Sgr018216.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018216.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	mediator of RNA polymerase II transcription subunit 27
Location	tig00153145: 274995 .. 278059 (+)
Sequence length	1272
RNA-Seq Expression	Sgr018216.1
Synteny	Sgr018216.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCAGACGCAGCAGCCAGCGCAGGGCCCGACTGCGACGGTGAGCCCTAATACTGCTGCGCCTCATTCCGGCGGCTCTGCAGACGAGGCGCCGCCGAAGCAGGTAGCGCTGGCCATGGATAGACTCGGCCACGCCGCACGCCTCATCGCCGATATTAGGCTCGGCGCCGATCGTCTTCTCGAAGCCTTATGCGTCACTGCACAGCCTCATCAAAGCACCAAGCCTCTGCACTTGTTTCAGAAAGAGGATGCTTCGATGCGGCAACACCTCCAAGACCTTCGTGCAGTTGGTATTTAGCATCAATTCTCTTAGGGTTGCGTTTTCAATTTGAATGCTTAGGGTAAAATCTTATCATTTTAAGACCACAACTAGACAATTTTAGTATCAAATTGTCCATATTGAAGAGGGGGTTTAATTTTTCTGGCAATTTGGATGAGATCATGCAATTGAAATAGGGTGTAACATTAGCAAAACTACAAATATTTTTCTTCTAATTTTGTTAGGAAGGCAGCTTGAAGAGTCTGGCGTTCTCAGTGAATCTCTTCTTTCACGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGCCCTGACGGAGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCCGGTGCATCCGCAGTTGACCGGACCAGGTTGGTTAAGACATTTTGCATATACCCATCCACTAAAATAGCTGCTCTATGGCATAAATACGGAAACCTACTTGAATTTGCAAGTTCACTTGATTTTTCTTCATATTGCTTAAAGCAGTAGCGTGGTAGCATCGATTGCTAAATTAGAGTTCATAAATTTATTTTTTAAAGAAACAGTAGGGATTCCAGGCTTGGCTGATGATGCCAATAAGTTGTGGTTGATATTTAAGGAAGTTCAAGGCTGTAACAGACTGGATAGTGAATTGCAGCAACTTGACTTTGCAGCATTGATATTTAAGGAAATTCTAATAATTCCATCAAGTTTCTTACATACATGTATATAAGATAATTCAATGGTCAATAATAAGAACATGTGTTGTAAGATGGATAGATACCTTGTGGATATGATATTTCATTGTTAATTAATTACCATTAGGCTATGGGCATTGTCGAACAATATAGAAAATTTTTATTTTTTATGATCATTCTCGCGTTGTAACCAGAAAGTAAAGGACCCTGGATTTAATGAAGTGATCATAGTGTTACATTGCTTTTGTCACCTACACAGGGTTTTAATTATTTAACAAATTTTCTAATTCAGAGAGCTGAAGCTTACTAATGATTCACTAATGAATATATTTGTGCTTCTATTATACTGTAGGACAGCTTCAGTTGCCATTGATTGTTATGTCTTTTTGAATTATGACCATGTAGTTGCCTCCTTATATATGATAGACCAGGTCTTGTAAATTTTAATCTCAATTCCATAAGTTCAGGTAGATGTTTTACTGATGCTTGAACATGATGATAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGACGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGAAATTAAACAAGAGGAGCTTTATGAATCTAGAACACTGCCAGATATTCTAACATGTATGGAAAAGGAAGTGCCAGATCTTAAGATTTTCACTTACGAGCGATTAGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATTCCATGGGAGCATTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCTGGATCGCTTGGTGCTACTGCCAAAGATAAAGTTGCTGTAATTGAGTTGATCATCCCTTCTGTCTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGATGAGGTACATTATTTTGCACACAAGTATTTATTGTCAATTTTTTTTTACTCATTTTTCTGTCGTACTGGCAACAAGATAATTCTTTCAATGAGTTGTGTTATTGTCTGACAATGCTAGGGGAGTTTCTTTTCTCCTGATGAGGTACTTTACCTGCCAGTCAAATAGAAAGATTGCTATAGGCAATAACATATGGTCTAGATATTTGCAACCAGTTGATTTATGAAATAGTTGGGGTGGATCTATAGTAATCTGCCATAATTTGTAATGATCTTTACCATGTTCTATTTATAGCATTGATTTTTAACAGAATTGAGAGTAAGGCAAACATAGTTTTCATTACAAATGCAATTAGACTTTCATAATTTATATTTTTTTAAAGCACTATCTCAGCTCCACCTGGTTTTGATTCATTGCACCTTTCCCACTGATTTCTCTTGTAGCTTGAGGACTTAAGTTGGCTACTAGTGCAGTTTATTTAGAATTTTTTTTTGTGTTGCAACAGAGAGGCAGCTATGTACATGCCAGGGGTTTTTCAACTCATCATTTGTTTAGACACGTGACGGTATCTATCACTTTGTTCATTATGTTTACTTTCGTTCAGGAATCTAGAGCTTGCTCTCTCTCAAAGATGATGATTTATTTTCATCTTAATGCAGGAGCATGCTGCCACTGTGCTGCAGTATTTTCTTGGAATTCAAGCAAAAGCAGCTCTATATCCTTTATTGGTAACATCATCCATTGATTTTGTGGACATGCCTTATTCTTTCTTCATTCCATTTAAAATTCTCGTCAATTAATATGTGGTACATTTTTGTAGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGCAGGTGTGTGTAGGGATTTTCTGTGCTTTCATATTTGGTTCTGTGTGGATTTGACATTTTAATGGTACGTTAATCTGGTCTTGCAGTAAATGCGGACGGCTACTATCAGTAAACAAACAGTCAGATTTACTGTTACCTCCTGCAATTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATCGGCTGTGCCCATATCCTCATTGAAAAACCAGCGGTTGGATCCTGTTCAAGCTTTCCACATCGGTTGCTTCTCAGAACTATAG

mRNA sequence

ATGCGCCAGACGCAGCAGCCAGCGCAGGGCCCGACTGCGACGGTGAGCCCTAATACTGCTGCGCCTCATTCCGGCGGCTCTGCAGACGAGGCGCCGCCGAAGCAGGTAGCGCTGGCCATGGATAGACTCGGCCACGCCGCACGCCTCATCGCCGATATTAGGCTCGGCGCCGATCGTCTTCTCGAAGCCTTATGCGTCACTGCACAGCCTCATCAAAGCACCAAGCCTCTGCACTTGTTTCAGAAAGAGGATGCTTCGATGCGGCAACACCTCCAAGACCTTCGTGCAGTTGGAAGGCAGCTTGAAGAGTCTGGCGTTCTCAGTGAATCTCTTCTTTCACGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGCCCTGACGGAGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCCGGTGCATCCGCAGTTGACCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGACGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGAAATTAAACAAGAGGAGCTTTATGAATCTAGAACACTGCCAGATATTCTAACATGTATGGAAAAGGAAGTGCCAGATCTTAAGATTTTCACTTACGAGCGATTAGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATTCCATGGGAGCATTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCTGGATCGCTTGGTGCTACTGCCAAAGATAAAGTTGCTGTAATTGAGTTGATCATCCCTTCTGTCTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGATGAGAGAGGCAGCTATGTACATGCCAGGGGTTTTTCAACTCATCATTTGTTTAGACACGTGACGGAGCATGCTGCCACTGTGCTGCAGTATTTTCTTGGAATTCAAGCAAAAGCAGCTCTATATCCTTTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGCAGTAAATGCGGACGGCTACTATCAGTAAACAAACAGTCAGATTTACTGTTACCTCCTGCAATTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATCGGCTGTGCCCATATCCTCATTGAAAAACCAGCGGTTGGATCCTGTTCAAGCTTTCCACATCGGTTGCTTCTCAGAACTATAG

Coding sequence (CDS)

ATGCGCCAGACGCAGCAGCCAGCGCAGGGCCCGACTGCGACGGTGAGCCCTAATACTGCTGCGCCTCATTCCGGCGGCTCTGCAGACGAGGCGCCGCCGAAGCAGGTAGCGCTGGCCATGGATAGACTCGGCCACGCCGCACGCCTCATCGCCGATATTAGGCTCGGCGCCGATCGTCTTCTCGAAGCCTTATGCGTCACTGCACAGCCTCATCAAAGCACCAAGCCTCTGCACTTGTTTCAGAAAGAGGATGCTTCGATGCGGCAACACCTCCAAGACCTTCGTGCAGTTGGAAGGCAGCTTGAAGAGTCTGGCGTTCTCAGTGAATCTCTTCTTTCACGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGCCCTGACGGAGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCCGGTGCATCCGCAGTTGACCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGACGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGAAGCCTTGTTTTTCTCATGGAGTGACAGAAATTAAACAAGAGGAGCTTTATGAATCTAGAACACTGCCAGATATTCTAACATGTATGGAAAAGGAAGTGCCAGATCTTAAGATTTTCACTTACGAGCGATTAGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATTCCATGGGAGCATTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCTGGATCGCTTGGTGCTACTGCCAAAGATAAAGTTGCTGTAATTGAGTTGATCATCCCTTCTGTCTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGATGAGAGAGGCAGCTATGTACATGCCAGGGGTTTTTCAACTCATCATTTGTTTAGACACGTGACGGAGCATGCTGCCACTGTGCTGCAGTATTTTCTTGGAATTCAAGCAAAAGCAGCTCTATATCCTTTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGCAGTAAATGCGGACGGCTACTATCAGTAAACAAACAGTCAGATTTACTGTTACCTCCTGCAATTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATCGGCTGTGCCCATATCCTCATTGAAAAACCAGCGGTTGGATCCTGTTCAAGCTTTCCACATCGGTTGCTTCTCAGAACTATAG

Protein sequence

MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCFSEL

Homology

[Close]

BLAST of Sgr018216.1 vs. NCBI nr
Match: XP_022151438.1 (mediator of RNA polymerase II transcription subunit 27 [Momordica charantia])

HSP 1 Score: 780.0 bits (2013), Expect = 1.0e-221
Identity = 390/422 (92.42%), Postives = 405/422 (95.97%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQQPAQG TATVSPNTAAPHSGGSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQQPAQGQTATVSPNTAAPHSGGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTA PHQSTKPLHLFQKED SMRQHL+DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAHPHQSTKPLHLFQKEDDSMRQHLRDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDESRLNLEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            LKKPCFSHGVTEIKQ+EL E RTL DILTCMEKEVPDLKIFTYERLDWLKQA AL SQA
Sbjct: 181 ALKKPCFSHGVTEIKQDELNEPRTLSDILTCMEKEVPDLKIFTYERLDWLKQAPALSSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           N+NS+GALKEHNYHSPRM PGSL A++KDKV+VIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NDNSIGALKEHNYHSPRMGPGSLAASSKDKVSVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FF+PDERGSYVHARGFS HHLFRHVTEHAATVLQYFLGIQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFAPDERGSYVHARGFSVHHLFRHVTEHAATVLQYFLGIQEKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTS++ SAVPISSLK+QR DPVQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSRVLSAVPISSLKDQRSDPVQAFHIGCF 420

Query: 421 SE 423
           SE
Sbjct: 421 SE 422

[Close]

BLAST of Sgr018216.1 vs. NCBI nr
Match: XP_022940393.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata])

HSP 1 Score: 768.5 bits (1983), Expect = 3.1e-218
Identity = 385/423 (91.02%), Postives = 403/423 (95.27%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGVT++KQEEL +S +L DILTCMEKEVPDLKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP++SLK+Q+LD VQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGCF 420

Query: 421 SEL 424
           +EL
Sbjct: 421 TEL 423

[Close]

BLAST of Sgr018216.1 vs. NCBI nr
Match: XP_023539656.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 768.5 bits (1983), Expect = 3.1e-218
Identity = 386/423 (91.25%), Postives = 403/423 (95.27%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGVT++KQEEL +S +L DILTC+EKEVPDLKIFTYERLDWLKQASAL SQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCLEKEVPDLKIFTYERLDWLKQASALSSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP++SLK+Q+LD VQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF 420

Query: 421 SEL 424
           +EL
Sbjct: 421 TEL 423

[Close]

BLAST of Sgr018216.1 vs. NCBI nr
Match: XP_023005694.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima])

HSP 1 Score: 766.9 bits (1979), Expect = 9.0e-218
Identity = 384/423 (90.78%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGVT++KQEEL +S +L DILTCMEKEVPDLKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+G LKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP++SLK+Q+LD VQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF 420

Query: 421 SEL 424
           +EL
Sbjct: 421 TEL 423

[Close]

BLAST of Sgr018216.1 vs. NCBI nr
Match: XP_038904949.1 (mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904950.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904951.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904952.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida])

HSP 1 Score: 763.1 bits (1969), Expect = 1.3e-216
Identity = 381/421 (90.50%), Postives = 400/421 (95.01%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQQPAQG TATVSPNTA PHS  SAD+APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            LKKPCFSHGVT++KQ EL +SR+L +ILTCMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+G LKEH+YHSPRMSPGSLGAT  DK  VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYFLG QAKAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS+VPI+SLK+Q+LD VQAFHI CF
Sbjct: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDCF 420

Query: 421 S 422
           S
Sbjct: 421 S 421

[Close]

BLAST of Sgr018216.1 vs. ExPASy Swiss-Prot
Match: Q8RWM3 (Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana OX=3702 GN=MED27 PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 3.1e-128
Identity = 242/402 (60.20%), Postives = 301/402 (74.88%), Query Frame = 0


Query: 18  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
           N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL
Sbjct: 12  NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71

Query: 78  HLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
            LF +EDASMRQHLQDLR +G++LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72  QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131

Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQE 197
           RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + E  +E
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191

Query: 198 ELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPR 257
           E  + +TLPDI + +EK VP +K+ TY RL+WLK+A++LP   +++   A K     S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251

Query: 258 MSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS 317
           +  G L     DK+AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GSY+HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311

Query: 318 THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSD 377
            +H+++H+TEHAAT LQYFLG     ALY LLLWICS++++FSK C+KCGRLL+++K+S 
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371

Query: 378 LLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGC 420
           L+LPP  R Y++         +P++      LD  +A+H  C
Sbjct: 372 LILPPLHRAYQE---------LPLA----LNLDVCEAYHSSC 397

[Close]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL
Match: A0A6J1DC62 (mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX=3673 GN=LOC111019372 PE=3 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 5.0e-222
Identity = 390/422 (92.42%), Postives = 405/422 (95.97%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQQPAQG TATVSPNTAAPHSGGSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQQPAQGQTATVSPNTAAPHSGGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTA PHQSTKPLHLFQKED SMRQHL+DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAHPHQSTKPLHLFQKEDDSMRQHLRDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDESRLNLEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            LKKPCFSHGVTEIKQ+EL E RTL DILTCMEKEVPDLKIFTYERLDWLKQA AL SQA
Sbjct: 181 ALKKPCFSHGVTEIKQDELNEPRTLSDILTCMEKEVPDLKIFTYERLDWLKQAPALSSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           N+NS+GALKEHNYHSPRM PGSL A++KDKV+VIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NDNSIGALKEHNYHSPRMGPGSLAASSKDKVSVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FF+PDERGSYVHARGFS HHLFRHVTEHAATVLQYFLGIQ KAALYPLLLWICSYQNLFS
Sbjct: 301 FFAPDERGSYVHARGFSVHHLFRHVTEHAATVLQYFLGIQEKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTS++ SAVPISSLK+QR DPVQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSRVLSAVPISSLKDQRSDPVQAFHIGCF 420

Query: 421 SE 423
           SE
Sbjct: 421 SE 422

[Close]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL
Match: A0A6J1FP59 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=3662 GN=LOC111446014 PE=3 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 385/423 (91.02%), Postives = 403/423 (95.27%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGVT++KQEEL +S +L DILTCMEKEVPDLKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP++SLK+Q+LD VQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGCF 420

Query: 421 SEL 424
           +EL
Sbjct: 421 TEL 423

[Close]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL
Match: A0A6J1KZZ9 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=3661 GN=LOC111498620 PE=3 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.3e-218
Identity = 384/423 (90.78%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGVT++KQEEL +S +L DILTCMEKEVPDLKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+G LKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP++SLK+Q+LD VQAFHIGCF
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF 420

Query: 421 SEL 424
           +EL
Sbjct: 421 TEL 423

[Close]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL
Match: A0A1S3B7L6 (mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 GN=LOC103486676 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 9.7e-210
Identity = 370/422 (87.68%), Postives = 394/422 (93.36%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR  QQP+QG TATVSPNT   HS  SAD+APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRHIQQPSQGQTATVSPNT---HSPSSADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQS+KPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            LKKPCFSHGVT++KQ EL +SR+L DIL+C+EKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+GALKEH+YHSPRMSPG+LGAT  DK  VIELIIPSVFRAVVSLHP+GSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS +H+FRHVTEHAATVLQYFLG Q KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHVFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGR LSVNKQSDLLLPP +RPYKQFC SK SSAVPI+SLK+Q+LD VQAFHI CF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPVVRPYKQFCASKNSSAVPITSLKDQKLDSVQAFHIDCF 419

Query: 421 SE 423
           SE
Sbjct: 421 SE 419

[Close]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL
Match: A0A0A0LGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 2.8e-209
Identity = 371/422 (87.91%), Postives = 393/422 (93.13%), Query Frame = 0


Query: 1   MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR  QQP+QG TATVSP+T   HS  S D+APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRHIQQPSQGQTATVSPST---HSPPSPDDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQS+KPLHLFQKEDASMRQHL DLRAVG+QLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180

Query: 181 VLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            LKKPCFSHGVT++KQ EL +SR+L DIL+CMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCMEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENS+GALKEH+YHSPRMSPG+LGAT  DK  VIELIIPSVFRAVVSLHPVGSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALA 300

Query: 301 FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFS 360
           FFSPDERGS+VHARGFS +HLFRHVTEHAATVLQYFLG Q KAALYPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCF 420
           KACSKCGR LSVNKQSDLLLPPA+RPYKQFC SK SS VPI+SLK+Q+LD VQAFHI CF
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPAVRPYKQFCASKNSSVVPITSLKDQKLDSVQAFHIDCF 419

Query: 421 SE 423
           SE
Sbjct: 421 SE 419

[Close]

BLAST of Sgr018216.1 vs. TAIR 10
Match: AT3G09180.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 459.9 bits (1182), Expect = 2.2e-129
Identity = 242/402 (60.20%), Postives = 301/402 (74.88%), Query Frame = 0


Query: 18  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
           N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL
Sbjct: 12  NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71

Query: 78  HLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
            LF +EDASMRQHLQDLR +G++LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72  QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131

Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQE 197
           RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + E  +E
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191

Query: 198 ELYESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPR 257
           E  + +TLPDI + +EK VP +K+ TY RL+WLK+A++LP   +++   A K     S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251

Query: 258 MSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS 317
           +  G L     DK+AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GSY+HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311

Query: 318 THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSD 377
            +H+++H+TEHAAT LQYFLG     ALY LLLWICS++++FSK C+KCGRLL+++K+S 
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371

Query: 378 LLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGC 420
           L+LPP  R Y++         +P++      LD  +A+H  C
Sbjct: 372 LILPPLHRAYQE---------LPLA----LNLDVCEAYHSSC 397

The following BLAST results are available for this feature:

BLAST of Sgr018216.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151438.1	1.0e-221	92.42	mediator of RNA polymerase II transcription subunit 27 [Momordica charantia]	[more]
XP_022940393.1	3.1e-218	91.02	mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata]	[more]
XP_023539656.1	3.1e-218	91.25	mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pe...	[more]
XP_023005694.1	9.0e-218	90.78	mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima]	[more]
XP_038904949.1	1.3e-216	90.50	mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_0...	[more]

BLAST of Sgr018216.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWM3	3.1e-128	60.20	Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana O...	[more]

BLAST of Sgr018216.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC62	5.0e-222	92.42	mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX...	[more]
A0A6J1FP59	1.5e-218	91.02	mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=...	[more]
A0A6J1KZZ9	4.3e-218	90.78	mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=36...	[more]
A0A1S3B7L6	9.7e-210	87.68	mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0LGT1	2.8e-209	87.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1	[more]

BLAST of Sgr018216.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09180.1	2.2e-129	60.20	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627);...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021627	Mediator complex, subunit Med27	PFAM	PF11571	Med27	coord: 302..419 e-value: 1.3E-22 score: 80.0
IPR021627	Mediator complex, subunit Med27	PANTHER	PTHR13130	34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED	coord: 21..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR13130:SF5	BNAC03G36240D PROTEIN	coord: 21..391

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr018216	Sgr018216	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr018216.1.exon1	Sgr018216.1.exon1	exon
Sgr018216.1.exon2	Sgr018216.1.exon2	exon
Sgr018216.1.exon3	Sgr018216.1.exon3	exon
Sgr018216.1.exon4	Sgr018216.1.exon4	exon
Sgr018216.1.exon5	Sgr018216.1.exon5	exon
Sgr018216.1.exon6	Sgr018216.1.exon6	exon
Sgr018216.1.exon7	Sgr018216.1.exon7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr018216.1	cds.Sgr018216.1	CDS
cds.Sgr018216.1	cds.Sgr018216.1_2	CDS
cds.Sgr018216.1	cds.Sgr018216.1_3	CDS
cds.Sgr018216.1	cds.Sgr018216.1_4	CDS
cds.Sgr018216.1	cds.Sgr018216.1_5	CDS
cds.Sgr018216.1	cds.Sgr018216.1_6	CDS
cds.Sgr018216.1	cds.Sgr018216.1_7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr018216.1	Sgr018216.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003713	transcription coactivator activity