Sed0027775.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCCAACAAACAGCCCCCAAGAGTTAGATTAAAAAAAAGACTAAAAAAATAGTTTCCTTTTAATTAAAATTGAGATCCCAAATACCCGAAATTGATCGAAGATCCCAAATACTCCCGATTTGGTCGATCCCTCGAAATTCTCTTGTGAAACTCGCTCGCTCAACAATGGCGGATTACCATTTCGTGTACAAAGACGTGGAAGGAGCCTCCACTCAGTGGGATGATATTCAGGCTAAGCTTGGAAACCTACCTCCAAAGCCTGCTCCCTTCAAGCCTCCAGCCTTCACGCCTGCCCTAGATGAGGCCTCCGTCCCTAAAGACAAGTCTTGGATCGATCACAAAACGGAAGAGGAGCTCGAAGACCTTGAGGATGATCTAGATCTTGACGATGACAACTTCCTCCAAGAGTATAGGTTCGATTTCCTTCTTCTTCTTCTTTTGTCGTTGTTTTTCTGTAATTTTGTTAATCGCTGAGAGAACTCGAAATAGATGCAATTAGAGAAGTGAAACAGAGGTCAGTTGGTGGTGAATCGGTCAATTTCGTTGCGAGGAGAAGATCAAATGATTTTTTTATTTTTATTATTATTATTTTTTTATTTTAAATTTTGAACCTGGAGATCGGAGCTTCACTCCACTATAACCGACATAAACACGTCCATCCCCAGGCTGGGCACCGAGTGACATCAAGGAACGGAGACAATATTGATTGATTTATTAATACAAGGAATTATTATTTTTTCTCCTCGTTTCAATATCTTATTCATTTGCTATTCACCATTTTGTTCATTAGTTAATTAATTACCCGATCTTTATTTTTTCCTATCCAATTGTTTACTTGAAGCCATATCCTTTGAGGTTACTTGACAAAAGAATTGTAGTCTCTGCATTTGTTGCAACCTTATTTTTGGAACAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAGTCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTCATTCTCTACAAAGAAGGGTACCATCCATATCCATGAATGTTTTTTTATGTTCTCTAGATTCTTTTGGCATTTACTTTCTGGTTTTAATATCCATGTTATGTTTTCATTATGATTTCATCATAGAATTCAAGAATGCGATGTGTTGATGAACTGTTTGAAAGAACTGGCCTCGAGATATCCAGCCACAAAGTTTGTTAAAATAATATCCACAGACTGCATTCCGAACTATCCTGATTGTAATCTTCCTACTCTGTTAGTTTACAACAATAGTGCAGTGAAAGCAAATTATGTGGGCCTTCGTAGTTTCGGCAGAAGATGCACGCCAGAAGGTAACTAGATACTAACTAGATAAGAATGCCTTATTTCCTTAGTTTTTGTTCCCTAGAGCATCGTATCTAGTTAGTATTTATTATTTGCATTAATGTTCAACAGTCAACACTTATTTGGTTAGATATTCGAAAGCATGTTATCCTTTGTTATGTTAATGATTTTATCTTGACAAGCTTTGCATTTGAAATTCTGTTATATGGTTGAATTCTAAGCCATAGTACTCCATCTAATGTAGTAAGTTACTTCTGTTGGTTCTGTGACCCTGTGAAGTTGAATTTGTGGGCTTCCTTGGTGGGTTGTGAGGTGAATAATCTTGGTTGCTCTTAACTTATACTTCCTTTGGGCGGTAACTGGTAAGGCAAAGTGTTAGTCTTCTTGGAACCCTTTGGTTGAAAAGGGTTAGAAGCATTTGGGTTCTTGGACAGTTTTTTTTTTAATTTTTATTATAGGAAACATAAACCTTCATTGATGAATGAAAAATTACAAGCCTCTTGAACTGAACAAGGATTTTCTTCTTCAAAGGCTCATCCCATCCATCCTAAGTGGTATCACAAGTTTTTCTTATCTATGTTTAGGACCTTAGGTTGCTGATTTTACGTTTTAGTGAGCAAGGCTTGTGAGAAAATGATGAGGGGGAGGCTCCCATCTGGTAAGCTGGGCTGCGGTTACAAAACCTTTGGCGTGGGAGGTTGGGTATAGGAAACCCAAGACTCACAATGAGGCTTTACTGGAAAAATGGTTATGGCAGTTCTTCTTAGAGCCTAAGGATCTGTGGAACAGGATTATTGTCTGTGGGTATGGGCTTCGACCCTTGGTGTTGGGTGGAGAGCATGGTTTGAAAGGATCTAGTGAAAACTTCTCGATTGCTGTTTCTTAATGTTTTTCTTCTTTTTGCTAGTTTTTTAAATCTTCTGTTGGGGAAGACTCAAAATTTACTTTTGGGAGGATTGGTTGGTTGTGTAATCTGTACTCTGAACCTTATTTCCTCATTTCTGTCATATTCTCAATTCGAAGTTCTACTCGTGGCCGTTTTTTGTTTTTCCTTTTCAGATCCTCTTTCTTAGCTCTCCTTGGACTTTTGTTGGCCTTTATTTGATAGAGAAACCTCAAATGTGTTGGCCTTACTTTCTGTCCTCCATACTATCAGGGAATCCAAGGAAAAAAGTCGCTAGAGTCTGGTATCCTAGTTTGTGGGTTTTTTTTTCCTGTTATTCTTTCTTGTATATTTTGTGTAACCTGAACCCTCCGTAGATGCCTCTAACCTTCTTCTCGCTTTGGCCTTTGGGAAAGTAAAATCTCTTAGAATATCAAATTCTTTGTTTGGCAAAGTTATAATTGGTAGAATTAATACCCTGGACCATAGTAAAATCTCTTAGAATATTAAATTCTTTGTTTGGCAAGTTGTAATTGGTAGAATTAATACCCTGGACCCTAGTTAGAGACGGTCTTCTTTGGTGCATTCTTTGTAGAAGACACAAGGAGGATATCTTTTTTTTTTTGAGGCAAGGGTAACCACGCCTGTCCCTATGTCAGGCACTAGAGACATGGAATGAGTAATGTTATAGGTGAGTCTCGAACGTGGGACCTTGAGGGAGCACATCCTCAAAGCCCAAGTCTTCAACCACTGCGCCACTCCTTGAGGACGACACAAAGAGGATATCAACCACTTGTCTTGGGGTTCTAGTTTTCTCTTGCTCTATAGAGCAAATGCTTGAGTTTGTGGGAGGTTTGTTTCTTTGATGTGTTATGGGGATTTTTTCCTGAATGAAACGGTAGAATTCTTAGGGACATTGAGATAATATGGAGGAGGCTTGGAAGGTTGATAGATTCAACCCATCCTTCTGGACGTCTGTTACCCAACCTTTTTGTAATGAGAGCAATTTAGGTGATGCCTTGACATCACCTAAATATTGAAGCTCACCTATGTGGCTCAATAAGAGCCACATCTTGATTTTTTGTAACCTAAAAAAATAGAAATATGAAATTAAAGAAAATTGAAGTGTGGTTCTCATTAAGCCACATAGGTGGGCATCAATATTTAGGTGATGTCAAGGCATCACCTAAATTACTCTCTTTTATAATTATGAGTTTGGTTTGATTCTTTGAGTTAAAGTCCTTTGTAGTTATTTGGTAGACTCCTTTTTTGTGGGTCTCATTTTTTTGTATACCCTTGTATATTCTTCATCTTTTTTCTCAATGAATATTCGGTTTCTTACAACAAAAATAAAAAATCCATTGGTTCTATGAAATGTGTGTCAAGGGAAGCTTTACAAACTTTGCTCGTGGAGAAATTAATGACTTTACAGCTCAGTTCACTGATTGGCAATTGATGTCTCTAAGTTCCAAGTATTTTATTTGATAACAATTTTAGAGGATACTTCGAGATGGGAAATTTCTGAAACCATTTATCCCACTATGTTGATCATATTTGGGTTGTAAGCTCTGATATGCTCTTATGTTTGTTTAACCAACAAGTTATTCTTTGTTGATTATTTTCAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTACTTAACGATGGCCAGTCGGGAAACGATGAATCGAGAAAATCCGTGCTTGAAGGAGTGCGAAGAAAGATAATCGAGAGAGTGGTGAGAGATCATGAAGATGAGAATGACAATGGGTATTCGAGTGATTAGTTTTTGAATCAATTGCTTTCTTATGTGTGTTGTTGCTCTCTGTGTTGGTTGTTTTAGTTGGAAGTTAAAGAAGTGTGTTTGGTTATAATTTGTGGGCTTACACAATGGATGTGTATTCCTGTTTCCATCGAACTTTTTATTATCGGATGAATGCTTACGTGATGTATAATGAGATGGAAAACATTCAGATGTGACAACAATATTTATTAATTTGTAACTTTTAAAAAATTTAATAGCGGCTTCCCTAGCATCATCCAGGGGGTGTTTGTATGCGAG CTCTCCAACAAACAGCCCCCAAGAGTTAGATTAAAAAAAAGACTAAAAAAATAGTTTCCTTTTAATTAAAATTGAGATCCCAAATACCCGAAATTGATCGAAGATCCCAAATACTCCCGATTTGGTCGATCCCTCGAAATTCTCTTGTGAAACTCGCTCGCTCAACAATGGCGGATTACCATTTCGTGTACAAAGACGTGGAAGGAGCCTCCACTCAGTGGGATGATATTCAGGCTAAGCTTGGAAACCTACCTCCAAAGCCTGCTCCCTTCAAGCCTCCAGCCTTCACGCCTGCCCTAGATGAGGCCTCCGTCCCTAAAGACAAGTCTTGGATCGATCACAAAACGGAAGAGGAGCTCGAAGACCTTGAGGATGATCTAGATCTTGACGATGACAACTTCCTCCAAGAGTATAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAGTCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTCATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAACTGTTTGAAAGAACTGGCCTCGAGATATCCAGCCACAAAGTTTGTTAAAATAATATCCACAGACTGCATTCCGAACTATCCTGATTGTAATCTTCCTACTCTGTTAGTTTACAACAATAGTGCAGTGAAAGCAAATTATGTGGGCCTTCGTAGTTTCGGCAGAAGATGCACGCCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTACTTAACGATGGCCAGTCGGGAAACGATGAATCGAGAAAATCCGTGCTTGAAGGAGTGCGAAGAAAGATAATCGAGAGAGTGGTGAGAGATCATGAAGATGAGAATGACAATGGGTATTCGAGTGATTAGTTTTTGAATCAATTGCTTTCTTATGTGTGTTGTTGCTCTCTGTGTTGGTTGTTTTAGTTGGAAGTTAAAGAAGTGTGTTTGGTTATAATTTGTGGGCTTACACAATGGATGTGTATTCCTGTTTCCATCGAACTTTTTATTATCGGATGAATGCTTACGTGATGTATAATGAGATGGAAAACATTCAGATGTGACAACAATATTTATTAATTTGTAACTTTTAAAAAATTTAATAGCGGCTTCCCTAGCATCATCCAGGGGGTGTTTGTATGCGAG ATGGCGGATTACCATTTCGTGTACAAAGACGTGGAAGGAGCCTCCACTCAGTGGGATGATATTCAGGCTAAGCTTGGAAACCTACCTCCAAAGCCTGCTCCCTTCAAGCCTCCAGCCTTCACGCCTGCCCTAGATGAGGCCTCCGTCCCTAAAGACAAGTCTTGGATCGATCACAAAACGGAAGAGGAGCTCGAAGACCTTGAGGATGATCTAGATCTTGACGATGACAACTTCCTCCAAGAGTATAGGAAAAAGAGGTTGGTGGAGATTAGAGAAGCAGCTAAAGTCTCTAAATTTGGATCAATAAATCCAATATCAGGGTCGGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTCATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAACTGTTTGAAAGAACTGGCCTCGAGATATCCAGCCACAAAGTTTGTTAAAATAATATCCACAGACTGCATTCCGAACTATCCTGATTGTAATCTTCCTACTCTGTTAGTTTACAACAATAGTGCAGTGAAAGCAAATTATGTGGGCCTTCGTAGTTTCGGCAGAAGATGCACGCCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTACTTAACGATGGCCAGTCGGGAAACGATGAATCGAGAAAATCCGTGCTTGAAGGAGTGCGAAGAAAGATAATCGAGAGAGTGGTGAGAGATCATGAAGATGAGAATGACAATGGGTATTCGAGTGATTAG MADYHFVYKDVEGASTQWDDIQAKLGNLPPKPAPFKPPAFTPALDEASVPKDKSWIDHKTEEELEDLEDDLDLDDDNFLQEYRKKRLVEIREAAKVSKFGSINPISGSDFVREVSQAPSDVWVVVILYKEGIQECDVLMNCLKELASRYPATKFVKIISTDCIPNYPDCNLPTLLVYNNSAVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDESRKSVLEGVRRKIIERVVRDHEDENDNGYSSD Homology
BLAST of Sed0027775.1 vs. NCBI nr
Match: XP_023535516.1 (phosducin-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023535517.1 phosducin-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.3 bits (1248), Expect = 3.1e-133 Identity = 238/253 (94.07%), Postives = 245/253 (96.84%), Query Frame = 0
BLAST of Sed0027775.1 vs. NCBI nr
Match: XP_022973988.1 (phosducin-like protein 3 [Cucurbita maxima]) HSP 1 Score: 483.8 bits (1244), Expect = 9.1e-133 Identity = 237/253 (93.68%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Sed0027775.1 vs. NCBI nr
Match: XP_022925476.1 (phosducin-like protein 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 481.9 bits (1239), Expect = 3.4e-132 Identity = 236/253 (93.28%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Sed0027775.1 vs. NCBI nr
Match: XP_008459619.1 (PREDICTED: phosducin-like protein 3 [Cucumis melo]) HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132 Identity = 237/254 (93.31%), Postives = 244/254 (96.06%), Query Frame = 0
BLAST of Sed0027775.1 vs. NCBI nr
Match: KAG7025184.1 (Viral IAP-associated factor-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 480.3 bits (1235), Expect = 1.0e-131 Identity = 235/253 (92.89%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy Swiss-Prot
Match: Q9H2J4 (Phosducin-like protein 3 OS=Homo sapiens OX=9606 GN=PDCL3 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.5e-33 Identity = 86/243 (35.39%), Postives = 135/243 (55.56%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy Swiss-Prot
Match: Q6P268 (Phosducin-like protein 3 OS=Danio rerio OX=7955 GN=pdcl3 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.2e-32 Identity = 77/181 (42.54%), Postives = 110/181 (60.77%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy Swiss-Prot
Match: Q5RB77 (Phosducin-like protein 3 OS=Pongo abelii OX=9601 GN=PDCL3 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.4e-32 Identity = 85/243 (34.98%), Postives = 134/243 (55.14%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy Swiss-Prot
Match: Q8BVF2 (Phosducin-like protein 3 OS=Mus musculus OX=10090 GN=Pdcl3 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31 Identity = 74/188 (39.36%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy Swiss-Prot
Match: Q4KLJ8 (Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31 Identity = 85/236 (36.02%), Postives = 134/236 (56.78%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy TrEMBL
Match: A0A6J1IEW1 (phosducin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111472601 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 4.4e-133 Identity = 237/253 (93.68%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy TrEMBL
Match: A0A6J1ECB4 (phosducin-like protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432767 PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132 Identity = 236/253 (93.28%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy TrEMBL
Match: A0A1S3CA51 (phosducin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498690 PE=3 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132 Identity = 237/254 (93.31%), Postives = 244/254 (96.06%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy TrEMBL
Match: A0A6J1CKG4 (phosducin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111012114 PE=3 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 4.9e-132 Identity = 234/253 (92.49%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Sed0027775.1 vs. ExPASy TrEMBL
Match: A0A5D3BNX8 (Phosducin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00560 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.3e-132 Identity = 236/254 (92.91%), Postives = 243/254 (95.67%), Query Frame = 0
BLAST of Sed0027775.1 vs. TAIR 10
Match: AT5G14240.1 (Thioredoxin superfamily protein ) HSP 1 Score: 392.1 bits (1006), Expect = 3.3e-109 Identity = 186/256 (72.66%), Postives = 223/256 (87.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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