Sgr015117.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr015117.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	histone H1
Location	tig00002854: 900429 .. 902577 (-)
Sequence length	1212
RNA-Seq Expression	Sgr015117.1
Synteny	Sgr015117.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGAGGACCCGGTCGTGCCGGTCGAGTCTGCTGCAGAGCCGACCGACGCCGAGCCAGCAGAAGAAAGCCCGGCGAACAAGGCTTCCAAGTCGAAGAAGTCTAAAGAACCTAAAGAGAAGAAGCCAGCTGCTCCTAGAAAGCCTAGGAATCCTCCAACTCATCCTCCCTATGAAGAGGTGTGCTACTGAATCTAATTCGGATTTTACAACTGAATTTTCTTTCGTGTCGGTTTTGGTTTCTTCGATCTGTTGTGTTAATTTCGTTTGGTTTTTGGTTTCAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGAACGGGTTCGAGTCAGTATGCGATCACTAAATTTATCGAGGAGAAGCATAAGCAGCTTCCTCCTAACTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAGCTTGTGGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAACCCACGAAGTCGGCGGTTGTGAAACCCGCTTCTCCTGCGAAGAAGAAGCCTGCAGCTGCCAAGCCAAAACCAAAAGCGGCCGCTAAGACTAAAGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCCAAGCCGAAGCCCAAGACGGCAGCCAAGCCCAAGGCTGCTCCTAAACCTAAACCTGCTCCCGCCAAGTCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCAGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGGACATCGACGAGAACTCACCAGGGAAGAAGGCACCAGCCCCGAAACCAGCGGCGAAGAAAGCACCAGCCGCTAAGAAGGCCCCAGCGAAAAGTGTAAAGCCTAAGAAAGTGAAGTCGCCGGCAAAAAAGGCTCCGGCAAAAAGAGGGAAGAAGTAAAGGAGATAGAAGGAACCTAGCATTTGTAGCGGCGGTCCTGTAAATCCGTTATCCGTGTGGGCGTATAGACCCTTACATGCCGTGCTATAGAGGAGTTTATTTGAGACTTTCGAATTTTCTTTTATTTGTTTATTTGTAGACCTTTTTTCCCCCAGATGATGTATCACTCAGCTTAGTTTTTAATGGAAATTCTGTGATCAATTAGGAGCGTCGGTTTCGGTTCTCACCCTGTGATTCTACGGGCAACCCGACTGCATCAATTACCTGGAAATGTTTCGTTTCTCTTACGCTAGAAATGGATATGGATTGCGTACTGAAGTTTGAAGCTTCGTTGCTAAGCGTGGTAAATCTCATCATTCTTGTACTTATCGCCCCAACTTTCTGTTGTGTGGTTCCAATTCGCTAATTTCTGTCTAAACAATGAATTTCAGACGTAGTGTTTGATTAATTAGCTAGCTATATTTGGTGTCTTCTTAGTTGGATTGGTTGGGTGATAGCGATGATCATACGATTTGCTTTGGTTCTTACCTCGATGTTCTTCCCTTGTAGATTGTTGCTTTTTAGGGCGTTGTTTGATTGCCAAGGGATTTCTTTCACGAAGGATGGATTAGGTTTTATATCATGGAATGGAGGTTTATTTGTCCCGTCTGCGTGGGTTTTGGCACCATCCCATTTACATGTATTTACAGAAAGAGAACAGCCCCTTAATCCTAACAATGGCATTCAAATAGTCTCATTTAGAACTACATAAATTGATTGATGAGACTTGTAGCAAAGGTGGCATCATTTTGTGTAGGTTGATCCTTCTGCTGGAATTTGGAAATTTTCAACATCTTAAAATCTTTCTTCATTTTTGTCGGTGGAGTGGAGTGGAGGTGGAGGATAGATTGCTTCCAACCAGAACAACGAAGTTCATCTAGAAATCAGAAGCAATTAAACTTTCCAAGCTTTTATTTGGTCCATTTGCTGCCCAGAAAGTCAGCAGCAATGACGGAATCCACTGGAGCTTCCTTCCATGGTCTGTACTCACAAAGGTGTAAAATGCGAAATGCTAGGAAAGATCTAGATCATTTTTTTATTGCTATTTCTTCAGAAGTTGATGGGATTCTATTACAGTTGGATGACAATGGCTCTTCCCCAGATCAATCGATCACTTGTGTCAAGTGGCTAGGACATGACAAATGCAACTTTGGTGTTTCTTTGGGAAATTTGGGAGGAGAAACATAA

mRNA sequence

ATGGCTACTGAGGACCCGGTCGTGCCGGTCGAGTCTGCTGCAGAGCCGACCGACGCCGAGCCAGCAGAAGAAAGCCCGGCGAACAAGGCTTCCAAGTCGAAGAAGTCTAAAGAACCTAAAGAGAAGAAGCCAGCTGCTCCTAGAAAGCCTAGGAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGAACGGGTTCGAGTCAGTATGCGATCACTAAATTTATCGAGGAGAAGCATAAGCAGCTTCCTCCTAACTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAGCTTGTGGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAACCCACGAAGTCGGCGGTTGTGAAACCCGCTTCTCCTGCGAAGAAGAAGCCTGCAGCTGCCAAGCCAAAACCAAAAGCGGCCGCTAAGACTAAAGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCCAAGCCGAAGCCCAAGACGGCAGCCAAGCCCAAGGCTGCTCCTAAACCTAAACCTGCTCCCGCCAAGTCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCAGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGGACATCGACGAGAACTCACCAGGGAAGAAGGCACCAGCCCCGAAACCAGCGGCGAAGAAAGCACCAGCCGCTAAGAAGGCCCCAGCGAAAAGAGCGTCGGTTTCGGTTCTCACCCTGTGATTCTACGGGCAACCCGACTGCATCAATTACCTGGAAATGTTTCGTTTCTCTTACGCTAGAAATGGATATGGATTGCGTACTGAAGTTTGAAGCTTCGTTGCTAAGCGTGTTGGATTGGTTGGGTGATAGCGATGATCATACGATTTGCTTTGGTTCTTACCTCGATGTTCTTCCCTTAAAGTCAGCAGCAATGACGGAATCCACTGGAGCTTCCTTCCATGGTCTGTACTCACAAAGGTGTAAAATGCGAAATGCTAGGAAAGATCTAGATCATTTTTTTATTGCTATTTCTTCAGAAGTTGATGGGATTCTATTACAGTTGGATGACAATGGCTCTTCCCCAGATCAATCGATCACTTGTGTCAAGTGGCTAGGACATGACAAATGCAACTTTGGTGTTTCTTTGGGAAATTTGGGAGGAGAAACATAA

Coding sequence (CDS)

ATGGCTACTGAGGACCCGGTCGTGCCGGTCGAGTCTGCTGCAGAGCCGACCGACGCCGAGCCAGCAGAAGAAAGCCCGGCGAACAAGGCTTCCAAGTCGAAGAAGTCTAAAGAACCTAAAGAGAAGAAGCCAGCTGCTCCTAGAAAGCCTAGGAATCCTCCAACTCATCCTCCCTATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAGAGAACGGGTTCGAGTCAGTATGCGATCACTAAATTTATCGAGGAGAAGCATAAGCAGCTTCCTCCTAACTTTAAAAAGCTCTTGTTATTCCACTTGAAGAAGCTTGTGGCTTCCGGGAAGTTAGTGAAGGTTAAGAGCTCGTTCAAGCTTAAACCCACGAAGTCGGCGGTTGTGAAACCCGCTTCTCCTGCGAAGAAGAAGCCTGCAGCTGCCAAGCCAAAACCAAAAGCGGCCGCTAAGACTAAAGCTGTGGCTAAATCTCCTGCGAAGCCGAAAGCAGCTGCCAAGCCGAAGCCCAAGACGGCAGCCAAGCCCAAGGCTGCTCCTAAACCTAAACCTGCTCCCGCCAAGTCAAAGAGCAGTGCTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCAGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGTGGCAAGGACATCGACGAGAACTCACCAGGGAAGAAGGCACCAGCCCCGAAACCAGCGGCGAAGAAAGCACCAGCCGCTAAGAAGGCCCCAGCGAAAAGAGCGTCGGTTTCGGTTCTCACCCTGTGATTCTACGGGCAACCCGACTGCATCAATTACCTGGAAATGTTTCGTTTCTCTTACGCTAGAAATGGATATGGATTGCGTACTGAAGTTTGAAGCTTCGTTGCTAAGCGTGTTGGATTGGTTGGGTGATAGCGATGATCATACGATTTGCTTTGGTTCTTACCTCGATGTTCTTCCCTTAAAGTCAGCAGCAATGACGGAATCCACTGGAGCTTCCTTCCATGGTCTGTACTCACAAAGGTGTAAAATGCGAAATGCTAGGAAAGATCTAGATCATTTTTTTATTGCTATTTCTTCAGAAGTTGATGGGATTCTATTACAGTTGGATGACAATGGCTCTTCCCCAGATCAATCGATCACTTGTGTCAAGTGGCTAGGACATGACAAATGCAACTTTGGTGTTTCTTTGGGAAATTTGGGAGGAGAAACATAA

Protein sequence

MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSFKLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRRHQPRNQRRRKHQPLRRPQRKERRFRFSPCDSTGNPTASITWKCFVSLTLEMDMDCVLKFEASLLSVLDWLGDSDDHTICFGSYLDVLPLKSAAMTESTGASFHGLYSQRCKMRNARKDLDHFFIAISSEVDGILLQLDDNGSSPDQSITCVKWLGHDKCNFGVSLGNLGGET

Homology

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BLAST of Sgr015117.1 vs. NCBI nr
Match: XP_022145924.1 (histone H1 [Momordica charantia])

HSP 1 Score: 355.5 bits (911), Expect = 5.9e-94
Identity = 217/231 (93.94%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEK K LP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKP SPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRT  GRR
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRR 231

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BLAST of Sgr015117.1 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 6.8e-90
Identity = 210/231 (90.91%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

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BLAST of Sgr015117.1 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 6.8e-90
Identity = 210/231 (90.91%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

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BLAST of Sgr015117.1 vs. NCBI nr
Match: XP_004140078.1 (histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-88
Identity = 206/231 (89.18%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+PANK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLPPNFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

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BLAST of Sgr015117.1 vs. NCBI nr
Match: KAG7036335.1 (Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 1.6e-86
Identity = 206/231 (89.18%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AEPAEE+PANKA+KSKKSK+PKEKKPAA RK RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLK  KSA+VKPASPA KKPAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
            KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAK +RTSTRT  G++
Sbjct: 181 AKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKK 230

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BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-38
Identity = 151/272 (55.51%), Postives = 169/272 (62.13%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PV+  E   E    E  ++     A   K  KE K KKPAAPRK    PTHPPY 
Sbjct: 1   MATEEPVIVNEVVEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYF 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQ+AITKFIEEK K LP NFKKLLL  LKK VAS KLVKVK+S+
Sbjct: 61  EMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSY 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAK----PKPKAAAKTKAVAKSPAKPKAAAKP------- 180
           KL P+ S     A PAKKKPAAAK     KPKAA K KA   + AKP A AKP       
Sbjct: 121 KL-PSGSKPAAAAVPAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAAKAKPA 180

Query: 181 -KPKTAAKPKAAPKPKP-APAKSKSSAVAKPKAATKTKAAP-------KP--KAKEKPAK 240
            K K AAK K A K KP A AK K++A AKPKAA K KAAP       KP  KAK   AK
Sbjct: 181 AKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTTTAK 240

Query: 241 VARTSTRTHQGRRHQPRNQRRRKHQPLRRPQR 251
           VA+T+TRT   R+  P+    +K    + P +
Sbjct: 241 VAKTATRTTPSRKAAPKATPAKKEPVKKAPAK 271

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BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-38
Identity = 142/262 (54.20%), Postives = 167/262 (63.74%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPA---------EESPANKASKSKKSKEPKEKKPAAPRKPR 60
           MATE+P+V VE+  EP   EP          +E P  +  K+KK+K  K KK +   KPR
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKAS---KPR 60

Query: 61  NPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASG 120
           NP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEK KQLP NFKKLLL +LKK VASG
Sbjct: 61  NPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASG 120

Query: 121 KLVKVKSSFKLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAV-AKSPAKPKAAAKPK 180
           KL+KVK SFKL           S A KKPA AKPK K AAK K+V AK  AKPKA A  K
Sbjct: 121 KLIKVKGSFKL-----------SAAAKKPAVAKPKAKTAAKAKSVKAKPAAKPKAKAVVK 180

Query: 181 PKTAAKPKA-APKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQG 240
           PK A+K KA A KPK A AK K+ A      A K KA  KPK+K KPAKVA+TS +T  G
Sbjct: 181 PKVASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPG 240

Query: 241 RRHQPRNQRRRKHQPLRRPQRK 252
           ++     +   K  P++  + K
Sbjct: 241 KKVAAVKKVAAKKVPVKSVKAK 248

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BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 140/245 (57.14%), Postives = 161/245 (65.71%), Query Frame = 0


Query: 1   MATEDPVVP--VESAAEPTDAEPAEESPANKASKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ E+  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEKHK LPP F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPTKSAVV-KPASPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+   +SA   KPA+P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRT 232
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 238

[Close]

BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot
Match: P26568 (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-28
Identity = 121/226 (53.54%), Postives = 138/226 (61.06%), Query Frame = 0


Query: 12  SAAEPTDAEPAEESPANKASKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  K+K  KE KEKK  AA  K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSFKLKPTKSAVV 131
           KERTGSSQYAI KFIEEK K+LPP F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPASPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
                A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKVARTSTRTHQGRR 232
           P  +         AATK KA   KPKAK +PAK A+T+  T   ++
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKK 233

[Close]

BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26
Identity = 130/259 (50.19%), Postives = 159/259 (61.39%), Query Frame = 0


Query: 3   TEDPVVPVESAAE-PTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYEE 62
           TE P   V++A E P DA  A  + AN A         K KK  AP+K R  PTH PY E
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADANAA---------KAKKATAPKK-RASPTHLPYAE 65

Query: 63  MIKDAIVTLKERTGSSQYAITKFIEEKHK-QLPPNFKKLLLFHLKKLVASGKLVKVKSSF 122
           M+ +AI +LKERTGSS YAI KF+E+KHK +LPPNF+KLL   LKKLVA GKL KVK+S+
Sbjct: 66  MVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSY 125

Query: 123 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 182
           KL        KP + A KKP     KPKAAAK K  AK+PAK K A KPKP  AAKPKA 
Sbjct: 126 KLSSATKPNPKPKA-APKKPKTGAKKPKAAAKPK--AKTPAKAKPATKPKP--AAKPKAV 185

Query: 183 PKPK-PAPAKSKSSAVAKPKAATKTKAAPKPKAKEK-PAKVARTSTRTHQGRRHQPRN-- 242
            KPK PA  K+K +A AKPK A    A PKP AK+   AK A+TS +   G++   +   
Sbjct: 186 VKPKTPAKPKAKPAAKAKPKTA---GAKPKPLAKKAGRAKAAKTSAKDTPGKKAPAKKAA 245

Query: 243 QRRRKHQPLRR-PQRKERR 255
             ++   P+R+ P RK ++
Sbjct: 246 PSKKAATPVRKAPSRKAKK 246

[Close]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL
Match: A0A6J1CWP2 (histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-94
Identity = 217/231 (93.94%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEK K LP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKP SPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRT  GRR
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRR 231

[Close]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 210/231 (90.91%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

[Close]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 210/231 (90.91%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+P NKA+KSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK AP KSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

[Close]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 6.2e-89
Identity = 206/231 (89.18%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AE AEE+PANK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLPPNFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLKP KSAVVKPASPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRT  GR+
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK 231

[Close]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL
Match: A0A6J1ES19 (histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 205/231 (88.74%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MATEDPVVPVESAAEPTDAEPAEESPANKASKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATE+PVVPVESAAEPT+AEPAEE+PANKA+KSKKSK+PKEKKPAA RK RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK KQLP NFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180
           KLK  KSA+VKPASPA K+PAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA
Sbjct: 121 KLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTHQGRR 232
            KPKP  AKSKSS VAKPKAA+KTKAAPKPKAKEKPAK +RTSTRT  G++
Sbjct: 181 AKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKK 230

[Close]

BLAST of Sgr015117.1 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 155.6 bits (392), Expect = 8.4e-38
Identity = 140/245 (57.14%), Postives = 161/245 (65.71%), Query Frame = 0


Query: 1   MATEDPVVP--VESAAEPTDAEPAEESPANKASKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ E+  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEKHK LPP F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPTKSAVV-KPASPAKKK-PAAAKPKPKAA-----AKTKAVAKSPAKPKAAA 180
           KVK+SFK+   +SA   KPA+P KKK    AKPK K A     AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA-APKPKAKEKPAKVARTSTRT 232
             K K  AKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAK +RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 238

[Close]

BLAST of Sgr015117.1 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-29
Identity = 121/226 (53.54%), Postives = 138/226 (61.06%), Query Frame = 0


Query: 12  SAAEPTDAEPAEESPANKASKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  K+K  KE KEKK  AA  K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLVKVKSSFKLKPTKSAVV 131
           KERTGSSQYAI KFIEEK K+LPP F+KLLL +LK+LVASGKLVKVK+SFKL P+ SA  
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-PSASAKA 136

Query: 132 KPASPAKKKPAAAKPKPKAAAKTKA----VAKSPAKPKAAAKPKPKTAAKPKAAPKPKPA 191
                A +K A AK KP   A TKA     A S AK   A KPK   A K  A  K KP 
Sbjct: 137 SSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPV 196

Query: 192 PAKSKSSAVAKPKAATKTKAA-PKPKAKEKPAKVARTSTRTHQGRR 232
           P  +         AATK KA   KPKAK +PAK A+T+  T   ++
Sbjct: 197 PRAT--------AAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKK 233

[Close]

BLAST of Sgr015117.1 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-25
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 1   MATEDPVVP--VESAAEPTDAEPAEESPANKASKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ E+  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEKHK LPP F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPTKSAVV-KPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKT 180
           KVK+SFK+   +SA   KPA+P KKK A    KPKA+    +   SP K  AA   K   
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKK-ATVVAKPKAS--RTSTRTSPGKKVAAPAKKVAV 180

Query: 181 AAKPKAAPKPKPAPAKSKSSAVAK 198
             K  A      +PAK  S+  AK
Sbjct: 181 TKKAPAKSVKVKSPAKRASTRKAK 201

[Close]

BLAST of Sgr015117.1 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 66.6 bits (161), Expect = 5.1e-11
Identity = 68/168 (40.48%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 42  KKPAAPRKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKHKQ-LPPNFKK 101
           KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEKHK  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLVASGKLVKVKSSFKLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAK 161
            L   LK  VA GKLVK+++S+KL  T   + +      KK    + K +   +T++ + 
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSST 127

Query: 162 SPAKPKAAAKPKPKTAAKPKAAPKPKPAPAKSKSSAVAKPKAATKTKA 207
            P K  +  K + K   K    P       KS  S+V K KA   + A
Sbjct: 128 RPKKTVSVNKQEKKRKVKKARQP-------KSIKSSVGKKKAMKASAA 167

[Close]

BLAST of Sgr015117.1 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-06
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKHKQ-LPPNFKKLLLFHLKKLVASGKLVKVKSSF 121
           MIK+A++ LKE+ GSS YAI K IEEKHK  LP +F+K L   LK  VA GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLKPTKSAVVKPASPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 181
           KL  T   + +      KK    + K +   +T++ +  P K  +  K + K   K    
Sbjct: 61  KLSDTTKMITRQQDKKNKKNMKQEDK-EITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQ 120

Query: 182 PKPKPAPAKSKSSAVAKPKAATKTKA 207
           P       KS  S+V K KA   + A
Sbjct: 121 P-------KSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of Sgr015117.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145924.1	5.9e-94	93.94	histone H1 [Momordica charantia]	[more]
XP_008449373.1	6.8e-90	90.91	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	6.8e-90	90.91	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_004140078.1	1.3e-88	89.18	histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumi...	[more]
KAG7036335.1	1.6e-86	89.18	Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sgr015117.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	2.2e-38	55.51	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P08283	4.8e-38	54.20	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P26569	1.2e-36	57.14	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P26568	1.5e-28	53.54	Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1	[more]
P23444	2.5e-26	50.19	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of Sgr015117.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWP2	2.9e-94	93.94	histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1	[more]
A0A5A7UQL0	3.3e-90	90.91	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A1S3BL93	3.3e-90	90.91	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A0A0KDR2	6.2e-89	89.18	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]
A0A6J1ES19	1.7e-86	88.74	histone H1 OS=Cucurbita moschata OX=3662 GN=LOC111437275 PE=3 SV=1	[more]

BLAST of Sgr015117.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	8.4e-38	57.14	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	1.1e-29	53.54	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	2.1e-25	52.94	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	5.1e-11	40.48	histone H1-3	[more]
AT2G18050.2	2.2e-06	38.36	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 172..189 score: 53.09 coord: 42..63 score: 37.37 coord: 142..156 score: 33.33 coord: 69..86 score: 43.21 coord: 194..213 score: 25.0
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 1.2E-34 score: 131.1
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 2.5E-19 score: 69.4
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 31.752892
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..129 e-value: 3.1823E-26 score: 98.8475
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..129 e-value: 7.5E-23 score: 82.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..261
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..245
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..245
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr015117	Sgr015117	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr015117.1.exon5	Sgr015117.1.exon5	exon
Sgr015117.1.exon4	Sgr015117.1.exon4	exon
Sgr015117.1.exon3	Sgr015117.1.exon3	exon
Sgr015117.1.exon2	Sgr015117.1.exon2	exon
Sgr015117.1.exon1	Sgr015117.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr015117.1	cds.Sgr015117.1_5	CDS
cds.Sgr015117.1	cds.Sgr015117.1_4	CDS
cds.Sgr015117.1	cds.Sgr015117.1_3	CDS
cds.Sgr015117.1	cds.Sgr015117.1_2	CDS
cds.Sgr015117.1	cds.Sgr015117.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr015117.1	Sgr015117.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding