Sed0027655.1 (mRNA) Chayote v1

Overview
NameSed0027655.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG11: 34230251 .. 34232389 (-)
Sequence length2139
RNA-Seq ExpressionSed0027655.1
SyntenySed0027655.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCCCCCTCTCCCGCTTTCAAAACTATGTTTATGATCAGCTTCATTGTACAATTCCCACATCTAGCTCCACTTCCCACTTCTCCCTTCGTTTCTCAGATTCCGATCATTTTAGGAACAAATCTTTGCTGTCTGGCTTTTCTCTGTGCTCTAACAGGAGAAAATTGCGTAATTCGTTTTGTTGGGTTAAGTGCTCTTCGTTGGAGCAAGGACTACGGCCACGCCCCGAACCCAAACCTTCGAAAATCGATCTGGGTTTTCGAAAAGGGACGTCTTCGAAGAAGACCCATATTAGAAAATCTGGTGTAGGGATCTGTAGTCAGATCGAGAAGTTGGTTTTGTGTAAGAAGTACCGAGATGCACTTGAGATGTTTGAGATTTTTGAGATGGAGGGTGGTTATGATATTGGGAATAGTACGTTTGATGCTTTGATTAATGCGTGTATTGGGTTGAAATCTATAAGAGGGGTGAAGAGGCTGTGTAGTTACATGATCGATAATGGATTTGAGCTGGATCAATATATGAGGAACAGGGTTCTACTTATGCATGTGAAATGTGGGATGATGATTGATGCTGGTAGGTTGTTCGATGAAATGTCGGAGAGGAATGCGGTTTCGTGGAACACTATAATTTCTGGGTATGTAGACTCTGGAAATTATGGAGAAGCGTTTAGATTGTTTGTTATGATGTGGGAGGAGTATTCTGATTGTGGTCCTCGCACCTTTGCTACAATGATTCGGGCATCGGCTGGTTTGGAGCTTATTTTTCCTGGTAGGCAATTGCATTCGTGTGCGGTGAAGGCGGGCGTGGGACAGGACATTTTTGTTTTATGTGCGTTGATCGACATGTACAGCAAGTGTGGAAGCCTTGAAGATGCTCATTGTGTGTTTGATGAGATGCCCGAGAAGACAGTAGTTGGATGGAATTCAATCATAGCCGGTTATGCCCTCCATGGCTACAGTGAGGAAGCTCTGGATCTGGTTTATGAGATGCGTGATTCTGGAGTTCAAATGGACCATTTCACCTTTTCTATAATTATTAGGATATGTTCAAGATTAGCCTCAGTAACACGTGCTAAGCAAGCGCATGCGAGTTTAGTTCGCAATGGCTTCGGGTTAGATGCCGTAGCTAATACGGCGCTTGTGGATTTCTATAGCAAATGGGGGAAAGTAGACGACGCTAGGCATGTTTTCGACAGGATGTCATATAAAAATTTGATATCATGGAATGCTTTGATTGCTGGATATGGGAATCATGGTCGAGGGGAGGAGGCTATCGAGATGTTCGAGAGAATGCTTCGGGAAGGAATGATGCCGAACCATGTGACATTTCTGGCTGTTCTATCTGCTTGTAGTATTTCAGGTTTGTTTGAACGTGGATGGGAATATTTTCAATCAATGGCTAGAGATCACAAAGTTAAACCGCGCGCGATGCATTATGCGTCCATGATCGAATTGCTAGGTCGAGAAGGGCTCCTAGATGAAGCGTATGCCCTAATAGGGAAAGCTCCATTTCAACCTACAGCAAATATGTGGGCTGCCTTGCTTAGAGCTTGTAGAGTTCATGAAAATCTAGAACTTGGGAAATTTGCTGCTGAAAAACTTTATGGGATGGAACCAGAGAAGCTCAGCAATTATATTGTGCTCTTAAACATATACAACAGTTCTGGCAAGTTAAAGGAAGCAGCTGATGTTGTTCGAACATTGAAAAGAAAAGGCTTGAGAATGCTACCAGCTTGTAGTTGGATTGAAATTAAAAATCAACCCCACGCATTCCTCTCTGGAGATAAGCACCATGCCGATATTGAAAAAGTCGTCGCGAAAGTAGACGAGTTAATGTTAAAGATCTCGAAGCTTGGTTATGTTTCTGAGCCAAACTTCTTGCTTCCAGATGTTGATGAACATGAAGAAAAGATGCAAACGTACCACAGTGAGAAATTGGCAATAGCTTATGGACTCATCAATACTGTAAAGAAAACGGCATTGCAAATTGTGCAGAGCCATCGGATTTGCAGTGACTGCCATTCTGTGATTAAGCTGATTGCTTTGATAACCAAACGTGAAATTGTGGTCAGAGATGGTAGCAGATTTCACCATTTCAGAGATGGTAATTGTTCTTGTGGAGACTATTGGTGA

mRNA sequence

ATGGAAATCCCCCTCTCCCGCTTTCAAAACTATGTTTATGATCAGCTTCATTGTACAATTCCCACATCTAGCTCCACTTCCCACTTCTCCCTTCGTTTCTCAGATTCCGATCATTTTAGGAACAAATCTTTGCTGTCTGGCTTTTCTCTGTGCTCTAACAGGAGAAAATTGCGTAATTCGTTTTGTTGGGTTAAGTGCTCTTCGTTGGAGCAAGGACTACGGCCACGCCCCGAACCCAAACCTTCGAAAATCGATCTGGGTTTTCGAAAAGGGACGTCTTCGAAGAAGACCCATATTAGAAAATCTGGTGTAGGGATCTGTAGTCAGATCGAGAAGTTGGTTTTGTGTAAGAAGTACCGAGATGCACTTGAGATGTTTGAGATTTTTGAGATGGAGGGTGGTTATGATATTGGGAATAGTACGTTTGATGCTTTGATTAATGCGTGTATTGGGTTGAAATCTATAAGAGGGGTGAAGAGGCTGTGTAGTTACATGATCGATAATGGATTTGAGCTGGATCAATATATGAGGAACAGGGTTCTACTTATGCATGTGAAATGTGGGATGATGATTGATGCTGGTAGGTTGTTCGATGAAATGTCGGAGAGGAATGCGGTTTCGTGGAACACTATAATTTCTGGGTATGTAGACTCTGGAAATTATGGAGAAGCGTTTAGATTGTTTGTTATGATGTGGGAGGAGTATTCTGATTGTGGTCCTCGCACCTTTGCTACAATGATTCGGGCATCGGCTGGTTTGGAGCTTATTTTTCCTGGTAGGCAATTGCATTCGTGTGCGGTGAAGGCGGGCGTGGGACAGGACATTTTTGTTTTATGTGCGTTGATCGACATGTACAGCAAGTGTGGAAGCCTTGAAGATGCTCATTGTGTGTTTGATGAGATGCCCGAGAAGACAGTAGTTGGATGGAATTCAATCATAGCCGGTTATGCCCTCCATGGCTACAGTGAGGAAGCTCTGGATCTGGTTTATGAGATGCGTGATTCTGGAGTTCAAATGGACCATTTCACCTTTTCTATAATTATTAGGATATGTTCAAGATTAGCCTCAGTAACACGTGCTAAGCAAGCGCATGCGAGTTTAGTTCGCAATGGCTTCGGGTTAGATGCCGTAGCTAATACGGCGCTTGTGGATTTCTATAGCAAATGGGGGAAAGTAGACGACGCTAGGCATGTTTTCGACAGGATGTCATATAAAAATTTGATATCATGGAATGCTTTGATTGCTGGATATGGGAATCATGGTCGAGGGGAGGAGGCTATCGAGATGTTCGAGAGAATGCTTCGGGAAGGAATGATGCCGAACCATGTGACATTTCTGGCTGTTCTATCTGCTTGTAGTATTTCAGGTTTGTTTGAACGTGGATGGGAATATTTTCAATCAATGGCTAGAGATCACAAAGTTAAACCGCGCGCGATGCATTATGCGTCCATGATCGAATTGCTAGGTCGAGAAGGGCTCCTAGATGAAGCGTATGCCCTAATAGGGAAAGCTCCATTTCAACCTACAGCAAATATGTGGGCTGCCTTGCTTAGAGCTTGTAGAGTTCATGAAAATCTAGAACTTGGGAAATTTGCTGCTGAAAAACTTTATGGGATGGAACCAGAGAAGCTCAGCAATTATATTGTGCTCTTAAACATATACAACAGTTCTGGCAAGTTAAAGGAAGCAGCTGATGTTGTTCGAACATTGAAAAGAAAAGGCTTGAGAATGCTACCAGCTTGTAGTTGGATTGAAATTAAAAATCAACCCCACGCATTCCTCTCTGGAGATAAGCACCATGCCGATATTGAAAAAGTCGTCGCGAAAGTAGACGAGTTAATGTTAAAGATCTCGAAGCTTGGTTATGTTTCTGAGCCAAACTTCTTGCTTCCAGATGTTGATGAACATGAAGAAAAGATGCAAACGTACCACAGTGAGAAATTGGCAATAGCTTATGGACTCATCAATACTGTAAAGAAAACGGCATTGCAAATTGTGCAGAGCCATCGGATTTGCAGTGACTGCCATTCTGTGATTAAGCTGATTGCTTTGATAACCAAACGTGAAATTGTGGTCAGAGATGGTAGCAGATTTCACCATTTCAGAGATGGTAATTGTTCTTGTGGAGACTATTGGTGA

Coding sequence (CDS)

ATGGAAATCCCCCTCTCCCGCTTTCAAAACTATGTTTATGATCAGCTTCATTGTACAATTCCCACATCTAGCTCCACTTCCCACTTCTCCCTTCGTTTCTCAGATTCCGATCATTTTAGGAACAAATCTTTGCTGTCTGGCTTTTCTCTGTGCTCTAACAGGAGAAAATTGCGTAATTCGTTTTGTTGGGTTAAGTGCTCTTCGTTGGAGCAAGGACTACGGCCACGCCCCGAACCCAAACCTTCGAAAATCGATCTGGGTTTTCGAAAAGGGACGTCTTCGAAGAAGACCCATATTAGAAAATCTGGTGTAGGGATCTGTAGTCAGATCGAGAAGTTGGTTTTGTGTAAGAAGTACCGAGATGCACTTGAGATGTTTGAGATTTTTGAGATGGAGGGTGGTTATGATATTGGGAATAGTACGTTTGATGCTTTGATTAATGCGTGTATTGGGTTGAAATCTATAAGAGGGGTGAAGAGGCTGTGTAGTTACATGATCGATAATGGATTTGAGCTGGATCAATATATGAGGAACAGGGTTCTACTTATGCATGTGAAATGTGGGATGATGATTGATGCTGGTAGGTTGTTCGATGAAATGTCGGAGAGGAATGCGGTTTCGTGGAACACTATAATTTCTGGGTATGTAGACTCTGGAAATTATGGAGAAGCGTTTAGATTGTTTGTTATGATGTGGGAGGAGTATTCTGATTGTGGTCCTCGCACCTTTGCTACAATGATTCGGGCATCGGCTGGTTTGGAGCTTATTTTTCCTGGTAGGCAATTGCATTCGTGTGCGGTGAAGGCGGGCGTGGGACAGGACATTTTTGTTTTATGTGCGTTGATCGACATGTACAGCAAGTGTGGAAGCCTTGAAGATGCTCATTGTGTGTTTGATGAGATGCCCGAGAAGACAGTAGTTGGATGGAATTCAATCATAGCCGGTTATGCCCTCCATGGCTACAGTGAGGAAGCTCTGGATCTGGTTTATGAGATGCGTGATTCTGGAGTTCAAATGGACCATTTCACCTTTTCTATAATTATTAGGATATGTTCAAGATTAGCCTCAGTAACACGTGCTAAGCAAGCGCATGCGAGTTTAGTTCGCAATGGCTTCGGGTTAGATGCCGTAGCTAATACGGCGCTTGTGGATTTCTATAGCAAATGGGGGAAAGTAGACGACGCTAGGCATGTTTTCGACAGGATGTCATATAAAAATTTGATATCATGGAATGCTTTGATTGCTGGATATGGGAATCATGGTCGAGGGGAGGAGGCTATCGAGATGTTCGAGAGAATGCTTCGGGAAGGAATGATGCCGAACCATGTGACATTTCTGGCTGTTCTATCTGCTTGTAGTATTTCAGGTTTGTTTGAACGTGGATGGGAATATTTTCAATCAATGGCTAGAGATCACAAAGTTAAACCGCGCGCGATGCATTATGCGTCCATGATCGAATTGCTAGGTCGAGAAGGGCTCCTAGATGAAGCGTATGCCCTAATAGGGAAAGCTCCATTTCAACCTACAGCAAATATGTGGGCTGCCTTGCTTAGAGCTTGTAGAGTTCATGAAAATCTAGAACTTGGGAAATTTGCTGCTGAAAAACTTTATGGGATGGAACCAGAGAAGCTCAGCAATTATATTGTGCTCTTAAACATATACAACAGTTCTGGCAAGTTAAAGGAAGCAGCTGATGTTGTTCGAACATTGAAAAGAAAAGGCTTGAGAATGCTACCAGCTTGTAGTTGGATTGAAATTAAAAATCAACCCCACGCATTCCTCTCTGGAGATAAGCACCATGCCGATATTGAAAAAGTCGTCGCGAAAGTAGACGAGTTAATGTTAAAGATCTCGAAGCTTGGTTATGTTTCTGAGCCAAACTTCTTGCTTCCAGATGTTGATGAACATGAAGAAAAGATGCAAACGTACCACAGTGAGAAATTGGCAATAGCTTATGGACTCATCAATACTGTAAAGAAAACGGCATTGCAAATTGTGCAGAGCCATCGGATTTGCAGTGACTGCCATTCTGTGATTAAGCTGATTGCTTTGATAACCAAACGTGAAATTGTGGTCAGAGATGGTAGCAGATTTCACCATTTCAGAGATGGTAATTGTTCTTGTGGAGACTATTGGTGA

Protein sequence

MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNSFCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHHADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW
Homology
BLAST of Sed0027655.1 vs. NCBI nr
Match: XP_022133879.1 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Momordica charantia] >XP_022133880.1 pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Momordica charantia])

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 616/713 (86.40%), Postives = 665/713 (93.27%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PL R+QNYVYD+L C+  TSSS+S+  +RF+DS  FR +SLLS ++L SNRRKLRNS
Sbjct: 3   MEVPLPRYQNYVYDRLQCS-STSSSSSYLPVRFTDSKLFRKRSLLSEYTLWSNRRKLRNS 62

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKK-THIRKSGVGICSQIEKLVLCKKY 120
           FCW+KCSSLEQGLRPRPEP+PSKID   RKGTSS + T IRKSGVGICSQIEKLVLCKKY
Sbjct: 63  FCWIKCSSLEQGLRPRPEPRPSKIDHDVRKGTSSNETTRIRKSGVGICSQIEKLVLCKKY 122

Query: 121 RDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNR 180
           RDALEMFEIFE+EGGYDIGNST+DALINACIGLKSIRGVKRLC+YMIDNGFE DQYM+NR
Sbjct: 123 RDALEMFEIFELEGGYDIGNSTYDALINACIGLKSIRGVKRLCNYMIDNGFEPDQYMKNR 182

Query: 181 VLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCG 240
           +LLMHVKCGMMIDA RLFDEM ERNAVSW+TIISGYVDSGNY EAFRLF+MMWEE SD G
Sbjct: 183 ILLMHVKCGMMIDACRLFDEMPERNAVSWSTIISGYVDSGNYIEAFRLFIMMWEECSDSG 242

Query: 241 PRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFD 300
           PRTFA MIRASAGLELIFPGRQLHSCA+KAGVGQDIFV CALIDMYSKCGSLEDAHCVFD
Sbjct: 243 PRTFAIMIRASAGLELIFPGRQLHSCAIKAGVGQDIFVSCALIDMYSKCGSLEDAHCVFD 302

Query: 301 EMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTR 360
           EMP+KT+VGWNSIIAGYALHGYSEEALDL YEMRDSG++MDHFTFSIIIRICSRLASV R
Sbjct: 303 EMPDKTIVGWNSIIAGYALHGYSEEALDLCYEMRDSGIKMDHFTFSIIIRICSRLASVAR 362

Query: 361 AKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGN 420
           AKQ HA LVRNGFGLD VANTALVDFYSKWGK+DDARH+FDRMS+KN+ISWNALIAGYGN
Sbjct: 363 AKQVHAGLVRNGFGLDVVANTALVDFYSKWGKIDDARHIFDRMSHKNIISWNALIAGYGN 422

Query: 421 HGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAM 480
           HGRGEEAI+MFERMLREGM PNHVTFLAVLSACSISGLFERGWE FQS+  DHK+KPRAM
Sbjct: 423 HGRGEEAIQMFERMLREGMTPNHVTFLAVLSACSISGLFERGWEIFQSITTDHKIKPRAM 482

Query: 481 HYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGM 540
           H+A MIELLGREGLLDEAYALI  APF+PTANMWAALLRACRVHENLELGK AAE LYGM
Sbjct: 483 HFACMIELLGREGLLDEAYALIRNAPFKPTANMWAALLRACRVHENLELGKLAAENLYGM 542

Query: 541 EPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKH 600
           EP+KLSNYIVLLNIYNSSGKLKEAADVV+TLKRKGLRM+PACSWIE+KNQPH+FLSGDKH
Sbjct: 543 EPDKLSNYIVLLNIYNSSGKLKEAADVVQTLKRKGLRMVPACSWIEVKNQPHSFLSGDKH 602

Query: 601 HADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
           HA+IEKVV KVDE+MLKISKLGYV+E NFLLPDVDE EEK+  YHSEKLAIAYGL++T+K
Sbjct: 603 HAEIEKVVEKVDEIMLKISKLGYVAEQNFLLPDVDEKEEKIHMYHSEKLAIAYGLLSTLK 662

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           KT LQIVQSHRIC DCHS IKLIALIT+REIVVRD SRFHHFRDG+CSCGDYW
Sbjct: 663 KTPLQIVQSHRICGDCHSTIKLIALITRREIVVRDASRFHHFRDGSCSCGDYW 714

BLAST of Sed0027655.1 vs. NCBI nr
Match: XP_004148701.1 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 [Cucumis sativus] >XP_031740897.1 pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 607/715 (84.90%), Postives = 652/715 (91.19%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PLSR+QNYVYD+L C     +STS FSLR+SDSD F   S L      SN RK RNS
Sbjct: 3   MELPLSRYQNYVYDRLQC-----NSTSFFSLRYSDSDLFTKTSFL------SNPRKYRNS 62

Query: 61  FCWVKCSSLEQGL--RPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKK 120
           FCW+KCSS EQGL  RPRP+PKPSK+D+G RK T  K+TH++KS VGICSQIEKLVLCKK
Sbjct: 63  FCWIKCSSFEQGLRPRPRPQPKPSKLDVGDRKETPLKETHVKKSSVGICSQIEKLVLCKK 122

Query: 121 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 180
           YRDALEMFEIFE+E G+ +G ST+DALINACIGLKSIRGVKRLC+YM+DNGFE DQYMRN
Sbjct: 123 YRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 182

Query: 181 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 240
           RVLLMHVKCGMMIDA RLFDEM  RNAVSW TIISGYVDSGNY EAFRLF++M EE+ DC
Sbjct: 183 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 242

Query: 241 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 300
           GPRTFATMIRASAGLE+IFPGRQLHSCA+KAG+GQDIFV CALIDMYSKCGSLEDAHCVF
Sbjct: 243 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 302

Query: 301 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 360
           DEMP+KT+VGWNSIIAGYALHGYSEEALDL +EMRDSGV+MDHFTFSIIIRICSRLASV 
Sbjct: 303 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 362

Query: 361 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 420
           RAKQ HASLVRNGFGLD VANTALVDFYSKWGKVDDARHVFDRMS +N+ISWNALIAGYG
Sbjct: 363 RAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG 422

Query: 421 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 480
           NHG GEEAI+MFE+MLREGMMPNHVTFLAVLSACSISGLFERGWE FQSM RDHKVKPRA
Sbjct: 423 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 482

Query: 481 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 540
           MH+A MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVH NLELGKFAAEKLYG
Sbjct: 483 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 542

Query: 541 MEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDK 600
           MEPEKLSNYIVLLNIYNSSGKLKEAADV +TLKRKGLRMLPACSWIE+ NQPHAFLSGDK
Sbjct: 543 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 602

Query: 601 HHADIEKVVAKVDELMLKISKLGYV-SEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINT 660
           HH  IEKVV KVDELML ISKLGYV  E NF+LPDVDE+EEK++ YHSEKLAIAYGL+NT
Sbjct: 603 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMYHSEKLAIAYGLLNT 662

Query: 661 VKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           ++KT LQIVQSHRICSDCHSVIKLIA+ITKREIV+RD SRFHHFRDG+CSCGDYW
Sbjct: 663 LEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706

BLAST of Sed0027655.1 vs. NCBI nr
Match: XP_008459324.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Cucumis melo] >XP_008459325.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Cucumis melo])

HSP 1 Score: 1242.6 bits (3214), Expect = 0.0e+00
Identity = 604/713 (84.71%), Postives = 650/713 (91.16%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PLSR+QNYVYD+L C      ST +FSLR+SDS  F   S L      SNRRK RNS
Sbjct: 3   MELPLSRYQNYVYDRLQC-----YSTPYFSLRYSDSHLFMKTSFL------SNRRKCRNS 62

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYR 120
           FCWVKCSS EQGLRPRP+PKPSK+D+G RK    K+T +RKS VGICSQIEKLVLCK+YR
Sbjct: 63  FCWVKCSSFEQGLRPRPQPKPSKLDVGVRKEAPLKETPVRKSSVGICSQIEKLVLCKQYR 122

Query: 121 DALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRV 180
           DALEMFEIFE+E G+ +GNST+DALINACIGLKSIRGVKRL +YM+DNGFE DQYMRNRV
Sbjct: 123 DALEMFEIFELEDGFHVGNSTYDALINACIGLKSIRGVKRLFNYMVDNGFEPDQYMRNRV 182

Query: 181 LLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGP 240
           LLMHVKCGMMIDA RLFDEM ERNAVSW+TIISGYVDSGNY EAFRLF++MWEE   CGP
Sbjct: 183 LLMHVKCGMMIDACRLFDEMPERNAVSWSTIISGYVDSGNYVEAFRLFILMWEESYGCGP 242

Query: 241 RTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDE 300
           RT ATMIRASAGLE+IF GRQLHSCA+KAG+GQDIFV CALIDMYSKCGSLEDAHCVFDE
Sbjct: 243 RTLATMIRASAGLEIIFVGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDE 302

Query: 301 MPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRA 360
           MP+KT+VGWNSIIAGYALHGYSEEALDL +EM  SGV+MDHFTFSIIIRICSRLASV RA
Sbjct: 303 MPDKTIVGWNSIIAGYALHGYSEEALDLYHEMCRSGVKMDHFTFSIIIRICSRLASVARA 362

Query: 361 KQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNH 420
           KQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARHVFDRMS +N+ISWNALIAGYGNH
Sbjct: 363 KQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNVISWNALIAGYGNH 422

Query: 421 GRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMH 480
           GRGEEAI+MFE+MLREGMMPNHVTFLAVLSACSISGLFERGWE FQSM RDHKV+PRAMH
Sbjct: 423 GRGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVRPRAMH 482

Query: 481 YASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGME 540
           +A MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVH NLELGKFAAEKLYGME
Sbjct: 483 FACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGME 542

Query: 541 PEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHH 600
           PEKLSNYIVLLNIYN+SGKLKEAADVV+TLKRKGLRMLPACSWIE+ NQPHAFLSGDKHH
Sbjct: 543 PEKLSNYIVLLNIYNTSGKLKEAADVVQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHH 602

Query: 601 ADIEKVVAKVDELMLKISKLGYV-SEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
             +EKVV KVDELMLKISKLGYV  E NF+LPDVDEHEEK++ YHSEKLAIAYGL+NT++
Sbjct: 603 VQLEKVVGKVDELMLKISKLGYVPEEQNFMLPDVDEHEEKIRMYHSEKLAIAYGLLNTLE 662

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           +T LQIVQSHRICSDCHSVIKLIA+ITKREIV+RD SRFHHFRDGNCSCGDYW
Sbjct: 663 RTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGNCSCGDYW 704

BLAST of Sed0027655.1 vs. NCBI nr
Match: XP_022989822.1 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 604/712 (84.83%), Postives = 648/712 (91.01%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PL  +QNYV+D L  T   SSSTS+FS  FS S+ FR++SLLS +SL SNRRKLRNS
Sbjct: 1   MEVPL--YQNYVHDHLRRT-SLSSSTSYFSHHFSGSELFRDRSLLSAYSLWSNRRKLRNS 60

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYR 120
           FCWVKCSSLEQGLRPR +PKPSK+D   RKGT SK+T I KS V IC  IEKLVLC K+R
Sbjct: 61  FCWVKCSSLEQGLRPRLKPKPSKVDRDVRKGTPSKETRITKSSVRICCHIEKLVLCNKFR 120

Query: 121 DALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRV 180
           DALEMFEI E+EGGYD+GNSTFDALI ACIGLKSIRG KRLC+YMIDNG E DQY+ NR+
Sbjct: 121 DALEMFEILELEGGYDVGNSTFDALIIACIGLKSIRGAKRLCAYMIDNGIEPDQYIMNRI 180

Query: 181 LLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGP 240
           LLMHV+CGMMIDA +LFDEM ERNAVSWNTIISGYVDSGNY EAFRLF+MMWEEY  C P
Sbjct: 181 LLMHVRCGMMIDASKLFDEMPERNAVSWNTIISGYVDSGNYKEAFRLFIMMWEEYPGCSP 240

Query: 241 RTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDE 300
           RTFAT+IRASAGLELIFPG+QLHSCAVKAGVGQDIFV CALIDMYSKCG LEDAHCVFDE
Sbjct: 241 RTFATVIRASAGLELIFPGKQLHSCAVKAGVGQDIFVSCALIDMYSKCGGLEDAHCVFDE 300

Query: 301 MPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRA 360
           MP+KT+VGWNSIIAGYALHG+SEEAL+L ++MRDSGV++DHFTFSIIIRICSRLASVTRA
Sbjct: 301 MPDKTIVGWNSIIAGYALHGHSEEALNLYFQMRDSGVKIDHFTFSIIIRICSRLASVTRA 360

Query: 361 KQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNH 420
           KQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARH+FDRMS KNLISWNALIAGYGNH
Sbjct: 361 KQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHIFDRMSCKNLISWNALIAGYGNH 420

Query: 421 GRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMH 480
           GRGEEAIE+FERMLREGM+PNHVTFLAVLSACSISGLFERGWE FQSM RDHK+K RAMH
Sbjct: 421 GRGEEAIEIFERMLREGMVPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKIKLRAMH 480

Query: 481 YASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGME 540
           Y  MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVHENLELGK+AAEKLYGME
Sbjct: 481 YTCMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHENLELGKYAAEKLYGME 540

Query: 541 PEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHH 600
           PEKL NYIVLLNIY SSGKLKEAADVVRTLKRKGL MLPACSWIE+K+QPHAFLSGDKHH
Sbjct: 541 PEKLRNYIVLLNIYKSSGKLKEAADVVRTLKRKGLSMLPACSWIEVKHQPHAFLSGDKHH 600

Query: 601 ADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVKK 660
            +IEKVV KVDELML+ISKLGYV E N LLPDVD HEEK+Q YHSEKLAIAYGLINT+K+
Sbjct: 601 PEIEKVVEKVDELMLEISKLGYVPEQNILLPDVD-HEEKIQIYHSEKLAIAYGLINTLKQ 660

Query: 661 TALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           T LQIVQ HR+C DCHSVIKLIA+ITKREIVVRD SRFHHFRDG CSCGDYW
Sbjct: 661 TPLQIVQGHRVCGDCHSVIKLIAMITKREIVVRDASRFHHFRDGRCSCGDYW 708

BLAST of Sed0027655.1 vs. NCBI nr
Match: XP_038890388.1 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 [Benincasa hispida] >XP_038890389.1 pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 [Benincasa hispida] >XP_038890390.1 pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 601/713 (84.29%), Postives = 648/713 (90.88%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           MEIPLS +QNY+YD++ C     +STS+ SLRFS  D FR +     F LC NRRK RNS
Sbjct: 3   MEIPLSCYQNYLYDRVQC-----NSTSYVSLRFSYFDLFRER-----FFLC-NRRKCRNS 62

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYR 120
             W+KCSS EQGLRPRP+PKPSK+D G  K T  K+TH+ +S VGICSQIEKLVLCKKYR
Sbjct: 63  LRWIKCSSFEQGLRPRPQPKPSKLDPGVHKITPLKETHVMQSSVGICSQIEKLVLCKKYR 122

Query: 121 DALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRV 180
           DALEMFEIFE+EGG+  GN+T DALINAC+ LKSIRGVK+LC+YM+DNGFE DQYMRNRV
Sbjct: 123 DALEMFEIFELEGGFHAGNTTLDALINACVELKSIRGVKKLCNYMVDNGFEPDQYMRNRV 182

Query: 181 LLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGP 240
           LLMHVKCGMMIDA RLFD+M ERNAVSWNTIISG+VDSGNY EAFRLF++MWEEY DCGP
Sbjct: 183 LLMHVKCGMMIDACRLFDQMPERNAVSWNTIISGHVDSGNYVEAFRLFILMWEEYYDCGP 242

Query: 241 RTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDE 300
           RTFATMIRASAGLELIFPGRQLHSCA+KA +GQDIFV CALIDMYSKCGSLEDAHCVFDE
Sbjct: 243 RTFATMIRASAGLELIFPGRQLHSCAIKADLGQDIFVSCALIDMYSKCGSLEDAHCVFDE 302

Query: 301 MPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRA 360
           MP+KT+VGWNSIIAGYALHGYSEEALDL YEMRDSG++MDHFTFSIIIRICSRLASV  A
Sbjct: 303 MPDKTIVGWNSIIAGYALHGYSEEALDLYYEMRDSGIKMDHFTFSIIIRICSRLASVACA 362

Query: 361 KQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNH 420
           KQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARHVFDRMS +N+ISWNALIAGYGNH
Sbjct: 363 KQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNH 422

Query: 421 GRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMH 480
           GRG EAI+MFE+MLREG +PNHVTFLAVLSACSISGLFERGWE FQSM RDHK+KPRAMH
Sbjct: 423 GRGVEAIDMFEKMLREGKIPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKIKPRAMH 482

Query: 481 YASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGME 540
           YA MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVH NLELGKFAAEKLYGME
Sbjct: 483 YACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGME 542

Query: 541 PEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHH 600
           PEKLSNYIVLLNIYNSSGKLKEAADVV+TLKRKGLRMLPACSWIE+ NQPHAFLSGDKHH
Sbjct: 543 PEKLSNYIVLLNIYNSSGKLKEAADVVQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHH 602

Query: 601 ADIEKVVAKVDELMLKISKLGYV-SEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
             IEKVV KVDELMLKISKLGYV  E NF+LPDVDEHEEK+Q YHSEKLAIAYGL+NT++
Sbjct: 603 VQIEKVVGKVDELMLKISKLGYVPEEQNFMLPDVDEHEEKIQMYHSEKLAIAYGLLNTLE 662

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           +T LQIVQSHRICSDCH VIKLIA+ITKREIV+RD SRFHHFRDG+CSCGDYW
Sbjct: 663 QTPLQIVQSHRICSDCHFVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 704

BLAST of Sed0027655.1 vs. ExPASy Swiss-Prot
Match: Q9FK33 (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H58 PE=2 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 3.5e-249
Identity = 428/719 (59.53%), Postives = 535/719 (74.41%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           MEIPLSR+Q+   D++       SS++   L F              FSL    R+ +N 
Sbjct: 1   MEIPLSRYQSIRLDEIR-----DSSSNPKVLTFPRK-----------FSL--RGRRWKNP 60

Query: 61  FCWVKCSSLEQGLRPRP--EPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKK 120
           F  + CSS+ QGL+P+P  +P+P +I++   K      T I KSGV ICSQIEKLVLC +
Sbjct: 61  FGRLSCSSVVQGLKPKPKLKPEPIRIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNR 120

Query: 121 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 180
           +R+A E+FEI E+   + +G ST+DAL+ ACI LKSIR VKR+  +M+ NGFE +QYM N
Sbjct: 121 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 180

Query: 181 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 240
           R+LLMHVKCGM+IDA RLFDE+ ERN  S+ +IISG+V+ GNY EAF LF MMWEE SDC
Sbjct: 181 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 240

Query: 241 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 300
              TFA M+RASAGL  I+ G+QLH CA+K GV  + FV C LIDMYSKCG +EDA C F
Sbjct: 241 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 300

Query: 301 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 360
           + MPEKT V WN++IAGYALHGYSEEAL L+Y+MRDSGV +D FT SI+IRI ++LA + 
Sbjct: 301 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 360

Query: 361 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 420
             KQAHASL+RNGF  + VANTALVDFYSKWG+VD AR+VFD++  KN+ISWNAL+ GY 
Sbjct: 361 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYA 420

Query: 421 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 480
           NHGRG +A+++FE+M+   + PNHVTFLAVLSAC+ SGL E+GWE F SM+  H +KPRA
Sbjct: 421 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA 480

Query: 481 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 540
           MHYA MIELLGR+GLLDEA A I +AP + T NMWAALL ACR+ ENLELG+  AEKLYG
Sbjct: 481 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 540

Query: 541 MEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDK 600
           M PEKL NY+V+ N+YNS GK  EAA V+ TL+ KGL M+PAC+W+E+ +Q H+FLSGD+
Sbjct: 541 MGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDR 600

Query: 601 HHADIE----KVVAKVDELMLKISKLGYVSEPNFLLPDVDE-HEEKMQTYHSEKLAIAYG 660
             +  E    ++  KVDELM +IS+ GY  E   LLPDVDE  EE++  YHSEKLAIAYG
Sbjct: 601 FDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYG 660

Query: 661 LINTVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           L+NT +   LQI Q+HRIC +CH V++ I+L+T RE+VVRD SRFHHF++G CSCG YW
Sbjct: 661 LVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701

BLAST of Sed0027655.1 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 9.1e-133
Identity = 225/585 (38.46%), Postives = 365/585 (62.39%), Query Frame = 0

Query: 130 EMEGGYDIGNSTF-DALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVKCG 189
           ++EG Y   +  F + L+  C   K +   + + ++++ + F  D  M N +L M+ KCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 190 MMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGPRTFATMIR 249
            + +A ++F++M +R+ V+W T+ISGY       +A   F  M          T +++I+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 250 ASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDEMPEKTVVG 309
           A+A       G QLH   VK G   ++ V  AL+D+Y++ G ++DA  VFD +  +  V 
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 310 WNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRAKQAHASLV 369
           WN++IAG+A    +E+AL+L   M   G +  HF+++ +   CS    + + K  HA ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 370 RNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNHGRGEEAIE 429
           ++G  L A A   L+D Y+K G + DAR +FDR++ ++++SWN+L+  Y  HG G+EA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 430 MFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMHYASMIELL 489
            FE M R G+ PN ++FL+VL+ACS SGL + GW Y++ M +D  + P A HY ++++LL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 409

Query: 490 GREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGMEPEKLSNYI 549
           GR G L+ A   I + P +PTA +W ALL ACR+H+N ELG +AAE ++ ++P+    ++
Sbjct: 410 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 469

Query: 550 VLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHHADIEKVVA 609
           +L NIY S G+  +AA V + +K  G++  PACSW+EI+N  H F++ D+ H   E++  
Sbjct: 470 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 529

Query: 610 KVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQ-TYHSEKLAIAYGLINTVKKTALQIVQ 669
           K +E++ KI +LGYV + + ++  VD+ E ++   YHSEK+A+A+ L+NT   + + I +
Sbjct: 530 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 589

Query: 670 SHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           + R+C DCH+ IKL + +  REI+VRD +RFHHF+DGNCSC DYW
Sbjct: 590 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

BLAST of Sed0027655.1 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 4.2e-130
Identity = 229/611 (37.48%), Postives = 364/611 (59.57%), Query Frame = 0

Query: 139 NSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVK---CGMMIDAGR 198
           ++ F +++ +C  +  +R  + +  +++  G + D Y  N ++ M+ K    G  I  G 
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164

Query: 199 LFDEMSER---------------------------------NAVSWNTIISGYVDSGNYG 258
           +FDEM +R                                 + VS+NTII+GY  SG Y 
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224

Query: 259 EAFRLFVMMWEEYSDCGPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALI 318
           +A R+   M          T ++++   +    +  G+++H   ++ G+  D+++  +L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284

Query: 319 DMYSKCGSLEDAHCVFDEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHF 378
           DMY+K   +ED+  VF  +  +  + WNS++AGY  +G   EAL L  +M  + V+    
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344

Query: 379 TFSIIIRICSRLASVTRAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRM 438
            FS +I  C+ LA++   KQ H  ++R GFG +    +ALVD YSK G +  AR +FDRM
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404

Query: 439 SYKNLISWNALIAGYGNHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGW 498
           +  + +SW A+I G+  HG G EA+ +FE M R+G+ PN V F+AVL+ACS  GL +  W
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 499 EYFQSMARDHKVKPRAMHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRV 558
            YF SM + + +     HYA++ +LLGR G L+EAY  I K   +PT ++W+ LL +C V
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524

Query: 559 HENLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACS 618
           H+NLEL +  AEK++ ++ E +  Y+++ N+Y S+G+ KE A +   +++KGLR  PACS
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584

Query: 619 WIEIKNQPHAFLSGDKHHADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVD-EHEEKMQ 678
           WIE+KN+ H F+SGD+ H  ++K+   +  +M ++ K GYV++ + +L DVD EH+ ++ 
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELL 644

Query: 679 TYHSEKLAIAYGLINTVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHF 713
             HSE+LA+A+G+INT   T +++ ++ RIC+DCH  IK I+ IT+REI+VRD SRFHHF
Sbjct: 645 FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHF 704

BLAST of Sed0027655.1 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.4e-125
Identity = 230/632 (36.39%), Postives = 373/632 (59.02%), Query Frame = 0

Query: 82  SKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYRDALEMFEIFEMEGGYDIGNST 141
           SKI L FR   + + ++       + S+  +L   +    A++  +  +  G +   ++T
Sbjct: 6   SKIKL-FRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLW-ADSAT 65

Query: 142 FDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVKCGMMIDAGRLFDEMS 201
           +  LI  CI  +++     +C ++  NG     ++ N ++ M+VK  ++ DA +LFD+M 
Sbjct: 66  YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 125

Query: 202 ERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGPRTFATMIRASAGLELIFPGRQ 261
           +RN +SW T+IS Y     + +A  L V+M  +       T+++++R+  G+  +   R 
Sbjct: 126 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RM 185

Query: 262 LHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDEMPEKTVVGWNSIIAGYALHGY 321
           LH   +K G+  D+FV  ALID+++K G  EDA  VFDEM     + WNSII G+A +  
Sbjct: 186 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 245

Query: 322 SEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRAKQAHASLVRNGFGLDAVANTA 381
           S+ AL+L   M+ +G   +  T + ++R C+ LA +    QAH  +V+  +  D + N A
Sbjct: 246 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 305

Query: 382 LVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNHGRGEEAIEMFERMLREGMMPN 441
           LVD Y K G ++DA  VF++M  +++I+W+ +I+G   +G  +EA+++FERM   G  PN
Sbjct: 306 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 365

Query: 442 HVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMHYASMIELLGREGLLDEAYALI 501
           ++T + VL ACS +GL E GW YF+SM + + + P   HY  MI+LLG+ G LD+A  L+
Sbjct: 366 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 425

Query: 502 GKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLK 561
            +   +P A  W  LL ACRV  N+ L ++AA+K+  ++PE    Y +L NIY +S K  
Sbjct: 426 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 485

Query: 562 EAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHHADIEKVVAKVDELMLKISKLG 621
              ++   ++ +G++  P CSWIE+  Q HAF+ GD  H  I +V  K+++L+ +++ +G
Sbjct: 486 SVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIG 545

Query: 622 YVSEPNFLLPDVD-EHEEKMQTYHSEKLAIAYGLINTVKKTALQIVQSHRICSDCHSVIK 681
           YV E NF+L D++ E  E    +HSEKLA+A+GL+    +  ++I ++ RIC DCH   K
Sbjct: 546 YVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCK 605

Query: 682 LIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           L + +  R IV+RD  R+HHF+DG CSCGDYW
Sbjct: 606 LASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of Sed0027655.1 vs. ExPASy Swiss-Prot
Match: Q9S7F4 (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-124
Identity = 222/596 (37.25%), Postives = 360/596 (60.40%), Query Frame = 0

Query: 119 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 178
           Y +++ +F +   + G+   + TF  ++ A +GL      ++L +  +  GF  D  + N
Sbjct: 231 YTESIHLF-LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 290

Query: 179 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 238
           ++L  + K   +++   LFDEM E + VS+N +IS Y  +  Y  +   F  M     D 
Sbjct: 291 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 350

Query: 239 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 298
               FATM+  +A L  +  GRQLH  A+ A     + V  +L+DMY+KC   E+A  +F
Sbjct: 351 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 410

Query: 299 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 358
             +P++T V W ++I+GY   G     L L  +MR S ++ D  TF+ +++  +  AS+ 
Sbjct: 411 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 470

Query: 359 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 418
             KQ HA ++R+G   +  + + LVD Y+K G + DA  VF+ M  +N +SWNALI+ + 
Sbjct: 471 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 530

Query: 419 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 478
           ++G GE AI  F +M+  G+ P+ V+ L VL+ACS  G  E+G EYFQ+M+  + + P+ 
Sbjct: 531 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 590

Query: 479 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 538
            HYA M++LLGR G   EA  L+ + PF+P   MW+++L ACR+H+N  L + AAEKL+ 
Sbjct: 591 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 650

Query: 539 MEP-EKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGD 598
           ME     + Y+ + NIY ++G+ ++  DV + ++ +G++ +PA SW+E+ ++ H F S D
Sbjct: 651 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 710

Query: 599 KHHADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEE-KMQTYHSEKLAIAYGLIN 658
           + H + +++V K++EL  +I + GY  + + ++ DVDE  + +   YHSE+LA+A+ LI+
Sbjct: 711 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 770

Query: 659 TVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           T +   + ++++ R C DCH+ IKLI+ I KREI VRD SRFHHF +G CSCGDYW
Sbjct: 771 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825

BLAST of Sed0027655.1 vs. ExPASy TrEMBL
Match: A0A6J1BWH3 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006324 PE=3 SV=1)

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 616/713 (86.40%), Postives = 665/713 (93.27%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PL R+QNYVYD+L C+  TSSS+S+  +RF+DS  FR +SLLS ++L SNRRKLRNS
Sbjct: 3   MEVPLPRYQNYVYDRLQCS-STSSSSSYLPVRFTDSKLFRKRSLLSEYTLWSNRRKLRNS 62

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKK-THIRKSGVGICSQIEKLVLCKKY 120
           FCW+KCSSLEQGLRPRPEP+PSKID   RKGTSS + T IRKSGVGICSQIEKLVLCKKY
Sbjct: 63  FCWIKCSSLEQGLRPRPEPRPSKIDHDVRKGTSSNETTRIRKSGVGICSQIEKLVLCKKY 122

Query: 121 RDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNR 180
           RDALEMFEIFE+EGGYDIGNST+DALINACIGLKSIRGVKRLC+YMIDNGFE DQYM+NR
Sbjct: 123 RDALEMFEIFELEGGYDIGNSTYDALINACIGLKSIRGVKRLCNYMIDNGFEPDQYMKNR 182

Query: 181 VLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCG 240
           +LLMHVKCGMMIDA RLFDEM ERNAVSW+TIISGYVDSGNY EAFRLF+MMWEE SD G
Sbjct: 183 ILLMHVKCGMMIDACRLFDEMPERNAVSWSTIISGYVDSGNYIEAFRLFIMMWEECSDSG 242

Query: 241 PRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFD 300
           PRTFA MIRASAGLELIFPGRQLHSCA+KAGVGQDIFV CALIDMYSKCGSLEDAHCVFD
Sbjct: 243 PRTFAIMIRASAGLELIFPGRQLHSCAIKAGVGQDIFVSCALIDMYSKCGSLEDAHCVFD 302

Query: 301 EMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTR 360
           EMP+KT+VGWNSIIAGYALHGYSEEALDL YEMRDSG++MDHFTFSIIIRICSRLASV R
Sbjct: 303 EMPDKTIVGWNSIIAGYALHGYSEEALDLCYEMRDSGIKMDHFTFSIIIRICSRLASVAR 362

Query: 361 AKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGN 420
           AKQ HA LVRNGFGLD VANTALVDFYSKWGK+DDARH+FDRMS+KN+ISWNALIAGYGN
Sbjct: 363 AKQVHAGLVRNGFGLDVVANTALVDFYSKWGKIDDARHIFDRMSHKNIISWNALIAGYGN 422

Query: 421 HGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAM 480
           HGRGEEAI+MFERMLREGM PNHVTFLAVLSACSISGLFERGWE FQS+  DHK+KPRAM
Sbjct: 423 HGRGEEAIQMFERMLREGMTPNHVTFLAVLSACSISGLFERGWEIFQSITTDHKIKPRAM 482

Query: 481 HYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGM 540
           H+A MIELLGREGLLDEAYALI  APF+PTANMWAALLRACRVHENLELGK AAE LYGM
Sbjct: 483 HFACMIELLGREGLLDEAYALIRNAPFKPTANMWAALLRACRVHENLELGKLAAENLYGM 542

Query: 541 EPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKH 600
           EP+KLSNYIVLLNIYNSSGKLKEAADVV+TLKRKGLRM+PACSWIE+KNQPH+FLSGDKH
Sbjct: 543 EPDKLSNYIVLLNIYNSSGKLKEAADVVQTLKRKGLRMVPACSWIEVKNQPHSFLSGDKH 602

Query: 601 HADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
           HA+IEKVV KVDE+MLKISKLGYV+E NFLLPDVDE EEK+  YHSEKLAIAYGL++T+K
Sbjct: 603 HAEIEKVVEKVDEIMLKISKLGYVAEQNFLLPDVDEKEEKIHMYHSEKLAIAYGLLSTLK 662

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           KT LQIVQSHRIC DCHS IKLIALIT+REIVVRD SRFHHFRDG+CSCGDYW
Sbjct: 663 KTPLQIVQSHRICGDCHSTIKLIALITRREIVVRDASRFHHFRDGSCSCGDYW 714

BLAST of Sed0027655.1 vs. ExPASy TrEMBL
Match: A0A0A0KXD9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G636580 PE=3 SV=1)

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 607/715 (84.90%), Postives = 652/715 (91.19%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PLSR+QNYVYD+L C     +STS FSLR+SDSD F   S L      SN RK RNS
Sbjct: 3   MELPLSRYQNYVYDRLQC-----NSTSFFSLRYSDSDLFTKTSFL------SNPRKYRNS 62

Query: 61  FCWVKCSSLEQGL--RPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKK 120
           FCW+KCSS EQGL  RPRP+PKPSK+D+G RK T  K+TH++KS VGICSQIEKLVLCKK
Sbjct: 63  FCWIKCSSFEQGLRPRPRPQPKPSKLDVGDRKETPLKETHVKKSSVGICSQIEKLVLCKK 122

Query: 121 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 180
           YRDALEMFEIFE+E G+ +G ST+DALINACIGLKSIRGVKRLC+YM+DNGFE DQYMRN
Sbjct: 123 YRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 182

Query: 181 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 240
           RVLLMHVKCGMMIDA RLFDEM  RNAVSW TIISGYVDSGNY EAFRLF++M EE+ DC
Sbjct: 183 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 242

Query: 241 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 300
           GPRTFATMIRASAGLE+IFPGRQLHSCA+KAG+GQDIFV CALIDMYSKCGSLEDAHCVF
Sbjct: 243 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 302

Query: 301 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 360
           DEMP+KT+VGWNSIIAGYALHGYSEEALDL +EMRDSGV+MDHFTFSIIIRICSRLASV 
Sbjct: 303 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 362

Query: 361 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 420
           RAKQ HASLVRNGFGLD VANTALVDFYSKWGKVDDARHVFDRMS +N+ISWNALIAGYG
Sbjct: 363 RAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG 422

Query: 421 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 480
           NHG GEEAI+MFE+MLREGMMPNHVTFLAVLSACSISGLFERGWE FQSM RDHKVKPRA
Sbjct: 423 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 482

Query: 481 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 540
           MH+A MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVH NLELGKFAAEKLYG
Sbjct: 483 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 542

Query: 541 MEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDK 600
           MEPEKLSNYIVLLNIYNSSGKLKEAADV +TLKRKGLRMLPACSWIE+ NQPHAFLSGDK
Sbjct: 543 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 602

Query: 601 HHADIEKVVAKVDELMLKISKLGYV-SEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINT 660
           HH  IEKVV KVDELML ISKLGYV  E NF+LPDVDE+EEK++ YHSEKLAIAYGL+NT
Sbjct: 603 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMYHSEKLAIAYGLLNT 662

Query: 661 VKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           ++KT LQIVQSHRICSDCHSVIKLIA+ITKREIV+RD SRFHHFRDG+CSCGDYW
Sbjct: 663 LEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706

BLAST of Sed0027655.1 vs. ExPASy TrEMBL
Match: A0A1S3C9W7 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498490 PE=3 SV=1)

HSP 1 Score: 1242.6 bits (3214), Expect = 0.0e+00
Identity = 604/713 (84.71%), Postives = 650/713 (91.16%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PLSR+QNYVYD+L C      ST +FSLR+SDS  F   S L      SNRRK RNS
Sbjct: 3   MELPLSRYQNYVYDRLQC-----YSTPYFSLRYSDSHLFMKTSFL------SNRRKCRNS 62

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYR 120
           FCWVKCSS EQGLRPRP+PKPSK+D+G RK    K+T +RKS VGICSQIEKLVLCK+YR
Sbjct: 63  FCWVKCSSFEQGLRPRPQPKPSKLDVGVRKEAPLKETPVRKSSVGICSQIEKLVLCKQYR 122

Query: 121 DALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRV 180
           DALEMFEIFE+E G+ +GNST+DALINACIGLKSIRGVKRL +YM+DNGFE DQYMRNRV
Sbjct: 123 DALEMFEIFELEDGFHVGNSTYDALINACIGLKSIRGVKRLFNYMVDNGFEPDQYMRNRV 182

Query: 181 LLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGP 240
           LLMHVKCGMMIDA RLFDEM ERNAVSW+TIISGYVDSGNY EAFRLF++MWEE   CGP
Sbjct: 183 LLMHVKCGMMIDACRLFDEMPERNAVSWSTIISGYVDSGNYVEAFRLFILMWEESYGCGP 242

Query: 241 RTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDE 300
           RT ATMIRASAGLE+IF GRQLHSCA+KAG+GQDIFV CALIDMYSKCGSLEDAHCVFDE
Sbjct: 243 RTLATMIRASAGLEIIFVGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDE 302

Query: 301 MPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRA 360
           MP+KT+VGWNSIIAGYALHGYSEEALDL +EM  SGV+MDHFTFSIIIRICSRLASV RA
Sbjct: 303 MPDKTIVGWNSIIAGYALHGYSEEALDLYHEMCRSGVKMDHFTFSIIIRICSRLASVARA 362

Query: 361 KQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNH 420
           KQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARHVFDRMS +N+ISWNALIAGYGNH
Sbjct: 363 KQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNVISWNALIAGYGNH 422

Query: 421 GRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMH 480
           GRGEEAI+MFE+MLREGMMPNHVTFLAVLSACSISGLFERGWE FQSM RDHKV+PRAMH
Sbjct: 423 GRGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVRPRAMH 482

Query: 481 YASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGME 540
           +A MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVH NLELGKFAAEKLYGME
Sbjct: 483 FACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGME 542

Query: 541 PEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHH 600
           PEKLSNYIVLLNIYN+SGKLKEAADVV+TLKRKGLRMLPACSWIE+ NQPHAFLSGDKHH
Sbjct: 543 PEKLSNYIVLLNIYNTSGKLKEAADVVQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHH 602

Query: 601 ADIEKVVAKVDELMLKISKLGYV-SEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
             +EKVV KVDELMLKISKLGYV  E NF+LPDVDEHEEK++ YHSEKLAIAYGL+NT++
Sbjct: 603 VQLEKVVGKVDELMLKISKLGYVPEEQNFMLPDVDEHEEKIRMYHSEKLAIAYGLLNTLE 662

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           +T LQIVQSHRICSDCHSVIKLIA+ITKREIV+RD SRFHHFRDGNCSCGDYW
Sbjct: 663 RTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGNCSCGDYW 704

BLAST of Sed0027655.1 vs. ExPASy TrEMBL
Match: A0A6J1JGW0 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486894 PE=3 SV=1)

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 604/712 (84.83%), Postives = 648/712 (91.01%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PL  +QNYV+D L  T   SSSTS+FS  FS S+ FR++SLLS +SL SNRRKLRNS
Sbjct: 1   MEVPL--YQNYVHDHLRRT-SLSSSTSYFSHHFSGSELFRDRSLLSAYSLWSNRRKLRNS 60

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYR 120
           FCWVKCSSLEQGLRPR +PKPSK+D   RKGT SK+T I KS V IC  IEKLVLC K+R
Sbjct: 61  FCWVKCSSLEQGLRPRLKPKPSKVDRDVRKGTPSKETRITKSSVRICCHIEKLVLCNKFR 120

Query: 121 DALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRV 180
           DALEMFEI E+EGGYD+GNSTFDALI ACIGLKSIRG KRLC+YMIDNG E DQY+ NR+
Sbjct: 121 DALEMFEILELEGGYDVGNSTFDALIIACIGLKSIRGAKRLCAYMIDNGIEPDQYIMNRI 180

Query: 181 LLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGP 240
           LLMHV+CGMMIDA +LFDEM ERNAVSWNTIISGYVDSGNY EAFRLF+MMWEEY  C P
Sbjct: 181 LLMHVRCGMMIDASKLFDEMPERNAVSWNTIISGYVDSGNYKEAFRLFIMMWEEYPGCSP 240

Query: 241 RTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDE 300
           RTFAT+IRASAGLELIFPG+QLHSCAVKAGVGQDIFV CALIDMYSKCG LEDAHCVFDE
Sbjct: 241 RTFATVIRASAGLELIFPGKQLHSCAVKAGVGQDIFVSCALIDMYSKCGGLEDAHCVFDE 300

Query: 301 MPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRA 360
           MP+KT+VGWNSIIAGYALHG+SEEAL+L ++MRDSGV++DHFTFSIIIRICSRLASVTRA
Sbjct: 301 MPDKTIVGWNSIIAGYALHGHSEEALNLYFQMRDSGVKIDHFTFSIIIRICSRLASVTRA 360

Query: 361 KQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNH 420
           KQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARH+FDRMS KNLISWNALIAGYGNH
Sbjct: 361 KQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHIFDRMSCKNLISWNALIAGYGNH 420

Query: 421 GRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMH 480
           GRGEEAIE+FERMLREGM+PNHVTFLAVLSACSISGLFERGWE FQSM RDHK+K RAMH
Sbjct: 421 GRGEEAIEIFERMLREGMVPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKIKLRAMH 480

Query: 481 YASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGME 540
           Y  MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVHENLELGK+AAEKLYGME
Sbjct: 481 YTCMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHENLELGKYAAEKLYGME 540

Query: 541 PEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHH 600
           PEKL NYIVLLNIY SSGKLKEAADVVRTLKRKGL MLPACSWIE+K+QPHAFLSGDKHH
Sbjct: 541 PEKLRNYIVLLNIYKSSGKLKEAADVVRTLKRKGLSMLPACSWIEVKHQPHAFLSGDKHH 600

Query: 601 ADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVKK 660
            +IEKVV KVDELML+ISKLGYV E N LLPDVD HEEK+Q YHSEKLAIAYGLINT+K+
Sbjct: 601 PEIEKVVEKVDELMLEISKLGYVPEQNILLPDVD-HEEKIQIYHSEKLAIAYGLINTLKQ 660

Query: 661 TALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           T LQIVQ HR+C DCHSVIKLIA+ITKREIVVRD SRFHHFRDG CSCGDYW
Sbjct: 661 TPLQIVQGHRVCGDCHSVIKLIAMITKREIVVRDASRFHHFRDGRCSCGDYW 708

BLAST of Sed0027655.1 vs. ExPASy TrEMBL
Match: A0A6J1GSZ5 (pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457149 PE=3 SV=1)

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 600/713 (84.15%), Postives = 643/713 (90.18%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           ME+PL  +QNYV+D L  T   SSSTS+FS  FS S+ FR++SLLS +SL SN RKLRNS
Sbjct: 1   MEVPL--YQNYVHDHLQRT-SLSSSTSYFSHHFSGSELFRDRSLLSAYSLWSNGRKLRNS 60

Query: 61  FCWVKCSSLEQGLRPRPEPKPSKIDLGFRKGT-SSKKTHIRKSGVGICSQIEKLVLCKKY 120
           FCWVKCSSLEQGLRPR +PKPSK++   RKGT  SK+T I KS V IC  IEKLVLC K+
Sbjct: 61  FCWVKCSSLEQGLRPRLKPKPSKVERDVRKGTPPSKETRITKSSVRICCHIEKLVLCNKF 120

Query: 121 RDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNR 180
           RDALEMFEI E+EGGYD+GNSTFDALINACIGLKSIRG KRLC+YMIDNG E DQY+ NR
Sbjct: 121 RDALEMFEILELEGGYDVGNSTFDALINACIGLKSIRGAKRLCAYMIDNGIEPDQYIMNR 180

Query: 181 VLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCG 240
           +LLMHV+CGMMIDA +LFDEM ERNAVSWNTIISGYVDSGNY EAFRLF+MMWEEY  C 
Sbjct: 181 ILLMHVRCGMMIDASKLFDEMPERNAVSWNTIISGYVDSGNYKEAFRLFIMMWEEYPGCS 240

Query: 241 PRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFD 300
           PRTFAT+IRASAGLELIFPGRQLHSCAVKAGVGQDIFV CALIDMYSKCG LEDAHCVFD
Sbjct: 241 PRTFATVIRASAGLELIFPGRQLHSCAVKAGVGQDIFVSCALIDMYSKCGGLEDAHCVFD 300

Query: 301 EMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTR 360
           EMP+KT+VGWNSIIAGYALHGYSEEAL+L Y+MRDSGV++DHFTFSIIIRICSRLASVTR
Sbjct: 301 EMPDKTIVGWNSIIAGYALHGYSEEALNLYYQMRDSGVKIDHFTFSIIIRICSRLASVTR 360

Query: 361 AKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGN 420
           AKQAHASLVRNGFGLD VANTALVDFYSKWGKVDDARH+FDRMS KNLISWNALIAGYGN
Sbjct: 361 AKQAHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHIFDRMSCKNLISWNALIAGYGN 420

Query: 421 HGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAM 480
           HGRGEEAIE+FERMLREGM+PNHVTFLAVLSACSISGLFERGWE FQS+ RDHK+K RAM
Sbjct: 421 HGRGEEAIEIFERMLREGMVPNHVTFLAVLSACSISGLFERGWEIFQSVTRDHKMKLRAM 480

Query: 481 HYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGM 540
           HY  MIELLGREGLLDEAYALI KAPFQPTANMWAALLRACRVHENLELGK+ AEKLYGM
Sbjct: 481 HYTCMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHENLELGKYVAEKLYGM 540

Query: 541 EPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKH 600
           EPEKL NYIVLLNIY SSGKLKEAADVV+TLKRKGL MLPACSWIE+K+QPHAF SGDK 
Sbjct: 541 EPEKLRNYIVLLNIYKSSGKLKEAADVVQTLKRKGLSMLPACSWIEVKHQPHAFQSGDKR 600

Query: 601 HADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQTYHSEKLAIAYGLINTVK 660
           H +IEKVV KVDELML+ISKLGYV E N LLPDVD HEEK+Q YHSEKLAIAYGLINT+ 
Sbjct: 601 HPEIEKVVEKVDELMLEISKLGYVPERNILLPDVD-HEEKIQIYHSEKLAIAYGLINTLN 660

Query: 661 KTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
            T LQIVQ HR+C DCHSVIKLIA+ITKREIVVRD SRFHHFRDG CSCGDYW
Sbjct: 661 HTPLQIVQGHRVCGDCHSVIKLIAMITKREIVVRDASRFHHFRDGRCSCGDYW 709

BLAST of Sed0027655.1 vs. TAIR 10
Match: AT5G50390.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 862.4 bits (2227), Expect = 2.5e-250
Identity = 428/719 (59.53%), Postives = 535/719 (74.41%), Query Frame = 0

Query: 1   MEIPLSRFQNYVYDQLHCTIPTSSSTSHFSLRFSDSDHFRNKSLLSGFSLCSNRRKLRNS 60
           MEIPLSR+Q+   D++       SS++   L F              FSL    R+ +N 
Sbjct: 1   MEIPLSRYQSIRLDEIR-----DSSSNPKVLTFPRK-----------FSL--RGRRWKNP 60

Query: 61  FCWVKCSSLEQGLRPRP--EPKPSKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKK 120
           F  + CSS+ QGL+P+P  +P+P +I++   K      T I KSGV ICSQIEKLVLC +
Sbjct: 61  FGRLSCSSVVQGLKPKPKLKPEPIRIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNR 120

Query: 121 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 180
           +R+A E+FEI E+   + +G ST+DAL+ ACI LKSIR VKR+  +M+ NGFE +QYM N
Sbjct: 121 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 180

Query: 181 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 240
           R+LLMHVKCGM+IDA RLFDE+ ERN  S+ +IISG+V+ GNY EAF LF MMWEE SDC
Sbjct: 181 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 240

Query: 241 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 300
              TFA M+RASAGL  I+ G+QLH CA+K GV  + FV C LIDMYSKCG +EDA C F
Sbjct: 241 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 300

Query: 301 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 360
           + MPEKT V WN++IAGYALHGYSEEAL L+Y+MRDSGV +D FT SI+IRI ++LA + 
Sbjct: 301 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 360

Query: 361 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 420
             KQAHASL+RNGF  + VANTALVDFYSKWG+VD AR+VFD++  KN+ISWNAL+ GY 
Sbjct: 361 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYA 420

Query: 421 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 480
           NHGRG +A+++FE+M+   + PNHVTFLAVLSAC+ SGL E+GWE F SM+  H +KPRA
Sbjct: 421 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA 480

Query: 481 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 540
           MHYA MIELLGR+GLLDEA A I +AP + T NMWAALL ACR+ ENLELG+  AEKLYG
Sbjct: 481 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 540

Query: 541 MEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDK 600
           M PEKL NY+V+ N+YNS GK  EAA V+ TL+ KGL M+PAC+W+E+ +Q H+FLSGD+
Sbjct: 541 MGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDR 600

Query: 601 HHADIE----KVVAKVDELMLKISKLGYVSEPNFLLPDVDE-HEEKMQTYHSEKLAIAYG 660
             +  E    ++  KVDELM +IS+ GY  E   LLPDVDE  EE++  YHSEKLAIAYG
Sbjct: 601 FDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYG 660

Query: 661 LINTVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           L+NT +   LQI Q+HRIC +CH V++ I+L+T RE+VVRD SRFHHF++G CSCG YW
Sbjct: 661 LVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701

BLAST of Sed0027655.1 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 466.8 bits (1200), Expect = 3.0e-131
Identity = 229/611 (37.48%), Postives = 364/611 (59.57%), Query Frame = 0

Query: 139 NSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVK---CGMMIDAGR 198
           ++ F +++ +C  +  +R  + +  +++  G + D Y  N ++ M+ K    G  I  G 
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164

Query: 199 LFDEMSER---------------------------------NAVSWNTIISGYVDSGNYG 258
           +FDEM +R                                 + VS+NTII+GY  SG Y 
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224

Query: 259 EAFRLFVMMWEEYSDCGPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALI 318
           +A R+   M          T ++++   +    +  G+++H   ++ G+  D+++  +L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284

Query: 319 DMYSKCGSLEDAHCVFDEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHF 378
           DMY+K   +ED+  VF  +  +  + WNS++AGY  +G   EAL L  +M  + V+    
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344

Query: 379 TFSIIIRICSRLASVTRAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRM 438
            FS +I  C+ LA++   KQ H  ++R GFG +    +ALVD YSK G +  AR +FDRM
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404

Query: 439 SYKNLISWNALIAGYGNHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGW 498
           +  + +SW A+I G+  HG G EA+ +FE M R+G+ PN V F+AVL+ACS  GL +  W
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 499 EYFQSMARDHKVKPRAMHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRV 558
            YF SM + + +     HYA++ +LLGR G L+EAY  I K   +PT ++W+ LL +C V
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524

Query: 559 HENLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACS 618
           H+NLEL +  AEK++ ++ E +  Y+++ N+Y S+G+ KE A +   +++KGLR  PACS
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584

Query: 619 WIEIKNQPHAFLSGDKHHADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVD-EHEEKMQ 678
           WIE+KN+ H F+SGD+ H  ++K+   +  +M ++ K GYV++ + +L DVD EH+ ++ 
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELL 644

Query: 679 TYHSEKLAIAYGLINTVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHF 713
             HSE+LA+A+G+INT   T +++ ++ RIC+DCH  IK I+ IT+REI+VRD SRFHHF
Sbjct: 645 FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHF 704

BLAST of Sed0027655.1 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-127
Identity = 217/578 (37.54%), Postives = 358/578 (61.94%), Query Frame = 0

Query: 130 EMEGGYDIGNSTF-DALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVKCG 189
           ++EG Y   +  F + L+  C   K +   + + ++++ + F  D  M N +L M+ KCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 190 MMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGPRTFATMIR 249
            + +A ++F++M +R+ V+W T+ISGY       +A   F  M          T +++I+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 250 ASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDEMPEKTVVG 309
           A+A       G QLH   VK G   ++ V  AL+D+Y++ G ++DA  VFD +  +  V 
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 310 WNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRAKQAHASLV 369
           WN++IAG+A    +E+AL+L   M   G +  HF+++ +   CS    + + K  HA ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 370 RNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNHGRGEEAIE 429
           ++G  L A A   L+D Y+K G + DAR +FDR++ ++++SWN+L+  Y  HG G+EA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 430 MFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMHYASMIELL 489
            FE M R G+ PN ++FL+VL+ACS SGL + GW Y++ M +D  + P A HY ++++LL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 409

Query: 490 GREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGMEPEKLSNYI 549
           GR G L+ A   I + P +PTA +W ALL ACR+H+N ELG +AAE ++ ++P+    ++
Sbjct: 410 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 469

Query: 550 VLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHHADIEKVVA 609
           +L NIY S G+  +AA V + +K  G++  PACSW+EI+N  H F++ D+ H   E++  
Sbjct: 470 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 529

Query: 610 KVDELMLKISKLGYVSEPNFLLPDVDEHEEKMQ-TYHSEKLAIAYGLINTVKKTALQIVQ 669
           K +E++ KI +LGYV + + ++  VD+ E ++   YHSEK+A+A+ L+NT   + + I +
Sbjct: 530 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 589

Query: 670 SHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGN 706
           + R+C DCH+ IKL + +  REI+VRD +RFHHF+D +
Sbjct: 590 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626

BLAST of Sed0027655.1 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 451.8 bits (1161), Expect = 1.0e-126
Identity = 230/632 (36.39%), Postives = 373/632 (59.02%), Query Frame = 0

Query: 82  SKIDLGFRKGTSSKKTHIRKSGVGICSQIEKLVLCKKYRDALEMFEIFEMEGGYDIGNST 141
           SKI L FR   + + ++       + S+  +L   +    A++  +  +  G +   ++T
Sbjct: 6   SKIKL-FRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLW-ADSAT 65

Query: 142 FDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRNRVLLMHVKCGMMIDAGRLFDEMS 201
           +  LI  CI  +++     +C ++  NG     ++ N ++ M+VK  ++ DA +LFD+M 
Sbjct: 66  YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 125

Query: 202 ERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDCGPRTFATMIRASAGLELIFPGRQ 261
           +RN +SW T+IS Y     + +A  L V+M  +       T+++++R+  G+  +   R 
Sbjct: 126 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RM 185

Query: 262 LHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVFDEMPEKTVVGWNSIIAGYALHGY 321
           LH   +K G+  D+FV  ALID+++K G  EDA  VFDEM     + WNSII G+A +  
Sbjct: 186 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 245

Query: 322 SEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVTRAKQAHASLVRNGFGLDAVANTA 381
           S+ AL+L   M+ +G   +  T + ++R C+ LA +    QAH  +V+  +  D + N A
Sbjct: 246 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 305

Query: 382 LVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYGNHGRGEEAIEMFERMLREGMMPN 441
           LVD Y K G ++DA  VF++M  +++I+W+ +I+G   +G  +EA+++FERM   G  PN
Sbjct: 306 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 365

Query: 442 HVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRAMHYASMIELLGREGLLDEAYALI 501
           ++T + VL ACS +GL E GW YF+SM + + + P   HY  MI+LLG+ G LD+A  L+
Sbjct: 366 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 425

Query: 502 GKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLK 561
            +   +P A  W  LL ACRV  N+ L ++AA+K+  ++PE    Y +L NIY +S K  
Sbjct: 426 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 485

Query: 562 EAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGDKHHADIEKVVAKVDELMLKISKLG 621
              ++   ++ +G++  P CSWIE+  Q HAF+ GD  H  I +V  K+++L+ +++ +G
Sbjct: 486 SVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIG 545

Query: 622 YVSEPNFLLPDVD-EHEEKMQTYHSEKLAIAYGLINTVKKTALQIVQSHRICSDCHSVIK 681
           YV E NF+L D++ E  E    +HSEKLA+A+GL+    +  ++I ++ RIC DCH   K
Sbjct: 546 YVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCK 605

Query: 682 LIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           L + +  R IV+RD  R+HHF+DG CSCGDYW
Sbjct: 606 LASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of Sed0027655.1 vs. TAIR 10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-125
Identity = 222/596 (37.25%), Postives = 360/596 (60.40%), Query Frame = 0

Query: 119 YRDALEMFEIFEMEGGYDIGNSTFDALINACIGLKSIRGVKRLCSYMIDNGFELDQYMRN 178
           Y +++ +F +   + G+   + TF  ++ A +GL      ++L +  +  GF  D  + N
Sbjct: 231 YTESIHLF-LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 290

Query: 179 RVLLMHVKCGMMIDAGRLFDEMSERNAVSWNTIISGYVDSGNYGEAFRLFVMMWEEYSDC 238
           ++L  + K   +++   LFDEM E + VS+N +IS Y  +  Y  +   F  M     D 
Sbjct: 291 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 350

Query: 239 GPRTFATMIRASAGLELIFPGRQLHSCAVKAGVGQDIFVLCALIDMYSKCGSLEDAHCVF 298
               FATM+  +A L  +  GRQLH  A+ A     + V  +L+DMY+KC   E+A  +F
Sbjct: 351 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 410

Query: 299 DEMPEKTVVGWNSIIAGYALHGYSEEALDLVYEMRDSGVQMDHFTFSIIIRICSRLASVT 358
             +P++T V W ++I+GY   G     L L  +MR S ++ D  TF+ +++  +  AS+ 
Sbjct: 411 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 470

Query: 359 RAKQAHASLVRNGFGLDAVANTALVDFYSKWGKVDDARHVFDRMSYKNLISWNALIAGYG 418
             KQ HA ++R+G   +  + + LVD Y+K G + DA  VF+ M  +N +SWNALI+ + 
Sbjct: 471 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 530

Query: 419 NHGRGEEAIEMFERMLREGMMPNHVTFLAVLSACSISGLFERGWEYFQSMARDHKVKPRA 478
           ++G GE AI  F +M+  G+ P+ V+ L VL+ACS  G  E+G EYFQ+M+  + + P+ 
Sbjct: 531 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 590

Query: 479 MHYASMIELLGREGLLDEAYALIGKAPFQPTANMWAALLRACRVHENLELGKFAAEKLYG 538
            HYA M++LLGR G   EA  L+ + PF+P   MW+++L ACR+H+N  L + AAEKL+ 
Sbjct: 591 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 650

Query: 539 MEP-EKLSNYIVLLNIYNSSGKLKEAADVVRTLKRKGLRMLPACSWIEIKNQPHAFLSGD 598
           ME     + Y+ + NIY ++G+ ++  DV + ++ +G++ +PA SW+E+ ++ H F S D
Sbjct: 651 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 710

Query: 599 KHHADIEKVVAKVDELMLKISKLGYVSEPNFLLPDVDEHEE-KMQTYHSEKLAIAYGLIN 658
           + H + +++V K++EL  +I + GY  + + ++ DVDE  + +   YHSE+LA+A+ LI+
Sbjct: 711 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 770

Query: 659 TVKKTALQIVQSHRICSDCHSVIKLIALITKREIVVRDGSRFHHFRDGNCSCGDYW 713
           T +   + ++++ R C DCH+ IKLI+ I KREI VRD SRFHHF +G CSCGDYW
Sbjct: 771 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022133879.10.0e+0086.40pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Momordica ... [more]
XP_004148701.10.0e+0084.90pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 ... [more]
XP_008459324.10.0e+0084.71PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic ... [more]
XP_022989822.10.0e+0084.83pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Cucurbita ... [more]
XP_038890388.10.0e+0084.29pentatricopeptide repeat-containing protein At5g50390, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
Q9FK333.5e-24959.53Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidop... [more]
Q9LIQ79.1e-13338.46Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
Q9LW634.2e-13037.48Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Q9SI531.4e-12536.39Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q9S7F41.6e-12437.25Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1BWH30.0e+0086.40pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Momordic... [more]
A0A0A0KXD90.0e+0084.90DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6365... [more]
A0A1S3C9W70.0e+0084.71pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucumis ... [more]
A0A6J1JGW00.0e+0084.83pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucurbit... [more]
A0A6J1GSZ50.0e+0084.15pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT5G50390.12.5e-25059.53Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G23330.13.0e-13137.48Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G24000.11.5e-12737.54Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G03880.11.0e-12636.39Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02010.11.1e-12537.25Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..365
e-value: 1.2E-23
score: 85.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 105..257
e-value: 4.0E-23
score: 84.2
coord: 424..681
e-value: 4.0E-26
score: 94.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 481..502
e-value: 0.61
score: 10.5
coord: 547..575
e-value: 1.0
score: 9.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 304..351
e-value: 1.1E-11
score: 44.7
coord: 204..249
e-value: 1.7E-7
score: 31.3
coord: 405..452
e-value: 6.7E-12
score: 45.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 206..233
e-value: 7.8E-6
score: 23.7
coord: 279..304
e-value: 2.3E-4
score: 19.2
coord: 408..441
e-value: 3.7E-9
score: 34.2
coord: 380..402
e-value: 9.9E-4
score: 17.1
coord: 309..340
e-value: 1.1E-5
score: 23.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..304
score: 9.284279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 305..339
score: 10.424253
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..234
score: 9.97484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 406..440
score: 13.482456
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 580..702
e-value: 3.4E-34
score: 117.5
NoneNo IPR availablePANTHERPTHR47924:SF36SUBFAMILY NOT NAMEDcoord: 1..706
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..706

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0027655Sed0027655gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027655.1-exonSed0027655.1-exon-LG11:34230251..34232389exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027655.1-cdsSed0027655.1-cds-LG11:34230251..34232389CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0027655.1Sed0027655.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding