Sgr019617.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview
NameSgr019617.1
TypemRNA
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionp55
Locationtig00153349: 393414 .. 394034 (+)
Sequence length621
RNA-Seq ExpressionSgr019617.1
SyntenySgr019617.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGACTACCACCAAGTTATCAGCACTGCACTCTATTCTCCCCCATCATCACCCTCTGAAAGGAAAGACCGACCACGCAAGAGAAAGTACTCCAACTACGCGCCGGTGACGCCGGAGATAGACGGTCCGACTGGACAGCTGAAACGGAAGCAAGCTAGCCCACCTTCTCCGAGACAATCTGGTAGTAAGAGGCCGGCGCCGGGACCCAGCGACGACAATTCCCCACATCAGCCGCCAACCCGAAGGCTACGAATCGATCCCTCCTCTAGTTTGAACTCGGTCTCAAACCCGGACCAGGTGGAGGATGGTAACAAGCTGGAGTCTGCCGACGGAGGCTCGAGCTCGCTCCCGTTGGATGTTTGGATAGTCAACATGGACCATATGCTTAAGATGCTAAGAAGGGTCCGCGCCATGAACGCCGATGGTTGCTCACGTGAGTTCAACTTCATGAGTGATCCTGTGTTGGCATGCCTCGTGTCTGCGCAGACTATGATGATGGCCTGCACCGCCGACCTCATCTTCAGGAGAGCAGCGGATCCGCAATGTAAAGGTCCTCCTAACAAAGCTAATGAGGCAGTTGGAGACGAAACTCAAGCCAAACCATCAACTCACTACTGA

mRNA sequence

ATGGGCGACTACCACCAAGTTATCAGCACTGCACTCTATTCTCCCCCATCATCACCCTCTGAAAGGAAAGACCGACCACGCAAGAGAAAGTACTCCAACTACGCGCCGGTGACGCCGGAGATAGACGGTCCGACTGGACAGCTGAAACGGAAGCAAGCTAGCCCACCTTCTCCGAGACAATCTGGTAGTAAGAGGCCGGCGCCGGGACCCAGCGACGACAATTCCCCACATCAGCCGCCAACCCGAAGGCTACGAATCGATCCCTCCTCTAGTTTGAACTCGGTCTCAAACCCGGACCAGGTGGAGGATGGTAACAAGCTGGAGTCTGCCGACGGAGGCTCGAGCTCGCTCCCGTTGGATGTTTGGATAGTCAACATGGACCATATGCTTAAGATGCTAAGAAGGGTCCGCGCCATGAACGCCGATGGTTGCTCACGTGAGTTCAACTTCATGAGTGATCCTGTGTTGGCATGCCTCGTGTCTGCGCAGACTATGATGATGGCCTGCACCGCCGACCTCATCTTCAGGAGAGCAGCGGATCCGCAATGTAAAGGTCCTCCTAACAAAGCTAATGAGGCAGTTGGAGACGAAACTCAAGCCAAACCATCAACTCACTACTGA

Coding sequence (CDS)

ATGGGCGACTACCACCAAGTTATCAGCACTGCACTCTATTCTCCCCCATCATCACCCTCTGAAAGGAAAGACCGACCACGCAAGAGAAAGTACTCCAACTACGCGCCGGTGACGCCGGAGATAGACGGTCCGACTGGACAGCTGAAACGGAAGCAAGCTAGCCCACCTTCTCCGAGACAATCTGGTAGTAAGAGGCCGGCGCCGGGACCCAGCGACGACAATTCCCCACATCAGCCGCCAACCCGAAGGCTACGAATCGATCCCTCCTCTAGTTTGAACTCGGTCTCAAACCCGGACCAGGTGGAGGATGGTAACAAGCTGGAGTCTGCCGACGGAGGCTCGAGCTCGCTCCCGTTGGATGTTTGGATAGTCAACATGGACCATATGCTTAAGATGCTAAGAAGGGTCCGCGCCATGAACGCCGATGGTTGCTCACGTGAGTTCAACTTCATGAGTGATCCTGTGTTGGCATGCCTCGTGTCTGCGCAGACTATGATGATGGCCTGCACCGCCGACCTCATCTTCAGGAGAGCAGCGGATCCGCAATGTAAAGGTCCTCCTAACAAAGCTAATGAGGCAGTTGGAGACGAAACTCAAGCCAAACCATCAACTCACTACTGA

Protein sequence

MGDYHQVISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQSGSKRPAPGPSDDNSPHQPPTRRLRIDPSSSLNSVSNPDQVEDGNKLESADGGSSSLPLDVWIVNMDHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFRRAADPQCKGPPNKANEAVGDETQAKPSTHY
Homology
BLAST of Sgr019617.1 vs. NCBI nr
Match: KAG6584107.1 (hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.0 bits (193), Expect = 5.5e-11
Identity = 71/197 (36.04%), Postives = 83/197 (42.13%), Query Frame = 0

Query: 1   MGDYHQVISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQ 60
           MG    VIS  ++S P SP    D       S   PVTP + G                 
Sbjct: 1   MGGDSSVISEIIFSAPRSPRPSTDSKETEPISPPNPVTPNLRG----------------- 60

Query: 61  SGSKRPAPGPSDDNSPHQPPTRRLRIDPSSSLNSVSNPDQVEDGNKLE-SADGGSSSLPL 120
              KR AP P   N  H+PPT+R R                 DGNKLE   D   SS+PL
Sbjct: 61  -SRKRSAPSPM-SNPEHEPPTQRRR--------------DSGDGNKLEYGEDADWSSIPL 120

Query: 121 DVWIVNMDHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFRRAA 180
              I NM+ ++K L+RV              M DP+L CLVS+QT MM C A LI R   
Sbjct: 121 ARLIGNMEEVVKSLKRVGGQE--------GLMIDPLLGCLVSSQTSMMLCLAHLISRTPP 156

Query: 181 DP--QCKGPPNKANEAV 195
            P  Q KG P   N AV
Sbjct: 181 PPGQQRKGCPTSTNRAV 156

BLAST of Sgr019617.1 vs. NCBI nr
Match: KAA0056836.1 (p55 [Cucumis melo var. makuwa] >TYJ99337.1 p55 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07
Identity = 59/187 (31.55%), Postives = 87/187 (46.52%), Query Frame = 0

Query: 2   GDYHQVISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQS 61
           G+++ VI  A+++PP SP  RK+ P+  + S+  P TP+                     
Sbjct: 3   GEFNHVIHHAIFNPPLSPG-RKNAPKVTESSSVEPHTPD------------------AVL 62

Query: 62  GSKRPAPGPSDDNSPH-QPPTRRLRIDPSSSLNSVSNPDQVEDGNKLESADGGSSSLPLD 121
           G KRPA    +D S H  PPT++ + D                     +    SS +P+ 
Sbjct: 63  GKKRPASVSPNDVSEHDHPPTQKPKTD--------------------NAEKASSSGVPMK 122

Query: 122 VWIVNMDHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFRRAAD 181
             I  ++ MLKML+RV   N          +SDP+LAC VSAQT++MACTA+L+ +    
Sbjct: 123 DLIGKVEDMLKMLKRVVRKND-------KLVSDPLLACFVSAQTLLMACTAELLSKSTGK 140

Query: 182 PQCKGPP 188
              K PP
Sbjct: 183 ---KKPP 140

BLAST of Sgr019617.1 vs. NCBI nr
Match: KGN64496.1 (hypothetical protein Csa_013860 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-07
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 0

Query: 8   ISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQSGSKRPA 67
           ++  +++PPSSPS +K+ P+    S+  P TP+                     G KRPA
Sbjct: 7   LAHGIFNPPSSPS-KKNTPKFPGRSSVEPQTPD------------------PVHGKKRPA 66

Query: 68  P-GPSDDNSPHQPPTRRLRIDPSSSLNSVSNPDQVEDGNKLESADGGSSSLPLDVWIVNM 127
           P  P+DD    +PPT++ + D                     + +G SS +P+   I  +
Sbjct: 67  PVSPNDDFQHDRPPTQKRKTD--------------------NAEEGSSSDVPMKDLIEKV 126

Query: 128 DHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFR--RAADP 182
           + M+KML+RV         ++   +SDP+LAC VSAQ ++ ACTA+LI R  R A P
Sbjct: 127 EDMVKMLKRVG-------RKKDKLVSDPLLACFVSAQALLTACTAELISRSTRKAKP 137

BLAST of Sgr019617.1 vs. ExPASy TrEMBL
Match: A0A5D3BJN2 (p55 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005530 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.0e-08
Identity = 59/187 (31.55%), Postives = 87/187 (46.52%), Query Frame = 0

Query: 2   GDYHQVISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQS 61
           G+++ VI  A+++PP SP  RK+ P+  + S+  P TP+                     
Sbjct: 3   GEFNHVIHHAIFNPPLSPG-RKNAPKVTESSSVEPHTPD------------------AVL 62

Query: 62  GSKRPAPGPSDDNSPH-QPPTRRLRIDPSSSLNSVSNPDQVEDGNKLESADGGSSSLPLD 121
           G KRPA    +D S H  PPT++ + D                     +    SS +P+ 
Sbjct: 63  GKKRPASVSPNDVSEHDHPPTQKPKTD--------------------NAEKASSSGVPMK 122

Query: 122 VWIVNMDHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFRRAAD 181
             I  ++ MLKML+RV   N          +SDP+LAC VSAQT++MACTA+L+ +    
Sbjct: 123 DLIGKVEDMLKMLKRVVRKND-------KLVSDPLLACFVSAQTLLMACTAELLSKSTGK 140

Query: 182 PQCKGPP 188
              K PP
Sbjct: 183 ---KKPP 140

BLAST of Sgr019617.1 vs. ExPASy TrEMBL
Match: A0A0A0LX14 (p55 OS=Cucumis sativus OX=3659 GN=Csa_1G059750 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-07
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 0

Query: 8   ISTALYSPPSSPSERKDRPRKRKYSNYAPVTPEIDGPTGQLKRKQASPPSPRQSGSKRPA 67
           ++  +++PPSSPS +K+ P+    S+  P TP+                     G KRPA
Sbjct: 7   LAHGIFNPPSSPS-KKNTPKFPGRSSVEPQTPD------------------PVHGKKRPA 66

Query: 68  P-GPSDDNSPHQPPTRRLRIDPSSSLNSVSNPDQVEDGNKLESADGGSSSLPLDVWIVNM 127
           P  P+DD    +PPT++ + D                     + +G SS +P+   I  +
Sbjct: 67  PVSPNDDFQHDRPPTQKRKTD--------------------NAEEGSSSDVPMKDLIEKV 126

Query: 128 DHMLKMLRRVRAMNADGCSREFNFMSDPVLACLVSAQTMMMACTADLIFR--RAADP 182
           + M+KML+RV         ++   +SDP+LAC VSAQ ++ ACTA+LI R  R A P
Sbjct: 127 EDMVKMLKRVG-------RKKDKLVSDPLLACFVSAQALLTACTAELISRSTRKAKP 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6584107.15.5e-1136.04hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0056836.11.6e-0731.55p55 [Cucumis melo var. makuwa] >TYJ99337.1 p55 [Cucumis melo var. makuwa][more]
KGN64496.14.8e-0731.64hypothetical protein Csa_013860 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJN28.0e-0831.55p55 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005530 PE=4 SV=1[more]
A0A0A0LX142.3e-0731.64p55 OS=Cucumis sativus OX=3659 GN=Csa_1G059750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..103

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sgr019617Sgr019617gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sgr019617.1.exon1Sgr019617.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Sgr019617.1cds.Sgr019617.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sgr019617.1Sgr019617.1-proteinpolypeptide