Sed0025942.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGGAAATTTGAAGTTGCACGGGGTTGTGGACGGTGATGGTGATGGTGATGGTGATGGGAGGTGGAAGTGCCGCCGCATGAGTTGGTACTGCCATGTTCATATTCGGTGACTCTCTCATTGACAATGGGAATAACAACAATCTTCCCTCTTTTGCGAAGGCCAACTATTACCCTTATGGGATTGATTTCAATGGCGGCCCAACTCGGGCGCTTCTCCAACGGCTACACCATGGTCGATGAAATATCTCGATCTATTTGGGCTCCCACTAGTCCCTTCCTTCTCTGAAGCTTAGGACCTCAAACTCTCCATGGAGTCAACTATGCATCTCACTGCTGCAGGCATTCTTGATGATACGGGAAGGAACTTTGTAAGTCGGATACCTTTCAACCAACAAATCGGGAACTTCGAGGATACGCTCGGCGAGATGAGTAACAATCTAGGTGGGGCGACCAAGGTGGGAGAATCCATCCAAAAGCGCATATTCTTTGTGGGCATGGGGCGAAGAACGACTACCTCAACAATTATCTTATGCCCAATTATGCCACTCGACATCGAGTATAATCCTCAGCAGTATGCGGATTTGTTGGTCAACCGAAGATACGTGAGCGGCTCAAAGTGA ATGGTAGGAAATTTGAAGTTGCACGGGGTTGTGGACGGTGATGGTGATGGTGATGGTGATGGGAGGTGGAAGTGCCGCCGCATGAGTTGGTACTGCCATGACCTCAAACTCTCCATGGAGTCAACTATGCATCTCACTGCTGCAGGCATTCTTGATGATACGGGAAGGAACTTTGTAAGTCGGATACCTTTCAACCAACAAATCGGGAACTTCGAGGATACGCTCGGCGAGATGAGTAACAATCTAGGTGGGGCGACCAAGGTGGGAGAATCCATCCAAAAGCGCATATTCTTTGTGGGCATGGGGCGAAGAACGACTACCTCAACAATTATCTTATGCCCAATTATGCCACTCGACATCGAGTATAATCCTCAGCAGTATGCGGATTTGTTGGTCAACCGAAGATACGTGAGCGGCTCAAAGTGA ATGGTAGGAAATTTGAAGTTGCACGGGGTTGTGGACGGTGATGGTGATGGTGATGGTGATGGGAGGTGGAAGTGCCGCCGCATGAGTTGGTACTGCCATGACCTCAAACTCTCCATGGAGTCAACTATGCATCTCACTGCTGCAGGCATTCTTGATGATACGGGAAGGAACTTTGTAAGTCGGATACCTTTCAACCAACAAATCGGGAACTTCGAGGATACGCTCGGCGAGATGAGTAACAATCTAGGTGGGGCGACCAAGGTGGGAGAATCCATCCAAAAGCGCATATTCTTTGTGGGCATGGGGCGAAGAACGACTACCTCAACAATTATCTTATGCCCAATTATGCCACTCGACATCGAGTATAATCCTCAGCAGTATGCGGATTTGTTGGTCAACCGAAGATACGTGAGCGGCTCAAAGTGA MVGNLKLHGVVDGDGDGDGDGRWKCRRMSWYCHDLKLSMESTMHLTAAGILDDTGRNFVSRIPFNQQIGNFEDTLGEMSNNLGGATKVGESIQKRIFFVGMGRRTTTSTIILCPIMPLDIEYNPQQYADLLVNRRYVSGSK Homology
BLAST of Sed0025942.1 vs. NCBI nr
Match: XP_038884331.1 (GDSL esterase/lipase At1g71691-like [Benincasa hispida]) HSP 1 Score: 102.1 bits (253), Expect = 4.1e-18 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Sed0025942.1 vs. NCBI nr
Match: XP_004138671.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN63057.1 hypothetical protein Csa_022557 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 5.4e-18 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Sed0025942.1 vs. NCBI nr
Match: XP_023527476.1 (GDSL esterase/lipase At1g71691-like [Cucurbita pepo subsp. pepo] >XP_023527485.1 GDSL esterase/lipase At1g71691-like [Cucurbita pepo subsp. pepo] >XP_023527493.1 GDSL esterase/lipase At1g71691-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 100.9 bits (250), Expect = 9.2e-18 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0025942.1 vs. NCBI nr
Match: XP_022990595.1 (GDSL esterase/lipase At1g71691-like [Cucurbita maxima]) HSP 1 Score: 100.9 bits (250), Expect = 9.2e-18 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0025942.1 vs. NCBI nr
Match: KAG7033423.1 (GDSL esterase/lipase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100.9 bits (250), Expect = 9.2e-18 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy Swiss-Prot
Match: Q9SF78 (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana OX=3702 GN=At1g71691 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy Swiss-Prot
Match: Q9C7N4 (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana OX=3702 GN=At1g29670 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07 Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy Swiss-Prot
Match: Q9C7N5 (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana OX=3702 GN=At1g29660 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.5e-07 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy Swiss-Prot
Match: Q9FK75 (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana OX=3702 GN=At5g45670 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.9e-07 Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy Swiss-Prot
Match: Q93YW8 (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana OX=3702 GN=At4g18970 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 27/88 (30.68%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy TrEMBL
Match: A0A0A0LQK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G396190 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.6e-18 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy TrEMBL
Match: A0A6J1JQI6 (GDSL esterase/lipase At1g71691-like OS=Cucurbita maxima OX=3661 GN=LOC111487430 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.5e-18 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy TrEMBL
Match: A0A6J1HJN1 (GDSL esterase/lipase At1g71691-like OS=Cucurbita moschata OX=3662 GN=LOC111463545 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.5e-18 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy TrEMBL
Match: A0A5D3C5G0 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00380 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.8e-18 Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Sed0025942.1 vs. ExPASy TrEMBL
Match: A0A1S3B2S7 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103485377 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.8e-18 Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Sed0025942.1 vs. TAIR 10
Match: AT1G71691.2 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.8e-18 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Sed0025942.1 vs. TAIR 10
Match: AT1G71691.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.8e-18 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Sed0025942.1 vs. TAIR 10
Match: AT1G29670.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08 Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Sed0025942.1 vs. TAIR 10
Match: AT1G29660.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 3.2e-08 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of Sed0025942.1 vs. TAIR 10
Match: AT5G45670.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 7.1e-08 Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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