- 127

Query: 129 PLNFLCKDDHKLEQALARE-FHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKW 188
               LC     + + +  E FH+SLS++V +R H I   V  L  ++    R+     + 
Sbjct: 128 ---LLCHAQTYVPRLVRMEAFHLSLSQSVVLRHHWILPFVQALKDRVASFHRFCFTTDQV 187

Query: 189 ETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGD 243
           + + N + +RTF+ +E+ +G        +  VD V +  +L  FY++   HISLAW +GD
Sbjct: 188 KIYTNQEKTRTFVGLEVTSGH-AHFLDLVAEVDRVMEEFDLSTFYQDPSFHISLAWCVGD 217

[Close]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot
Match: Q7ZYI9 (U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 68/234 (29.06%), Postives = 103/234 (44.02%), Query Frame = 0


Query: 12  SSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLL---LDLPNSICIAPALDDLPI 71
           SS  ++E +T  P                PPLPPP  +L    D+     +     D   
Sbjct: 7   SSSEEDEGETSEPPGRRL-----------PPLPPPTTVLRMFQDMEGDEDL-----DENT 66

Query: 72  GQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVDIDIPLNFL 131
               R+RSF H  GN+A +VYIP                      P    +D+   L  +
Sbjct: 67  KHEGRIRSFKHERGNWATYVYIPFQ--------------------PQEEFLDLLDELVSV 126

Query: 132 CKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFSKWETFVND 191
             ++  L   ++ EFHIS S+TV +R H I+  V  L  KL    R+     + + + N 
Sbjct: 127 AAENGVLLTKMS-EFHISQSQTVVLRHHWINPFVESLKDKLHCMYRFLCIAERIKVYTNQ 186

Query: 192 DLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWALGD 243
           + +RTFL +E V+ G+  + + +  VD   +  NL  FY+E   H+SLAW +GD
Sbjct: 187 EKTRTFLGLE-VSVGMEHLLEVVSEVDRSLQEFNLQTFYQEPSFHVSLAWCVGD 202

[Close]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL
Match: A0A1S3CTB0 (U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-115
Identity = 219/278 (78.78%), Postives = 242/278 (87.05%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNG-SPPPLPPPPLLLLDLPNSICI 60
           MDALRASYGG+S  SDEE DTV PSSA+ +  Q  D   S  PLPPPPL LL+ PNS C+
Sbjct: 1   MDALRASYGGSS--SDEEVDTVSPSSASTSTPQFFDETVSSLPLPPPPLSLLNFPNSTCV 60

Query: 61  APALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLV 120
              LDDLPI Q++RVRSFPHV+GNYALHVYIPVY+PT  RKEVALF+KK+SS VPALHLV
Sbjct: 61  ---LDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLV 120

Query: 121 DIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDF 180
           DIDIPL+ LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKLQ  RRYWIDF
Sbjct: 121 DIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDF 180

Query: 181 SKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWA 240
           SKWETFVNDDLSRTFLSMEI+ GGLMEIRKQIQ V+EVYKLHNLPEFYKE RPHISLAWA
Sbjct: 181 SKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISLAWA 240

Query: 241 LGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           LGD+S++ S+AV +E+K SAVK P KRC+FTTKF+GIE
Sbjct: 241 LGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL
Match: A0A6J1EQH7 (U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.3e-113
Identity = 223/280 (79.64%), Postives = 242/280 (86.43%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS--QVSD-NGSPPPLPPPPLLLLDLPNSI 60
           M+AL ASYGG+S  SDE+ DTV PSSA+A+ S  Q+SD   S  PLPPPPL LLD PNS 
Sbjct: 1   MEALMASYGGSS--SDEDVDTVSPSSASASASLPQLSDETESFLPLPPPPLSLLDFPNS- 60

Query: 61  CIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALH 120
               ALDDLPIGQ++RVRSFPHV+GNYALH+YIPVYI T  RKEVALFLKK+S  VPALH
Sbjct: 61  --TSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKLVPALH 120

Query: 121 LVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWI 180
           LVDIDIPL+ LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKLQ QRRYWI
Sbjct: 121 LVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWI 180

Query: 181 DFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLA 240
           DFSKWETFVNDDLSRTFLSMEI+AGGLMEIRK IQ V+EVYKLHNLPEFYKEGRPHISLA
Sbjct: 181 DFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLA 240

Query: 241 WALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           WALGDLSKLLS++V DEMK S VK   KR +FT KF+GIE
Sbjct: 241 WALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIE 275

[Close]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL
Match: A0A0A0KPH5 (U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.2e-113
Identity = 215/278 (77.34%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAA-AAPSQVSDNGSPPPLPPPPLLLLDLPNSICI 60
           MDALRASYGG+S  SDEE DTV P SA+ +AP  + +  +  PLPPPPL LL+ PNS C+
Sbjct: 1   MDALRASYGGSS--SDEEVDTVSPPSASTSAPQFLDETVTFLPLPPPPLSLLNFPNSTCV 60

Query: 61  APALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLV 120
              LDDLPI Q++RVRSFPHV+GNYALHVYIPVY+PT  RKEVALF+KK+SS VPALHLV
Sbjct: 61  ---LDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPALHLV 120

Query: 121 DIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDF 180
           DIDIPL+ LCKDD KLEQA AREFHISLSRTVPIRVHQIDSIV+ML QKLQ  RRYWIDF
Sbjct: 121 DIDIPLDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYWIDF 180

Query: 181 SKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWA 240
           SKWETFVNDDLSRTFLSMEI+ GGLMEIRKQIQ V+EVYKLHNLPEFYKE RPHIS+AWA
Sbjct: 181 SKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISVAWA 240

Query: 241 LGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           LGD+S+L S+AV +E+K SAVK P KRC+FTTKF+GIE
Sbjct: 241 LGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL
Match: A0A6J1HYN3 (U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.2e-113
Identity = 223/286 (77.97%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPS--------QVSD-NGSPPPLPPPPLLLL 60
           M+AL ASYGG+S  SDE+ADTV PSSA+A+ S        Q+SD   S  PLPPPPL LL
Sbjct: 1   MEALMASYGGSS--SDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLL 60

Query: 61  DLPNSICIAPALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSS 120
           D PNS     ALDDLPIGQ++RVRSFPHV+GNYA+H+YIPVYIPT  RKEVALFLKK+S 
Sbjct: 61  DFPNS---TSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSK 120

Query: 121 RVPALHLVDIDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQF 180
            VPALHLVDIDIPL+ LCKDD KLEQALAREFHISLSRTVPIRVHQIDSIV+ML QKLQ 
Sbjct: 121 LVPALHLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS 180

Query: 181 QRRYWIDFSKWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGR 240
           QRRYWIDFSKWETFVNDDLSRTFLSMEI+AGGLMEIRK+IQ V+EVYKLHNLPEFYKE R
Sbjct: 181 QRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEAR 240

Query: 241 PHISLAWALGDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           PHISLAWALGDLSKLLS++V DEMK S VK   KRC+FT KF+GIE
Sbjct: 241 PHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIE 281

[Close]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL
Match: A0A6J1DNL4 (U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.8e-112
Identity = 220/277 (79.42%), Postives = 236/277 (85.20%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSICIA 60
           MDAL+ASY G+S  SDEE D V     + APS +S    PP LPPPPL LLD PNSI   
Sbjct: 1   MDALKASYRGSS--SDEEDDIV-----STAPSDLSPPPPPPSLPPPPLSLLDFPNSI--- 60

Query: 61  PALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVD 120
            AL DLPI Q +R RSFPHVEGNYALHVYIPVYIPTT++KEV LFLKKVSS VP+LHLVD
Sbjct: 61  SALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVD 120

Query: 121 IDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFS 180
           ID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIVSML QKLQ QRRYWIDFS
Sbjct: 121 IDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFS 180

Query: 181 KWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWAL 240
           KWETFVNDDLSRTFLSMEI+AGGLMEIRKQIQ V+EVYK HNLPEFYKE RPHISLAWAL
Sbjct: 181 KWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWAL 240

Query: 241 GDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           GDLSKLLSR V D+MK S++ AP KRC+FTTKFSGIE
Sbjct: 241 GDLSKLLSRVVDDKMKRSSM-APSKRCIFTTKFSGIE 266

[Close]

BLAST of Sgr024577.1 vs. TAIR 10
Match: AT5G51170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 305.4 bits (781), Expect = 4.5e-83
Identity = 164/277 (59.21%), Postives = 198/277 (71.48%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSICIA 60
           M+ALRASYG +SS SD   D + P+S   A S   D+ S   LPPPPL LLD   SI   
Sbjct: 1   MEALRASYGDSSSDSD--TDDLSPASPVTANSGEKDSIS---LPPPPLALLD---SIVST 60

Query: 61  PALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVD 120
            +LD        RVR+FPHV+GNYALHVY+PV IP   +KE+  FLKKV+S VP LHLV+
Sbjct: 61  GSLDFFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVE 120

Query: 121 IDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFS 180
            D+PL+ LCKDD K E+AL REFHISL R VP+RVHQI+S++SML QKLQ Q+RY IDF+
Sbjct: 121 ADVPLSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFN 180

Query: 181 KWETFVNDDLSRTFLSMEIVAGGLMEIRKQIQAVDEVYKLHNLPEFYKEGRPHISLAWAL 240
           KWE FVNDD +R+FLS+EI   GL EI KQI AV+EVYKLHNLPEFYK+ RPHISL WAL
Sbjct: 181 KWEVFVNDDHTRSFLSLEITTSGLSEISKQIDAVNEVYKLHNLPEFYKDPRPHISLVWAL 240

Query: 241 GDLSKLLSRAVGDEMKWSAVKAPLKRCMFTTKFSGIE 278
           GD+   L  AV  E++       ++  +FT+KF GIE
Sbjct: 241 GDIRTSLKGAVDVELRKLRAGGCVQNRIFTSKFCGIE 269

[Close]

BLAST of Sgr024577.1 vs. TAIR 10
Match: AT5G51170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-59
Identity = 123/211 (58.29%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MDALRASYGGTSSGSDEEADTVYPSSAAAAPSQVSDNGSPPPLPPPPLLLLDLPNSICIA 60
           M+ALRASYG +SS SD   D + P+S   A S   D+ S   LPPPPL LLD   SI   
Sbjct: 1   MEALRASYGDSSSDSD--TDDLSPASPVTANSGEKDSIS---LPPPPLALLD---SIVST 60

Query: 61  PALDDLPIGQSSRVRSFPHVEGNYALHVYIPVYIPTTTRKEVALFLKKVSSRVPALHLVD 120
            +LD        RVR+FPHV+GNYALHVY+PV IP   +KE+  FLKKV+S VP LHLV+
Sbjct: 61  GSLDFFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHLHLVE 120

Query: 121 IDIPLNFLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLCQKLQFQRRYWIDFS 180
            D+PL+ LCKDD K E+AL REFHISL R VP+RVHQI+S++SML QKLQ Q+RY IDF+
Sbjct: 121 ADVPLSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFN 180

Query: 181 KWETFVNDDLSRTFLSMEIVAGGLMEIRKQI 212
           KWE FVNDD +R+FLS+EI   GL E+  ++
Sbjct: 181 KWEVFVNDDHTRSFLSLEITTSGLSEVLSKL 203

The following BLAST results are available for this feature:

BLAST of Sgr024577.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467330.1	2.5e-115	78.78	PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]	[more]
XP_023549871.1	2.1e-114	79.43	U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]	[more]
XP_038875355.1	3.9e-113	79.64	U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida]	[more]
XP_038875354.1	3.9e-113	79.64	U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]	[more]
KAG6579639.1	6.7e-113	77.78	U6 snRNA phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sgr024577.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91W78	1.4e-17	29.88	U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1	[more]
Q6DEF6	5.5e-17	35.56	U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1	[more]
Q5I0I5	1.4e-15	28.57	U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1	[more]
Q0II50	6.7e-15	29.58	U6 snRNA phosphodiesterase OS=Bos taurus OX=9913 GN=USB1 PE=2 SV=1	[more]
Q7ZYI9	1.3e-13	29.06	U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1	[more]

BLAST of Sgr024577.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CTB0	1.2e-115	78.78	U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1	[more]
A0A6J1EQH7	3.3e-113	79.64	U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV...	[more]
A0A0A0KPH5	4.2e-113	77.34	U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1	[more]
A0A6J1HYN3	7.2e-113	77.97	U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1	[more]
A0A6J1DNL4	2.8e-112	79.42	U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 S...	[more]

BLAST of Sgr024577.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51170.1	4.5e-83	59.21	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]
AT5G51170.2	2.0e-59	58.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 76..277 e-value: 4.7E-48 score: 165.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..36
IPR027521	U6 snRNA phosphodiesterase Usb1	PFAM	PF09749	HVSL	coord: 44..261 e-value: 6.3E-50 score: 169.8
IPR027521	U6 snRNA phosphodiesterase Usb1	PANTHER	PTHR13522	UNCHARACTERIZED	coord: 1..277
IPR027521	U6 snRNA phosphodiesterase Usb1	HAMAP	MF_03040	USB1	coord: 3..274 score: 25.728222

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr024577	Sgr024577	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr024577.1.exon1	Sgr024577.1.exon1	exon
Sgr024577.1.exon2	Sgr024577.1.exon2	exon
Sgr024577.1.exon3	Sgr024577.1.exon3	exon
Sgr024577.1.exon4	Sgr024577.1.exon4	exon
Sgr024577.1.exon5	Sgr024577.1.exon5	exon
Sgr024577.1.exon6	Sgr024577.1.exon6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr024577.1	cds.Sgr024577.1	CDS
cds.Sgr024577.1	cds.Sgr024577.1_2	CDS
cds.Sgr024577.1	cds.Sgr024577.1_3	CDS
cds.Sgr024577.1	cds.Sgr024577.1_4	CDS
cds.Sgr024577.1	cds.Sgr024577.1_5	CDS
cds.Sgr024577.1	cds.Sgr024577.1_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr024577.1	Sgr024577.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034477	U6 snRNA 3'-end processing
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:1990838	poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends