Sed0025615.3 (mRNA) Chayote v1

Overview


Name	Sed0025615.3
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Auxin response factor
Location	LG09: 36125874 .. 36130583 (-)
Sequence length	2734
RNA-Seq Expression	Sed0025615.3
Synteny	Sed0025615.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATCCTGCTAGCTGAGTGGTCGCTATATATTTCATTGGACCTTACAGACGAATCCTATCCACACATCACCATCGCTCTGCCATCAACTTCTACACCAATCTCAAAATCACAGAGAAACCGAACGAAAATGGAGTCTCTGATCTTGGTTCCAGCCAGTACATGCGTTTCAATCACAAATTCCTCACAATTTTGCTCCGATTTCGCCATTCCATTCGCTTCTAGAATCCGCGCCCTCAACTTCAGAGCTTCTTCGCCGCAGTTTCTCCACTGCAATGGCTTCCGGCAGGGTCGATTAGCTTCAAGGTCTTATGTGCGGTATGGTCCGCCGTACGGTGAGGAAGACGACGACCCTGAAGCGCAGGTTCAAAGCCTTAGGGTTCCTGACGATTGGTCAGTTCCGTCCAAGGCGTTGGAGGTATTGATTTCTGTTCTTTTTTTGGTTTTTTGTTCGATTAAGACTTGTTTTTGAGTTATTGAATGTGATGATTGGTTTTTTTTTTGTTTGTTTGTTCGTGAGTGTTGTGTATTCTCGTATGAACTCTGTGTTTCTAATTGAAGTTTATTGTGACGAGTGTTGTTGTTCTGTAATCTGGTGTGATAGTTTATCCAAGCCAGGGAGTTAGTGTTTTAGTTAAGATCTGGGAGTTGATTAAATAGTAGGAGGTTCGGTTCCATCTCAAAATCGATTAGCTATAAGTAGAGTAGCTCATCTATCTTATTAATGAGAGGAGGTTTTCTCGTCTTTCTATGTGGGATCCTCAACATGCCACTAGAGCGGATACCTCTTTGAGTTCATCAATTTTGGATAGGATCTCAATTTCATTTTTTATTGGACCGAATACACGGTTGCGTTTAATAGGCTCTGATAAGATATTAGATAGACTTTGAGGGGTGGCACGGTGGTCGAAGACTTGGACTTTGAAGGTGTGTTTCTCTCAAGTTCCCAGTTTCGAGACTCACCTGTGAAATTACTTTGTAGATACCTCTCATGTTTTCATTCCTTCGATATCTCCCGGTGCCTGAACGAGAGACGAGCGTGATTATCCTAGGTATAGTGGAGCGAAGCTCCGATTTCTTGGTTTCAAAAAAAATAAAAATAGAAAAACTCTGATAAAATATTAGACAACATGAAGTTTCATCTCAAAATCAATTGACAATGAGTTAAAGTATTCCATCTATCTCATAAATGGGAAGAAGTCTCCTCACCTTCCAAATGTGGGATCAACACCCCGCACAATGTTCTTATCACAAATTTGTTCACTCACTTGAGTATGGTGGTAATGGCTTATGGTGTATTTTTCCATTAAGTCTTGTTTTTTGTTTTTAAAAAAAAGCACATTTTCTCCTTGTTCATAATCTTCTTAATGCTAGAGTTTACTAAAATTTAATCACATTCAAAATTTGGCAGAAAATCTTGTTGGACATCGACTTTATATGTTGCTGCAATATGCATTGATTTTATTTTTTGTTGAGTACGCAATATGCATTGATTTAAGTCCTCTATGAATGAAAGATAGAGAAACAAAATGATAAGGTGCTGCTCTGGAAGTTAAATGGATTTTGATTTGTGAGATGGGAAAGATTTTTGAGTTAATATCAATGATATTAGGCTCCAATGTCACACCTGATAAGGATGCCACTTGAAAATTTTGTTCAACATTGACTATCTGTTGCTGCATAATACATCGACTTTAGTCTTCGATGAACGAGAGATAGAGAAACAAAATGATAATGAAGCTGCTCTGGAAGTCAAATGTATTTTGATTTGTGAGATGGGAAATTTTTTCAAGTTAGTATCAATAATATTAGGCTCCAAAGAAAGGAACAAAAAATAGGCTCCAAAGTCCAGTCAAGAATGCCACTATTTTACATCTGTTTTAATGATCTAAGACAGTTTTTATCATTCTTCTCAAGCAATTCTCATGAAGTTGATTGGAAATCCTTGAAATCAATCTTGGCATCTCATATTAAATCTGCTGGGTTTATTTATTTTTATTTTTTTGTGTATAATGATGCTTGAGAATAGCATCTACCTGTCTAATTACCTTGTGGAAGTTCTTCCCAATGCTGTATTTTTTCAAGCTTGCAGAAATATGTGGCAAAAATTAGTGTAGCTCTTTTCACTAATCTAGCATAAGAAATGTCCAATTGATGGTTTAATTTTACTCTTTGAAAAGTTTAGTATCAATTATGGGCGCCTTAATAAAAATGTTGTTTCTTGTTTCAAAAAAAAATTATGAATATTTTCTTTTATGATTAATCCATTGAGGTATTTTTCAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGTTAGATGAGGAGTACTGTCCAGAGGAAACTAATGTAGAAATAAGCAAGATTGCTGCAAATTCGTACTACTATTCTTTGTTAGAAAAGATTACGGATCTAGGCGATATTTTGTTGAATATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAACTGTTTCTCTACCCTTCCATTTTCAAAGTTTATTACTAATTAATTTGTCTCTTTGGCTTTTCTTTCTTATGAGTAGCTCATCTATTGTCAGATCTGTATTTCTGTACAAACAATTCATGTAATGCTCTTGTTCCTCAATGACAAAGCAACTTTCTGTGACTAAGTATGGATGTTCCATTTCCAAACACCAGATCTTGCATCGTTTCTCTTGCCAGGTTAGCTGTAGGTAAAAGTATTGTTTCTTCTATTGTATTTTATGCTTTTTTAGTACAAAAGGGATTGGGAGATTCGGCCGCAAATCTCGTGATTATTAATACATTATTATACTAGTTGAGTTATGCTGCGCTCCCTTTAGCTTCATTTGTATTTTATGTTCATATGGATCAAATACAATTCTATAGAAATGGAATTGTGCGTGTTGATTTTTGAGCTTGCTTTCTTTCTATTTTATAGTTATTGTTATTTGACCTCAACATTTGCCTTAGGAAAGGCATAGCACTTCCATAAGTGCTTATACTGAAGTGTCCTCAAGGAGTGGTGTGGTGGTCGAAAGCTTGGATTTTGAAGGTGTGTTTCCCTCAACGTCCTAGGTTCGAGATTCACTTATGACATTAATTTGTAGACATCTCTTGTGTCTCTATTCCTTCAATGCCTCTGATAGAATCTACCACACTATTTTATTAACTAAGATAAATCTCTCGAGAGGATCTCTCAAAGAGCCAGAGGACAAAGATGATAACTGAATAATCCTCCTAGTGACCTATCATATCCTATTTATAGTAATCATAGGATTTAACCTAATTTAGTAAATAGCCCTAATAAGGACCAAAAGCCCAATACAACTTAAATAGCTAAAACAGAATTATATTAAAAATAATAATAAAATAGATCCGTCACTTCTTGGTCCGCCTTGAATAAACTTTCAATGATCTCGGGATCGTATCAGCCTCCCAGTGCCTGACCTAGGAGCGGACGTGGTTACTCCGCACATAGTGGAGTAAAGCTTTGATTTCACGATATAAAAAAAAGTGCTTATACCGAAAAGTGCTTATACCGAAGGGCAATTAGCTAGGTTGTCCATTTGGTTCTTCAATGATACTCCTGTAGGTTTTTCAAGTATGTTGGCAAAATGACTTCTCATATGGCCTCAAATGGGAGGGCCAATCATAGGGGCTAGGGGCTTCTGTAATTACACCAGCTAACTTAGACTGGAGGAGTTTTTCCTACACCTCCTAGGCAGAAGATCTCTCTTCCCTTAAGCTTTGAGCTAATATTCTATTCTTTCTCTTATGAAAGTTTGTTTCTTGTACATATATAAAAATTCTGTTCTGAAATAATACAAATAAAGAATAAGTGCTATTGGGCTAGCATATCATATTTACATGCTACTCATGCAAGTTTGGAGTAGATCATTGGACTGAAAAGGAAGACGATACGAGCAACGATCGATATCAAATCTGCATTCTACTCATGCAAGTTTGGAGTGAATCACCGGACGAAAAAAAGGAAAGCGATACAAGCTTTACGGTTCAGTATGCACATATTAGCATATTTTCTCATTGTACAAACAGATATCAAAATGTAAGCTTAAAACAGGCACCTTTCAAATTCTCCACTGTGGCATTGTGGTTATGTTTATGCTGTATAAGCATCCTAGAGGCGAGTTCCGATTTCAACGATTCTTTAATGTCTTTCCTCATTAGCTATCTTTTGTTTATGGTAAATAGGAACTAAGTTTTTATGCTTATGGATGCCTCTCTACTTTTGCAGGCACTATCATCCAGTTGTTCACACAAGGTCTAGCAACTGGGTCAATGGAGAAGTTGGTGGATGTAAAAATGAGGCAAGGCCATTGAGTTTCTAGAAGATAATATTGGTTTATAATATTCTAGTTCGATTTAAAGGTAAGGGGCAGTTTCGTTAATAGAGGTTTGAAGTCTTCAAGGTACCTCCTTTGGTGGTCTTAAGTTTGAAACCTACTAAATTTAATTGTCAACTCCCTAGTTTTTTTTTTTATCGGATGGGATATGGGTGCCCTAAAGGTTTTTATTGAGCATGTTGGCCTCTATTCAATTATATTATGATGTGTTTAAACTTTTCGGACTTGACCTAGTGATCACAATGAACTTGTGGAACTATAATTTTATAAATATTTTTGTTGGCAA

mRNA sequence

GGAAAATCCTGCTAGCTGAGTGGTCGCTATATATTTCATTGGACCTTACAGACGAATCCTATCCACACATCACCATCGCTCTGCCATCAACTTCTACACCAATCTCAAAATCACAGAGAAACCGAACGAAAATGGAGTCTCTGATCTTGGTTCCAGCCAGTACATGCGTTTCAATCACAAATTCCTCACAATTTTGCTCCGATTTCGCCATTCCATTCGCTTCTAGAATCCGCGCCCTCAACTTCAGAGCTTCTTCGCCGCAGTTTCTCCACTGCAATGGCTTCCGGCAGGGTCGATTAGCTTCAAGGTCTTATGTGCGGTATGGTCCGCCGTACGGTGAGGAAGACGACGACCCTGAAGCGCAGGTTCAAAGCCTTAGGGTTCCTGACGATTGGTCAGTTCCGTCCAAGGCGTTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGTTAGATGAGGAGTACTGTCCAGAGGAAACTAATGTAGAAATAAGCAAGATTGCTGCAAATTCGTACTACTATTCTTTGTTAGAAAAGATTACGGATCTAGGCGATATTTTGTTGAATATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAACTGTTTCTCTACCCTTCCATTTTCAAAGTTTATTACTAATTAATTTGTCTCTTTGGCTTTTCTTTCTTATGAGTAGCTCATCTATTGTCAGATCTGTATTTCTGTACAAACAATTCATGTAATGCTCTTGTTCCTCAATGACAAAGCAACTTTCTGTGACTAAGTATGGATGTTCCATTTCCAAACACCAGATCTTGCATCGTTTCTCTTGCCAGGTTAGCTGTAGGTAAAAGTATTGTTTCTTCTATTGTATTTTATGCTTTTTTAGTACAAAAGGGATTGGGAGATTCGGCCGCAAATCTCGTGATTATTAATACATTATTATACTAGTTGAGTTATGCTGCGCTCCCTTTAGCTTCATTTGTATTTTATGTTCATATGGATCAAATACAATTCTATAGAAATGGAATTGTGCGTGTTGATTTTTGAGCTTGCTTTCTTTCTATTTTATAGTTATTGTTATTTGACCTCAACATTTGCCTTAGGAAAGGCATAGCACTTCCATAAGTGCTTATACTGAAGTGTCCTCAAGGAGTGGTGTGGTGGTCGAAAGCTTGGATTTTGAAGGTGTGTTTCCCTCAACGTCCTAGGTTCGAGATTCACTTATGACATTAATTTGTAGACATCTCTTGTGTCTCTATTCCTTCAATGCCTCTGATAGAATCTACCACACTATTTTATTAACTAAGATAAATCTCTCGAGAGGATCTCTCAAAGAGCCAGAGGACAAAGATGATAACTGAATAATCCTCCTAGTGACCTATCATATCCTATTTATAGTAATCATAGGATTTAACCTAATTTAGTAAATAGCCCTAATAAGGACCAAAAGCCCAATACAACTTAAATAGCTAAAACAGAATTATATTAAAAATAATAATAAAATAGATCCGTCACTTCTTGGTCCGCCTTGAATAAACTTTCAATGATCTCGGGATCGTATCAGCCTCCCAGTGCCTGACCTAGGAGCGGACGTGGTTACTCCGCACATAGTGGAGTAAAGCTTTGATTTCACGATATAAAAAAAAGTGCTTATACCGAAAAGTGCTTATACCGAAGGGCAATTAGCTAGGTTGTCCATTTGGTTCTTCAATGATACTCCTGTAGGTTTTTCAAGTATGTTGGCAAAATGACTTCTCATATGGCCTCAAATGGGAGGGCCAATCATAGGGGCTAGGGGCTTCTGTAATTACACCAGCTAACTTAGACTGGAGGAGTTTTTCCTACACCTCCTAGGCAGAAGATCTCTCTTCCCTTAAGCTTTGAGCTAATATTCTATTCTTTCTCTTATGAAAGTTTGTTTCTTGTACATATATAAAAATTCTGTTCTGAAATAATACAAATAAAGAATAAGTGCTATTGGGCTAGCATATCATATTTACATGCTACTCATGCAAGTTTGGAGTAGATCATTGGACTGAAAAGGAAGACGATACGAGCAACGATCGATATCAAATCTGCATTCTACTCATGCAAGTTTGGAGTGAATCACCGGACGAAAAAAAGGAAAGCGATACAAGCTTTACGGTTCAGTATGCACATATTAGCATATTTTCTCATTGTACAAACAGATATCAAAATGTAAGCTTAAAACAGGCACCTTTCAAATTCTCCACTGTGGCATTGTGGTTATGTTTATGCTGTATAAGCATCCTAGAGGCACTATCATCCAGTTGTTCACACAAGGTCTAGCAACTGGGTCAATGGAGAAGTTGGTGGATGTAAAAATGAGGCAAGGCCATTGAGTTTCTAGAAGATAATATTGGTTTATAATATTCTAGTTCGATTTAAAGGTAAGGGGCAGTTTCGTTAATAGAGGTTTGAAGTCTTCAAGGTACCTCCTTTGGTGGTCTTAAGTTTGAAACCTACTAAATTTAATTGTCAACTCCCTAGTTTTTTTTTTTATCGGATGGGATATGGGTGCCCTAAAGGTTTTTATTGAGCATGTTGGCCTCTATTCAATTATATTATGATGTGTTTAAACTTTTCGGACTTGACCTAGTGATCACAATGAACTTGTGGAACTATAATTTTATAAATATTTTTGTTGGCAA

Coding sequence (CDS)

ATGGAGTCTCTGATCTTGGTTCCAGCCAGTACATGCGTTTCAATCACAAATTCCTCACAATTTTGCTCCGATTTCGCCATTCCATTCGCTTCTAGAATCCGCGCCCTCAACTTCAGAGCTTCTTCGCCGCAGTTTCTCCACTGCAATGGCTTCCGGCAGGGTCGATTAGCTTCAAGGTCTTATGTGCGGTATGGTCCGCCGTACGGTGAGGAAGACGACGACCCTGAAGCGCAGGTTCAAAGCCTTAGGGTTCCTGACGATTGGTCAGTTCCGTCCAAGGCGTTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGTTAGATGAGGAGTACTGTCCAGAGGAAACTAATGTAGAAATAAGCAAGATTGCTGCAAATTCGTACTACTATTCTTTGTTAGAAAAGATTACGGATCTAGGCGATATTTTGTTGAATATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAGAATAGAGCTGTCTTAA

Protein sequence

MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRSYVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

Homology

[Close]

BLAST of Sed0025615.3 vs. NCBI nr
Match: XP_038896861.1 (uncharacterized protein LOC120085084 [Benincasa hispida] >XP_038896862.1 uncharacterized protein LOC120085084 [Benincasa hispida] >XP_038896863.1 uncharacterized protein LOC120085084 [Benincasa hispida] >XP_038896864.1 uncharacterized protein LOC120085084 [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 3.9e-77
Identity = 149/182 (81.87%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLIL+PAS  V ITNSS FCS F+IPF SR RA+NF+   PQ LHCNG R  +   RS
Sbjct: 1   MESLILIPASKHVPITNSSLFCSGFSIPFTSRKRAINFQPCCPQILHCNGLRHAQATPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+  GPPYGEEDDDPE QV+SLRVPDDWSVPSKALEESEWLR TLHKWLD+EYCPEETNV
Sbjct: 61  YIGNGPPYGEEDDDPELQVESLRVPDDWSVPSKALEESEWLRATLHKWLDDEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AANSYY SLL+K TDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 182

[Close]

BLAST of Sed0025615.3 vs. NCBI nr
Match: XP_022150155.1 (uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150156.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150157.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150158.1 uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150159.1 uncharacterized protein LOC111018405 [Momordica charantia])

HSP 1 Score: 297.7 bits (761), Expect = 6.6e-77
Identity = 147/182 (80.77%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLIL+PAS  VS++NSS FCSDF +PF +  RA+NFRAS PQ LH NG R  +   RS
Sbjct: 1   MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y RYGPPYGEEDDDPE QV+SLRVPDDWSVP+KALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EIS++AANSYY SLLEK TDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IE
Sbjct: 121 EISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFXSANAAVNLIAQKIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 182

[Close]

BLAST of Sed0025615.3 vs. NCBI nr
Match: XP_023004672.1 (uncharacterized protein LOC111497897 [Cucurbita maxima] >XP_023004673.1 uncharacterized protein LOC111497897 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-75
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLILVP+S  VSITNSS F SDF++ F SR R +NFRASSPQ L CN F + RL  RS
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRGMNFRASSPQILPCNVFLE-RLTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEWLRVTLHKWLDEEYCPEETNV
Sbjct: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 181

[Close]

BLAST of Sed0025615.3 vs. NCBI nr
Match: XP_023515033.1 (uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 8.1e-75
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLILVP+S  VSITNSS F SDF++ F SR RA+NFRASSPQ L CN   + RL  RS
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEWLRVTLHKWLDEEYCPEETNV
Sbjct: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 181

[Close]

BLAST of Sed0025615.3 vs. NCBI nr
Match: XP_022959936.1 (uncharacterized protein LOC111460840 [Cucurbita moschata] >XP_022959937.1 uncharacterized protein LOC111460840 [Cucurbita moschata])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 150/182 (82.42%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLILVP+S  VSITNSS F SDF + F SR RA+NFRASSPQ L CN   + RL  RS
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEWLRVTLHKWLDEEYCPEETNV
Sbjct: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 181

[Close]

BLAST of Sed0025615.3 vs. ExPASy TrEMBL
Match: A0A6J1D9Y8 (uncharacterized protein LOC111018405 OS=Momordica charantia OX=3673 GN=LOC111018405 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 147/182 (80.77%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLIL+PAS  VS++NSS FCSDF +PF +  RA+NFRAS PQ LH NG R  +   RS
Sbjct: 1   MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y RYGPPYGEEDDDPE QV+SLRVPDDWSVP+KALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EIS++AANSYY SLLEK TDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IE
Sbjct: 121 EISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFXSANAAVNLIAQKIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 182

[Close]

BLAST of Sed0025615.3 vs. ExPASy TrEMBL
Match: A0A6J1KR31 (uncharacterized protein LOC111497897 OS=Cucurbita maxima OX=3661 GN=LOC111497897 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLILVP+S  VSITNSS F SDF++ F SR R +NFRASSPQ L CN F + RL  RS
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFSVQFTSRKRGMNFRASSPQILPCNVFLE-RLTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEWLRVTLHKWLDEEYCPEETNV
Sbjct: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 181

[Close]

BLAST of Sed0025615.3 vs. ExPASy TrEMBL
Match: A0A6J1H695 (uncharacterized protein LOC111460840 OS=Cucurbita moschata OX=3662 GN=LOC111460840 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.7e-75
Identity = 150/182 (82.42%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLILVP+S  VSITNSS F SDF + F SR RA+NFRASSPQ L CN   + RL  RS
Sbjct: 1   MESLILVPSSRHVSITNSSAFSSDFKVQFTSRKRAMNFRASSPQILPCNVVLE-RLTPRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+RYGPPYG++DDDPE QV+SLRVPD WSVPSKALEESEWLRVTLHKWLDEEYCPEETNV
Sbjct: 61  YIRYGPPYGDQDDDPEEQVESLRVPDAWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AA SYY SLLEK T+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAAKSYYNSLLEKRTELADILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 181

[Close]

BLAST of Sed0025615.3 vs. ExPASy TrEMBL
Match: A0A1S3BS97 (uncharacterized protein LOC103492727 OS=Cucumis melo OX=3656 GN=LOC103492727 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72
Identity = 143/182 (78.57%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLIL+P S  VSITNSS F   F+  F+SR RA+NF    PQ LH NG    +  SRS
Sbjct: 1   MESLILIPPSKHVSITNSSAFSFHFSSQFSSRKRAINFPQFCPQTLHSNGRWHAQTTSRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+R GPPYGEEDDDPE +V+SLRVPD+WSVPSKALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YIRNGPPYGEEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AANSYY SLL+K TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAANSYYNSLLKKTTDLGEILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 182

[Close]

BLAST of Sed0025615.3 vs. ExPASy TrEMBL
Match: A0A5D3D403 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002040 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72
Identity = 143/182 (78.57%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MESLILVPASTCVSITNSSQFCSDFAIPFASRIRALNFRASSPQFLHCNGFRQGRLASRS 60
           MESLIL+P S  VSITNSS F   F+  F+SR RA+NF    PQ LH NG    +  SRS
Sbjct: 1   MESLILIPPSKHVSITNSSAFSFHFSSQFSSRKRAINFPQFCPQTLHSNGRWHAQTTSRS 60

Query: 61  YVRYGPPYGEEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNV 120
           Y+R GPPYGEEDDDPE +V+SLRVPD+WSVPSKALEESEWLRVTLHKWLD+EYCPEETNV
Sbjct: 61  YIRNGPPYGEEDDDPELEVESLRVPDEWSVPSKALEESEWLRVTLHKWLDDEYCPEETNV 120

Query: 121 EISKIAANSYYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180
           EISK+AANSYY SLL+K TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
Sbjct: 121 EISKVAANSYYNSLLKKTTDLGEILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 180

Query: 181 LS 183
           LS
Sbjct: 181 LS 182

[Close]

BLAST of Sed0025615.3 vs. TAIR 10
Match: AT4G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 77/111 (69.37%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 70  EEDDDPEAQVQSLRVPDDWSVPSKALEESEWLRVTLHKWLDEEYCPEETNVEISKIAANS 129
           E ++D E+ VQ+L +P++W +PS+A+EESEWLRVTLHKWLD+EYCPE TNVEIS++AA S
Sbjct: 71  EGEEDSESAVQALTIPEEWLLPSRAIEESEWLRVTLHKWLDDEYCPEPTNVEISEVAAKS 130

Query: 130 YYYSLLEKITDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE 181
           YY SLLEK +D+G+ILL MA++L SISY+ESFHGAF+SANAA+NLI  RIE
Sbjct: 131 YYSSLLEKESDMGEILLKMAQDLTSISYQESFHGAFTSANAAINLIVDRIE 181

The following BLAST results are available for this feature:

BLAST of Sed0025615.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896861.1	3.9e-77	81.87	uncharacterized protein LOC120085084 [Benincasa hispida] >XP_038896862.1 unchara...	[more]
XP_022150155.1	6.6e-77	80.77	uncharacterized protein LOC111018405 [Momordica charantia] >XP_022150156.1 uncha...	[more]
XP_023004672.1	3.6e-75	82.42	uncharacterized protein LOC111497897 [Cucurbita maxima] >XP_023004673.1 uncharac...	[more]
XP_023515033.1	8.1e-75	82.42	uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo]	[more]
XP_022959936.1	1.4e-74	82.42	uncharacterized protein LOC111460840 [Cucurbita moschata] >XP_022959937.1 unchar...	[more]

BLAST of Sed0025615.3 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025615.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9Y8	3.2e-77	80.77	uncharacterized protein LOC111018405 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1KR31	1.8e-75	82.42	uncharacterized protein LOC111497897 OS=Cucurbita maxima OX=3661 GN=LOC111497897...	[more]
A0A6J1H695	6.7e-75	82.42	uncharacterized protein LOC111460840 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A1S3BS97	6.9e-72	78.57	uncharacterized protein LOC103492727 OS=Cucumis melo OX=3656 GN=LOC103492727 PE=...	[more]
A0A5D3D403	6.9e-72	78.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0025615.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03150.1	1.6e-41	69.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36776	EXPRESSED PROTEIN	coord: 12..181

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0025615	Sed0025615	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025615.3-three_prime_utr	Sed0025615.3-three_prime_utr-LG09:36125874..36126268	three_prime_UTR
Sed0025615.3-three_prime_utr	Sed0025615.3-three_prime_utr-LG09:36126380..36128038	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025615.3-exon	Sed0025615.3-exon-LG09:36125874..36126268	exon
Sed0025615.3-exon	Sed0025615.3-exon-LG09:36126380..36128299	exon
Sed0025615.3-exon	Sed0025615.3-exon-LG09:36130165..36130583	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025615.3-cds	Sed0025615.3-cds-LG09:36128039..36128299	CDS
Sed0025615.3-cds	Sed0025615.3-cds-LG09:36130165..36130452	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025615.3-five_prime_utr	Sed0025615.3-five_prime_utr-LG09:36130453..36130583	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0025615.3	Sed0025615.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003855	3-dehydroquinate dehydratase activity
molecular_function	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity