Sgr020127.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020127.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	VQ domain-containing protein
Location	tig00153447: 750342 .. 750587 (-)
Sequence length	246
RNA-Seq Expression	Sgr020127.1
Synteny	Sgr020127.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTGGAGAAGCTCATTCGACTAGGGTTGTGATTATTGACACCAAGTATGTGCAGACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGGAAAGATCCGGTGGCGGCGGCGACGGAGGAGAACCGACATACCAGCGGCCGGAGCTCGGGTCTTATGAGAGATTCATCATTCAAGGAGTTCCAGAGAGTGCTGCGAGAGATGCCAAGAATCGATGAGATTTATTCTGATTGA

mRNA sequence

ATGTCAGGTGGAGAAGCTCATTCGACTAGGGTTGTGATTATTGACACCAAGTATGTGCAGACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGGAAAGATCCGGTGGCGGCGGCGACGGAGGAGAACCGACATACCAGCGGCCGGAGCTCGGGTCTTATGAGAGATTCATCATTCAAGGAGTTCCAGAGAGTGCTGCGAGAGATGCCAAGAATCGATGAGATTTATTCTGATTGA

Coding sequence (CDS)

ATGTCAGGTGGAGAAGCTCATTCGACTAGGGTTGTGATTATTGACACCAAGTATGTGCAGACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGGAAAGATCCGGTGGCGGCGGCGACGGAGGAGAACCGACATACCAGCGGCCGGAGCTCGGGTCTTATGAGAGATTCATCATTCAAGGAGTTCCAGAGAGTGCTGCGAGAGATGCCAAGAATCGATGAGATTTATTCTGATTGA

Protein sequence

MSGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSGRSSGLMRDSSFKEFQRVLREMPRIDEIYSD

Homology

[Close]

BLAST of Sgr020127.1 vs. NCBI nr
Match: XP_038889427.1 (VQ motif-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 6  AHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG-RSSGLMRDSSFKE 65
          AHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKD V  A EENRHT G R+SGL+RDSSFKE
Sbjct: 4  AHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSV--AEEENRHTGGTRNSGLLRDSSFKE 63

Query: 66 FQRVLREMPRIDEIYSD 82
          FQRVLREMPRIDE+YSD
Sbjct: 64 FQRVLREMPRIDELYSD 78

[Close]

BLAST of Sgr020127.1 vs. NCBI nr
Match: KGN53544.1 (hypothetical protein Csa_014778 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 5.5e-23
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 7  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMRDSSFKE 66
          HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKD V    EE R  +G  R+S L+RDSSFKE
Sbjct: 5  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSARNSSLLRDSSFKE 64

Query: 67 FQRVLREMPRIDEIYSD 82
          FQRVLREMPRIDE+YSD
Sbjct: 65 FQRVLREMPRIDELYSD 81

[Close]

BLAST of Sgr020127.1 vs. NCBI nr
Match: KAA0063001.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK16346.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 7.1e-23
Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 7  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMRDSSFKE 66
          HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKD V A  EE R  +G  R+S L+RDSSFKE
Sbjct: 5  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVAVGEEIRRQTGSARNSSLLRDSSFKE 64

Query: 67 FQRVLREMPRIDEIYSD 82
          FQRVLREMPRIDE+YSD
Sbjct: 65 FQRVLREMPRIDELYSD 81

[Close]

BLAST of Sgr020127.1 vs. NCBI nr
Match: KAG6577059.1 (VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015070.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-21
Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 6  AHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG-RSSGLMRDSSFKE 65
          A+STRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVA   EENRH  G R+S L+RDSSFKE
Sbjct: 3  AYSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVA---EENRHGDGARNSSLLRDSSFKE 62

Query: 66 FQRVLREMPRID 77
          FQRVLREMPRID
Sbjct: 63 FQRVLREMPRID 71

[Close]

BLAST of Sgr020127.1 vs. NCBI nr
Match: XP_022142787.1 (VQ motif-containing protein 10-like [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19
Identity = 59/76 (77.63%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MSGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMR 60
          M+GGEA STRVVIIDTKYV TDAKSFKTVVQKLTGKDP AAA E+ R   G   SS L R
Sbjct: 1  MAGGEAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLTR 60

Query: 61 DSSFKEFQRVLREMPR 75
          DSSFKEFQRVLREM +
Sbjct: 61 DSSFKEFQRVLREMAK 76

[Close]

BLAST of Sgr020127.1 vs. ExPASy Swiss-Prot
Match: Q8VYI5 (VQ motif-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=VQ10 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-08
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 10  RVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAA--------------------TEENRHT 69
           +VV I+T+YV+TDA+SFKTVVQ+LTGK+ + AA                     E+ R  
Sbjct: 13  KVVFINTQYVETDARSFKTVVQELTGKNAIVAAGPFDSPSAFDGRCYDGGSKIGEDTRQL 72

Query: 70  SGRSSGLMRDSSFKEFQRVLREMPRIDEIY 80
            G   G  R  +  EF R+ +EMP ++E+Y
Sbjct: 73  HGGGGGGGRMGTTTEFDRLFKEMPHMEELY 102

[Close]

BLAST of Sgr020127.1 vs. ExPASy Swiss-Prot
Match: Q1G3U8 (VQ motif-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=VQ1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-07
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 2  SGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAA------------ATEENRHT 61
          +G  +   +VV I+T+YVQTDA+SFKT+VQ+LTGK+ V A              + ++  
Sbjct: 3  AGVRSEPMKVVFINTQYVQTDARSFKTIVQELTGKNAVVADGPYEFSGQGYGGKDSSQRF 62

Query: 62 SGRSSGLMRDSSFKEFQRVLREMPRIDEIYS 81
           G      R     EF    REMP + E+Y+
Sbjct: 63 CGVGKEAERGVETTEFDSFFREMPPVGELYN 93

[Close]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL
Match: A0A0A0KXJ0 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G075740 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 7  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMRDSSFKE 66
          HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKD V    EE R  +G  R+S L+RDSSFKE
Sbjct: 5  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSARNSSLLRDSSFKE 64

Query: 67 FQRVLREMPRIDEIYSD 82
          FQRVLREMPRIDE+YSD
Sbjct: 65 FQRVLREMPRIDELYSD 81

[Close]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL
Match: A0A5A7VBD1 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001280 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-23
Identity = 63/77 (81.82%), Postives = 67/77 (87.01%), Query Frame = 0


Query: 7  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMRDSSFKE 66
          HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKD V A  EE R  +G  R+S L+RDSSFKE
Sbjct: 5  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVAVGEEIRRQTGSARNSSLLRDSSFKE 64

Query: 67 FQRVLREMPRIDEIYSD 82
          FQRVLREMPRIDE+YSD
Sbjct: 65 FQRVLREMPRIDELYSD 81

[Close]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL
Match: A0A6J1CNV7 (VQ motif-containing protein 10-like OS=Momordica charantia OX=3673 GN=LOC111012826 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.0e-20
Identity = 59/76 (77.63%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1  MSGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSG--RSSGLMR 60
          M+GGEA STRVVIIDTKYV TDAKSFKTVVQKLTGKDP AAA E+ R   G   SS L R
Sbjct: 1  MAGGEAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLTR 60

Query: 61 DSSFKEFQRVLREMPR 75
          DSSFKEFQRVLREM +
Sbjct: 61 DSSFKEFQRVLREMAK 76

[Close]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL
Match: A0A6J1FVF7 (VQ motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447218 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 62/77 (80.52%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MSGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAATEENRHTSGR-SSGL-MR 60
          MSGGEAHSTRVVIIDTKYV TDAKSFKTVVQKLTGKDP   A EENR TSG  SSGL + 
Sbjct: 1  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP---AVEENRQTSGGWSSGLVIT 60

Query: 61 DSSFKEFQRVLREMPRI 76
          DSSFK+FQ  LREMP I
Sbjct: 61 DSSFKKFQTELREMPTI 74

[Close]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL
Match: A0A3Q0EY25 (VQ motif-containing protein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760578 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 10 RVVIIDTKYVQTDAKSFKTVVQKLTGK--DPVAAATEENRHTSG--RSSGLMRDSSFKEF 69
          +VVII+T+YVQTDA SFK+VVQKLTGK  D   A  + NRH  G  + S LMRD SFKEF
Sbjct: 12 KVVIINTQYVQTDATSFKSVVQKLTGKDSDTYGAKVDRNRHDKGGTKRSFLMRDVSFKEF 71

Query: 70 QRVLREMPRIDEI 79
           R+LREMP I+++
Sbjct: 72 DRLLREMPPINDL 84

[Close]

BLAST of Sgr020127.1 vs. TAIR 10
Match: AT1G78410.1 (VQ motif-containing protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 10  RVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAAA--------------------TEENRHT 69
           +VV I+T+YV+TDA+SFKTVVQ+LTGK+ + AA                     E+ R  
Sbjct: 13  KVVFINTQYVETDARSFKTVVQELTGKNAIVAAGPFDSPSAFDGRCYDGGSKIGEDTRQL 72

Query: 70  SGRSSGLMRDSSFKEFQRVLREMPRIDEIY 80
            G   G  R  +  EF R+ +EMP ++E+Y
Sbjct: 73  HGGGGGGGRMGTTTEFDRLFKEMPHMEELY 102

[Close]

BLAST of Sgr020127.1 vs. TAIR 10
Match: AT1G17147.1 (VQ motif-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 2  SGGEAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAA------------ATEENRHT 61
          +G  +   +VV I+T+YVQTDA+SFKT+VQ+LTGK+ V A              + ++  
Sbjct: 3  AGVRSEPMKVVFINTQYVQTDARSFKTIVQELTGKNAVVADGPYEFSGQGYGGKDSSQRF 62

Query: 62 SGRSSGLMRDSSFKEFQRVLREMPRIDEIYS 81
           G      R     EF    REMP + E+Y+
Sbjct: 63 CGVGKEAERGVETTEFDSFFREMPPVGELYN 93

The following BLAST results are available for this feature:

BLAST of Sgr020127.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889427.1	2.0e-25	88.31	VQ motif-containing protein 1-like [Benincasa hispida]	[more]
KGN53544.1	5.5e-23	80.52	hypothetical protein Csa_014778 [Cucumis sativus]	[more]
KAA0063001.1	7.1e-23	81.82	VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK16346.1 VQ mot...	[more]
KAG6577059.1	2.3e-21	86.11	VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022142787.1	1.6e-19	77.63	VQ motif-containing protein 10-like [Momordica charantia]	[more]

BLAST of Sgr020127.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI5	2.3e-08	38.89	VQ motif-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=VQ10 PE=1 SV=1	[more]
Q1G3U8	4.4e-07	36.26	VQ motif-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=VQ1 PE=1 SV=1	[more]

BLAST of Sgr020127.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXJ0	2.6e-23	80.52	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G075740 PE=4 SV=...	[more]
A0A5A7VBD1	3.5e-23	81.82	VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CNV7	8.0e-20	77.63	VQ motif-containing protein 10-like OS=Momordica charantia OX=3673 GN=LOC1110128...	[more]
A0A6J1FVF7	1.8e-19	80.52	VQ motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447218 PE=4...	[more]
A0A3Q0EY25	1.0e-11	61.64	VQ motif-containing protein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760...	[more]

BLAST of Sgr020127.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78410.1	1.6e-09	38.89	VQ motif-containing protein	[more]
AT1G17147.1	3.1e-08	36.26	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 13..38 e-value: 5.9E-11 score: 41.7
None	No IPR available	PANTHER	PTHR34777:SF1	VQ MOTIF-CONTAINING PROTEIN 10	coord: 5..79
IPR039608	VQ motif-containing protein 1/10	PANTHER	PTHR34777	VQ MOTIF-CONTAINING PROTEIN 10	coord: 5..79

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr020127	Sgr020127	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr020127.1.exon1	Sgr020127.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr020127.1	cds.Sgr020127.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr020127.1	Sgr020127.1-protein	polypeptide