Sed0027137.1 (mRNA) Chayote v1

Overview
NameSed0027137.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
LocationLG09: 32948466 .. 32950584 (-)
Sequence length632
RNA-Seq ExpressionSed0027137.1
SyntenySed0027137.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATCACCAACTATTAATATTACACCACAAAATCCCAAACCAAGCCCCCCCAAAGAAAAAAAACTTTTATTTTACTCTTCCTTTTCTCTTCCATTTCCATTCTACAAAATATTCCTTTTCTTTCTTATCCTCTCTTTTCTAATGGCAAAAGCTGCAAAGCCAGTTTCAGTCCTAACCCTAATTTTGTTCTCTTTTTTCTCAACAATGGCAGTACAAGGTCTCTTTAATTTTCTTCTCCCCATTTTAGGCTTTTTCTTCTCTTCACTTTTACCTCATTAATTCTTTTCTCCATATTTTTTGTTGGGTTTCAGGAATGTTAATCTCAGTTGGAGATGAGATTTTGGCTAAGTTACCGCCTCAATTCTTTTCTGTACAAACAACAATCGCACCCGAGGTTAGTCGTTGGCTAAACGAGCTATTTGTCACATATGAACATTATATCCTTTTTCGAATTTGGATATTGTTTCTCATTTTTTATTTCTTATTTCTTGTTTTTCTTACTAGTTTTATCTTTGTCTCTTTAAATTACAATGGTATATTAATGGTTGAACTTTTACTCAGAGTTGGTTAACTTTGCCTTAAAAACTATTTTAGTGCATGCATAATTATTTTTCAAAAAGACTTAAAAAACTTGATATAGATATTTCTTTTTCATTTTCTTTTTTTTTTGTGAATGAAAGTCTGTTTGTTTAGTTTGGATGGAAGATTATCGTGCATGCATTTATATCGATTGAATTATTTATGTTAATTAATATAAATATATGTGAATAATGAACAAATTTAGCAAAAACTATCGATAGTTGAATATATAATAAACACTTTTTAAAACTAAAACTTCTTTCCACAAATTTTTTGAATTCAACTAAATTGGGGGAGTGTGATTTAAATCTATGACGAAACATGTCGCTAGCTACTGCTTTTGTTGGTAACTTTTCGAAAAAACTAAAACTTGATAATCGACACTCTTTTTTCTTTTTTTTCCTTTTTTTTTTAAATTTTTCGGAGACATTTAACGACAATATGGATTATGAACAGATGTCTAAAGTCACCTATATCATATAATGGGTGATTAAGTTTTGTAAATATATTAAGTTCTTTTAATGATAAATTAAAAAAAATAAAATAAAAAATAACCTGAGGAATAATTTTATTTTCTCTTTCCTAAAAAAAATCGATGACAAACAAAATAATGGCAAGTAAAGAAATAAGCATTAAATTAAAACAAATAGTTCTTTTCTGAACAATAAAAAACAAATAGTTTTATCCTTGAAATTTGGTCTTTCACGTTGAATACTTCAGTTTTCTTTATAGAAAAAACAAAAATATACAATTAAGAATCTTATTCTTCAACTTTATATATATATATATATATATATATATATATATATATATATATATATATATTTACGCCTACTTCAACATAACATAATTATATATAGTTTTAGTAACCTTTCTTAAAAATATTTTAGACCAATATTTTTTTGGTGTGTTTAACAATAATTTGGCTGATGATTTAACTCTCTATGACTTTTTTTTTTTAGTTTAACTGGGTGAAAGATTCAAATATACGACATTTTGATAGTATTGAATTATATTTATATCATTGTATTATCATTTTATTGGCGATTTTATGACCTCTTGGTCATTTACATATATTTATGTCAATTGAATTATATCTTCGTTGACTTAAACCTATATATTTTTCTCTTTTGAATTCACCAATATTTTAAAGAAATTAAAAAAAAAAAAAATCTGATAGTGTCTTTCATTCAAATTTGAAACTTCAGGTGAAAAATAGAAAGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTTATAATGAATGTAGAGGCTGCAAATACAAGTGCAGAGCTGAGCAAGTGCCAGTTGAAGGCAATGACCCTATTAATAGTGCTTATCATTATAAATGTGTTTGTCATTGGTAATAATTTCACTCTAATTAATTTATCACCCAAAAAATTGTTCTTTGTTTTTGTTCTTTCAAAGACAATTTGAGAGGCTAGATTTTAATCAATCTTGTTCTTCTACCTCAGTAGTTTATTTTGCTAGAGTTACATAAATTTTCGTGTTTTTTTCGATA

mRNA sequence

CCATCACCAACTATTAATATTACACCACAAAATCCCAAACCAAGCCCCCCCAAAGAAAAAAAACTTTTATTTTACTCTTCCTTTTCTCTTCCATTTCCATTCTACAAAATATTCCTTTTCTTTCTTATCCTCTCTTTTCTAATGGCAAAAGCTGCAAAGCCAGTTTCAGTCCTAACCCTAATTTTGTTCTCTTTTTTCTCAACAATGGCAGTACAAGGAATGTTAATCTCAGTTGGAGATGAGATTTTGGCTAAGTTACCGCCTCAATTCTTTTCTGTACAAACAACAATCGCACCCGAGGTGAAAAATAGAAAGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTTATAATGAATGTAGAGGCTGCAAATACAAGTGCAGAGCTGAGCAAGTGCCAGTTGAAGGCAATGACCCTATTAATAGTGCTTATCATTATAAATGTGTTTGTCATTGGTAATAATTTCACTCTAATTAATTTATCACCCAAAAAATTGTTCTTTGTTTTTGTTCTTTCAAAGACAATTTGAGAGGCTAGATTTTAATCAATCTTGTTCTTCTACCTCAGTAGTTTATTTTGCTAGAGTTACATAAATTTTCGTGTTTTTTTCGATA

Coding sequence (CDS)

ATGGCAAAAGCTGCAAAGCCAGTTTCAGTCCTAACCCTAATTTTGTTCTCTTTTTTCTCAACAATGGCAGTACAAGGAATGTTAATCTCAGTTGGAGATGAGATTTTGGCTAAGTTACCGCCTCAATTCTTTTCTGTACAAACAACAATCGCACCCGAGGTGAAAAATAGAAAGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTTATAATGAATGTAGAGGCTGCAAATACAAGTGCAGAGCTGAGCAAGTGCCAGTTGAAGGCAATGACCCTATTAATAGTGCTTATCATTATAAATGTGTTTGTCATTGGTAA

Protein sequence

MAKAAKPVSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKNRKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCHW
Homology
[Close]
BLAST of Sed0027137.1 vs. NCBI nr
Match: XP_038899071.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 2.8e-38
Identity = 86/114 (75.44%), Postives = 91/114 (79.82%), Query Frame = 0 

Query: 1   MAKAAKPVSV----LTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKN 60
           MAKAAKPVSV    LTLI+   FSTMAVQG           + PPQFFS+Q TIA E KN
Sbjct: 1   MAKAAKPVSVLLLLLTLIMTFLFSTMAVQG--------FSTRHPPQFFSLQATIASEGKN 60

Query: 61  RKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
            K+RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  EKMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 106

[Close]
BLAST of Sed0027137.1 vs. NCBI nr
Match: XP_023514879.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 84/113 (74.34%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 1   MAKAAKP---VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKNR 60
           MAKAAKP   + +L LIL S  STMA++G   S  DE+ AK  PQF SVQTTIAPE    
Sbjct: 1   MAKAAKPLLLLLLLALILCSLCSTMALKGR-FSTEDELFAKPLPQFRSVQTTIAPE---- 60

Query: 61  KLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
            +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  -MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 107

[Close]
BLAST of Sed0027137.1 vs. NCBI nr
Match: KAG6593029.1 (EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-35
Identity = 84/114 (73.68%), Postives = 91/114 (79.82%), Query Frame = 0 

Query: 1   MAKAAKP----VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKN 60
           MAKAAKP    + +L LIL S  STMA++G   S  DE+ AK  PQF SVQTTIAPE   
Sbjct: 1   MAKAAKPLLLLLLLLALILCSLCSTMALKGR-FSTEDELFAKPLPQFRSVQTTIAPE--- 60

Query: 61  RKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
             +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  --MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 108

[Close]
BLAST of Sed0027137.1 vs. NCBI nr
Match: XP_023004190.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita maxima])

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-35
Identity = 83/113 (73.45%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 1   MAKAAKP---VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKNR 60
           MAKAAKP   + +L LIL S  STMA++G   S  D++ AK  PQF SVQTTIAPE    
Sbjct: 1   MAKAAKPLLLLLLLALILCSLCSTMALKGR-FSTEDDVFAKSLPQFRSVQTTIAPE---- 60

Query: 61  KLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
            +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  -MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 107

[Close]
BLAST of Sed0027137.1 vs. NCBI nr
Match: XP_022959844.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 3.8e-35
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 0 

Query: 1   MAKAAKP-----VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVK 60
           MAKAAKP     + +L LIL S  STMA++G   S  DE+ AK  PQF SVQTTIAPE  
Sbjct: 1   MAKAAKPLLRLLLLLLALILCSLCSTMALKGR-FSTEDELFAKPLPQFRSVQTTIAPE-- 60

Query: 61  NRKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
              +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  ---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 109

[Close]
BLAST of Sed0027137.1 vs. ExPASy Swiss-Prot
Match: Q9SV72 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EPFL9 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 45  SVQTTIAPEVKNRKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYH 104
           S++ T++   +   L + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYH
Sbjct: 36  SIENTVSLLPQVHLLNSRRRHMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYH 95

Query: 105 YKCVCH 111
           Y+CVCH
Sbjct: 96  YRCVCH 101

[Close]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match: A0A6J1KTW3 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111497591 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35
Identity = 83/113 (73.45%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 1   MAKAAKP---VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVKNR 60
           MAKAAKP   + +L LIL S  STMA++G   S  D++ AK  PQF SVQTTIAPE    
Sbjct: 1   MAKAAKPLLLLLLLALILCSLCSTMALKGR-FSTEDDVFAKSLPQFRSVQTTIAPE---- 60

Query: 61  KLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
            +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  -MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 107

[Close]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match: A0A6J1H996 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111460784 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-35
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 0 

Query: 1   MAKAAKP-----VSVLTLILFSFFSTMAVQGMLISVGDEILAKLPPQFFSVQTTIAPEVK 60
           MAKAAKP     + +L LIL S  STMA++G   S  DE+ AK  PQF SVQTTIAPE  
Sbjct: 1   MAKAAKPLLRLLLLLLALILCSLCSTMALKGR-FSTEDELFAKPLPQFRSVQTTIAPE-- 60

Query: 61  NRKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
              +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  ---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 109

[Close]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match: A0A6J1DR94 (uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023601 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.0e-33
Identity = 80/113 (70.80%), Postives = 90/113 (79.65%), Query Frame = 0 

Query: 1   MAKAAKPVSVLTLILFSFFSTMAVQGMLISVGDEILAK-LPPQFFSVQTTIAPEVKNRKL 60
           MAKAAKP SVL L+L +    +AVQG      + +LAK LPPQF SV +T+A + KN+ L
Sbjct: 1   MAKAAKPASVL-LLLLTLIIVVAVQGFTTGEDELLLAKALPPQFSSV-STMANQGKNKML 60

Query: 61  RNS--RRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
           RNS  RRLMIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  RNSRTRRLMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 111

[Close]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match: A0A0A0KA17 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucumis sativus OX=3659 GN=Csa_7G368090 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25
Identity = 63/90 (70.00%), Postives = 69/90 (76.67%), Query Frame = 0 

Query: 22  MAVQGMLISVGDEILAKLPPQFFSVQTTIAP-EVKNRKLRNSRRLMIGSTAPICTYNECR 81
           MAVQG   S  D  +    PQF S+Q TI P E +  +LR  RR+MIGSTAP CTYNECR
Sbjct: 1   MAVQG--FSTRDRPV----PQFSSLQPTILPLEGRKERLRKWRRVMIGSTAPTCTYNECR 60

Query: 82  GCKYKCRAEQVPVEGNDPINSAYHYKCVCH 111
           GCKYKCRAEQVPVEGNDPINSAYHY+CVCH
Sbjct: 61  GCKYKCRAEQVPVEGNDPINSAYHYRCVCH 84

[Close]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match: A0A1U8P9F2 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Gossypium hirsutum OX=3635 GN=LOC107956834 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.0e-25
Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 0 

Query: 8   VSVLTLILFSFF-STMAVQGMLISV---GDEILAKLPPQFFSVQTTIAPEVKNRKLRNSR 67
           +S+L LILF+FF +   +QG    V        +  PP    ++ +   E+K    +NSR
Sbjct: 6   ISLLLLILFTFFLAAHVIQGSTTQVLLPFQHQASHSPPLNLQLRASNEAEMK----KNSR 65

Query: 68  RLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCHW 112
           RLMIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCH+
Sbjct: 66  RLMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCHY 109

[Close]
BLAST of Sed0027137.1 vs. TAIR 10
Match: AT4G12970.1 (stomagen )

HSP 1 Score: 110.5 bits (275), Expect = 8.5e-25
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 45  SVQTTIAPEVKNRKLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYH 104
           S++ T++   +   L + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYH
Sbjct: 36  SIENTVSLLPQVHLLNSRRRHMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYH 95

Query: 105 YKCVCH 111
           Y+CVCH
Sbjct: 96  YRCVCH 101

The following BLAST results are available for this feature:
BLAST of Sed0027137.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899071.12.8e-3875.44EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida][more]
XP_023514879.12.2e-3574.34EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita pepo subsp. pepo][more]
KAG6593029.12.9e-3573.68EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subs... [more]
XP_023004190.12.9e-3573.45EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita maxima][more]
XP_022959844.13.8e-3573.04EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata][more]
BLAST of Sed0027137.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SV721.2e-2371.21EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of Sed0027137.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KTW31.4e-3573.45EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1H9961.9e-3573.04EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1DR945.0e-3370.80uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KA171.0e-2570.00EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucumis sativus OX=3659 GN=Csa_7G3... [more]
A0A1U8P9F23.0e-2559.26EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Gossypium hirsutum OX=3635 GN=LOC1... [more]
BLAST of Sed0027137.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G12970.18.5e-2571.21stomagen [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044858Stomagen, C-terminal domainPFAMPF16851Stomagencoord: 61..110
e-value: 1.4E-33
score: 114.6
IPR038572Stomagen, C-terminal domain superfamilyGENE3D2.20.25.390Stomagencoord: 67..111
e-value: 7.6E-31
score: 107.8
NoneNo IPR availablePANTHERPTHR37239:SF1EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 9coord: 6..110
IPR031753StomagenPANTHERPTHR37239EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 9coord: 6..110

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0027137Sed0027137gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027137.1-three_prime_utrSed0027137.1-three_prime_utr-LG09:32948466..32948620three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027137.1-exonSed0027137.1-exon-LG09:32948466..32948797exon
Sed0027137.1-exonSed0027137.1-exon-LG09:32950191..32950273exon
Sed0027137.1-exonSed0027137.1-exon-LG09:32950368..32950584exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027137.1-cdsSed0027137.1-cds-LG09:32948621..32948797CDS
Sed0027137.1-cdsSed0027137.1-cds-LG09:32950191..32950273CDS
Sed0027137.1-cdsSed0027137.1-cds-LG09:32950368..32950443CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0027137.1-five_prime_utrSed0027137.1-five_prime_utr-LG09:32950444..32950584five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0027137.1Sed0027137.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000123 positive regulation of stomatal complex development