Sed0026478.1 (mRNA) Chayote v1

Overview


Name	Sed0026478.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG07: 11140211 .. 11143504 (-)
Sequence length	2042
RNA-Seq Expression	Sed0026478.1
Synteny	Sed0026478.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCGACTGCAGGAATTAGCTGCAGTGACTGGCTGCCATTTTATTTTTCTCGGCAACCCCGTGGGTCAAATTCTGTTCTCTCCTTCTACTTTTTTCGAAAACCCCCAATCACCAAAATCACTCTGAACAAAACCCATTTCTTACCACACAAAAATCACTCCTAATTTTGAAGTAATCACCCCTGTAAGCACACACTTGTTCAAGCAAATCAAGCTTTGTTCAATGGGTTGAAAGCTTCTTTTGCTATCATTTCAGTTTTGTAATTGGGGAAAAGGGAAACTGGCCATTGCTTCAGAAACTTCTTTTCTGCATAAACTCAACCGGAAATTTTGGAACACTCCTCCACACCATTGTCCCTTCTTCTTTCTGCAATTTTGAAGTTCTTGATTCTGTCATTTTTCGATGGAGAGAACCCCAGATAAGATTTCTTCCTGTTCTTCGTCTTCTTCTTCCACGACTAACGTGAGTTTTAAGGACACTGAACTCAGGCTTGGTTTGCCTGGTTCTCAATCGCCTGGAAAGAAATTGGGAACTGGGATTTTTCTGTTTGGCCATGATTTTGAGGATAAGCAGAGTAATGGGTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGTTTTGAAGAATCTTGCTTCTGGGTCTAAGAGGGGTTTTTCTGACGCCATGGATGGGTCGAAATGGGTTTTCTCTGGGAGTAATGGATCAGAGATTAAGGCTTTAGGGGAAGGGGCTGTGTTGTTTTCGCCTAAAAGTGGGAGTAATGTTAATGCGCCACCACTTTGTGGTTCTTTGAAGCCTGTGAAGGAAGTGGTTTCTGTTAATCAATCTTCTATGCCTGTTCAGGACAAGAAGCCTGAAAATGGCGGTGCTTCTTTGGCTAAGTAAGAGAACCAATTTTCTTGTTTCTTTTCTCTTGTCTTGAAATGGTGTTTTTAGCTTAGTTTGTGTTCGTTCATTGAGTTGAATGGAAAAATTTGTTGGGGTTTCTTTGATGTTTAGATGTGTTTTGTGATGTTTCCTCTTTGTTGTTTTTGTTGCTGAAAATGGCAATTTCTTTTCTTGTTGATGCTAGCTTTGTCTTGCTATGTCTGCTTGTTTTGGTATTCTGTGTTTGTGGAAAGTTGAGATTAGAATATGCTTGGTTTCTTATAATGAAGCTTCTATCTGTAGATGTATTTATAGTACAATCATGTTTGATGATTTTGAACATGGAGATTGGCCTATTGGGAGTCTTTCCTTCCCATTGTTGGGCACATGTTCTCAAGGGTGTTCGCAGAATGTGTACGATGATGATTGCCGAAAAGAAAATCGACTTGAATAGTATGCTCTTGTGTTTGGTTGGGGATGATGTATAGGAATAGATCGGGCTCTCTTATCAGTTGCGATTTCTATTAGAATTAGTTTATCCTATATGATTTTGATATCTACTATGCATATGAAGTTCCTTCTGTTGTGAAGTTATCTTCTTACTTGAGATTAAACTTGGTAAAGGATGGAATACTGAGCATGACAATCTATGAAACACAGGGCACAGGTTGTGGGATGGCCACCAATTCGATCCTTCAGGAAGAACACCATGACCTCTGCCAATTTGACAAAGAACACTGATGAGGCCGAGGGAAAATCGGGATCTACTGGATGCCTGTATGTAAAAGTTAGTATGGAAGGTGCTCCATATCTAAGGAAGGTTGATCTCAAACTGTATAGAAACTACTCTGAACTATCCTCTGCTCTGGAGAAGATGTTTAGCTGCTTCACTTTTGGTAAATCCCCTCCCTCCCAACAACTATTTGACTTTATGTTCTCAAACACGCTTCATTCACATTAATCTATCAACTTTGATCATCTTTTTAATTGTTTTATAGACGCAACACGATAAATATTTTGATTTCTATGCTTCAGGGAAGTGTAGTACCGAAGGACTTCTAACTGAAGAGCGTCTGAGTGAGAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTTTGTGCTGACATTTGAAGATAAAGATGGAGATTGGATGCTTGTTGGCGATGTCCCTTGGGAGTAAGTTGTTTCATTTAGTTTCTTTTCTTTCTTTTAAGCTCAGAAATAGTCTGTTGCATTTCTACAAAACGAAGAGTCATGTTCGTGTAGATTTGATATGTGAATAACAAGTAGAACAATTAGAGGAGGTTATTTGACTCTTGCCTAGCCGAACATGTGTTGATTTCCATGCTTTAACATGATGTCTAAGTTCGGATGGCGTTGGCATTGTCAATATGTTTGATATAGTCAACTTTAACTTTGTTTCAGATATTTGTTCTGTGTTTTTGCTTGTTCTTAACTGAGAAACATGCATGTTCAAGTCGTGCTTACTTTCTTTCTTATCGTTTCGGGTCGGATTTTGCAGGATGTTCACTGATTCATGTAGAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGGTAAGTTGAGGCTTAATCTGATATCTAGCATACTCATTTTTCACGGTCATCTTTTTTGTTCATCAATGAAGTATTGTAGATATGTGAACATAATCTAAAGAAATGTCTGCTCATTGTGCAGCACCGAGGACCATAGAGAAGTGCACAACCTGAAACTAGTGCGATGAAGTCCCGAGCAAGACTTTGAAGACAACATCACTTGGGATTGCAAAAGTCCTTTTCAAAAGAAATATTATTGTTCATCATGTTACAAACTAATGCTGTATGTTATGTAATGCTAACATTTTCTTGCTTGGTAGATAAGAGAATTTCACTGAAAGACACTGGATGGAGTGTTGTGTGTTAAATGATAATTGTTGTTATTGCCCTCCCGTCTTAAAGCAAGAGTAAATCCTATGAGTATGTTTGCACTTAACAAGATACCATTCAAATCACTATGATCACATCATTACCTTATTATTTCCGTGTCAATGCTAAGCTCGATAACCTGAACACATCATGCCCAAAAGGGGCATTAAGAATGACATTTCCAAACACAAAAACGACTCGAGACATGCTCTATTATCTCGAGAAGGAAGGAAGAGGAGAAGCATATCAGAATTTGCAGGGATAAGAAGAAGCATGTTTTATGGCAGAGGTGTTAGTTGGTGAAGAGGAGCGGCGCCGGTCTGTGGTGGAAGATCGATGCTGAGAGAAGATAGTCTGTGAGATCTTTTGCAGGCAACAAATATTCGGAGACAAACCATGGCAAAGAAAGGGAGGTTTGTTTCTGACGAGGGTCAGTAGTGGCTAAGCTTTTTAAGGTTTGGGTTCTTTAAATGCCCAAACTATGAGCAAC

mRNA sequence

TAAGCGACTGCAGGAATTAGCTGCAGTGACTGGCTGCCATTTTATTTTTCTCGGCAACCCCGTGGGTCAAATTCTGTTCTCTCCTTCTACTTTTTTCGAAAACCCCCAATCACCAAAATCACTCTGAACAAAACCCATTTCTTACCACACAAAAATCACTCCTAATTTTGAAGTAATCACCCCTGTAAGCACACACTTGTTCAAGCAAATCAAGCTTTGTTCAATGGGTTGAAAGCTTCTTTTGCTATCATTTCAGTTTTGTAATTGGGGAAAAGGGAAACTGGCCATTGCTTCAGAAACTTCTTTTCTGCATAAACTCAACCGGAAATTTTGGAACACTCCTCCACACCATTGTCCCTTCTTCTTTCTGCAATTTTGAAGTTCTTGATTCTGTCATTTTTCGATGGAGAGAACCCCAGATAAGATTTCTTCCTGTTCTTCGTCTTCTTCTTCCACGACTAACGTGAGTTTTAAGGACACTGAACTCAGGCTTGGTTTGCCTGGTTCTCAATCGCCTGGAAAGAAATTGGGAACTGGGATTTTTCTGTTTGGCCATGATTTTGAGGATAAGCAGAGTAATGGGTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGTTTTGAAGAATCTTGCTTCTGGGTCTAAGAGGGGTTTTTCTGACGCCATGGATGGGTCGAAATGGGTTTTCTCTGGGAGTAATGGATCAGAGATTAAGGCTTTAGGGGAAGGGGCTGTGTTGTTTTCGCCTAAAAGTGGGAGTAATGTTAATGCGCCACCACTTTGTGGTTCTTTGAAGCCTGTGAAGGAAGTGGTTTCTGTTAATCAATCTTCTATGCCTGTTCAGGACAAGAAGCCTGAAAATGGCGGTGCTTCTTTGGCTAAGGCACAGGTTGTGGGATGGCCACCAATTCGATCCTTCAGGAAGAACACCATGACCTCTGCCAATTTGACAAAGAACACTGATGAGGCCGAGGGAAAATCGGGATCTACTGGATGCCTGTATGTAAAAGTTAGTATGGAAGGTGCTCCATATCTAAGGAAGGTTGATCTCAAACTGTATAGAAACTACTCTGAACTATCCTCTGCTCTGGAGAAGATGTTTAGCTGCTTCACTTTTGGGAAGTGTAGTACCGAAGGACTTCTAACTGAAGAGCGTCTGAGTGAGAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTTTGTGCTGACATTTGAAGATAAAGATGGAGATTGGATGCTTGTTGGCGATGTCCCTTGGGAGATGTTCACTGATTCATGTAGAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGCACCGAGGACCATAGAGAAGTGCACAACCTGAAACTAGTGCGATGAAGTCCCGAGCAAGACTTTGAAGACAACATCACTTGGGATTGCAAAAGTCCTTTTCAAAAGAAATATTATTGTTCATCATGTTACAAACTAATGCTGTATGTTATGTAATGCTAACATTTTCTTGCTTGGTAGATAAGAGAATTTCACTGAAAGACACTGGATGGAGTGTTGTGTGTTAAATGATAATTGTTGTTATTGCCCTCCCGTCTTAAAGCAAGAGTAAATCCTATGAGTATGTTTGCACTTAACAAGATACCATTCAAATCACTATGATCACATCATTACCTTATTATTTCCGTGTCAATGCTAAGCTCGATAACCTGAACACATCATGCCCAAAAGGGGCATTAAGAATGACATTTCCAAACACAAAAACGACTCGAGACATGCTCTATTATCTCGAGAAGGAAGGAAGAGGAGAAGCATATCAGAATTTGCAGGGATAAGAAGAAGCATGTTTTATGGCAGAGGTGTTAGTTGGTGAAGAGGAGCGGCGCCGGTCTGTGGTGGAAGATCGATGCTGAGAGAAGATAGTCTGTGAGATCTTTTGCAGGCAACAAATATTCGGAGACAAACCATGGCAAAGAAAGGGAGGTTTGTTTCTGACGAGGGTCAGTAGTGGCTAAGCTTTTTAAGGTTTGGGTTCTTTAAATGCCCAAACTATGAGCAAC

Coding sequence (CDS)

ATGGAGAGAACCCCAGATAAGATTTCTTCCTGTTCTTCGTCTTCTTCTTCCACGACTAACGTGAGTTTTAAGGACACTGAACTCAGGCTTGGTTTGCCTGGTTCTCAATCGCCTGGAAAGAAATTGGGAACTGGGATTTTTCTGTTTGGCCATGATTTTGAGGATAAGCAGAGTAATGGGTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGTTTTGAAGAATCTTGCTTCTGGGTCTAAGAGGGGTTTTTCTGACGCCATGGATGGGTCGAAATGGGTTTTCTCTGGGAGTAATGGATCAGAGATTAAGGCTTTAGGGGAAGGGGCTGTGTTGTTTTCGCCTAAAAGTGGGAGTAATGTTAATGCGCCACCACTTTGTGGTTCTTTGAAGCCTGTGAAGGAAGTGGTTTCTGTTAATCAATCTTCTATGCCTGTTCAGGACAAGAAGCCTGAAAATGGCGGTGCTTCTTTGGCTAAGGCACAGGTTGTGGGATGGCCACCAATTCGATCCTTCAGGAAGAACACCATGACCTCTGCCAATTTGACAAAGAACACTGATGAGGCCGAGGGAAAATCGGGATCTACTGGATGCCTGTATGTAAAAGTTAGTATGGAAGGTGCTCCATATCTAAGGAAGGTTGATCTCAAACTGTATAGAAACTACTCTGAACTATCCTCTGCTCTGGAGAAGATGTTTAGCTGCTTCACTTTTGGGAAGTGTAGTACCGAAGGACTTCTAACTGAAGAGCGTCTGAGTGAGAGTAATTTGAAGGATTTCCTCCATGGATCTGAGTTTGTGCTGACATTTGAAGATAAAGATGGAGATTGGATGCTTGTTGGCGATGTCCCTTGGGAGATGTTCACTGATTCATGTAGAAGACTCCGAATCATGAAAGGTTCTGAAGCAATTGGGCTAGCACCGAGGACCATAGAGAAGTGCACAACCTGA

Protein sequence

MERTPDKISSCSSSSSSTTNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLFSPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKCTT

Homology

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BLAST of Sed0026478.1 vs. NCBI nr
Match: XP_038899516.1 (auxin-responsive protein IAA21-like [Benincasa hispida])

HSP 1 Score: 465.3 bits (1196), Expect = 4.2e-127
Identity = 256/334 (76.65%), Postives = 274/334 (82.04%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSSTTN-------VSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           E+ P   SS SSSSS  TN       VSFKDTELRLGLPGSQSP +KLG+GI LFG+D E
Sbjct: 23  EKNPSSSSSASSSSSLVTNEDKKCVTVSFKDTELRLGLPGSQSPERKLGSGISLFGNDSE 82

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIKALGEGAV 121
           D+QSNGFSS+   +     LKNL SGSKRGFSDA+DGS  KWVFSG+N SE+K L EGAV
Sbjct: 83  DEQSNGFSSACPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGNNRSEVK-LSEGAV 142

Query: 122 LFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---ENGGASLAK 181
           LFSPKS        GSNVNAP  C +LK VKEV+ V QSS PVQ+KKP   ENGGA LAK
Sbjct: 143 LFSPKSGKPAIGGLGSNVNAPQSCVTLKAVKEVLPVPQSSNPVQEKKPQVSENGGAPLAK 202

Query: 182 AQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYR 241
           AQVVGWPPIRSFRKNTMTS N TKNTDE EGKSGS+GCLYVKVSMEGAPYLRKVDLKLY 
Sbjct: 203 AQVVGWPPIRSFRKNTMTSTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRKVDLKLYS 262

Query: 242 NYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLV 301
           NYSELS ALEKMFSCFT G+C TEGL T+ERLSESNLKDFLHGSE+VLT EDKDGDWMLV
Sbjct: 263 NYSELSLALEKMFSCFTIGQCGTEGLPTKERLSESNLKDFLHGSEYVLTCEDKDGDWMLV 322

Query: 302 GDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           GDVPWEMFTDSCRRLRIMKGSEAIGLAPR +EKC
Sbjct: 323 GDVPWEMFTDSCRRLRIMKGSEAIGLAPRALEKC 350

[Close]

BLAST of Sed0026478.1 vs. NCBI nr
Match: XP_023548069.1 (auxin-responsive protein IAA27-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.8 bits (1179), Expect = 3.9e-125
Identity = 253/335 (75.52%), Postives = 268/335 (80.00%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSSTT------------NVSFKDTELRLGLPGSQSPGKKLGTGIFL 60
           MERTP+K SS SSS+SS++             VSFKDTELRLGLPG QSP +K GTGI L
Sbjct: 18  MERTPEKNSSSSSSASSSSPPPGTNEEKNCATVSFKDTELRLGLPGFQSPERKSGTGISL 77

Query: 61  FGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIKA 120
           FG+DFEDKQSNGF SS        +LKNL SGSKRGFSDA+DGS  KW FSGSNG     
Sbjct: 78  FGNDFEDKQSNGFCSSR-------ILKNLVSGSKRGFSDAIDGSSVKWGFSGSNG----- 137

Query: 121 LGEGAVLFSPKSG---SNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---ENGGASLA 180
           L EG +LFSPKSG   SNVNAP  CGSLK VKEVV V QSS P Q+KKP   ENGGA LA
Sbjct: 138 LSEGTMLFSPKSGMPPSNVNAPQACGSLKAVKEVVPVKQSSKPAQEKKPQVSENGGAPLA 197

Query: 181 KAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLY 240
           KAQVVGWPPIRSFRK+TMTS N TK  DEAEGKS  TGCLYVKVSMEGAPYLRKVDLKL 
Sbjct: 198 KAQVVGWPPIRSFRKSTMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLC 257

Query: 241 RNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWML 300
            NYSELS ALEKMFSCFT G+C TEGL T+ERLSESNL DFLHGSE+VLT+EDKDGDWML
Sbjct: 258 SNYSELSLALEKMFSCFTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWML 317

Query: 301 VGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           VGDVPWEMFTDSCRRLRIMKGSEAIGLAPR IEKC
Sbjct: 318 VGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAIEKC 340

[Close]

BLAST of Sed0026478.1 vs. NCBI nr
Match: XP_022151565.1 (auxin-responsive protein IAA27-like [Momordica charantia])

HSP 1 Score: 458.0 bits (1177), Expect = 6.7e-125
Identity = 257/340 (75.59%), Postives = 272/340 (80.00%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSS-----TTN-------VSFKDTELRLGLPGSQSPGKKLGTGIFL 60
           MER+P+KISS SSSSSS      TN       VSFKDTELRLGLPGSQSP +K GTGI L
Sbjct: 18  MERSPEKISSSSSSSSSPPSSNVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGTGISL 77

Query: 61  FGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIKA 120
           FG DFEDKQSNG+       SSSC LKNL SGSKRGFSDA+DGS  KWVFSG NGSE+K 
Sbjct: 78  FGKDFEDKQSNGY-------SSSCPLKNLVSGSKRGFSDAIDGSSAKWVFSGGNGSEVK- 137

Query: 121 LGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---ENG 180
           LGEGAVLFSPKS        GSNVNA       +P KEV  V QSS P Q+KKP   EN 
Sbjct: 138 LGEGAVLFSPKSGKPPIGGLGSNVNAS------QPQKEVHPVPQSSKPAQEKKPQVSENA 197

Query: 181 GASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKV 240
           GA LAKAQVVGWPPIRSFRKNTMTS+N TKN DEAE KSGS+ CLYVKVSMEGAPYLRKV
Sbjct: 198 GAPLAKAQVVGWPPIRSFRKNTMTSSNSTKNADEAEEKSGSSSCLYVKVSMEGAPYLRKV 257

Query: 241 DLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKD 300
           DLKLY NYSELS ALEKMFSCFT G+C TEGL T+E LSESNLKDFLHGSE+VLT+EDKD
Sbjct: 258 DLKLYSNYSELSLALEKMFSCFTIGQCGTEGLPTKEGLSESNLKDFLHGSEYVLTYEDKD 317

Query: 301 GDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           GDWMLVGDVPWEMFTD+CRRLRIMKGSEAIGLAPR IEKC
Sbjct: 318 GDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAIEKC 343

[Close]

BLAST of Sed0026478.1 vs. NCBI nr
Match: XP_004141756.1 (auxin-responsive protein IAA21 [Cucumis sativus] >KGN45391.1 hypothetical protein Csa_016029 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.9e-124
Identity = 253/341 (74.19%), Postives = 271/341 (79.47%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSST-------------TNVSFKDTELRLGLPGSQSPGKKLGTGIF 60
           MER+P+K  S SSSS S+               VSFKDTELRLGLPGSQSP +K G+ I 
Sbjct: 18  MERSPEKNPSSSSSSDSSDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEIS 77

Query: 61  LFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIK 120
            FG+DFEDKQSNGFSS    +     LKNL SGSKRGFSDA+DGS  KWVFSGSNGSE+K
Sbjct: 78  FFGNDFEDKQSNGFSSPCPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVK 137

Query: 121 ALGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---EN 180
            LGEGAVLFSPKS        GSNVN P  C +LK VKEV+ V QSS  VQ+KKP   EN
Sbjct: 138 -LGEGAVLFSPKSGKPTIGGLGSNVNTPQSCVTLKAVKEVLPVPQSSNSVQEKKPQVSEN 197

Query: 181 GGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRK 240
           GGA LAKAQVVGWPPIRSFRKNTMT+ N TKNTDE EGKSGS+GCLYVKVSMEGAPYLRK
Sbjct: 198 GGAPLAKAQVVGWPPIRSFRKNTMTTTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRK 257

Query: 241 VDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDK 300
           VDLKLY NYSELS ALEKMFSCFT G+C TEGL T+ERLSESN KDFLHGSE+VLT EDK
Sbjct: 258 VDLKLYSNYSELSLALEKMFSCFTIGQCGTEGLPTKERLSESNSKDFLHGSEYVLTCEDK 317

Query: 301 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           DGDWMLVGDVPWEMFT+SCRRLRIMKGSEAIGLAPR  EKC
Sbjct: 318 DGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRATEKC 352

[Close]

BLAST of Sed0026478.1 vs. NCBI nr
Match: XP_008462174.1 (PREDICTED: auxin-responsive protein IAA27-like [Cucumis melo] >TYK04012.1 auxin-responsive protein IAA27-like [Cucumis melo var. makuwa])

HSP 1 Score: 455.3 bits (1170), Expect = 4.3e-124
Identity = 253/341 (74.19%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSST-------------TNVSFKDTELRLGLPGSQSPGKKLGTGIF 60
           MER+P+K  S SSSS ST               VSFKDTELRLGLPGSQSP +K G+ I 
Sbjct: 18  MERSPEKNPSSSSSSDSTDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEIS 77

Query: 61  LFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIK 120
            FG+DFEDKQSNGFSSS   +     LKNL SGSKRGFSDA+DGS  KWVFSGSNGSE+K
Sbjct: 78  FFGNDFEDKQSNGFSSSCPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVK 137

Query: 121 ALGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---EN 180
            LGEGAVLFSPKS        GSNVN P  C +LK VKEV+ V QSS  VQ+KKP   EN
Sbjct: 138 -LGEGAVLFSPKSGKPTIGGLGSNVNTPQSCVTLKAVKEVLPVPQSSNSVQEKKPQVSEN 197

Query: 181 GGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRK 240
           GGA LAKAQVVGWPPIRSFRKNTMT+ N TKNTDE EGKSG +GCLYVKVSMEGAPYLRK
Sbjct: 198 GGAPLAKAQVVGWPPIRSFRKNTMTTTNSTKNTDEGEGKSGPSGCLYVKVSMEGAPYLRK 257

Query: 241 VDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDK 300
           VDLKLY NYSELS ALEKMFSCFT G+C TEG  T+ERLSESN KDFLHGSE+VLT EDK
Sbjct: 258 VDLKLYSNYSELSLALEKMFSCFTIGQCGTEGHPTKERLSESNSKDFLHGSEYVLTCEDK 317

Query: 301 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           DGDWMLVGDVPWEMFT+SCRRLRIMKGSEAIGLAPR  EKC
Sbjct: 318 DGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRATEKC 352

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BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-70
Identity = 165/324 (50.93%), Postives = 210/324 (64.81%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSST-------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           ER    +S CSS  SST       +N++FK TELRLGLP SQSP ++   G+ L     +
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGL-LSPRTPD 80

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLF 121
           +K       S  + S++   KN+ SG+KRGF+D  D     FSG  GS ++  G   ++ 
Sbjct: 81  EKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD----EFSGVKGS-VRPGGGINMML 140

Query: 122 SPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGG----ASLAKAQVVGWPPI 181
           SPK                VK+V      S  +Q+++    G    A  AKAQVVGWPPI
Sbjct: 141 SPK----------------VKDV------SKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 200

Query: 182 RSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSAL 241
           RS+RKNTM S+  +KNTDE +GK G  G L+VKVSM+GAPYLRKVDL+ Y +Y +LSSAL
Sbjct: 201 RSYRKNTMASST-SKNTDEVDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSAL 260

Query: 242 EKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFT 301
           EKMFSCFT G+C   G    ER+SE  LKD LHGSEFVLT+EDKDGDWMLVGDVPWE+FT
Sbjct: 261 EKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFT 314

Query: 302 DSCRRLRIMKGSEAIGLAPRTIEK 315
           ++C++L+IMKGS++IGLAP  +EK
Sbjct: 321 ETCQKLKIMKGSDSIGLAPGAVEK 314

[Close]

BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.8e-64
Identity = 152/315 (48.25%), Postives = 196/315 (62.22%), Query Frame = 0


Query: 8   ISSCSSSSSSTTNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFEDKQSNGFSSSSSS 67
           +S  + +  +   ++FK TELRLGLPGS+SP                ++  + F + + S
Sbjct: 25  MSDKTKTRDNNNGLNFKATELRLGLPGSESP----------------ERVDSRFLALNKS 84

Query: 68  SSSSCVLKNLASGSKRGFSDAM-DGSKWVFSGSNGSEIKALGEGAVLFSPKSGSNVNAPP 127
           S          SG+KR FSDA+ D +KWVFS  + +    +G G             + P
Sbjct: 85  SCP-------VSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSG-------------SGP 144

Query: 128 LCGSLKPVKEVVSVNQSSMPVQDKKPENGGASLAKAQVVGWPPIRSFRKNTMTSANLTK- 187
               +K  K   +  + ++PV++KK  +  A  +KAQVVGWPPIRSFRKN+M S+   K 
Sbjct: 145 RTSVVKDGKS-TTFTKPAVPVKEKK-SSATAPASKAQVVGWPPIRSFRKNSMASSQSQKP 204

Query: 188 ----NTDEAEGKSG-STGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSALEKMFSCFTFG 247
                T+EAE KSG    CLYVKVSMEGAPYLRK+DLK Y++Y ELSSALEKMFSCFT G
Sbjct: 205 GNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIG 264

Query: 248 KCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRIMK 307
           +  + G    + L+ES L D L GSE+V+T+EDKD DWMLVGDVPWEMF  SC++LRIMK
Sbjct: 265 QFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMK 301

Query: 308 GSEAIGLAPRTIEKC 316
            SEAIGLAPR +EKC
Sbjct: 325 SSEAIGLAPRVMEKC 301

[Close]

BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.2e-61
Identity = 153/318 (48.11%), Postives = 195/318 (61.32%), Query Frame = 0


Query: 8   ISSCSSSSSST---------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFEDKQS 67
           +S CSS  SST           +S K TEL LGLPGSQSP +   T + L      D++ 
Sbjct: 39  LSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPAR--DTELNLLSPAKLDEKP 98

Query: 68  NGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLFSPKS 127
                 S     S   KN ASG+KRGFSD MD     F+ +  S      E   +F P++
Sbjct: 99  FFPLLPSKDEICSSSQKNNASGNKRGFSDTMD----QFAEAKSS---VYTEKNWMF-PEA 158

Query: 128 GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGGASLAKAQVVGWPPIRSFRKNTM 187
            +  +      + K V + +   QSS       P       AKAQ+VGWPP+RS+RKNT+
Sbjct: 159 AATQSV-----TKKDVPQNIPKGQSSTTNNSSSP-----PAAKAQIVGWPPVRSYRKNTL 218

Query: 188 TSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSALEKMFSCFT 247
             A   KN+DE +G+ GS G L+VKVSM+GAPYLRKVDL+ Y NY ELSSALEKMF+ FT
Sbjct: 219 --ATTCKNSDEVDGRPGS-GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFT 278

Query: 248 FGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRI 307
            G+C + G   ++ LSE+ LKD L+G ++VLT+EDKDGDWMLVGDVPWEMF D C++L+I
Sbjct: 279 LGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKI 333

Query: 308 MKGSEAIGL--APRTIEK 315
           MKG +AIGL  APR +EK
Sbjct: 339 MKGCDAIGLAAAPRAMEK 333

[Close]

BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot
Match: Q5Z749 (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-55
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 26  TELRLGLPGSQSPGKKLGTGIFLFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGF 85
           TELRLGLPG+                  E+ +S G     + ++   +      G+KRGF
Sbjct: 22  TELRLGLPGTA-----------------EEAESEGGGGGGTDAAPLTLELLPKGGAKRGF 81

Query: 86  SDAMDGSKWVFSGSNGSEIKALGEGAVLFSPKSGSNVNAPPLCGSLKPVKEVVSVNQSSM 145
           +DA+ G      G  G   +A G  A   + ++                           
Sbjct: 82  ADAIVG------GPAGQRREAAGGKAAAAAAEA--------------------------- 141

Query: 146 PVQDKKPENGGASLAKAQVVGWPPIRSFRKNTMT-SANLTKNTDEAEGKSG-STGCLYVK 205
             ++++ +   A  AKAQVVGWPPIRS+RKNTM  S    K  D+ E K   ++GCLYVK
Sbjct: 142 -EEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVK 201

Query: 206 VSMEGAPYLRKVDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLH 265
           VSM+GAPYLRKVDLK+Y+NY ELS ALEKMFSCFT G   + G    + LS+  L D  +
Sbjct: 202 VSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKN 261

Query: 266 GSEFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEK 315
           G+E VLT+EDKD DWMLVGDVPW MFTDSCRRLRIMKGS+A+GLAPR  +K
Sbjct: 262 GTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDK 261

[Close]

BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 9.3e-53
Identity = 116/230 (50.43%), Postives = 148/230 (64.35%), Query Frame = 0


Query: 98  GSNGSEIKALGEGAVLFSPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGGA 157
           G++G E+     G   FS      +N      S   +  V  V+  +M  +  KP     
Sbjct: 16  GNHGGEMAGKNNGKRGFSETVDLKLNL-----SSTAMDSVSKVDLENMKEKVVKPP---- 75

Query: 158 SLAKAQVVGWPPIRSFRKNTM-----TSANLTKNTDEAEGKSGSTG-------CLYVKVS 217
             AKAQVVGWPP+RSFRKN M     T+ + T+  D+  G SG+T          YVKVS
Sbjct: 76  --AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVS 135

Query: 218 MEGAPYLRKVDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGS 277
           M+GAPYLRK+DLKLY+ Y +LS+AL KMFS FT G    +G+  ++ ++ES L D L+GS
Sbjct: 136 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGS 195

Query: 278 EFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           ++V T+EDKDGDWMLVGDVPWEMF DSC+R+RIMKGSEAIGLAPR +EKC
Sbjct: 196 DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKC 232

[Close]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL
Match: A0A6J1DBJ4 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111019475 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.2e-125
Identity = 257/340 (75.59%), Postives = 272/340 (80.00%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSS-----TTN-------VSFKDTELRLGLPGSQSPGKKLGTGIFL 60
           MER+P+KISS SSSSSS      TN       VSFKDTELRLGLPGSQSP +K GTGI L
Sbjct: 18  MERSPEKISSSSSSSSSPPSSNVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGTGISL 77

Query: 61  FGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIKA 120
           FG DFEDKQSNG+       SSSC LKNL SGSKRGFSDA+DGS  KWVFSG NGSE+K 
Sbjct: 78  FGKDFEDKQSNGY-------SSSCPLKNLVSGSKRGFSDAIDGSSAKWVFSGGNGSEVK- 137

Query: 121 LGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---ENG 180
           LGEGAVLFSPKS        GSNVNA       +P KEV  V QSS P Q+KKP   EN 
Sbjct: 138 LGEGAVLFSPKSGKPPIGGLGSNVNAS------QPQKEVHPVPQSSKPAQEKKPQVSENA 197

Query: 181 GASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKV 240
           GA LAKAQVVGWPPIRSFRKNTMTS+N TKN DEAE KSGS+ CLYVKVSMEGAPYLRKV
Sbjct: 198 GAPLAKAQVVGWPPIRSFRKNTMTSSNSTKNADEAEEKSGSSSCLYVKVSMEGAPYLRKV 257

Query: 241 DLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKD 300
           DLKLY NYSELS ALEKMFSCFT G+C TEGL T+E LSESNLKDFLHGSE+VLT+EDKD
Sbjct: 258 DLKLYSNYSELSLALEKMFSCFTIGQCGTEGLPTKEGLSESNLKDFLHGSEYVLTYEDKD 317

Query: 301 GDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           GDWMLVGDVPWEMFTD+CRRLRIMKGSEAIGLAPR IEKC
Sbjct: 318 GDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAIEKC 343

[Close]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL
Match: A0A0A0KC72 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G447060 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 9.4e-125
Identity = 253/341 (74.19%), Postives = 271/341 (79.47%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSST-------------TNVSFKDTELRLGLPGSQSPGKKLGTGIF 60
           MER+P+K  S SSSS S+               VSFKDTELRLGLPGSQSP +K G+ I 
Sbjct: 18  MERSPEKNPSSSSSSDSSDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEIS 77

Query: 61  LFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIK 120
            FG+DFEDKQSNGFSS    +     LKNL SGSKRGFSDA+DGS  KWVFSGSNGSE+K
Sbjct: 78  FFGNDFEDKQSNGFSSPCPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVK 137

Query: 121 ALGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---EN 180
            LGEGAVLFSPKS        GSNVN P  C +LK VKEV+ V QSS  VQ+KKP   EN
Sbjct: 138 -LGEGAVLFSPKSGKPTIGGLGSNVNTPQSCVTLKAVKEVLPVPQSSNSVQEKKPQVSEN 197

Query: 181 GGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRK 240
           GGA LAKAQVVGWPPIRSFRKNTMT+ N TKNTDE EGKSGS+GCLYVKVSMEGAPYLRK
Sbjct: 198 GGAPLAKAQVVGWPPIRSFRKNTMTTTNSTKNTDEGEGKSGSSGCLYVKVSMEGAPYLRK 257

Query: 241 VDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDK 300
           VDLKLY NYSELS ALEKMFSCFT G+C TEGL T+ERLSESN KDFLHGSE+VLT EDK
Sbjct: 258 VDLKLYSNYSELSLALEKMFSCFTIGQCGTEGLPTKERLSESNSKDFLHGSEYVLTCEDK 317

Query: 301 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           DGDWMLVGDVPWEMFT+SCRRLRIMKGSEAIGLAPR  EKC
Sbjct: 318 DGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRATEKC 352

[Close]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL
Match: A0A5D3BYR1 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002100 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 253/341 (74.19%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSST-------------TNVSFKDTELRLGLPGSQSPGKKLGTGIF 60
           MER+P+K  S SSSS ST               VSFKDTELRLGLPGSQSP +K G+ I 
Sbjct: 18  MERSPEKNPSSSSSSDSTDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEIS 77

Query: 61  LFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIK 120
            FG+DFEDKQSNGFSSS   +     LKNL SGSKRGFSDA+DGS  KWVFSGSNGSE+K
Sbjct: 78  FFGNDFEDKQSNGFSSSCPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVK 137

Query: 121 ALGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---EN 180
            LGEGAVLFSPKS        GSNVN P  C +LK VKEV+ V QSS  VQ+KKP   EN
Sbjct: 138 -LGEGAVLFSPKSGKPTIGGLGSNVNTPQSCVTLKAVKEVLPVPQSSNSVQEKKPQVSEN 197

Query: 181 GGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRK 240
           GGA LAKAQVVGWPPIRSFRKNTMT+ N TKNTDE EGKSG +GCLYVKVSMEGAPYLRK
Sbjct: 198 GGAPLAKAQVVGWPPIRSFRKNTMTTTNSTKNTDEGEGKSGPSGCLYVKVSMEGAPYLRK 257

Query: 241 VDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDK 300
           VDLKLY NYSELS ALEKMFSCFT G+C TEG  T+ERLSESN KDFLHGSE+VLT EDK
Sbjct: 258 VDLKLYSNYSELSLALEKMFSCFTIGQCGTEGHPTKERLSESNSKDFLHGSEYVLTCEDK 317

Query: 301 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           DGDWMLVGDVPWEMFT+SCRRLRIMKGSEAIGLAPR  EKC
Sbjct: 318 DGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRATEKC 352

[Close]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL
Match: A0A1S3CGV5 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103500598 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 253/341 (74.19%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSST-------------TNVSFKDTELRLGLPGSQSPGKKLGTGIF 60
           MER+P+K  S SSSS ST               VSFKDTELRLGLPGSQSP +K G+ I 
Sbjct: 18  MERSPEKNPSSSSSSDSTDSCSHVTNEEKKCATVSFKDTELRLGLPGSQSPERKSGSEIS 77

Query: 61  LFGHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIK 120
            FG+DFEDKQSNGFSSS   +     LKNL SGSKRGFSDA+DGS  KWVFSGSNGSE+K
Sbjct: 78  FFGNDFEDKQSNGFSSSCPLN-----LKNLVSGSKRGFSDAIDGSSAKWVFSGSNGSEVK 137

Query: 121 ALGEGAVLFSPKS--------GSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---EN 180
            LGEGAVLFSPKS        GSNVN P  C +LK VKEV+ V QSS  VQ+KKP   EN
Sbjct: 138 -LGEGAVLFSPKSGKPTIGGLGSNVNTPQSCVTLKAVKEVLPVPQSSNSVQEKKPQVSEN 197

Query: 181 GGASLAKAQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRK 240
           GGA LAKAQVVGWPPIRSFRKNTMT+ N TKNTDE EGKSG +GCLYVKVSMEGAPYLRK
Sbjct: 198 GGAPLAKAQVVGWPPIRSFRKNTMTTTNSTKNTDEGEGKSGPSGCLYVKVSMEGAPYLRK 257

Query: 241 VDLKLYRNYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDK 300
           VDLKLY NYSELS ALEKMFSCFT G+C TEG  T+ERLSESN KDFLHGSE+VLT EDK
Sbjct: 258 VDLKLYSNYSELSLALEKMFSCFTIGQCGTEGHPTKERLSESNSKDFLHGSEYVLTCEDK 317

Query: 301 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           DGDWMLVGDVPWEMFT+SCRRLRIMKGSEAIGLAPR  EKC
Sbjct: 318 DGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRATEKC 352

[Close]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL
Match: A0A6J1JVE5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488670 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.8e-123
Identity = 250/334 (74.85%), Postives = 266/334 (79.64%), Query Frame = 0


Query: 1   MERTPDKISSCSSSSSSTT-----------NVSFKDTELRLGLPGSQSPGKKLGTGIFLF 60
           MERTP+K SS SSS+SS++            VSFKDTELRLGLPG QS  +K GTGI LF
Sbjct: 18  MERTPEKNSSSSSSASSSSPPGTNEEKNCATVSFKDTELRLGLPGFQSSERKSGTGISLF 77

Query: 61  GHDFEDKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGS--KWVFSGSNGSEIKAL 120
            +DFEDKQSNGF SS        +LKNL SGSKRGFSDA+DGS  KW FSGSNG     L
Sbjct: 78  SNDFEDKQSNGFCSSR-------ILKNLVSGSKRGFSDAIDGSSVKWGFSGSNG-----L 137

Query: 121 GEGAVLFSPKSG---SNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKP---ENGGASLAK 180
            EG +LFSPKSG   S VNAP  CGSLK VKEVV VNQSS P Q++KP   ENGGA LAK
Sbjct: 138 SEGTMLFSPKSGMPPSTVNAPQACGSLKAVKEVVPVNQSSKPAQEEKPQVSENGGAPLAK 197

Query: 181 AQVVGWPPIRSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYR 240
           AQVVGWPPIRSFRK+TMTS N TK  DEAEGKS  TGCLYVKVSMEGAPYLRKVDLKL  
Sbjct: 198 AQVVGWPPIRSFRKSTMTSTNSTKKADEAEGKSELTGCLYVKVSMEGAPYLRKVDLKLCS 257

Query: 241 NYSELSSALEKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLV 300
           NYSELS ALEKMFSCFT G+C TEGL T+ERLSESNL DFLHGSE+VLT+EDKDGDWMLV
Sbjct: 258 NYSELSLALEKMFSCFTIGQCGTEGLPTKERLSESNLTDFLHGSEYVLTYEDKDGDWMLV 317

Query: 301 GDVPWEMFTDSCRRLRIMKGSEAIGLAPRTIEKC 316
           GDVPWEMFTDSCRRLRIMKGSEAIGLAPR IEKC
Sbjct: 318 GDVPWEMFTDSCRRLRIMKGSEAIGLAPRAIEKC 339

[Close]

BLAST of Sed0026478.1 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-71
Identity = 165/324 (50.93%), Postives = 210/324 (64.81%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSST-------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           ER    +S CSS  SST       +N++FK TELRLGLP SQSP ++   G+ L     +
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGL-LSPRTPD 80

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLF 121
           +K       S  + S++   KN+ SG+KRGF+D  D     FSG  GS ++  G   ++ 
Sbjct: 81  EKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD----EFSGVKGS-VRPGGGINMML 140

Query: 122 SPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGG----ASLAKAQVVGWPPI 181
           SPK                VK+V      S  +Q+++    G    A  AKAQVVGWPPI
Sbjct: 141 SPK----------------VKDV------SKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 200

Query: 182 RSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSAL 241
           RS+RKNTM S+  +KNTDE +GK G  G L+VKVSM+GAPYLRKVDL+ Y +Y +LSSAL
Sbjct: 201 RSYRKNTMASST-SKNTDEVDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSAL 260

Query: 242 EKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFT 301
           EKMFSCFT G+C   G    ER+SE  LKD LHGSEFVLT+EDKDGDWMLVGDVPWE+FT
Sbjct: 261 EKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFT 314

Query: 302 DSCRRLRIMKGSEAIGLAPRTIEK 315
           ++C++L+IMKGS++IGLAP  +EK
Sbjct: 321 ETCQKLKIMKGSDSIGLAPGAVEK 314

[Close]

BLAST of Sed0026478.1 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-71
Identity = 165/324 (50.93%), Postives = 210/324 (64.81%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSST-------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           ER    +S CSS  SST       +N++FK TELRLGLP SQSP ++   G+ L     +
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGL-LSPRTPD 80

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLF 121
           +K       S  + S++   KN+ SG+KRGF+D  D     FSG  GS ++  G   ++ 
Sbjct: 81  EKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD----EFSGVKGS-VRPGGGINMML 140

Query: 122 SPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGG----ASLAKAQVVGWPPI 181
           SPK                VK+V      S  +Q+++    G    A  AKAQVVGWPPI
Sbjct: 141 SPK----------------VKDV------SKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 200

Query: 182 RSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSAL 241
           RS+RKNTM S+  +KNTDE +GK G  G L+VKVSM+GAPYLRKVDL+ Y +Y +LSSAL
Sbjct: 201 RSYRKNTMASST-SKNTDEVDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSAL 260

Query: 242 EKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFT 301
           EKMFSCFT G+C   G    ER+SE  LKD LHGSEFVLT+EDKDGDWMLVGDVPWE+FT
Sbjct: 261 EKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFT 314

Query: 302 DSCRRLRIMKGSEAIGLAPRTIEK 315
           ++C++L+IMKGS++IGLAP  +EK
Sbjct: 321 ETCQKLKIMKGSDSIGLAPGAVEK 314

[Close]

BLAST of Sed0026478.1 vs. TAIR 10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-71
Identity = 165/324 (50.93%), Postives = 210/324 (64.81%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSST-------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           ER    +S CSS  SST       +N++FK TELRLGLP SQSP ++   G+ L     +
Sbjct: 38  ERNYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGL-LSPRTPD 97

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLF 121
           +K       S  + S++   KN+ SG+KRGF+D  D     FSG  GS ++  G   ++ 
Sbjct: 98  EKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD----EFSGVKGS-VRPGGGINMML 157

Query: 122 SPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGG----ASLAKAQVVGWPPI 181
           SPK                VK+V      S  +Q+++    G    A  AKAQVVGWPPI
Sbjct: 158 SPK----------------VKDV------SKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 217

Query: 182 RSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSAL 241
           RS+RKNTM S+  +KNTDE +GK G  G L+VKVSM+GAPYLRKVDL+ Y +Y +LSSAL
Sbjct: 218 RSYRKNTMASST-SKNTDEVDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSAL 277

Query: 242 EKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFT 301
           EKMFSCFT G+C   G    ER+SE  LKD LHGSEFVLT+EDKDGDWMLVGDVPWE+FT
Sbjct: 278 EKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFT 331

Query: 302 DSCRRLRIMKGSEAIGLAPRTIEK 315
           ++C++L+IMKGS++IGLAP  +EK
Sbjct: 338 ETCQKLKIMKGSDSIGLAPGAVEK 331

[Close]

BLAST of Sed0026478.1 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 258.5 bits (659), Expect = 7.2e-69
Identity = 161/317 (50.79%), Postives = 205/317 (64.67%), Query Frame = 0


Query: 2   ERTPDKISSCSSSSSST-------TNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFE 61
           ER    +S CSS  SST       +N++FK TELRLGLP SQSP ++   G+ L     +
Sbjct: 21  ERNYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGL-LSPRTPD 80

Query: 62  DKQSNGFSSSSSSSSSSCVLKNLASGSKRGFSDAMDGSKWVFSGSNGSEIKALGEGAVLF 121
           +K       S  + S++   KN+ SG+KRGF+D  D     FSG  GS ++  G   ++ 
Sbjct: 81  EKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWD----EFSGVKGS-VRPGGGINMML 140

Query: 122 SPKSGSNVNAPPLCGSLKPVKEVVSVNQSSMPVQDKKPENGG----ASLAKAQVVGWPPI 181
           SPK                VK+V      S  +Q+++    G    A  AKAQVVGWPPI
Sbjct: 141 SPK----------------VKDV------SKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 200

Query: 182 RSFRKNTMTSANLTKNTDEAEGKSGSTGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSAL 241
           RS+RKNTM S+  +KNTDE +GK G  G L+VKVSM+GAPYLRKVDL+ Y +Y +LSSAL
Sbjct: 201 RSYRKNTMASST-SKNTDEVDGKPG-LGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSAL 260

Query: 242 EKMFSCFTFGKCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFT 301
           EKMFSCFT G+C   G    ER+SE  LKD LHGSEFVLT+EDKDGDWMLVGDVPWE+FT
Sbjct: 261 EKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFT 307

Query: 302 DSCRRLRIMKGSEAIGL 308
           ++C++L+IMKGS++IGL
Sbjct: 321 ETCQKLKIMKGSDSIGL 307

[Close]

BLAST of Sed0026478.1 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 245.7 bits (626), Expect = 4.9e-65
Identity = 152/315 (48.25%), Postives = 196/315 (62.22%), Query Frame = 0


Query: 8   ISSCSSSSSSTTNVSFKDTELRLGLPGSQSPGKKLGTGIFLFGHDFEDKQSNGFSSSSSS 67
           +S  + +  +   ++FK TELRLGLPGS+SP                ++  + F + + S
Sbjct: 25  MSDKTKTRDNNNGLNFKATELRLGLPGSESP----------------ERVDSRFLALNKS 84

Query: 68  SSSSCVLKNLASGSKRGFSDAM-DGSKWVFSGSNGSEIKALGEGAVLFSPKSGSNVNAPP 127
           S          SG+KR FSDA+ D +KWVFS  + +    +G G             + P
Sbjct: 85  SCP-------VSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSG-------------SGP 144

Query: 128 LCGSLKPVKEVVSVNQSSMPVQDKKPENGGASLAKAQVVGWPPIRSFRKNTMTSANLTK- 187
               +K  K   +  + ++PV++KK  +  A  +KAQVVGWPPIRSFRKN+M S+   K 
Sbjct: 145 RTSVVKDGKS-TTFTKPAVPVKEKK-SSATAPASKAQVVGWPPIRSFRKNSMASSQSQKP 204

Query: 188 ----NTDEAEGKSG-STGCLYVKVSMEGAPYLRKVDLKLYRNYSELSSALEKMFSCFTFG 247
                T+EAE KSG    CLYVKVSMEGAPYLRK+DLK Y++Y ELSSALEKMFSCFT G
Sbjct: 205 GNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIG 264

Query: 248 KCSTEGLLTEERLSESNLKDFLHGSEFVLTFEDKDGDWMLVGDVPWEMFTDSCRRLRIMK 307
           +  + G    + L+ES L D L GSE+V+T+EDKD DWMLVGDVPWEMF  SC++LRIMK
Sbjct: 265 QFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMK 301

Query: 308 GSEAIGLAPRTIEKC 316
            SEAIGLAPR +EKC
Sbjct: 325 SSEAIGLAPRVMEKC 301

The following BLAST results are available for this feature:

BLAST of Sed0026478.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899516.1	4.2e-127	76.65	auxin-responsive protein IAA21-like [Benincasa hispida]	[more]
XP_023548069.1	3.9e-125	75.52	auxin-responsive protein IAA27-like [Cucurbita pepo subsp. pepo]	[more]
XP_022151565.1	6.7e-125	75.59	auxin-responsive protein IAA27-like [Momordica charantia]	[more]
XP_004141756.1	1.9e-124	74.19	auxin-responsive protein IAA21 [Cucumis sativus] >KGN45391.1 hypothetical protei...	[more]
XP_008462174.1	4.3e-124	74.19	PREDICTED: auxin-responsive protein IAA27-like [Cucumis melo] >TYK04012.1 auxin-...	[more]

BLAST of Sed0026478.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38826	2.2e-70	50.93	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
Q9ZSY8	6.8e-64	48.25	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
Q38827	3.2e-61	48.11	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q5Z749	3.4e-55	45.36	Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21...	[more]
O24407	9.3e-53	50.43	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]

BLAST of Sed0026478.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBJ4	3.2e-125	75.59	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111019475 PE=3 SV=...	[more]
A0A0A0KC72	9.4e-125	74.19	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G447060 PE=3 SV=1	[more]
A0A5D3BYR1	2.1e-124	74.19	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CGV5	2.1e-124	74.19	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103500598 PE=3 SV=1	[more]
A0A6J1JVE5	1.8e-123	74.85	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488670 PE=3 SV=1	[more]

BLAST of Sed0026478.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22670.1	1.6e-71	50.93	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	1.6e-71	50.93	indoleacetic acid-induced protein 8	[more]
AT2G22670.4	1.6e-71	50.93	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	7.2e-69	50.79	indoleacetic acid-induced protein 8	[more]
AT4G29080.1	4.9e-65	48.25	phytochrome-associated protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 194..312 e-value: 4.2E-42 score: 144.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR31734:SF157	AUXIN-RESPONSIVE PROTEIN	coord: 9..310
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 195..300
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 26..310 e-value: 6.1E-87 score: 291.5
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 9..310
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 199..301 score: 26.019646

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0026478	Sed0026478	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026478.1-exon	Sed0026478.1-exon-LG07:11140211..11140927	exon
Sed0026478.1-exon	Sed0026478.1-exon-LG07:11141049..11141110	exon
Sed0026478.1-exon	Sed0026478.1-exon-LG07:11141457..11141598	exon
Sed0026478.1-exon	Sed0026478.1-exon-LG07:11141738..11141973	exon
Sed0026478.1-exon	Sed0026478.1-exon-LG07:11142620..11143504	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026478.1-three_prime_utr	Sed0026478.1-three_prime_utr-LG07:11140211..11140895	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026478.1-cds	Sed0026478.1-cds-LG07:11140896..11140927	CDS
Sed0026478.1-cds	Sed0026478.1-cds-LG07:11141049..11141110	CDS
Sed0026478.1-cds	Sed0026478.1-cds-LG07:11141457..11141598	CDS
Sed0026478.1-cds	Sed0026478.1-cds-LG07:11141738..11141973	CDS
Sed0026478.1-cds	Sed0026478.1-cds-LG07:11142620..11143101	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026478.1-five_prime_utr	Sed0026478.1-five_prime_utr-LG07:11143102..11143504	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0026478.1	Sed0026478.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding